rna-XM_014655175.2

Transcript Overview
Namerna-XM_014655175.2
Unique Namerna-XM_014655175.2_VrVC1973A-SNU_v1
TypemRNA
OrganismVigna radiata (Mung bean, green gram)
Sequence length1095
Productgeranylgeranyl pyrophosphate synthase, chloroplastic
References
External references for this mRNA
DatabaseAccession
GeneID106769524
GenbankXM_014655175.2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr07chromosomechr07:946323..947787 -Vigna radiata cv. VC1973A genome v6.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
asvrvL070Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anvrvL0484Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL0519Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvrvL602Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anvrvL0958Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
cavrvL650Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavrvL693Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvrvL1007Cajanus cajan Asha genome v1.0Cajanus cajan
crvrvL814Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
psvrvL154Pisum sativum Cameor genome v1aPisum sativum
psvrvL295Pisum sativum Cameor genome v1aPisum sativum
pvvrvL243Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvrvL328Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
tifvrvL088Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvrvL526Vicia faba cv. Tiffany genome v1.0Vicia faba
vrvvrvL057Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvrvL534Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvssR705Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvuaR455Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvzwsR547Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvvuaR465Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvvuR490Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vrvvuR518Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canvrvL610Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvrvL655Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvrvL232Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvrvL554Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvrvL615Cicer arietinum
carvrvL669Cicer arietinum
ccavrvL184Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavrvL529Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vrvvumR518Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvumR552Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvvaR599Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvvaR643Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvstR520Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vrvvstR541Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvrvL077Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvrvL129Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvrvL229Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvrvL306Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vrvvunR461Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vrvvunR486Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
rna-XM_004509182.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Vigun02g135600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vigun02g135600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigan.01G336900.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Psat2g162240.1Pisum sativum Cameor genome v1aPisum sativum
Vigun03g269100.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
evm.model.Chr02.1342Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
rna-XM_004511950.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Cc_v2.0_14169.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vfaba.Tiffany.R1.1g294760.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Cr_20461.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
PvulFLAVERTChr03.1001465Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Cc_v2.0_26380.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
rna-KK1_013022Cajanus cajan Asha genome v1.0Cajanus cajan
evm.model.Chr03.2661Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vum_01G02514.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Ca_16038Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Ca_02078Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vfaba.Tiffany.R1.4g092200.1Vicia faba cv. Tiffany genome v1.0Vicia faba
LR48_mrnaVigan06g041100Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-TanjilR_01039Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
PvulFLAVERTChr02.1000140Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
XM_058919762.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
XM_058914916.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vigst.10G114600.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Psat04G0278000-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
LR48_mrnaVigan01g187700Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Phvul.002G026400.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-TanjilR_07660Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigun03g269100.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigan.10G169800.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vum_10G01270.1Vigna umbellata FF25 genome v1.0Vigna umbellata
rna-TanjilR_22794Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vfaba.Hedin2.R1.4g120360.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Psat4g091240.1Pisum sativum Cameor genome v1aPisum sativum
Va01G073200.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vigst.01G229700.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Va06G010130.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
jg17004.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Phvul.003G251500.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-XM_014665620.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LOC106769524gene-LOC106769524_VrVC1973A-SNU_v1Vigna radiatagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_014655175.2-1exon-XM_014655175.2-1_VrVC1973A-SNU_v1Vigna radiataexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-XP_014510661.1cds-XP_014510661.1_VrVC1973A-SNU_v1Vigna radiataCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-XM_014655175.2_VrVC1973A-SNU_v1rna-XM_014655175.2_VrVC1973A-SNU_v1Vigna radiatapolypeptide
rna-XM_014655175.2_VrVC1973A-SNU_v1rna-XM_014655175.2_VrVC1973A-SNU_v1-proteinVigna radiatapolypeptide


Homology
[Close]
BLAST of rna-XM_014655175.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q94ID7|GGPPS_HEVBR (Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Hevea brasiliensis OX=3981 GN=GGPS PE=1 SV=1)

HSP 1 Score: 531.946 bits (1369), Expect = 0.000e+0
Identity = 264/373 (70.78%), Postives = 311/373 (83.38%), Query Frame = 0 
Query:    1 MSAVNFNAWLHPSFTRSRSPTFLFHG----LTNSPIPSFIVTKRQRDKLYSSSPFT-LSALLTKEDTVETQEK----PAFNFKSYMVQKADAVNQALDDAVPLREPLRIHEAMRYSLLAGGKRVRPVLCVAACELVGGAAATAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAGATVGASPPRIVRALGELARAIGAEGLVAGQVVDIKSEGLDDVGLERLEFIHLHKTAALLEGAVVLGAILGGGTDEEIEKLRKFARYIGLLFQVVDDILDITKSSQELGKTAGKDLAADKVTYPKLLGIEKSKEFAAKLNKDAQDQLSGFDPVKAAPLVALANYIAYRQN 364
            MS+VN  +W+H S+  +++           L  +P+ S  ++   R    S  P + +SA++TKE+    +E+    P+F+FKSYM+QK +++NQAL+ A+PL+EP +IHE+MRYSLLAGGKRVRP LC+AACELVGG  + AMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNH VFGEDVAVLAGDALLAFAFEHIA +T+  S  RIVRA+GELA+AIGAEGLVAGQVVDI SEG  +V LE+LEFIH+HKTA LLEGAVVLGAILGGGTDEE+EKLRK+AR IGLLFQVVDDILD+TKSSQELGKTAGKDL ADKVTYPKLLGIEKS+EFA KLNK+AQ+QL+GFDP KAAPL+ALANYIA+RQN
Sbjct:    1 MSSVNLGSWVHTSYVLNQATRSRSKSKSFSLPFNPLKSLAISFAYRK---SERPISSVSAIITKEEETLQEEQNNPPPSFDFKSYMLQKGNSINQALEAAIPLQEPAKIHESMRYSLLAGGKRVRPALCLAACELVGGNDSMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGEDVAVLAGDALLAFAFEHIAVSTLNVSSARIVRAVGELAKAIGAEGLVAGQVVDINSEGSSEVDLEKLEFIHIHKTAKLLEGAVVLGAILGGGTDEEVEKLRKYARDIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEKSREFAEKLNKEAQEQLAGFDPEKAAPLIALANYIAHRQN 370
[Close]
BLAST of rna-XM_014655175.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q42698|GGPPS_CATRO (Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Catharanthus roseus OX=4058 GN=GGPS1 PE=3 SV=1)

HSP 1 Score: 512.686 bits (1319), Expect = 0.000e+0
Identity = 253/353 (71.67%), Postives = 294/353 (83.29%), Query Frame = 0 
Query:   23 LFHGLTNSPIPSFIVTKRQRDKLYSSSPFTLSALLTKEDT-----------VETQEKPAFNFKSYMVQKADAVNQALDDAVPLREPLRIHEAMRYSLLAGGKRVRPVLCVAACELVGGAAATAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAGATVGASPPRIVRALGELARAIGAEGLVAGQVVDIKSEGLDDVGLERLEFIHLHKTAALLEGAVVLGAILGGGTDEEIEKLRKFARYIGLLFQVVDDILDITKSSQELGKTAGKDLAADKVTYPKLLGIEKSKEFAAKLNKDAQDQLSGFDPVKAAPLVALANYIAYRQN 364
            L H L N    SF ++   R  ++S S  ++SA++TKE T           V      +F+FK+YM+ KA++VN+AL+DAV +REPL+IHE+MRYSLLAGGKRVRP+LC+AACEL GG  + AMP+ACAVEMIHTMSL+HDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIA AT G S  RIVR +GELA+ IG+EGLVAGQVVD+ SEG+ DVGLE LEFIH+HKTAALLEG+VVLGAI+GG  DE+I KLRKFAR IGLLFQVVDDILD+TKSSQELGKTAGKDL ADKVTYPKLLGI+KS+EFA KLN++AQ+QL+ FDP KAAPL+ALANYIAYR N
Sbjct:    5 LCHPLKNQLPISFFLSGTIRKPIFSCSRLSISAIITKEQTQEESESKSKKEVAFSSSSSFDFKAYMIGKANSVNKALEDAVLVREPLKIHESMRYSLLAGGKRVRPMLCIAACELFGGTESVAMPSACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIATATKGVSSERIVRVVGELAKCIGSEGLVAGQVVDVCSEGIADVGLEHLEFIHIHKTAALLEGSVVLGAIVGGANDEQISKLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIDKSREFAEKLNREAQEQLAEFDPEKAAPLIALANYIAYRDN 357
[Close]
BLAST of rna-XM_014655175.2 vs. UniProtKB/Swiss-Prot
Match: sp|P34802|GGPP1_ARATH (Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GGPPS1 PE=1 SV=2)

HSP 1 Score: 510.375 bits (1313), Expect = 0.000e+0
Identity = 257/371 (69.27%), Postives = 303/371 (81.67%), Query Frame = 0 
Query:    1 MSAVNFNAWLHPSFTRSRSPTFLFHGLTNSPIPSFI---VTKRQRDKLYSSSPFTLSALLTKEDTVETQEKPAFNFKSYMVQKADAVNQALDDAVPLREPLRIHEAMRYSLLAGGKRVRPVLCVAACELVGGAAATAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAGATVG--ASPPRIVRALGELARAIGAEGLVAGQVVDIKSEGLD--DVGLERLEFIHLHKTAALLEGAVVLGAILGGGTDEEIEKLRKFARYIGLLFQVVDDILDITKSSQELGKTAGKDLAADKVTYPKLLGIEKSKEFAAKLNKDAQDQLSGFDPVKAAPLVALANYIAYRQN 364
            M++V   +W+         P+ +     +   P  +   ++ R +  + SSS    S+++TKED +   E  +F+F SY++ KA+ VN+ALD AVPLREPL+IHEAMRYSLLAGGKRVRPVLC+AACELVGG  +TAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALL+FAFEH+A AT     SP R+VRA+GELA+AIG EGLVAGQVVDI SEGLD  DVGLE LEFIHLHKTAALLE + VLGAI+GGG+D+EIE+LRKFAR IGLLFQVVDDILD+TKSS+ELGKTAGKDL ADK+TYPK++G+EKS+EFA KLN++A+DQL GFD  K APL+ALANYIAYRQN
Sbjct:    1 MASVTLGSWIVVHHHNHHHPSSILTKSRSRSCPITLTKPISFRSKRTVSSSSSIVSSSVVTKEDNLRQSEPSSFDFMSYIITKAELVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFAFEHLASATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFIHLHKTAALLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDVTKSSKELGKTAGKDLIADKLTYPKIMGLEKSREFAEKLNREARDQLLGFDSDKVAPLLALANYIAYRQN 371
[Close]
BLAST of rna-XM_014655175.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q43133|GGPPS_SINAL (Geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic OS=Sinapis alba OX=3728 GN=GGPS1 PE=1 SV=1)

