rna-XM_014652745.2
Transcript Overview
References
External references for this mRNA
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of rna-XM_014652745.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3UQ94|A0A1S3UQ94_VIGRR (uncharacterized protein LOC106767793 OS=Vigna radiata var. radiata OX=3916 GN=LOC106767793 PE=4 SV=1) HSP 1 Score: 284.648 bits (727), Expect = 4.532e-97 Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0 Query: 1 MKPFVVFLLILSLLLAQTQGTRLGKVSLPVQQQKQQDEESTLLKRSNFDAEETVLCRDNECTGKLKNRKLVTTSISSTQSLPKDVEESKAEDLVNGNTKNVNTLSSWNQKDVPEEHSHDLVEITEMDYSPAKRKPPIHN 139 MKPFVVFLLILSLLLAQTQGTRLGKVSLPVQQQKQQDEESTLLKRSNFDAEETVLCRDNECTGKLKNRKLVTTSISSTQSLPKDVEESKAEDLVNGNTKNVNTLSSWNQKDVPEEHSHDLVEITEMDYSPAKRKPPIHN Sbjct: 1 MKPFVVFLLILSLLLAQTQGTRLGKVSLPVQQQKQQDEESTLLKRSNFDAEETVLCRDNECTGKLKNRKLVTTSISSTQSLPKDVEESKAEDLVNGNTKNVNTLSSWNQKDVPEEHSHDLVEITEMDYSPAKRKPPIHN 139
BLAST of rna-XM_014652745.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3R6H6|A0A0S3R6H6_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.01G422700 PE=4 SV=1) HSP 1 Score: 260.381 bits (664), Expect = 1.863e-87 Identity = 127/139 (91.37%), Postives = 133/139 (95.68%), Query Frame = 0 Query: 1 MKPFVVFLLILSLLLAQTQGTRLGKVSLPVQQQKQQDEESTLLKRSNFDAEETVLCRDNECTGKLKNRKLVTTSISSTQSLPKDVEESKAEDLVNGNTKNVNTLSSWNQKDVPEEHSHDLVEITEMDYSPAKRKPPIHN 139 MK FVVFL+ILSLLLAQTQGTRLGKVSLPVQQQKQQD ESTLLKRSN DAEETVLC+DNECTGKLKNRKLVT SIS+TQSLPK+VEESKAED VNG+TK VNTLSSWNQKDVPEEH+HDLVEITEMDYSPAKRKPPIHN Sbjct: 1 MKSFVVFLVILSLLLAQTQGTRLGKVSLPVQQQKQQDGESTLLKRSNTDAEETVLCKDNECTGKLKNRKLVTASISTTQSLPKNVEESKAEDSVNGSTKKVNTLSSWNQKDVPEEHNHDLVEITEMDYSPAKRKPPIHN 139
BLAST of rna-XM_014652745.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9TR46|A0A0L9TR46_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan01g250200 PE=4 SV=1) HSP 1 Score: 260.381 bits (664), Expect = 1.863e-87 Identity = 127/139 (91.37%), Postives = 133/139 (95.68%), Query Frame = 0 Query: 1 MKPFVVFLLILSLLLAQTQGTRLGKVSLPVQQQKQQDEESTLLKRSNFDAEETVLCRDNECTGKLKNRKLVTTSISSTQSLPKDVEESKAEDLVNGNTKNVNTLSSWNQKDVPEEHSHDLVEITEMDYSPAKRKPPIHN 139 MK FVVFL+ILSLLLAQTQGTRLGKVSLPVQQQKQQD ESTLLKRSN DAEETVLC+DNECTGKLKNRKLVT SIS+TQSLPK+VEESKAED VNG+TK VNTLSSWNQKDVPEEH+HDLVEITEMDYSPAKRKPPIHN Sbjct: 1 MKSFVVFLVILSLLLAQTQGTRLGKVSLPVQQQKQQDGESTLLKRSNTDAEETVLCKDNECTGKLKNRKLVTASISTTQSLPKNVEESKAEDSVNGSTKKVNTLSSWNQKDVPEEHNHDLVEITEMDYSPAKRKPPIHN 139
BLAST of rna-XM_014652745.2 vs. UniProtKB/TrEMBL
Match: tr|V7CCL8|V7CCL8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_003G173600g PE=4 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 1.984e-70 Identity = 118/142 (83.10%), Postives = 131/142 (92.25%), Query Frame = 0 Query: 1 MKP-FVVFLLILSLLLAQTQGTRLGKVSLPVQQQKQQDEESTLLKRSNFDAEE-TVLC-RDNECTGKLKNRKLVTTSISSTQSLPKDVEESKAEDLVNGNTKNVNTLSSWNQKDVPEEHSHDLVEITEMDYSPAKRKPPIHN 139 MKP FV+FLL+LSLLLAQTQG RLGKVSLPVQQQKQQ+ ESTLLKRSN DAEE TVLC +D ECTGKLKNRKLVTTS+S+TQSL K+VEESKAEDLVN N++NVNT+ SW QK+VPEEH+H+LVEITEMDYSPAKRKPPIHN Sbjct: 1 MKPSFVIFLLLLSLLLAQTQGIRLGKVSLPVQQQKQQNGESTLLKRSNTDAEEETVLCNKDKECTGKLKNRKLVTTSVSTTQSLSKNVEESKAEDLVNENSRNVNTVRSWKQKNVPEEHNHELVEITEMDYSPAKRKPPIHN 142
