rna-XM_014656989.2

Transcript Overview
Namerna-XM_014656989.2
Unique Namerna-XM_014656989.2_VrVC1973A-SNU_v1
TypemRNA
OrganismVigna radiata (Mung bean, green gram)
Sequence length300
Productindole-3-acetic acid-induced protein ARG2
References
External references for this mRNA
DatabaseAccession
GeneID106771089
GenbankXM_014656989.2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr08chromosomechr08:28125721..28126629 +Vigna radiata cv. VC1973A genome v6.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
asvrvL258Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anvrvL0431Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvrvL455Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anvrvL0658Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL0804Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL0809Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL0816Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL1116Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
caivrvL430Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavrvL232Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavrvL362Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvrvL0559Cajanus cajan Asha genome v1.0Cajanus cajan
ccvrvL0658Cajanus cajan Asha genome v1.0Cajanus cajan
ccvrvL0676Cajanus cajan Asha genome v1.0Cajanus cajan
crvrvL273Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crvrvL412Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
psvrvL232Pisum sativum Cameor genome v1aPisum sativum
pvvrvL058Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
psvrvL562Pisum sativum Cameor genome v1aPisum sativum
pvvrvL592Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
tifvrvL414Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvrvL603Vicia faba cv. Tiffany genome v1.0Vicia faba
vrvvrvL133Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvrvL428Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvrvL610Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvssR791Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvssR810Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvzwsR636Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvvuaR535Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvzwsR682Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvvuR576Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vrvvuaR575Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvvuR624Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canvrvL212Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvrvL336Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvrvL316Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvrvL217Cicer arietinum
carvrvL332Cicer arietinum
ccavrvL238Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavrvL375Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vrvvumR620Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvumR663Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvvaR720Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvvaR803Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvstR639Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vrvvstR683Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvrvL408Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvrvL583Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvrvL050Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvrvL553Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vrvvunR541Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vrvvunR584Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
PvulFLAVERTChr01.1320Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
jg31441.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
ARG2Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Vigun01g192300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
XM_058914310.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
rna-KK1_027216Cajanus cajan Asha genome v1.0Cajanus cajan
Psat03G0097400-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
rna-XM_004494323.2Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
LR48_mrnaVigan03g283900Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vigst.08G155800.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
LR48_mrnaVigan10g029000Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Psat6g164600.1Pisum sativum Cameor genome v1aPisum sativum
rna-TanjilR_16931Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Phvul.001G207800.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Ca_00969Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Cc_v2.0_08212.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Va02G037810.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vigun07g120900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Cr_05547.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
evm.model.Chr01.1832Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vigun07g120900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Ca_09857.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
evm.model.Chr07.2752Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Phvul.007G218700.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vigst.04G240400.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vfaba.Tiffany.R1.5g130240.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vfaba.Hedin2.R1.5g163080.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vum_08G01937.1Vigna umbellata FF25 genome v1.0Vigna umbellata
rna-KK1_006913Cajanus cajan Asha genome v1.0Cajanus cajan
Cr_08228.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Vigun01g192300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vum_04G02703.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vigan.08G251400.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vigan.04G393600.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
jg2733.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Cc_v2.0_03707.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Psat06G0449100-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
rna-TanjilR_16486Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
XM_058882874.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Ca_03471Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
rna-XM_004495885.2Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-XM_014639558.1Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LOC106771089gene-LOC106771089_VrVC1973A-SNU_v1Vigna radiatagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_014656989.2-1exon-XM_014656989.2-1_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_014656989.2-2exon-XM_014656989.2-2_VrVC1973A-SNU_v1Vigna radiataexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-XP_014512475.1cds-XP_014512475.1_VrVC1973A-SNU_v1Vigna radiataCDS
cds-XP_014512475.1cds-XP_014512475.1_VrVC1973A-SNU_v1_2Vigna radiataCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-XM_014656989.2_VrVC1973A-SNU_v1rna-XM_014656989.2_VrVC1973A-SNU_v1Vigna radiatapolypeptide
rna-XM_014656989.2_VrVC1973A-SNU_v1rna-XM_014656989.2_VrVC1973A-SNU_v1-proteinVigna radiatapolypeptide