HSP 1 Score: 501.516 bits (1290), Expect = 6.262e-178
Identity = 262/374 (70.05%), Postives = 301/374 (80.48%), Query Frame = 0 
Query:    2 SAVNFNAWL----HPSF----TRSRSPTFLFHGLTNSPIPSFIVTKRQRDKLYSSSPFTLSALLTKEDTVETQEKPAFNFKSYMVQKADAVNQALDDAVPLREPLRIHEAMRYSLLAGGKRVRPVLCVAACELVGGAAATAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAGATVG-ASPPRIVRALGELARAIGAEGLVAGQVVDIKSEGLD--DVGLERLEFIHLHKTAALLEGAVVLGAILGGGTDEEIEKLRKFARYIGLLFQVVDDILDITKSSQELGKTAGKDLAADKVTYPKLLGIEKSKEFAAKLNKDAQDQLSGFDPVKAAPLVALANYIAYRQN 364
            S     +W+    HPS     +RSRSP  L   +T  PI   +  KR      + S  + S+L+TKED        +F+F SY+++KAD+VN+ALD AVPLREPL+IHEAMRYSLLAGGKRVRPVLC+AACELVGG  + AMPA CAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKV+GEDVAVLAGDALL+FAFEH+A AT    SP R+VRA+GELA+AIG EGLVAGQVVDI SEGLD  +VGLE L+FIHLHKTAALLE + VLG I+GGG+DEEIE+LRKFAR IGLLFQVVDDILD+TKSSQELGKTAGKDL ADK+TYPKL+G+EKS+EFA KLN +A+DQL GFD  K APL+ALANYIA RQN
Sbjct:    4 SVTPLGSWVLLHHHPSTILTQSRSRSPPSL---ITLKPIS--LTPKR------TVSSSSSSSLITKEDNNLKSSSSSFDFMSYIIRKADSVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESLAMPARCAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDALLSFAFEHLASATSSEVSPARVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNNVGLEHLKFIHLHKTAALLEASAVLGGIIGGGSDEEIERLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGKDLIADKLTYPKLMGLEKSREFAEKLNTEARDQLLGFDSDKVAPLLALANYIANRQN 366
[Close]
BLAST of rna-XM_014655175.2 vs. UniProtKB/Swiss-Prot
Match: sp|P80042|GGPPS_CAPAN (Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Capsicum annuum OX=4072 GN=GGPS1 PE=3 SV=1)

HSP 1 Score: 475.322 bits (1222), Expect = 1.145e-167
Identity = 238/344 (69.19%), Postives = 280/344 (81.40%), Query Frame = 0 
Query:   24 FHGLTNSPIPSFIVTKRQRDKLYSSSPFTLSAL-LTKEDT-VET-QEKPAFNFKSYMVQKADAVNQALDDAVPLREPLRIHEAMRYSLLAGGKRVRPVLCVAACELVGGAAATAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAGATVGASPPRIVRALGELARAIGAEGLVAGQVVDIKSEGLDDVGLERLEFIHLHKTAALLEGAVVLGAILGGGTDEEIEKLRKFARYIGLLFQVVDDILDITKSSQELGKTAGKDLAADKVTYPKLLGIEKSKEFAAKLNKDAQDQLSGFDPVKAAPLVALANYIAYRQN 364
            F+G    P+ +  +  +   K    SP T+SA+  TKED  +E  Q +  FNFK Y+ +KA +VN+ALD+A+ ++EP  IHEAMRYSLLAGGKRVRP+LC+AACELVGG    AM AACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHK++GEDVAVLAGD+LLAFAFEHI  +T G +P RIV A+ ELA++IG EGLVAGQV DIK  G   V LE LEFIH+HKTAALLE +VVLGAILGGGT+ E+EKLR+FAR IGLLFQVVDDILD+TKSS+ELGKTAGKDL  DK TYPKLLG+EK+KEFAA+LN++A+ QL GFD  KAAPL+ALA+YIAYR N
Sbjct:   27 FNGFMKIPLKNSKINPKLNKK-RPFSPLTVSAIATTKEDERIEAAQTEEPFNFKIYVTEKAISVNKALDEAIIVKEPHVIHEAMRYSLLAGGKRVRPMLCLAACELVGGNQENAMAAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLAGDSLLAFAFEHIVNSTAGVTPSRIVGAVAELAKSIGTEGLVAGQVADIKCTGNASVSLETLEFIHVHKTAALLESSVVLGAILGGGTNVEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLVVDKTTYPKLLGLEKAKEFAAELNREAKQQLEGFDSRKAAPLIALADYIAYRDN 369
[Close]
BLAST of rna-XM_014655175.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9ZU77|GGPP7_ARATH (Geranylgeranyl pyrophosphate synthase 7, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g18620 PE=2 SV=1)

HSP 1 Score: 473.011 bits (1216), Expect = 4.418e-167
Identity = 237/343 (69.10%), Postives = 281/343 (81.92%), Query Frame = 0 
Query:   28 TNSPIPSFIVTKRQRDKLYSSSPFTLSALLTKEDTVETQEKPA----FNFKSYMVQKADAVNQALDDAVPLREPLRIHEAMRYSLLAGGKRVRPVLCVAACELVGGAAATAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAGATVGASPPRIVRALGELARAIGAEGLVAGQVVDIKSEGLD--DVGLERLEFIHLHKTAALLEGAVVLGAILGGGTDEEIEKLRKFARYIGLLFQVVDDILDITKSSQELGKTAGKDLAADKVTYPKLLGIEKSKEFAAKLNKDAQDQLSGFDPVKAAPLVALANYIAYRQN 364
            +++ IP FI  +          PF L   L+   +V  +++      F+F SYM+ KA+AVN+ALD AV LREP++IHEA+RYSLLA GKRVRPVLC+AACELVGG  + A+PAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDAL++FAFEH+A +T   SP R+VRA+GELA+AIG++GLVAGQVVD+ S G+D  DVGLE LEFIH+HKTA LLE A VLGAI+GGG+DEE+EKLR+FAR IGLLFQVVDDILD+TKSS+ELGKTAGKDL ADK+TYPKL+G+EKSK+FA KL  DA +QL GFD  +  PL+ALANYIA RQN
Sbjct:   16 SSASIPGFIKIQ----------PFLLRRKLSTVLSVTARDEGIIHNHFDFTSYMIGKANAVNEALDSAVSLREPIKIHEAIRYSLLARGKRVRPVLCIAACELVGGEESVALPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALISFAFEHLATST-AVSPARVVRAIGELAKAIGSKGLVAGQVVDLTSGGMDQNDVGLEVLEFIHVHKTAVLLEAATVLGAIVGGGSDEEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLIADKLTYPKLMGLEKSKDFADKLLSDAHEQLHGFDSSRVKPLLALANYIAKRQN 347
[Close]
BLAST of rna-XM_014655175.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LRR0|GGPP8_ARATH (Putative geranylgeranyl pyrophosphate synthase 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g14510 PE=5 SV=2)

HSP 1 Score: 419.083 bits (1076), Expect = 1.456e-145
Identity = 229/349 (65.62%), Postives = 279/349 (79.94%), Query Frame = 0 
Query:   35 FIVTKRQRDKLYSS-------SPFTLSALLTKE---DTVETQEKP-----AFNFKSYMVQKADAVNQALD-DAVPLREPLRIHEAMRYSLLAGGKRVRPVLCVAACELVGGAAATAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAGATVG-ASPPRIVRALGELARAIGAEGLVAGQVVDIKSEGLD--DVGLERLEFIHLHKTAALLEGAVVLGAILGGGTDEEIEKLRKFARYIGLLFQVVDDILDITKSSQELGKTAGKDLAADKVTYPKLLGIEKSKEFAAKLNKDAQDQLSGFDPVKAAPLVALANYIAYRQN 364
            FI ++ +RD   SS       +  + S+ LT +   D +  Q K      AF+FK YM++KA++VN ALD   VPLREPL + EA+RYSLLAGGKRVRP+LC+A CELVGG  ATAM AACAVEMIHT SLIHDDLPCMDN DLRRGKPTNHKVFGED+AVLAGDALLA AFEH+   + G  +  R++RA+ ELARAIG +GLVAGQVVD+ SE L+  DVGLERLEFIHLHKTAALLE A V+GAI+GGGT+EEIEKLRK+AR IGLLFQVVDDILD+TKS++ELGKTAGKD+ A K+TYP+L+G+E+S+E A KL+++A++QL GF+  KAAPLVALA+YI+ R +
Sbjct:   13 FIQSRGRRDNSISSVKSLKKRTGLSPSSALTSQGGRDMIPPQGKSNDHNSAFDFKLYMIRKAESVNAALDVSIVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVFGEDMAVLAGDALLALAFEHMTVVSSGLVASERMIRAVVELARAIGTKGLVAGQVVDLSSERLNPHDVGLERLEFIHLHKTAALLEAAAVIGAIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYPRLIGLERSREVAEKLSREAEEQLLGFESDKAAPLVALASYISCRND 361
[Close]
BLAST of rna-XM_014655175.2 vs. UniProtKB/Swiss-Prot
Match: sp|O04046|GGPP2_ARATH (Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 2 OS=Arabidopsis thaliana OX=3702 GN=GGPPS2 PE=1 SV=2)

HSP 1 Score: 419.468 bits (1077), Expect = 1.633e-145
Identity = 205/296 (69.26%), Postives = 241/296 (81.42%), Query Frame = 0 
Query:   71 FNFKSYMVQKADAVNQALDDAVPLREPLRIHEAMRYSLLAGGKRVRPVLCVAACELVGGAAATAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAGATVGASPPRIVRALGELARAIGAEGLVAGQVVDIKSEGLD--DVGLERLEFIHLHKTAALLEGAVVLGAILGGGTDEEIEKLRKFARYIGLLFQVVDDILDITKSSQELGKTAGKDLAADKVTYPKLLGIEKSKEFAAKLNKDAQDQLSGFDPVKAAPLVALANYIAYRQN 364
            F F  YM+ KA++VN+AL++A+P+ EPL+IHEAMRY++LA GKRVRP+LC+A+CELVGG    AMPAACAVEMIHTMSLI DDLPCMDNDDLRRGKPT HKV+GE VA+L+G ALL+ AFEH+  A +  S  R+V A+ ELAR+IG  GLVAGQ +DI SEGLD  +VGLE LEFIH+HKTA LLE A VLGAI+GGG+DEEIE +RKFAR IGLLFQVVDDILD TKSS+ELGKTAGKD  A K+TYPKL+G+EKSKEF  +L KDA+  L GF   K APLVAL  +IA R  
Sbjct:   83 FEFDPYMMSKAESVNKALEEAIPVGEPLKIHEAMRYAILAAGKRVRPILCLASCELVGGQENAAMPAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGVAILSGGALLSLAFEHMTTAEI--SSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLEHLEFIHVHKTAVLLETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSEELGKTAGKDQLAGKLTYPKLIGLEKSKEFVKRLTKDARQHLQGFSSEKVAPLVALTTFIANRNK 376
[Close]
BLAST of rna-XM_014655175.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9SLG2|GGPP4_ARATH (Geranylgeranyl pyrophosphate synthase 4 OS=Arabidopsis thaliana OX=3702 GN=GGPP4 PE=2 SV=1)