BLAST of rna-XM_014652745.2 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6KR91|A0A4D6KR91_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG2g888 PE=4 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 2.119e-70 Identity = 118/140 (84.29%), Postives = 127/140 (90.71%), Query Frame = 0 Query: 1 MKPFVVFLLILSLLLAQTQGTRLGKVSLPVQQQKQQDEESTLLKRSNFDAEETV-LCRDNECTGKLKNRKLVTTSISSTQSLPKDVEESKAEDLVNGNTKNVNTLSSWNQKDVPEEHSHDLVEITEMDYSPAKRKPPIHN 139 MKPFVVFLLILSLLLAQTQG RLGKVS P+QQQKQQD E +LLKRSN DAEETV LC+DNECTGKLKNRKLV TSIS+T+SL K+VEESK E+LVNG +NVNTL SW QKDVPEEH+HDLVEITEMDYSPAKRKPPIHN Sbjct: 1 MKPFVVFLLILSLLLAQTQGIRLGKVSSPLQQQKQQDGEFSLLKRSNTDAEETVLLCKDNECTGKLKNRKLVATSISTTKSLSKNVEESKGEELVNG--RNVNTLRSWKQKDVPEEHNHDLVEITEMDYSPAKRKPPIHN 138
BLAST of rna-XM_014652745.2 vs. UniProtKB/TrEMBL
Match: tr|A0A371EF02|A0A371EF02_MUCPR (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_56805 PE=4 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 6.809e-67 Identity = 110/144 (76.39%), Postives = 119/144 (82.64%), Query Frame = 0 Query: 1 MKP-FVVF--LLILSLLLAQTQGTRLGKVSLPVQQQKQQDEESTLLKRSNFDAEETVLCRDNECTGKLKNRKLVTTSISSTQSLPKDV--EESKAEDLVNGNTKNVNTLSSWNQKDVPEEHSHDLVEITEMDYSPAKRKPPIHN 139 MKP FVV LLI SLLLA+ QG RLGKVSL VQ QKQ D ESTLLKRS +AEE VLC+DNECTGK+KNRKLVT S+S+TQSL K+V EE K + VNGNT+NVNTLSS QKDVPEEH HDLVEITEMDYSPAKRKPPIHN Sbjct: 41 MKPSFVVLVSLLIFSLLLAKAQGIRLGKVSLAVQLQKQHDVESTLLKRSKNEAEEAVLCKDNECTGKIKNRKLVTASVSTTQSLSKNVKKEEYKVDPSVNGNTRNVNTLSSSKQKDVPEEHYHDLVEITEMDYSPAKRKPPIHN 184
BLAST of rna-XM_014652745.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445I5V6|A0A445I5V6_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_030904 PE=4 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 2.865e-61 Identity = 105/140 (75.00%), Postives = 116/140 (82.86%), Query Frame = 0 Query: 1 MKP-FVVFLLILSLLLAQTQGTRLGKVSLPVQQQKQQDEESTLLKRSNFDAEETVLCRDNECTGKLKNRKLVTTSISSTQSLPKDVEESKAEDLVNGNTKNVNTLSSWNQKDVPEEHSHDLVEITEMDYSPAKRKPPIHN 139 MKP FVV LL+LSLLLA+TQG RLGKVS VQQQKQ D ESTLLKRS+ D EE LC+DN CTG +KNRKLV T +S+ QSL K+VEESK + VNGNT+NVNTLS+ KDVPEEH HDLVEITEMDYSPAKRKPPIHN Sbjct: 1 MKPSFVVSLLLLSLLLAKTQGIRLGKVSSAVQQQKQHDGESTLLKRSSTDTEEASLCKDNACTGNIKNRKLVNTPVSTAQSLSKNVEESKVDPSVNGNTRNVNTLSTSKHKDVPEEHYHDLVEITEMDYSPAKRKPPIHN 140
BLAST of rna-XM_014652745.2 vs. UniProtKB/TrEMBL
Match: tr|I1LZW1|I1LZW1_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100782109 PE=4 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 2.865e-61 Identity = 105/140 (75.00%), Postives = 116/140 (82.86%), Query Frame = 0 Query: 1 MKP-FVVFLLILSLLLAQTQGTRLGKVSLPVQQQKQQDEESTLLKRSNFDAEETVLCRDNECTGKLKNRKLVTTSISSTQSLPKDVEESKAEDLVNGNTKNVNTLSSWNQKDVPEEHSHDLVEITEMDYSPAKRKPPIHN 139 MKP FVV LL+LSLLLA+TQG RLGKVS VQQQKQ D ESTLLKRS+ D EE LC+DN CTG +KNRKLV T +S+ QSL K+VEESK + VNGNT+NVNTLS+ KDVPEEH HDLVEITEMDYSPAKRKPPIHN Sbjct: 1 MKPSFVVSLLLLSLLLAKTQGIRLGKVSSAVQQQKQHDGESTLLKRSSTDTEEASLCKDNACTGNIKNRKLVNTPVSTAQSLSKNVEESKVDPSVNGNTRNVNTLSTSKHKDVPEEHYHDLVEITEMDYSPAKRKPPIHN 140