Homology
[Close]
BLAST of rna-XM_014656989.2 vs. UniProtKB/Swiss-Prot
Match: sp|P32292|ARG2_VIGRR (Indole-3-acetic acid-induced protein ARG2 OS=Vigna radiata var. radiata OX=3916 GN=ARG2 PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 5.405e-61
Identity = 95/99 (95.96%), Postives = 96/99 (96.97%), Query Frame = 0 
Query:    1 MARSFTNVKVLSALVAHGFSNTATRRGFAAAAAATQSATRGGASIGGNMVPKSGEEKVRGGEKVSWVPDPVTGYYRPENTNEIDVADLRATVLGKKFNQ 99
            MARSFTNVKVLSALVA GFSNT TR GFAAAAAATQSATRGGASIGGNMVPKSGEEKVRGGEKVSWVPDPVTGYYRPENTNEIDVAD+RATVLGKKFNQ
Sbjct:    1 MARSFTNVKVLSALVADGFSNTTTRHGFAAAAAATQSATRGGASIGGNMVPKSGEEKVRGGEKVSWVPDPVTGYYRPENTNEIDVADMRATVLGKKFNQ 99
[Close]
BLAST of rna-XM_014656989.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q93WF6|SAG21_ARATH (Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SAG21 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.790e-22
Identity = 47/98 (47.96%), Postives = 64/98 (65.31%), Query Frame = 0 
Query:    1 MARSFTNVKVLSALVAHGFSNTATRRGFAAAAA-ATQSATRGGASIGGNMVPKSGEEKVRGGEKVSWVPDPVTGYYRPEN-TNEIDVADLRATVLGKK 96
            MARS +NVK++SA V+   SN   RRG+AA AA  + S+     ++   ++ K G E+    +K+SWVPDP TGYYRPE  +NEID A+LRA +L  K
Sbjct:    1 MARSISNVKIVSAFVSRELSNAIFRRGYAATAAQGSVSSGGRSGAVASAVMKKKGVEE--STQKISWVPDPKTGYYRPETGSNEIDAAELRAALLNNK 96
[Close]
BLAST of rna-XM_014656989.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9SRX6|LEA2_ARATH (Late embryogenis abundant protein 2 OS=Arabidopsis thaliana OX=3702 GN=LEA2 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.900e-18
Identity = 46/97 (47.42%), Postives = 55/97 (56.70%), Query Frame = 0 
Query:    1 MARSFTNVKVLSALVAHGFSNTATRRGFAAAAAATQSATRGGASIGGNMVPKSGEEKVRGGEKVSWVPDPVTGYYRPEN-TNEIDVADLRATVLGKK 96
            MARS  N K+ S   +   SN   RRGFAAAA   ++A  G  S    M  ++GE      EK  WVPDP TGYYRPE  + EID A+LRA +L  K
Sbjct:    1 MARSLANAKIQSVFGSEKLSNAVFRRGFAAAA---KTALDGSVSTA-EMKKRAGEA---SSEKAPWVPDPKTGYYRPETVSEEIDPAELRAILLNNK 90
[Close]
BLAST of rna-XM_014656989.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q39644|LEA5_CITSI (Late embryogenesis abundant protein Lea5 OS=Citrus sinensis OX=2711 GN=LEA5 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.364e-16
Identity = 43/97 (44.33%), Postives = 56/97 (57.73%), Query Frame = 0 
Query:    1 MARSFTNVKVLSALVAHGFSNTATRRGFAAAAAATQSATRGGASIGGNMVPKSGEEKVRGGEKVSWVPDPVTGYYRPENTN-EIDVADLRATVLGKK 96
            MARS    K+L A VA G S + +RRG+AAAA    + +R G     ++ P   E+    G   +W PDP+TGYYRPEN   EID A+LR  +L  K
Sbjct:    1 MARSLFKAKLLLAPVADGISLSISRRGYAAAAP-LGTISRTGIMEKNDLRPAVRED---SGASSAWAPDPITGYYRPENRAVEIDPAELREMLLNHK 93
[Close]
BLAST of rna-XM_014656989.2 vs. UniProtKB/Swiss-Prot
Match: sp|P46522|LEA5D_GOSHI (Late embryogenesis abundant protein Lea5-D OS=Gossypium hirsutum OX=3635 GN=LEA5-D PE=2 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 1.346e-13
Identity = 37/101 (36.63%), Postives = 55/101 (54.46%), Query Frame = 0 
Query:    1 MARSFTNVKVLSALVAHGFSNTATRRGFAAAAAATQSATRGGASIGGNMVPKSGEEKVRGGE----KVSWVPDPVTGYYRPENTN-EIDVADLRATVLGKK 96
            MARS ++ K+L A +  G   + +RRG++ A  A  +A+ G     G +  +   ++    E      +W PDPVTGYYRPEN   EID A+LR  +L  +
Sbjct:    1 MARSVSSFKLLGASIFDGLYVSISRRGYSGAPPAAVTASFGRPGAMGKVERRDAMKESSSSETRAYSSAWAPDPVTGYYRPENCGAEIDAAELREMLLNHR 101
[Close]
BLAST of rna-XM_014656989.2 vs. UniProtKB/Swiss-Prot
Match: sp|P46521|LEA5A_GOSHI (Late embryogenesis abundant protein Lea5-A OS=Gossypium hirsutum OX=3635 GN=LEA5-A PE=2 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 4.022e-13
Identity = 38/101 (37.62%), Postives = 53/101 (52.48%), Query Frame = 0 
Query:    1 MARSFTNVKVLSALVAHGFSNTATRRGFAAAAAATQSATRGGASIGGNMVPKSGEEKVRGGE----KVSWVPDPVTGYYRPENTN-EIDVADLRATVLGKK 96
            MARS ++ K L A V      + +RRG++ A  A  +A+ G     G +  +   ++    E      +W PDPVTGYYRPEN   EID ADLR  +L  +
Sbjct:    1 MARSVSSFKFLGASVFDALYVSISRRGYSGAPPAAVTASFGRPGAMGKVERRYAMKESSSSETRAYSSAWAPDPVTGYYRPENCGAEIDAADLREMMLNHR 101
[Close]
BLAST of rna-XM_014656989.2 vs. Araport11
Match: AT4G02380.1 (| senescence-associated gene 21 | Chr4:1046414-1046807 REVERSE LENGTH=97 | 201606)