HSP 1 Score: 418.698 bits (1075), Expect = 2.800e-145
Identity = 211/350 (60.29%), Postives = 265/350 (75.71%), Query Frame = 0 
Query:   17 SRSPTFLFHGLTNSPIPSFIVTKRQRDKLYSSSPFTLSALLTKEDTVETQEKPAFNFKSYMVQKADAVNQALDDAVPLREPLRIHEAMRYSLLAGGKRVRPVLCVAACELVGGAAATAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAGATVGASPPRIVRALGELARAIGAEGLVAGQVVDIKSEGL--DDVGLERLEFIHLHKTAALLEGAVVLGAILGGGTDEEIEKLRKFARYIGLLFQVVDDILDITKSSQELGKTAGKDLAADKVTYPKLLGIEKSKEFAAKLNKDAQDQLSGFDPVKAAPLVALANYIAYRQN 364
            +R    L H    SP+ + I  ++   +   SS      L+ +ED        +F+FK YM+ KA+ +N+ALD+A+PL EPL IH+AMRY++LAGGKRVRP+LC+AACELVGG    A+ AACAVEMIHTMSLI DDLPCMDNDDLRRGKPT HKVFGE VA+L+G ALLA AFEH+  A V  S  ++VRA+ ELA++IG +GLVAGQ  D+ SEGL  +DVGLE LE+IH+HKT +LLE + V+GA++GGGT++EIEK+R FAR IGLLFQVVDDILD TKSS+ELGKTAGKD  A K+TYPK++G+EKSKEF  KL +DA++ L GFD  K  PL+AL N+IA R +
Sbjct:   33 TRRLIRLLHIPIKSPVAAAIFARKDTREFLDSSI----KLVNEEDDFGF----SFDFKPYMISKAETINRALDEAIPLIEPLNIHKAMRYAILAGGKRVRPILCLAACELVGGEERLAIQAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALAFEHLTEADV--SSKKMVRAVKELAKSIGTKGLVAGQAKDLSSEGLEQNDVGLEDLEYIHVHKTGSLLEASAVIGAVIGGGTEKEIEKVRNFARCIGLLFQVVDDILDETKSSEELGKTAGKDKVAGKLTYPKVIGVEKSKEFVEKLKRDAREHLQGFDSDKVKPLIALTNFIANRNH 372
[Close]
BLAST of rna-XM_014655175.2 vs. UniProtKB/Swiss-Prot
Match: sp|A0A0U3BRC5|GFDPS_LEUCN (Geranylfarnesyl diphosphate synthase, chloroplastic OS=Leucosceptrum canum OX=694369 GN=GFDPS PE=1 SV=1)

HSP 1 Score: 416.387 bits (1069), Expect = 1.767e-144
Identity = 214/353 (60.62%), Postives = 269/353 (76.20%), Query Frame = 0 
Query:   12 PSFTRSRSPTFLFHGLTNSPIPSFIVTKRQRDKLYSSSPFTLSALLTKEDTVETQEKPAFNFKSYMVQKADAVNQALDDAVPLREPLRIHEAMRYSLLAGGKRVRPVLCVAACELVGGAAATAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAGATVGASPPRIVRALGELARAIGAEGLVAGQVVDIKS--EGLDDVGLERLEFIHLHKTAALLEGAVVLGAILGGGTDEEIEKLRKFARYIGLLFQVVDDILDITKSSQELGKTAGKDLAADKVTYPKLLGIEKSKEFAAKLNKDAQDQLSGFDPVKAAPLVALANYIAYR 362
            P   R +  +FL H L +     F+     R    S+S F++S                F+FK+YM++K  AVNQALD A+P+REP++IHEAMRYSLL GGKR+ P++C+AAC LVGG  +TAMP+A A+EMIH MSL+HDDLPCMDNDDLRRG+P+NH VFGE   VLAG AL+A AFEHIA AT G  P +I+R +GELA+ IGAEG+V GQVVD++   EG   +GLE+LE+IHLHKTAA +E + V GA+LGG ++EEIE+LRK++R  GLLFQVVDDILD+TKSS+ELGKTAGKDLAA K TYPKLLG+EKS+E A KL ++AQ+QL GFDP+KAAPL+AL ++IAYR
Sbjct:   13 PGKPRYQHCSFL-HPLNHKLKSLFLPITGSR--FLSNSTFSVSDSAHSHQAKPHVRNAQFDFKAYMLEKITAVNQALDAALPVREPVKIHEAMRYSLLLGGKRICPIVCLAACHLVGGDESTAMPSAAALEMIHAMSLMHDDLPCMDNDDLRRGRPSNHVVFGEGATVLAGYALIARAFEHIATATQGVGPGKILRVIGELAQLIGAEGVVGGQVVDLRCGGEGQMAIGLEQLEYIHLHKTAASVEASAVAGAVLGGASEEEIERLRKYSRSAGLLFQVVDDILDVTKSSEELGKTAGKDLAAGKTTYPKLLGMEKSREMAEKLKREAQEQLLGFDPIKAAPLIALVDFIAYR 362
[Close]
BLAST of rna-XM_014655175.2 vs. Araport11
Match: AT4G36810.1 (| geranylgeranyl pyrophosphate synthase 1 | Chr4:17343513-17344628 FORWARD LENGTH=371 | 201606)

HSP 1 Score: 510.375 bits (1313), Expect = 0.000e+0
Identity = 257/371 (69.27%), Postives = 303/371 (81.67%), Query Frame = 0 
Query:    1 MSAVNFNAWLHPSFTRSRSPTFLFHGLTNSPIPSFI---VTKRQRDKLYSSSPFTLSALLTKEDTVETQEKPAFNFKSYMVQKADAVNQALDDAVPLREPLRIHEAMRYSLLAGGKRVRPVLCVAACELVGGAAATAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAGATVG--ASPPRIVRALGELARAIGAEGLVAGQVVDIKSEGLD--DVGLERLEFIHLHKTAALLEGAVVLGAILGGGTDEEIEKLRKFARYIGLLFQVVDDILDITKSSQELGKTAGKDLAADKVTYPKLLGIEKSKEFAAKLNKDAQDQLSGFDPVKAAPLVALANYIAYRQN 364
            M++V   +W+         P+ +     +   P  +   ++ R +  + SSS    S+++TKED +   E  +F+F SY++ KA+ VN+ALD AVPLREPL+IHEAMRYSLLAGGKRVRPVLC+AACELVGG  +TAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALL+FAFEH+A AT     SP R+VRA+GELA+AIG EGLVAGQVVDI SEGLD  DVGLE LEFIHLHKTAALLE + VLGAI+GGG+D+EIE+LRKFAR IGLLFQVVDDILD+TKSS+ELGKTAGKDL ADK+TYPK++G+EKS+EFA KLN++A+DQL GFD  K APL+ALANYIAYRQN
Sbjct:    1 MASVTLGSWIVVHHHNHHHPSSILTKSRSRSCPITLTKPISFRSKRTVSSSSSIVSSSVVTKEDNLRQSEPSSFDFMSYIITKAELVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFAFEHLASATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFIHLHKTAALLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDVTKSSKELGKTAGKDLIADKLTYPKIMGLEKSREFAEKLNREARDQLLGFDSDKVAPLLALANYIAYRQN 371
[Close]
BLAST of rna-XM_014655175.2 vs. Araport11
Match: AT2G18620.1 (| Terpenoid synthases superfamily protein | Chr2:8078317-8079360 FORWARD LENGTH=347 | 201606)

HSP 1 Score: 473.011 bits (1216), Expect = 4.520e-168
Identity = 237/343 (69.10%), Postives = 281/343 (81.92%), Query Frame = 0 
Query:   28 TNSPIPSFIVTKRQRDKLYSSSPFTLSALLTKEDTVETQEKPA----FNFKSYMVQKADAVNQALDDAVPLREPLRIHEAMRYSLLAGGKRVRPVLCVAACELVGGAAATAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAGATVGASPPRIVRALGELARAIGAEGLVAGQVVDIKSEGLD--DVGLERLEFIHLHKTAALLEGAVVLGAILGGGTDEEIEKLRKFARYIGLLFQVVDDILDITKSSQELGKTAGKDLAADKVTYPKLLGIEKSKEFAAKLNKDAQDQLSGFDPVKAAPLVALANYIAYRQN 364
            +++ IP FI  +          PF L   L+   +V  +++      F+F SYM+ KA+AVN+ALD AV LREP++IHEA+RYSLLA GKRVRPVLC+AACELVGG  + A+PAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDAL++FAFEH+A +T   SP R+VRA+GELA+AIG++GLVAGQVVD+ S G+D  DVGLE LEFIH+HKTA LLE A VLGAI+GGG+DEE+EKLR+FAR IGLLFQVVDDILD+TKSS+ELGKTAGKDL ADK+TYPKL+G+EKSK+FA KL  DA +QL GFD  +  PL+ALANYIA RQN
Sbjct:   16 SSASIPGFIKIQ----------PFLLRRKLSTVLSVTARDEGIIHNHFDFTSYMIGKANAVNEALDSAVSLREPIKIHEAIRYSLLARGKRVRPVLCIAACELVGGEESVALPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALISFAFEHLATST-AVSPARVVRAIGELAKAIGSKGLVAGQVVDLTSGGMDQNDVGLEVLEFIHVHKTAVLLEAATVLGAIVGGGSDEEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLIADKLTYPKLMGLEKSKDFADKLLSDAHEQLHGFDSSRVKPLLALANYIAKRQN 347
[Close]
BLAST of rna-XM_014655175.2 vs. Araport11
Match: AT2G23800.1 (| geranylgeranyl pyrophosphate synthase 2 | Chr2:10131619-10132749 REVERSE LENGTH=376 | 201606)

HSP 1 Score: 419.468 bits (1077), Expect = 1.671e-146
Identity = 205/296 (69.26%), Postives = 241/296 (81.42%), Query Frame = 0 
Query:   71 FNFKSYMVQKADAVNQALDDAVPLREPLRIHEAMRYSLLAGGKRVRPVLCVAACELVGGAAATAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAGATVGASPPRIVRALGELARAIGAEGLVAGQVVDIKSEGLD--DVGLERLEFIHLHKTAALLEGAVVLGAILGGGTDEEIEKLRKFARYIGLLFQVVDDILDITKSSQELGKTAGKDLAADKVTYPKLLGIEKSKEFAAKLNKDAQDQLSGFDPVKAAPLVALANYIAYRQN 364
            F F  YM+ KA++VN+AL++A+P+ EPL+IHEAMRY++LA GKRVRP+LC+A+CELVGG    AMPAACAVEMIHTMSLI DDLPCMDNDDLRRGKPT HKV+GE VA+L+G ALL+ AFEH+  A +  S  R+V A+ ELAR+IG  GLVAGQ +DI SEGLD  +VGLE LEFIH+HKTA LLE A VLGAI+GGG+DEEIE +RKFAR IGLLFQVVDDILD TKSS+ELGKTAGKD  A K+TYPKL+G+EKSKEF  +L KDA+  L GF   K APLVAL  +IA R  
Sbjct:   83 FEFDPYMMSKAESVNKALEEAIPVGEPLKIHEAMRYAILAAGKRVRPILCLASCELVGGQENAAMPAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGVAILSGGALLSLAFEHMTTAEI--SSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLEHLEFIHVHKTAVLLETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSEELGKTAGKDQLAGKLTYPKLIGLEKSKEFVKRLTKDARQHLQGFSSEKVAPLVALTTFIANRNK 376
[Close]
BLAST of rna-XM_014655175.2 vs. Araport11
Match: AT2G18640.1 (| geranylgeranyl pyrophosphate synthase 4 | Chr2:8083754-8084872 REVERSE LENGTH=372 | 201606)