BLAST of rna-XM_014652745.2 vs. UniProtKB/TrEMBL
Match: tr|I1MU04|I1MU04_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100785198 PE=4 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 5.215e-59 Identity = 103/141 (73.05%), Postives = 118/141 (83.69%), Query Frame = 0 Query: 1 MKP-FVVFLLILSLLLAQTQGTRLGKVSLPVQQQKQQDEESTLLKRSNFDAEETVLCRDNE-CTGKLKNRKLVTTSISSTQSLPKDVEESKAEDLVNGNTKNVNTLSSWNQKDVPEEHSHDLVEITEMDYSPAKRKPPIHN 139 MKP FVV LL+LSL+LA+TQG RLGKVS VQQQKQ D E+TLLKRSN AEE LC++NE CTG +KNRKLVT +S+TQSL K+VEESK + VNGN++NV+TLS+ KDVPEEH HDLVEITEMDYSPAKRKPPIHN Sbjct: 1 MKPSFVVSLLLLSLILAKTQGIRLGKVSSAVQQQKQHDGETTLLKRSNTGAEEASLCKENELCTGNIKNRKLVTIPVSATQSLSKNVEESKVDPSVNGNSRNVDTLSTSKHKDVPEEHYHDLVEITEMDYSPAKRKPPIHN 141
BLAST of rna-XM_014652745.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445G523|A0A445G523_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_045461 PE=4 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 6.709e-59 Identity = 103/141 (73.05%), Postives = 118/141 (83.69%), Query Frame = 0 Query: 1 MKP-FVVFLLILSLLLAQTQGTRLGKVSLPVQQQKQQDEESTLLKRSNFDAEETVLCRDNE-CTGKLKNRKLVTTSISSTQSLPKDVEESKAEDLVNGNTKNVNTLSSWNQKDVPEEHSHDLVEITEMDYSPAKRKPPIHN 139 MKP FVV LL+LSL+LA+TQG RLGKVS VQQQKQ D E+TLLKRSN AEE LC++NE CTG +KNRKLVT +S+TQSL K+VEESK + VNGN++NV+TLS+ KDVPEEH HDLVEITEMDYSPAKRKPPIHN Sbjct: 1 MKPSFVVSLLLLSLILAKTQGIRLGKVSSAVQQQKQHDGETTLLKRSNTGAEEASLCKENELCTGNIKNRKLVTIPVSTTQSLSKNVEESKVDPSVNGNSRNVDTLSTSKHKDVPEEHYHDLVEITEMDYSPAKRKPPIHN 141 The following BLAST results are available for this feature:
BLAST of rna-XM_014652745.2 vs.
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot) Total hits: 0
BLAST of rna-XM_014652745.2 vs.
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11) Total hits: 0
BLAST of rna-XM_014652745.2 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0
Date Performed: 2023-06-20
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-XM_014652745.2_VrVC1973A-SNU_v1 ID=rna-XM_014652745.2_VrVC1973A-SNU_v1; Name=rna-XM_014652745.2; organism=Vigna radiata; type=mRNA; length=420bpback to top protein sequence of rna-XM_014652745.2_VrVC1973A-SNU_v1 >rna-XM_014652745.2_VrVC1973A-SNU_v1 ID=rna-XM_014652745.2_VrVC1973A-SNU_v1; Name=rna-XM_014652745.2_VrVC1973A-SNU_v1; organism=Vigna radiata; type=polypeptide; length=139bpback to top mRNA from alignment at chr07:43431508..43433010+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>rna-XM_014652745.2_VrVC1973A-SNU_v1 ID=rna-XM_014652745.2_VrVC1973A-SNU_v1; Name=rna-XM_014652745.2; organism=Vigna radiata; type=mRNA; length=1503bp; location=Sequence derived from: chr07:43431508..43433010+ (Vigna radiataback to top Coding sequence (CDS) from alignment at chr07:43431508..43433010+ >rna-XM_014652745.2_VrVC1973A-SNU_v1 ID=rna-XM_014652745.2_VrVC1973A-SNU_v1; Name=rna-XM_014652745.2; organism=Vigna radiata; type=CDS; length=420bp; location=Sequence derived from: chr07:43431508..43433010+ (Vigna radiataback to top |