HSP 1 Score: 85.8853 bits (211), Expect = 2.854e-23
Identity = 47/98 (47.96%), Postives = 64/98 (65.31%), Query Frame = 0 
Query:    1 MARSFTNVKVLSALVAHGFSNTATRRGFAAAAA-ATQSATRGGASIGGNMVPKSGEEKVRGGEKVSWVPDPVTGYYRPEN-TNEIDVADLRATVLGKK 96
            MARS +NVK++SA V+   SN   RRG+AA AA  + S+     ++   ++ K G E+    +K+SWVPDP TGYYRPE  +NEID A+LRA +L  K
Sbjct:    1 MARSISNVKIVSAFVSRELSNAIFRRGYAATAAQGSVSSGGRSGAVASAVMKKKGVEE--STQKISWVPDPKTGYYRPETGSNEIDAAELRAALLNNK 96
[Close]
BLAST of rna-XM_014656989.2 vs. Araport11
Match: AT4G02380.3 (| senescence-associated gene 21 | Chr4:1046414-1047092 REVERSE LENGTH=192 | 201606)

HSP 1 Score: 86.6557 bits (213), Expect = 1.565e-22
Identity = 47/98 (47.96%), Postives = 64/98 (65.31%), Query Frame = 0 
Query:    1 MARSFTNVKVLSALVAHGFSNTATRRGFAAAAA-ATQSATRGGASIGGNMVPKSGEEKVRGGEKVSWVPDPVTGYYRPEN-TNEIDVADLRATVLGKK 96
            MARS +NVK++SA V+   SN   RRG+AA AA  + S+     ++   ++ K G E+    +K+SWVPDP TGYYRPE  +NEID A+LRA +L  K
Sbjct:   96 MARSISNVKIVSAFVSRELSNAIFRRGYAATAAQGSVSSGGRSGAVASAVMKKKGVEE--STQKISWVPDPKTGYYRPETGSNEIDAAELRAALLNNK 191
[Close]
BLAST of rna-XM_014656989.2 vs. Araport11
Match: AT1G02820.1 (| Late embryogenesis abundant 3 (LEA3) family protein | Chr1:623933-624304 REVERSE LENGTH=91 | 201606)

HSP 1 Score: 75.485 bits (184), Expect = 2.967e-19
Identity = 46/97 (47.42%), Postives = 55/97 (56.70%), Query Frame = 0 
Query:    1 MARSFTNVKVLSALVAHGFSNTATRRGFAAAAAATQSATRGGASIGGNMVPKSGEEKVRGGEKVSWVPDPVTGYYRPEN-TNEIDVADLRATVLGKK 96
            MARS  N K+ S   +   SN   RRGFAAAA   ++A  G  S    M  ++GE      EK  WVPDP TGYYRPE  + EID A+LRA +L  K
Sbjct:    1 MARSLANAKIQSVFGSEKLSNAVFRRGFAAAA---KTALDGSVSTA-EMKKRAGEA---SSEKAPWVPDPKTGYYRPETVSEEIDPAELRAILLNNK 90
[Close]
BLAST of rna-XM_014656989.2 vs. Araport11
Match: AT4G02380.2 (| senescence-associated gene 21 | Chr4:1046414-1046746 REVERSE LENGTH=78 | 201606)

HSP 1 Score: 60.4622 bits (145), Expect = 1.769e-13
Identity = 34/74 (45.95%), Postives = 48/74 (64.86%), Query Frame = 0 
Query:   25 RRGFAAAAA-ATQSATRGGASIGGNMVPKSGEEKVRGGEKVSWVPDPVTGYYRPEN-TNEIDVADLRATVLGKK 96
            +RG+AA AA  + S+     ++   ++ K G E+    +K+SWVPDP TGYYRPE  +NEID A+LRA +L  K
Sbjct:    6 KRGYAATAAQGSVSSGGRSGAVASAVMKKKGVEE--STQKISWVPDPKTGYYRPETGSNEIDAAELRAALLNNK 77
[Close]
BLAST of rna-XM_014656989.2 vs. Araport11
Match: AT4G15910.1 (| drought-induced 21 | Chr4:9028657-9029269 FORWARD LENGTH=104 | 201606)