HSP 1 Score: 418.698 bits (1075), Expect = 2.865e-146
Identity = 211/350 (60.29%), Postives = 265/350 (75.71%), Query Frame = 0 
Query:   17 SRSPTFLFHGLTNSPIPSFIVTKRQRDKLYSSSPFTLSALLTKEDTVETQEKPAFNFKSYMVQKADAVNQALDDAVPLREPLRIHEAMRYSLLAGGKRVRPVLCVAACELVGGAAATAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAGATVGASPPRIVRALGELARAIGAEGLVAGQVVDIKSEGL--DDVGLERLEFIHLHKTAALLEGAVVLGAILGGGTDEEIEKLRKFARYIGLLFQVVDDILDITKSSQELGKTAGKDLAADKVTYPKLLGIEKSKEFAAKLNKDAQDQLSGFDPVKAAPLVALANYIAYRQN 364
            +R    L H    SP+ + I  ++   +   SS      L+ +ED        +F+FK YM+ KA+ +N+ALD+A+PL EPL IH+AMRY++LAGGKRVRP+LC+AACELVGG    A+ AACAVEMIHTMSLI DDLPCMDNDDLRRGKPT HKVFGE VA+L+G ALLA AFEH+  A V  S  ++VRA+ ELA++IG +GLVAGQ  D+ SEGL  +DVGLE LE+IH+HKT +LLE + V+GA++GGGT++EIEK+R FAR IGLLFQVVDDILD TKSS+ELGKTAGKD  A K+TYPK++G+EKSKEF  KL +DA++ L GFD  K  PL+AL N+IA R +
Sbjct:   33 TRRLIRLLHIPIKSPVAAAIFARKDTREFLDSSI----KLVNEEDDFGF----SFDFKPYMISKAETINRALDEAIPLIEPLNIHKAMRYAILAGGKRVRPILCLAACELVGGEERLAIQAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALAFEHLTEADV--SSKKMVRAVKELAKSIGTKGLVAGQAKDLSSEGLEQNDVGLEDLEYIHVHKTGSLLEASAVIGAVIGGGTEKEIEKVRNFARCIGLLFQVVDDILDETKSSEELGKTAGKDKVAGKLTYPKVIGVEKSKEFVEKLKRDAREHLQGFDSDKVKPLIALTNFIANRNH 372
[Close]
BLAST of rna-XM_014655175.2 vs. Araport11
Match: AT3G14550.3 (| geranylgeranyl pyrophosphate synthase 3 | Chr3:4884754-4885945 REVERSE LENGTH=360 | 201606)

HSP 1 Score: 408.683 bits (1049), Expect = 2.102e-142
Identity = 230/348 (66.09%), Postives = 277/348 (79.60%), Query Frame = 0 
Query:   35 FIVTKRQRDKLYSS-------SPFTLSALLTKE---DTVETQEK-----PAFNFKSYMVQKADAVNQALDDAVPLREPLRIHEAMRYSLLAGGKRVRPVLCVAACELVGGAAATAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAGATVG-ASPPRIVRALGELARAIGAEGLVAGQVVDIKSEGL--DDVGLERLEFIHLHKTAALLEGAVVLGAILGGGTDEEIEKLRKFARYIGLLFQVVDDILDITKSSQELGKTAGKDLAADKVTYPKLLGIEKSKEFAAKLNKDAQDQLSGFDPVKAAPLVALANYIAYRQN 364
            FI ++ +RD   SS       +  + S+ LT +   D +  + K      AF+FK YM++KA++VN ALD +VPLREPL + EA+RYSLLAGGKRVRP+LC+A CELVGG  ATAM AACAVEMIHT SLIHDDLPCMDN DLRRGKPTNHKV+GED+AVLAGDALLA AFEH+   + G  +P R++RA+ ELARAIG  GLVAGQ++D+ SE L  D VGLE LEFIHLHKTAALLE A VLG I+GGGT+EEIEKLRK+AR IGLLFQVVDDILD+TKS++ELGKTAGKD+ A K+TYP+L+G+E+SKE A KL ++A++QL GFDP KAAPLVALA+YIA R N
Sbjct:   13 FIQSRGRRDNSISSVKSLKKRTGLSPSSALTSQGGRDMIPPEGKCNDHNSAFDFKLYMIRKAESVNAALDVSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAFEHMTFVSSGLVAPERMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAALLEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYPRLIGLERSKEVAEKLRREAEEQLLGFDPSKAAPLVALASYIACRHN 360
[Close]
BLAST of rna-XM_014655175.2 vs. Araport11
Match: AT3G14550.2 (| geranylgeranyl pyrophosphate synthase 3 | Chr3:4884754-4885945 REVERSE LENGTH=360 | 201606)

HSP 1 Score: 408.683 bits (1049), Expect = 2.102e-142
Identity = 230/348 (66.09%), Postives = 277/348 (79.60%), Query Frame = 0 
Query:   35 FIVTKRQRDKLYSS-------SPFTLSALLTKE---DTVETQEK-----PAFNFKSYMVQKADAVNQALDDAVPLREPLRIHEAMRYSLLAGGKRVRPVLCVAACELVGGAAATAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAGATVG-ASPPRIVRALGELARAIGAEGLVAGQVVDIKSEGL--DDVGLERLEFIHLHKTAALLEGAVVLGAILGGGTDEEIEKLRKFARYIGLLFQVVDDILDITKSSQELGKTAGKDLAADKVTYPKLLGIEKSKEFAAKLNKDAQDQLSGFDPVKAAPLVALANYIAYRQN 364
            FI ++ +RD   SS       +  + S+ LT +   D +  + K      AF+FK YM++KA++VN ALD +VPLREPL + EA+RYSLLAGGKRVRP+LC+A CELVGG  ATAM AACAVEMIHT SLIHDDLPCMDN DLRRGKPTNHKV+GED+AVLAGDALLA AFEH+   + G  +P R++RA+ ELARAIG  GLVAGQ++D+ SE L  D VGLE LEFIHLHKTAALLE A VLG I+GGGT+EEIEKLRK+AR IGLLFQVVDDILD+TKS++ELGKTAGKD+ A K+TYP+L+G+E+SKE A KL ++A++QL GFDP KAAPLVALA+YIA R N
Sbjct:   13 FIQSRGRRDNSISSVKSLKKRTGLSPSSALTSQGGRDMIPPEGKCNDHNSAFDFKLYMIRKAESVNAALDVSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAFEHMTFVSSGLVAPERMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAALLEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYPRLIGLERSKEVAEKLRREAEEQLLGFDPSKAAPLVALASYIACRHN 360
[Close]
BLAST of rna-XM_014655175.2 vs. Araport11
Match: AT3G14550.1 (| geranylgeranyl pyrophosphate synthase 3 | Chr3:4884754-4885945 REVERSE LENGTH=360 | 201606)

HSP 1 Score: 408.683 bits (1049), Expect = 2.102e-142
Identity = 230/348 (66.09%), Postives = 277/348 (79.60%), Query Frame = 0 
Query:   35 FIVTKRQRDKLYSS-------SPFTLSALLTKE---DTVETQEK-----PAFNFKSYMVQKADAVNQALDDAVPLREPLRIHEAMRYSLLAGGKRVRPVLCVAACELVGGAAATAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAGATVG-ASPPRIVRALGELARAIGAEGLVAGQVVDIKSEGL--DDVGLERLEFIHLHKTAALLEGAVVLGAILGGGTDEEIEKLRKFARYIGLLFQVVDDILDITKSSQELGKTAGKDLAADKVTYPKLLGIEKSKEFAAKLNKDAQDQLSGFDPVKAAPLVALANYIAYRQN 364
            FI ++ +RD   SS       +  + S+ LT +   D +  + K      AF+FK YM++KA++VN ALD +VPLREPL + EA+RYSLLAGGKRVRP+LC+A CELVGG  ATAM AACAVEMIHT SLIHDDLPCMDN DLRRGKPTNHKV+GED+AVLAGDALLA AFEH+   + G  +P R++RA+ ELARAIG  GLVAGQ++D+ SE L  D VGLE LEFIHLHKTAALLE A VLG I+GGGT+EEIEKLRK+AR IGLLFQVVDDILD+TKS++ELGKTAGKD+ A K+TYP+L+G+E+SKE A KL ++A++QL GFDP KAAPLVALA+YIA R N
Sbjct:   13 FIQSRGRRDNSISSVKSLKKRTGLSPSSALTSQGGRDMIPPEGKCNDHNSAFDFKLYMIRKAESVNAALDVSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAFEHMTFVSSGLVAPERMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAALLEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYPRLIGLERSKEVAEKLRREAEEQLLGFDPSKAAPLVALASYIACRHN 360
[Close]
BLAST of rna-XM_014655175.2 vs. Araport11
Match: AT3G14530.1 (| Terpenoid synthases superfamily protein | Chr3:4879293-4880448 REVERSE LENGTH=360 | 201606)

HSP 1 Score: 403.29 bits (1035), Expect = 2.538e-140
Identity = 222/331 (67.07%), Postives = 266/331 (80.36%), Query Frame = 0 
Query:   45 LYSSSPFTLSALLTKEDT--------VETQEKPAFNFKSYMVQKADAVNQALDDAVPLREPLRIHEAMRYSLLAGGKRVRPVLCVAACELVGGAAATAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAGATVG-ASPPRIVRALGELARAIGAEGLVAGQVVDIKSEGL--DDVGLERLEFIHLHKTAALLEGAVVLGAILGGGTDEEIEKLRKFARYIGLLFQVVDDILDITKSSQELGKTAGKDLAADKVTYPKLLGIEKSKEFAAKLNKDAQDQLSGFDPVKAAPLVALANYIAYRQN 364
            L   +  +LS+ LT +D                AF+FK YM++KA++VN ALD +VPL +PL I EA+RYSLLAGGKRVRP+LC+AACELVGG  ATAM AACAVEMIHT SLIHDDLPCMDN DLRRGKPTNHKV+GED+AVLAGDALLA AFEH+   + G  +P +++RA+ ELARAIG  GLVAGQ++D+ SE L  D VGLE LEFIHLHKTAALLE A VLG I+GGGT++EIEKLRK+AR IGLLFQVVDDILD+TKS++ELGKTAGKD+ A K+TYP+L+G+E S+E A KL ++A++QL GFDP KAAPLVALA+YIA R N
Sbjct:   30 LRKRTVLSLSSALTSQDAGHMIQPEGKSNDNNSAFDFKLYMIRKAESVNAALDVSVPLLKPLTIQEAVRYSLLAGGKRVRPLLCIAACELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAFEHMTVVSSGLVAPEKMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAALLEAAAVLGVIMGGGTEQEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYPRLIGLEGSREVAEKLRREAEEQLLGFDPSKAAPLVALASYIACRHN 360
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BLAST of rna-XM_014655175.2 vs. Araport11
Match: AT3G29430.1 (| Terpenoid synthases superfamily protein | Chr3:11311427-11312604 FORWARD LENGTH=357 | 201606)

HSP 1 Score: 401.364 bits (1030), Expect = 1.464e-139
Identity = 232/361 (64.27%), Postives = 284/361 (78.67%), Query Frame = 0 
Query:   15 TRSRSPTFL-FHGLTNSPIPSFIVTKRQRDKLYSSSPFTLSALLTKE--DTVETQEKP-----AFNFKSYMVQKADAVNQALDDAVPLREPLRIHEAMRYSLLAGGKRVRPVLCVAACELVGGAAATAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAGATVG-ASPPRIVRALGELARAIGAEGLVAGQVVDIKSEGL--DDVGLERLEFIHLHKTAALLEGAVVLGAILGGGTDEEIEKLRKFARYIGLLFQVVDDILDITKSSQELGKTAGKDLAADKVTYPKLLGIEKSKEFAAKLNKDAQDQLSGFDPVKAAPLVALANYIAYRQN 364
            T S S  F+ F G   + + SF       + L   +  +LS  L+ +  D +  + K      AF+FKSYM++KA++V+ AL+ +VPL+EPL I EA+RYSLLAGGKRVRP+LC+AACELVGG  ATAM AACAVEMIHT SLIHDDLPCMD+ DLRRGKPTNHK FGED+AVLAGDALLA AFEH+   + G  +P R++RA+ ELA+AIG +GLVAGQV D+ S+GL  DDVGLERLEFIHLHKTAALLE A VLGAI+GGGT+EEIEKLRK+AR IGLLFQVVDDILD+T+S++ELGKTAGKD+ A K+TYP+L+G+E+S+E A KL ++A +QL GFD  KAAPLVALA+YIA R N
Sbjct:    4 TLSSSSLFIQFRGRRYNSLSSF-------NNLQKRTVLSLSCALSSQGGDMIPPEGKSNDRNSAFDFKSYMIRKAESVSAALNVSVPLQEPLTIQEAVRYSLLAGGKRVRPLLCIAACELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHKEFGEDMAVLAGDALLALAFEHMTFVSNGLVAPERMIRAVMELAKAIGTKGLVAGQVTDLCSQGLNPDDVGLERLEFIHLHKTAALLEAAAVLGAIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTESTKELGKTAGKDVMAGKLTYPRLIGLERSREVAEKLRREAAEQLLGFDSDKAAPLVALASYIACRHN 357
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BLAST of rna-XM_014655175.2 vs. Araport11
Match: AT3G20160.1 (| Terpenoid synthases superfamily protein | Chr3:7038995-7040029 FORWARD LENGTH=344 | 201606)

HSP 1 Score: 397.897 bits (1021), Expect = 1.652e-138
Identity = 194/299 (64.88%), Postives = 240/299 (80.27%), Query Frame = 0 
Query:   71 FNFKSYMVQKADAVNQALDDAVPLREP-LRIHEAMRYSLLAGGKRVRPVLCVAACELVGGAAATAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAGATVGASPP-RIVRALGELARAIGAEGLVAGQVVDIKSEGL---DDVGLERLEFIHLHKTAALLEGAVVLGAILGGGTDEEIEKLRKFARYIGLLFQVVDDILDITKSSQELGKTAGKDLAADKVTYPKLLGIEKSKEFAAKLNKDAQDQLSGFDPVKAAPLVALANYIAYRQN 364
            F F SYMV KA +VN+AL++AVPLREP L+I EAMRY+LL+ GKRVRP+LC+AACELVGG  +TAM AACA+EM+H  SLI DDLPCMDND LRRGKPTNH VFGE +A+LA  AL+A A +    +T    PP RI++ + E+ +A+  EGLVAGQ  D+  EG+    D GLE LEFIH+HKTAALLE A V+GAI+GGG+DEEIE+LR +AR IGL+FQVVDD+LD+TKSS+ELGKTAGKDL A K+TYP+L+G+EKSKE+A +LN +A++ L GFD  K APLV+LA+YI  RQN
Sbjct:   48 FKFMSYMVNKAKSVNKALEEAVPLREPELKIREAMRYTLLSDGKRVRPMLCLAACELVGGQESTAMSAACAIEMLHASSLILDDLPCMDNDSLRRGKPTNHIVFGESIAILASQALIALAVQKTTSSTFADVPPERILKTVQEMVKAV--EGLVAGQQADLAGEGMRFDSDTGLEHLEFIHIHKTAALLEAAAVMGAIMGGGSDEEIERLRSYARCIGLMFQVVDDVLDVTKSSEELGKTAGKDLIAGKLTYPRLMGVEKSKEYAERLNIEAREHLLGFDIDKVAPLVSLADYIVNRQN 344
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BLAST of rna-XM_014655175.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3UX51|A0A1S3UX51_VIGRR (geranylgeranyl pyrophosphate synthase, chloroplastic OS=Vigna radiata var. radiata OX=3916 GN=LOC106769524 PE=3 SV=1)

HSP 1 Score: 742.651 bits (1916), Expect = 0.000e+0
Identity = 364/364 (100.00%), Postives = 364/364 (100.00%), Query Frame = 0 
Query:    1 MSAVNFNAWLHPSFTRSRSPTFLFHGLTNSPIPSFIVTKRQRDKLYSSSPFTLSALLTKEDTVETQEKPAFNFKSYMVQKADAVNQALDDAVPLREPLRIHEAMRYSLLAGGKRVRPVLCVAACELVGGAAATAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAGATVGASPPRIVRALGELARAIGAEGLVAGQVVDIKSEGLDDVGLERLEFIHLHKTAALLEGAVVLGAILGGGTDEEIEKLRKFARYIGLLFQVVDDILDITKSSQELGKTAGKDLAADKVTYPKLLGIEKSKEFAAKLNKDAQDQLSGFDPVKAAPLVALANYIAYRQN 364
            MSAVNFNAWLHPSFTRSRSPTFLFHGLTNSPIPSFIVTKRQRDKLYSSSPFTLSALLTKEDTVETQEKPAFNFKSYMVQKADAVNQALDDAVPLREPLRIHEAMRYSLLAGGKRVRPVLCVAACELVGGAAATAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAGATVGASPPRIVRALGELARAIGAEGLVAGQVVDIKSEGLDDVGLERLEFIHLHKTAALLEGAVVLGAILGGGTDEEIEKLRKFARYIGLLFQVVDDILDITKSSQELGKTAGKDLAADKVTYPKLLGIEKSKEFAAKLNKDAQDQLSGFDPVKAAPLVALANYIAYRQN
Sbjct:    1 MSAVNFNAWLHPSFTRSRSPTFLFHGLTNSPIPSFIVTKRQRDKLYSSSPFTLSALLTKEDTVETQEKPAFNFKSYMVQKADAVNQALDDAVPLREPLRIHEAMRYSLLAGGKRVRPVLCVAACELVGGAAATAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAGATVGASPPRIVRALGELARAIGAEGLVAGQVVDIKSEGLDDVGLERLEFIHLHKTAALLEGAVVLGAILGGGTDEEIEKLRKFARYIGLLFQVVDDILDITKSSQELGKTAGKDLAADKVTYPKLLGIEKSKEFAAKLNKDAQDQLSGFDPVKAAPLVALANYIAYRQN 364
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BLAST of rna-XM_014655175.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9TPC5|A0A0L9TPC5_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan01g187700 PE=3 SV=1)

HSP 1 Score: 732.25 bits (1889), Expect = 0.000e+0
Identity = 357/364 (98.08%), Postives = 363/364 (99.73%), Query Frame = 0 
Query:    1 MSAVNFNAWLHPSFTRSRSPTFLFHGLTNSPIPSFIVTKRQRDKLYSSSPFTLSALLTKEDTVETQEKPAFNFKSYMVQKADAVNQALDDAVPLREPLRIHEAMRYSLLAGGKRVRPVLCVAACELVGGAAATAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAGATVGASPPRIVRALGELARAIGAEGLVAGQVVDIKSEGLDDVGLERLEFIHLHKTAALLEGAVVLGAILGGGTDEEIEKLRKFARYIGLLFQVVDDILDITKSSQELGKTAGKDLAADKVTYPKLLGIEKSKEFAAKLNKDAQDQLSGFDPVKAAPLVALANYIAYRQN 364
            MSAVNFNAWLHPSFTRSRSPTFLFHGLTNSPIPSFIVTKR RDKLYSSSPFT+SA+LTKE+TVET+EKPAFNFKSYMVQKADAVNQALDDAVPLREPLRIHEAMRYSLLAGGKRVRPVLCVAACELVGGAA+TAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAGATVGASPPRIVRALGELARAIGAEGLVAGQVVDIKSEGLDDVGLERLEFIHLHKTAALLEGAVVLGAILGGGTDEEIEKLRKFARYIGLLFQVVDDILD+TKSSQELGKTAGKDLAADKVTYPKLLGIEKSKEFAAKLNKDAQDQLSGFDPVKAAPLVALANYIAYRQN
Sbjct:    1 MSAVNFNAWLHPSFTRSRSPTFLFHGLTNSPIPSFIVTKRPRDKLYSSSPFTVSAVLTKEETVETEEKPAFNFKSYMVQKADAVNQALDDAVPLREPLRIHEAMRYSLLAGGKRVRPVLCVAACELVGGAASTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAGATVGASPPRIVRALGELARAIGAEGLVAGQVVDIKSEGLDDVGLERLEFIHLHKTAALLEGAVVLGAILGGGTDEEIEKLRKFARYIGLLFQVVDDILDVTKSSQELGKTAGKDLAADKVTYPKLLGIEKSKEFAAKLNKDAQDQLSGFDPVKAAPLVALANYIAYRQN 364
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BLAST of rna-XM_014655175.2 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6KY95|A0A4D6KY95_VIGUN (Geranylgeranyl diphosphate synthase OS=Vigna unguiculata OX=3917 GN=DEO72_LG2g2053 PE=3 SV=1)

HSP 1 Score: 722.62 bits (1864), Expect = 0.000e+0
Identity = 352/364 (96.70%), Postives = 360/364 (98.90%), Query Frame = 0 
Query:    1 MSAVNFNAWLHPSFTRSRSPTFLFHGLTNSPIPSFIVTKRQRDKLYSSSPFTLSALLTKEDTVETQEKPAFNFKSYMVQKADAVNQALDDAVPLREPLRIHEAMRYSLLAGGKRVRPVLCVAACELVGGAAATAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAGATVGASPPRIVRALGELARAIGAEGLVAGQVVDIKSEGLDDVGLERLEFIHLHKTAALLEGAVVLGAILGGGTDEEIEKLRKFARYIGLLFQVVDDILDITKSSQELGKTAGKDLAADKVTYPKLLGIEKSKEFAAKLNKDAQDQLSGFDPVKAAPLVALANYIAYRQN 364
            MSAVNFNAWLHPSFTRSRSPTFLFHGLTNSPIPS IVTKR RDKLYSS  FT+SA+LTKE+TVET+EKPAFNFKSYM+QKADAVNQALDDAVPLREPLRIHEAMRYSLLAGGKRVRPVLCVAACELVGGAAATAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAGATVGASPPRIVRALGELARAIGAEGLVAGQVVDIKSEGLDDVGLERLEFIHLHKTAALLEGAVVLGAILGGG+DEEIE+LRKFARYIGLLFQVVDDILD+TKSSQELGKTAGKDLAADKVTYPKLLGIEKSKEFAAKLNKDAQDQLSGFDPVKAAPLVALANYIAYRQN
Sbjct:    1 MSAVNFNAWLHPSFTRSRSPTFLFHGLTNSPIPSLIVTKRPRDKLYSSPSFTVSAVLTKEETVETEEKPAFNFKSYMLQKADAVNQALDDAVPLREPLRIHEAMRYSLLAGGKRVRPVLCVAACELVGGAAATAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAGATVGASPPRIVRALGELARAIGAEGLVAGQVVDIKSEGLDDVGLERLEFIHLHKTAALLEGAVVLGAILGGGSDEEIERLRKFARYIGLLFQVVDDILDVTKSSQELGKTAGKDLAADKVTYPKLLGIEKSKEFAAKLNKDAQDQLSGFDPVKAAPLVALANYIAYRQN 364
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BLAST of rna-XM_014655175.2 vs. UniProtKB/TrEMBL
Match: tr|V7CCX8|V7CCX8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_003G251500g PE=3 SV=1)

HSP 1 Score: 644.04 bits (1660), Expect = 0.000e+0
Identity = 330/365 (90.41%), Postives = 347/365 (95.07%), Query Frame = 0 
Query:    1 MSAVNFNAWLHPSFTRSRSPTFLFHGLTNSPIPSFIVTKRQRDKLYSS-SPFTLSALLTKEDTVETQEKPAFNFKSYMVQKADAVNQALDDAVPLREPLRIHEAMRYSLLAGGKRVRPVLCVAACELVGGAAATAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAGATVGASPPRIVRALGELARAIGAEGLVAGQVVDIKSEGLDDVGLERLEFIHLHKTAALLEGAVVLGAILGGGTDEEIEKLRKFARYIGLLFQVVDDILDITKSSQELGKTAGKDLAADKVTYPKLLGIEKSKEFAAKLNKDAQDQLSGFDPVKAAPLVALANYIAYRQN 364
            MSA+NFN WL PSFTRSRS TFLFHGLTN PIP  ++ KR RDK YSS + FTLSALLTK++TV+T+EKPAF+F SYM+ +A AVNQAL DAVPLREPLRIHEAMRYSLLAGGKRVRPVLCVAACELVGG+AATAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIA ATVGASPPRIVRALGELARAIGAEGLVAGQVVDIKSEGLD+VGLERLEFIH+HKTAALLEGAVVLGAILGGGTDEEIEKLRKFARYIGLLFQVVDDILD+TKSSQELGKTAGKDL ADKVTYPKLLGIEKS EFAAKLNKDAQDQLSGFDPVKAAPLVAL+NYIA+RQN
Sbjct:    1 MSALNFNPWLQPSFTRSRSLTFLFHGLTNFPIP-ILIPKRPRDKPYSSATSFTLSALLTKQETVQTEEKPAFDFNSYMLHQAHAVNQALHDAVPLREPLRIHEAMRYSLLAGGKRVRPVLCVAACELVGGSAATAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIACATVGASPPRIVRALGELARAIGAEGLVAGQVVDIKSEGLDNVGLERLEFIHIHKTAALLEGAVVLGAILGGGTDEEIEKLRKFARYIGLLFQVVDDILDVTKSSQELGKTAGKDLTADKVTYPKLLGIEKSMEFAAKLNKDAQDQLSGFDPVKAAPLVALSNYIAHRQN 364
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BLAST of rna-XM_014655175.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445GIH7|A0A445GIH7_GLYSO (Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Glycine soja OX=3848 GN=D0Y65_043684 PE=3 SV=1)

HSP 1 Score: 601.282 bits (1549), Expect = 0.000e+0
Identity = 308/376 (81.91%), Postives = 325/376 (86.44%), Query Frame = 0 
Query:    1 MSAVNFNAWLHPSFT-------RSRS-PT-FLFHGLTN--SPIPSFIVTKRQRDKLYSSSPFTLSALLTKEDTVETQEKPA-FNFKSYMVQKADAVNQALDDAVPLREPLRIHEAMRYSLLAGGKRVRPVLCVAACELVGGAAATAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAGATVGASPPRIVRALGELARAIGAEGLVAGQVVDIKSEGLDDVGLERLEFIHLHKTAALLEGAVVLGAILGGGTDEEIEKLRKFARYIGLLFQVVDDILDITKSSQELGKTAGKDLAADKVTYPKLLGIEKSKEFAAKLNKDAQDQLSGFDPVKAAPLVALANYIAYRQN 364
            MSAVN N W  PSF        RSRS PT   FHG+    SPI S  V KR          FTLSA+LTKEDTVET+EKP  F+FK+YMV KA AVN+ALDDAV LREP +IHEAMRYSLLAGGKRVRPVLCVAACELVGG  ATAMPAACA+EMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIA +T GASP RIVRA+GELAR+IG+EGLVAGQVVDI SEGL DV LERLEFIH+HKTAALLEGAVVLGAILGGGTD+E+EKLRKFARYIGLLFQVVDDILD+TKSSQELGKTAGKDL ADKVTYPKLLGIEKSK FAAKLNKDAQDQL GFDPVKAAPL+ALANYIAYRQN
Sbjct:    1 MSAVNLNTWPRPSFILNQTATRRSRSSPTSHFFHGVNKLPSPISSLTVAKRS---------FTLSAVLTKEDTVETEEKPPIFDFKNYMVSKASAVNKALDDAVSLREPQKIHEAMRYSLLAGGKRVRPVLCVAACELVGGEEATAMPAACAIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAASTRGASPGRIVRAIGELARSIGSEGLVAGQVVDINSEGLADVDLERLEFIHVHKTAALLEGAVVLGAILGGGTDDEVEKLRKFARYIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEKSKVFAAKLNKDAQDQLVGFDPVKAAPLIALANYIAYRQN 367
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BLAST of rna-XM_014655175.2 vs. UniProtKB/TrEMBL
Match: tr|I1MNI2|I1MNI2_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100785539 PE=3 SV=1)

HSP 1 Score: 601.282 bits (1549), Expect = 0.000e+0
Identity = 308/376 (81.91%), Postives = 325/376 (86.44%), Query Frame = 0 
Query:    1 MSAVNFNAWLHPSFT-------RSRS-PT-FLFHGLTN--SPIPSFIVTKRQRDKLYSSSPFTLSALLTKEDTVETQEKPA-FNFKSYMVQKADAVNQALDDAVPLREPLRIHEAMRYSLLAGGKRVRPVLCVAACELVGGAAATAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAGATVGASPPRIVRALGELARAIGAEGLVAGQVVDIKSEGLDDVGLERLEFIHLHKTAALLEGAVVLGAILGGGTDEEIEKLRKFARYIGLLFQVVDDILDITKSSQELGKTAGKDLAADKVTYPKLLGIEKSKEFAAKLNKDAQDQLSGFDPVKAAPLVALANYIAYRQN 364
            MSAVN N W  PSF        RSRS PT   FHG+    SPI S  V KR          FTLSA+LTKEDTVET+EKP  F+FK+YMV KA AVN+ALDDAV LREP +IHEAMRYSLLAGGKRVRPVLCVAACELVGG  ATAMPAACA+EMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIA +T GASP RIVRA+GELAR+IG+EGLVAGQVVDI SEGL DV LERLEFIH+HKTAALLEGAVVLGAILGGGTD+E+EKLRKFARYIGLLFQVVDDILD+TKSSQELGKTAGKDL ADKVTYPKLLGIEKSK FAAKLNKDAQDQL GFDPVKAAPL+ALANYIAYRQN
Sbjct:    1 MSAVNLNTWPRPSFILNQTATRRSRSSPTSHFFHGVNKLPSPISSLTVAKRS---------FTLSAVLTKEDTVETEEKPPIFDFKNYMVSKASAVNKALDDAVSLREPQKIHEAMRYSLLAGGKRVRPVLCVAACELVGGEEATAMPAACAIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAASTRGASPGRIVRAIGELARSIGSEGLVAGQVVDINSEGLADVDLERLEFIHVHKTAALLEGAVVLGAILGGGTDDEVEKLRKFARYIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEKSKVFAAKLNKDAQDQLVGFDPVKAAPLIALANYIAYRQN 367
[Close]
BLAST of rna-XM_014655175.2 vs. UniProtKB/TrEMBL
Match: tr|A0A6A5MJW2|A0A6A5MJW2_LUPAL (Putative geranylgeranyl diphosphate synthase OS=Lupinus albus OX=3870 GN=Lal_00038008 PE=3 SV=1)

HSP 1 Score: 578.556 bits (1490), Expect = 0.000e+0
Identity = 292/373 (78.28%), Postives = 322/373 (86.33%), Query Frame = 0 
Query:    1 MSAVNFNAWLHPSF-----TRSRSPTF-LFHGLTNSPIPSFIVTKRQRDKLYSSSPFTLSALLTKEDTV---ETQEKPAFNFKSYMVQKADAVNQALDDAVPLREPLRIHEAMRYSLLAGGKRVRPVLCVAACELVGGAAATAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAGATVGASPPRIVRALGELARAIGAEGLVAGQVVDIKSEGLDDVGLERLEFIHLHKTAALLEGAVVLGAILGGGTDEEIEKLRKFARYIGLLFQVVDDILDITKSSQELGKTAGKDLAADKVTYPKLLGIEKSKEFAAKLNKDAQDQLSGFDPVKAAPLVALANYIAYRQN 364
            MS++N N W  P F     TRSRS  F LFH L   PI S   TK +R +L S S F++SA+LTK+DT+   E +EK AFNF+SYMV+KA +VN+ALDDAV L+EP +IHEAMRYSLLAGGKRVRPVLCVAACELVGG  + AMPAAC++EMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIA +T   SP RIVRA+GELA++IG EGLVAGQVVDI SEGL DVGLERLEFIHLHKTAALLEGAVVLGAILGGG DEE+EKLR FARYIGL+FQVVDDILD+TKSS+ELGKTAGKDL ADKVTYPKLLGIEKSKEFA KLN+DAQ+QLSGFD  KAAPLVALANYIA+RQN
Sbjct:    1 MSSLNLNTWARPRFMLKQATRSRSTNFHLFHSLRKLPISSISTTKPKRPQLSSFSSFSVSAVLTKDDTLKSEEEKEKSAFNFQSYMVEKARSVNKALDDAVLLKEPQKIHEAMRYSLLAGGKRVRPVLCVAACELVGGKESMAMPAACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAVSTADVSPARIVRAIGELAKSIGTEGLVAGQVVDINSEGLSDVGLERLEFIHLHKTAALLEGAVVLGAILGGGNDEEVEKLRMFARYIGLMFQVVDDILDVTKSSEELGKTAGKDLVADKVTYPKLLGIEKSKEFAQKLNRDAQEQLSGFDLDKAAPLVALANYIAFRQN 373
[Close]
BLAST of rna-XM_014655175.2 vs. UniProtKB/TrEMBL
Match: tr|A0A371ERR2|A0A371ERR2_MUCPR (Geranylgeranyl pyrophosphate synthase, chloroplastic (Fragment) OS=Mucuna pruriens OX=157652 GN=GGPS PE=3 SV=1)

HSP 1 Score: 573.548 bits (1477), Expect = 0.000e+0
Identity = 290/351 (82.62%), Postives = 310/351 (88.32%), Query Frame = 0 
Query:    1 MSAVNFNAWLHPSF-----TRSRSPTFLFHGLTNSPIPSFIVTKRQRDKLYSSSPFTLSALLTKEDTVETQEKPAFNFKSYMVQKADAVNQALDDAVPLREPLRIHEAMRYSLLAGGKRVRPVLCVAACELVGGAAATAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAGATVGASPPRIVRALGELARAIGAEGLVAGQVVDIKSEGLDDVGLERLEFIHLHKTAALLEGAVVLGAILGGGTDEEIEKLRKFARYIGLLFQVVDDILDITKSSQELGKTAGKDLAADKVTYPKLLGIEKSKEFAAKLNKDAQDQLSGFDP 346
            MSAVN NAW  PSF     TRSRS T LF+ +T        VT R+R   ++ S  ++SALLTKEDTVET+EKPAFNFKSYMV KA  VN+ALDDAV LR+P RIHEAMRYSLLAGGKRVRPVLCVAACELVGG  ATAMPAACA+EMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIA AT GASP +IVRA+GELAR+IGAEGLVAGQVVDI SEGL DVGL+RLEFIH+HKTAALLEGAVVLGAILGG +D+E+EKLRKFARYIGLLFQVVDDILD+TKSSQELGKTAGKDL ADKVTYPKLLGIEKSKEFAAKLNKDAQDQL GFDP
Sbjct:    1 MSAVNLNAWARPSFVLNQGTRSRSQT-LFNAVT--------VTSRRR---HNKSSLSVSALLTKEDTVETEEKPAFNFKSYMVSKASTVNKALDDAVSLRDPRRIHEAMRYSLLAGGKRVRPVLCVAACELVGGHEATAMPAACAIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAVATSGASPAQIVRAIGELARSIGAEGLVAGQVVDISSEGLSDVGLDRLEFIHVHKTAALLEGAVVLGAILGGASDDEVEKLRKFARYIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEKSKEFAAKLNKDAQDQLLGFDP 339
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BLAST of rna-XM_014655175.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445LKE2|A0A445LKE2_GLYSO (Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Glycine soja OX=3848 GN=D0Y65_003097 PE=3 SV=1)

HSP 1 Score: 572.007 bits (1473), Expect = 0.000e+0
Identity = 291/365 (79.73%), Postives = 316/365 (86.58%), Query Frame = 0 
Query:    1 MSAVNFNAWLHPSFTRSRSPTFLFHGLTNSPIPSFIVTKRQRDKLYSSSPFTLSALLTKEDTVETQEKP-AFNFKSYMVQKADAVNQALDDAVPLREPLRIHEAMRYSLLAGGKRVRPVLCVAACELVGGAAATAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAGATVGASPPRIVRALGELARAIGAEGLVAGQVVDIKSEGLDDVGLERLEFIHLHKTAALLEGAVVLGAILGGGTDEEIEKLRKFARYIGLLFQVVDDILDITKSSQELGKTAGKDLAADKVTYPKLLGIEKSKEFAAKLNKDAQDQLSGFDPVKAAPLVALANYIAYRQN 364
            MSA+N NAW  P           FH +    +P F VTKR+         F+LSA+LT    VET+EKP  F+FK+YM+ KA AVN+ALDD+V LREP +IHEAMRYSLLAGGKRVRPVLCVAACELVGG  ATAMPAACA+EMIHTMSLIHDDLPCMDNDDLRRGKPTNH VFGEDVAVLAGDALLAFAFEHIA +T GAS PRI+RA+GELAR+IG+EGLVAGQVVDI SEGL DVGLERLEFIH+HKTAALLEGAVVLGAILGGGTD+E+EKLRKFARYIGLLFQVVDDILD+TKSSQELGKTAGKDL ADKVTYPKLLGIEKSKEFAAKLNKDAQDQL+GFDPVKAAPL+ALANYIAYRQN
Sbjct:    1 MSALNLNAWPRPRSRSRSRSP-TFHAVNK--LPFFTVTKRR--------AFSLSAVLT----VETEEKPPIFDFKNYMLSKASAVNKALDDSVSLREPKKIHEAMRYSLLAGGKRVRPVLCVAACELVGGHEATAMPAACALEMIHTMSLIHDDLPCMDNDDLRRGKPTNHTVFGEDVAVLAGDALLAFAFEHIAASTRGASAPRILRAIGELARSIGSEGLVAGQVVDINSEGLADVGLERLEFIHVHKTAALLEGAVVLGAILGGGTDDEVEKLRKFARYIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEKSKEFAAKLNKDAQDQLAGFDPVKAAPLIALANYIAYRQN 350
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BLAST of rna-XM_014655175.2 vs. UniProtKB/TrEMBL
Match: tr|I1JCS7|I1JCS7_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100782362 PE=3 SV=1)

HSP 1 Score: 572.007 bits (1473), Expect = 0.000e+0
Identity = 291/365 (79.73%), Postives = 316/365 (86.58%), Query Frame = 0 
Query:    1 MSAVNFNAWLHPSFTRSRSPTFLFHGLTNSPIPSFIVTKRQRDKLYSSSPFTLSALLTKEDTVETQEKP-AFNFKSYMVQKADAVNQALDDAVPLREPLRIHEAMRYSLLAGGKRVRPVLCVAACELVGGAAATAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAGATVGASPPRIVRALGELARAIGAEGLVAGQVVDIKSEGLDDVGLERLEFIHLHKTAALLEGAVVLGAILGGGTDEEIEKLRKFARYIGLLFQVVDDILDITKSSQELGKTAGKDLAADKVTYPKLLGIEKSKEFAAKLNKDAQDQLSGFDPVKAAPLVALANYIAYRQN 364
            MSA+N NAW  P           FH +    +P F VTKR+         F+LSA+LT    VET+EKP  F+FK+YM+ KA AVN+ALDD+V LREP +IHEAMRYSLLAGGKRVRPVLCVAACELVGG  ATAMPAACA+EMIHTMSLIHDDLPCMDNDDLRRGKPTNH VFGEDVAVLAGDALLAFAFEHIA +T GAS PRI+RA+GELAR+IG+EGLVAGQVVDI SEGL DVGLERLEFIH+HKTAALLEGAVVLGAILGGGTD+E+EKLRKFARYIGLLFQVVDDILD+TKSSQELGKTAGKDL ADKVTYPKLLGIEKSKEFAAKLNKDAQDQL+GFDPVKAAPL+ALANYIAYRQN
Sbjct:    1 MSALNLNAWPRPRSRSRSRSP-TFHAVNK--LPFFTVTKRR--------AFSLSAVLT----VETEEKPPIFDFKNYMLSKASAVNKALDDSVSLREPKKIHEAMRYSLLAGGKRVRPVLCVAACELVGGHEATAMPAACALEMIHTMSLIHDDLPCMDNDDLRRGKPTNHTVFGEDVAVLAGDALLAFAFEHIAASTRGASAPRILRAIGELARSIGSEGLVAGQVVDINSEGLADVGLERLEFIHVHKTAALLEGAVVLGAILGGGTDDEVEKLRKFARYIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEKSKEFAAKLNKDAQDQLAGFDPVKAAPLIALANYIAYRQN 350
The following BLAST results are available for this feature:
BLAST of rna-XM_014655175.2 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
sp|Q94ID7|GGPPS_HEVBR0.000e+070.78Geranylgeranyl pyrophosphate synthase, chloroplast... [more]
sp|Q42698|GGPPS_CATRO0.000e+071.67Geranylgeranyl pyrophosphate synthase, chloroplast... [more]
sp|P34802|GGPP1_ARATH0.000e+069.27Heterodimeric geranylgeranyl pyrophosphate synthas... [more]
sp|Q43133|GGPPS_SINAL6.262e-17870.05Geranylgeranyl pyrophosphate synthase, chloroplast... [more]
sp|P80042|GGPPS_CAPAN1.145e-16769.19Geranylgeranyl pyrophosphate synthase, chloroplast... [more]
sp|Q9ZU77|GGPP7_ARATH4.418e-16769.10Geranylgeranyl pyrophosphate synthase 7, chloropla... [more]
sp|Q9LRR0|GGPP8_ARATH1.456e-14565.62Putative geranylgeranyl pyrophosphate synthase 8, ... [more]
sp|O04046|GGPP2_ARATH1.633e-14569.26Heterodimeric geranylgeranyl pyrophosphate synthas... [more]
sp|Q9SLG2|GGPP4_ARATH2.800e-14560.29Geranylgeranyl pyrophosphate synthase 4 OS=Arabido... [more]
sp|A0A0U3BRC5|GFDPS_LEUCN1.767e-14460.62Geranylfarnesyl diphosphate synthase, chloroplasti... [more]
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BLAST of rna-XM_014655175.2 vs. Araport11
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11)
Total hits: 10
Match NameE-valueIdentityDescription
AT4G36810.10.000e+069.27| geranylgeranyl pyrophosphate synthase 1 | Chr4:1... [more]
AT2G18620.14.520e-16869.10| Terpenoid synthases superfamily protein | Chr2:8... [more]
AT2G23800.11.671e-14669.26| geranylgeranyl pyrophosphate synthase 2 | Chr2:1... [more]
AT2G18640.12.865e-14660.29| geranylgeranyl pyrophosphate synthase 4 | Chr2:8... [more]
AT3G14550.32.102e-14266.09| geranylgeranyl pyrophosphate synthase 3 | Chr3:4... [more]
AT3G14550.22.102e-14266.09| geranylgeranyl pyrophosphate synthase 3 | Chr3:4... [more]
AT3G14550.12.102e-14266.09| geranylgeranyl pyrophosphate synthase 3 | Chr3:4... [more]
AT3G14530.12.538e-14067.07| Terpenoid synthases superfamily protein | Chr3:4... [more]
AT3G29430.11.464e-13964.27| Terpenoid synthases superfamily protein | Chr3:1... [more]
AT3G20160.11.652e-13864.88| Terpenoid synthases superfamily protein | Chr3:7... [more]
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BLAST of rna-XM_014655175.2 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S3UX51|A0A1S3UX51_VIGRR0.000e+0100.00geranylgeranyl pyrophosphate synthase, chloroplast... [more]
tr|A0A0L9TPC5|A0A0L9TPC5_PHAAN0.000e+098.08Uncharacterized protein OS=Phaseolus angularis OX=... [more]
tr|A0A4D6KY95|A0A4D6KY95_VIGUN0.000e+096.70Geranylgeranyl diphosphate synthase OS=Vigna ungui... [more]
tr|V7CCX8|V7CCX8_PHAVU0.000e+090.41Uncharacterized protein OS=Phaseolus vulgaris OX=3... [more]
tr|A0A445GIH7|A0A445GIH7_GLYSO0.000e+081.91Geranylgeranyl pyrophosphate synthase, chloroplast... [more]
tr|I1MNI2|I1MNI2_SOYBN0.000e+081.91Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|A0A6A5MJW2|A0A6A5MJW2_LUPAL0.000e+078.28Putative geranylgeranyl diphosphate synthase OS=Lu... [more]
tr|A0A371ERR2|A0A371ERR2_MUCPR0.000e+082.62Geranylgeranyl pyrophosphate synthase, chloroplast... [more]
tr|A0A445LKE2|A0A445LKE2_GLYSO0.000e+079.73Geranylgeranyl pyrophosphate synthase, chloroplast... [more]
tr|I1JCS7|I1JCS7_SOYBN0.000e+079.73Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0
Date Performed: 2023-06-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000092Polyprenyl synthetasePFAMPF00348polyprenyl_syntcoord: 100..334
e-value: 1.1E-57
score: 195.1
IPR000092Polyprenyl synthetaseCDDcd00685Trans_IPPS_HTcoord: 96..362
e-value: 1.87614E-90
score: 270.576
IPR008949Isoprenoid synthase domain superfamilyGENE3D1.10.600.10Farnesyl Diphosphate Synthasecoord: 65..364
e-value: 5.9E-108
score: 362.4
IPR008949Isoprenoid synthase domain superfamilySUPERFAMILY48576Terpenoid synthasescoord: 73..344
NoneNo IPR availableSFLDSFLDG01017Polyprenyl_Transferase_Likecoord: 76..362
e-value: 0.0
score: 292.7
NoneNo IPR availableSFLDSFLDS00005Isoprenoid_Synthase_Type_Icoord: 76..362
e-value: 0.0
score: 292.7
NoneNo IPR availablePANTHERPTHR43281FARNESYL DIPHOSPHATE SYNTHASEcoord: 49..364

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-XM_014655175.2_VrVC1973A-SNU_v1 ID=rna-XM_014655175.2_VrVC1973A-SNU_v1; Name=rna-XM_014655175.2; organism=Vigna radiata; type=mRNA; length=1095bp
ATGAGTGCCGTTAATTTTAACGCATGGCTACACCCCAGCTTCACCAGATC
CAGATCCCCAACTTTTCTATTTCACGGCCTCACTAACTCCCCCATTCCTT
CCTTCATCGTCACCAAACGCCAAAGAGATAAGCTTTATTCCTCCTCGCCT
TTCACTCTCTCCGCACTCCTCACCAAAGAGGACACTGTTGAGACCCAAGA
GAAGCCGGCGTTTAACTTCAAGTCCTACATGGTCCAGAAAGCCGACGCCG
TCAATCAGGCGCTTGATGACGCCGTTCCCCTCCGCGAGCCGCTGCGGATC
CACGAGGCCATGCGCTACTCCCTCCTCGCCGGTGGCAAGCGCGTACGCCC
CGTCCTCTGCGTCGCCGCCTGCGAGCTCGTCGGAGGAGCCGCCGCCACCG
CGATGCCCGCTGCCTGCGCCGTCGAGATGATCCACACCATGTCCCTCATC
CACGATGACCTCCCCTGCATGGACAACGACGACCTCCGCCGCGGTAAACC
TACCAACCACAAGGTCTTCGGGGAGGACGTCGCTGTCCTCGCCGGCGACG
CGCTCCTCGCATTTGCCTTCGAGCACATCGCCGGGGCCACCGTCGGTGCC
TCCCCGCCTCGCATCGTCCGCGCCCTCGGGGAGCTCGCACGAGCCATCGG
CGCCGAGGGACTCGTCGCCGGCCAGGTGGTCGACATCAAATCCGAGGGGC
TTGACGACGTTGGCCTCGAACGCTTGGAGTTCATCCATCTCCACAAGACG
GCGGCCCTGCTGGAAGGCGCGGTGGTCCTTGGCGCCATCCTGGGCGGTGG
AACCGACGAGGAGATTGAGAAATTGAGGAAGTTTGCGAGGTATATAGGAT
TGTTGTTTCAGGTGGTTGATGACATTCTGGATATTACGAAGTCTTCCCAG
GAATTGGGGAAAACTGCGGGGAAGGATCTTGCGGCTGATAAGGTTACTTA
TCCCAAGCTTTTGGGGATTGAGAAGTCTAAGGAGTTTGCTGCCAAATTGA
ACAAAGATGCTCAGGATCAGCTTTCTGGCTTTGACCCTGTCAAGGCTGCT
CCTTTAGTTGCTTTAGCCAATTACATTGCTTATAGGCAGAACTAG
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protein sequence of rna-XM_014655175.2_VrVC1973A-SNU_v1

>rna-XM_014655175.2_VrVC1973A-SNU_v1 ID=rna-XM_014655175.2_VrVC1973A-SNU_v1; Name=rna-XM_014655175.2_VrVC1973A-SNU_v1; organism=Vigna radiata; type=polypeptide; length=364bp
MSAVNFNAWLHPSFTRSRSPTFLFHGLTNSPIPSFIVTKRQRDKLYSSSP
FTLSALLTKEDTVETQEKPAFNFKSYMVQKADAVNQALDDAVPLREPLRI
HEAMRYSLLAGGKRVRPVLCVAACELVGGAAATAMPAACAVEMIHTMSLI
HDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAGATVGA
SPPRIVRALGELARAIGAEGLVAGQVVDIKSEGLDDVGLERLEFIHLHKT
AALLEGAVVLGAILGGGTDEEIEKLRKFARYIGLLFQVVDDILDITKSSQ
ELGKTAGKDLAADKVTYPKLLGIEKSKEFAAKLNKDAQDQLSGFDPVKAA
PLVALANYIAYRQN
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mRNA from alignment at chr07:946323..947787-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-XM_014655175.2_VrVC1973A-SNU_v1 ID=rna-XM_014655175.2_VrVC1973A-SNU_v1; Name=rna-XM_014655175.2; organism=Vigna radiata; type=mRNA; length=1465bp; location=Sequence derived from: chr07:946323..947787- (Vigna radiata
AATAGATAGATAGATAGATGATAGTTTATGCTATCTGCTGTTGTAGTTGA
ATAAACCAATCCAAAGTAATTGAGTAATTGGTGCAAGTGGAAGGAAGGCT
TTGCTTATCCACTCACTACTCACTACTCGCCATTCACCATTCAGCACCCC
TTGTATTATTTTTCCTTCGCCACCCTAATGCAATGCATAAACTCTTATAG
TTCTCACCAAAGCCCAAACCTTTCAATCTAACCAAACAGATTCTCAGAAC
CCCCACCATGAGTGCCGTTAATTTTAACGCATGGCTACACCCCAGCTTCA
CCAGATCCAGATCCCCAACTTTTCTATTTCACGGCCTCACTAACTCCCCC
ATTCCTTCCTTCATCGTCACCAAACGCCAAAGAGATAAGCTTTATTCCTC
CTCGCCTTTCACTCTCTCCGCACTCCTCACCAAAGAGGACACTGTTGAGA
CCCAAGAGAAGCCGGCGTTTAACTTCAAGTCCTACATGGTCCAGAAAGCC
GACGCCGTCAATCAGGCGCTTGATGACGCCGTTCCCCTCCGCGAGCCGCT
GCGGATCCACGAGGCCATGCGCTACTCCCTCCTCGCCGGTGGCAAGCGCG
TACGCCCCGTCCTCTGCGTCGCCGCCTGCGAGCTCGTCGGAGGAGCCGCC
GCCACCGCGATGCCCGCTGCCTGCGCCGTCGAGATGATCCACACCATGTC
CCTCATCCACGATGACCTCCCCTGCATGGACAACGACGACCTCCGCCGCG
GTAAACCTACCAACCACAAGGTCTTCGGGGAGGACGTCGCTGTCCTCGCC
GGCGACGCGCTCCTCGCATTTGCCTTCGAGCACATCGCCGGGGCCACCGT
CGGTGCCTCCCCGCCTCGCATCGTCCGCGCCCTCGGGGAGCTCGCACGAG
CCATCGGCGCCGAGGGACTCGTCGCCGGCCAGGTGGTCGACATCAAATCC
GAGGGGCTTGACGACGTTGGCCTCGAACGCTTGGAGTTCATCCATCTCCA
CAAGACGGCGGCCCTGCTGGAAGGCGCGGTGGTCCTTGGCGCCATCCTGG
GCGGTGGAACCGACGAGGAGATTGAGAAATTGAGGAAGTTTGCGAGGTAT
ATAGGATTGTTGTTTCAGGTGGTTGATGACATTCTGGATATTACGAAGTC
TTCCCAGGAATTGGGGAAAACTGCGGGGAAGGATCTTGCGGCTGATAAGG
TTACTTATCCCAAGCTTTTGGGGATTGAGAAGTCTAAGGAGTTTGCTGCC
AAATTGAACAAAGATGCTCAGGATCAGCTTTCTGGCTTTGACCCTGTCAA
GGCTGCTCCTTTAGTTGCTTTAGCCAATTACATTGCTTATAGGCAGAACT
AGATTGTTGAACTTTGTTACAAATTAACAATTATTTACAAAATTTAGATT
TATGAAGCCATTCTATATGCTTACTGCAGTTCAGCTATGGATTATAATAA
TCCCCGTGCCCATCC
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Coding sequence (CDS) from alignment at chr07:946323..947787-

>rna-XM_014655175.2_VrVC1973A-SNU_v1 ID=rna-XM_014655175.2_VrVC1973A-SNU_v1; Name=rna-XM_014655175.2; organism=Vigna radiata; type=CDS; length=1095bp; location=Sequence derived from: chr07:946323..947787- (Vigna radiata
ATGAGTGCCGTTAATTTTAACGCATGGCTACACCCCAGCTTCACCAGATC
CAGATCCCCAACTTTTCTATTTCACGGCCTCACTAACTCCCCCATTCCTT
CCTTCATCGTCACCAAACGCCAAAGAGATAAGCTTTATTCCTCCTCGCCT
TTCACTCTCTCCGCACTCCTCACCAAAGAGGACACTGTTGAGACCCAAGA
GAAGCCGGCGTTTAACTTCAAGTCCTACATGGTCCAGAAAGCCGACGCCG
TCAATCAGGCGCTTGATGACGCCGTTCCCCTCCGCGAGCCGCTGCGGATC
CACGAGGCCATGCGCTACTCCCTCCTCGCCGGTGGCAAGCGCGTACGCCC
CGTCCTCTGCGTCGCCGCCTGCGAGCTCGTCGGAGGAGCCGCCGCCACCG
CGATGCCCGCTGCCTGCGCCGTCGAGATGATCCACACCATGTCCCTCATC
CACGATGACCTCCCCTGCATGGACAACGACGACCTCCGCCGCGGTAAACC
TACCAACCACAAGGTCTTCGGGGAGGACGTCGCTGTCCTCGCCGGCGACG
CGCTCCTCGCATTTGCCTTCGAGCACATCGCCGGGGCCACCGTCGGTGCC
TCCCCGCCTCGCATCGTCCGCGCCCTCGGGGAGCTCGCACGAGCCATCGG
CGCCGAGGGACTCGTCGCCGGCCAGGTGGTCGACATCAAATCCGAGGGGC
TTGACGACGTTGGCCTCGAACGCTTGGAGTTCATCCATCTCCACAAGACG
GCGGCCCTGCTGGAAGGCGCGGTGGTCCTTGGCGCCATCCTGGGCGGTGG
AACCGACGAGGAGATTGAGAAATTGAGGAAGTTTGCGAGGTATATAGGAT
TGTTGTTTCAGGTGGTTGATGACATTCTGGATATTACGAAGTCTTCCCAG
GAATTGGGGAAAACTGCGGGGAAGGATCTTGCGGCTGATAAGGTTACTTA
TCCCAAGCTTTTGGGGATTGAGAAGTCTAAGGAGTTTGCTGCCAAATTGA
ACAAAGATGCTCAGGATCAGCTTTCTGGCTTTGACCCTGTCAAGGCTGCT
CCTTTAGTTGCTTTAGCCAATTACATTGCTTATAGGCAGAACTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR000092Polyprenyl_synt
IPR008949Isoprenoid_synthase_dom_sf
Vocabulary: Biological Process
TermDefinition
GO:0008299isoprenoid biosynthetic process