HSP 1 Score: 51.9878 bits (123), Expect = 7.633e-10
Identity = 39/101 (38.61%), Postives = 54/101 (53.47%), Query Frame = 0 
Query:    2 ARSFTN-VKVLSALVAHGFS-NTATRRGFAAAAAATQSATRGGASIGGNMVPKSGEEKVRGGEK---VSWVPDPVTGYYRPEN-TNEIDVADLRATVLGKK 96
            ARS +  VK L +  +   S +   RR + A    +Q+ T  G S GG+     G+ + RG ++    +W PDPVTGYYRP N   EID A+LR  +L  K
Sbjct:    3 ARSLSGAVKSLCSAASGSLSCSIVLRRSYVAT---SQNVTAAGLSKGGSTRVMVGKMEQRGLDQEAESAWGPDPVTGYYRPSNRAAEIDPAELRELLLKNK 100
[Close]
BLAST of rna-XM_014656989.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3V2E7|A0A1S3V2E7_VIGRR (indole-3-acetic acid-induced protein ARG2 OS=Vigna radiata var. radiata OX=3916 GN=LOC106771089 PE=4 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 1.000e-65
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0 
Query:    1 MARSFTNVKVLSALVAHGFSNTATRRGFAAAAAATQSATRGGASIGGNMVPKSGEEKVRGGEKVSWVPDPVTGYYRPENTNEIDVADLRATVLGKKFNQ 99
            MARSFTNVKVLSALVAHGFSNTATRRGFAAAAAATQSATRGGASIGGNMVPKSGEEKVRGGEKVSWVPDPVTGYYRPENTNEIDVADLRATVLGKKFNQ
Sbjct:    1 MARSFTNVKVLSALVAHGFSNTATRRGFAAAAAATQSATRGGASIGGNMVPKSGEEKVRGGEKVSWVPDPVTGYYRPENTNEIDVADLRATVLGKKFNQ 99
[Close]
BLAST of rna-XM_014656989.2 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6MYN6|A0A4D6MYN6_VIGUN (Late embryogenesis abundant protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG9g1617 PE=4 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 4.981e-58
Identity = 92/99 (92.93%), Postives = 92/99 (92.93%), Query Frame = 0 
Query:    1 MARSFTNVKVLSALVAHGFSNTATRRGFAAAAAATQSATRGGASIGGNMVPKSGEEKVRGGEKVSWVPDPVTGYYRPENTNEIDVADLRATVLGKKFNQ 99
            MARSF NVKVLSALVA GFSNT TRRGFAAAA  TQSATRGGASIGGNMVPKSGEEKVRGGEKVSWVPDPVTGYYRPENTNEIDVADLRA VLGKKFN 
Sbjct:    1 MARSFANVKVLSALVADGFSNTLTRRGFAAAA--TQSATRGGASIGGNMVPKSGEEKVRGGEKVSWVPDPVTGYYRPENTNEIDVADLRAMVLGKKFNH 97
[Close]
BLAST of rna-XM_014656989.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3SSD4|A0A0S3SSD4_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.08G251400 PE=4 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 2.426e-53
Identity = 92/101 (91.09%), Postives = 93/101 (92.08%), Query Frame = 0 
Query:    1 MARSFTNVKVLSALVAHGFSNTATRRGFAAAAAA--TQSATRGGASIGGNMVPKSGEEKVRGGEKVSWVPDPVTGYYRPENTNEIDVADLRATVLGKKFNQ 99
            MARSFTNVKVLSALVA GFSNT TRRGFAAAAAA  TQSA+RGGASI GNMVPKSGEEKVRG EKVSWVPDPVTGYYRPENTNEIDVADLRATVLG KFN 
Sbjct:    1 MARSFTNVKVLSALVADGFSNTPTRRGFAAAAAAAATQSASRGGASISGNMVPKSGEEKVRGAEKVSWVPDPVTGYYRPENTNEIDVADLRATVLGGKFNH 101
[Close]
BLAST of rna-XM_014656989.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9VHC2|A0A0L9VHC2_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan10g029000 PE=4 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 2.426e-53
Identity = 92/101 (91.09%), Postives = 93/101 (92.08%), Query Frame = 0 
Query:    1 MARSFTNVKVLSALVAHGFSNTATRRGFAAAAAA--TQSATRGGASIGGNMVPKSGEEKVRGGEKVSWVPDPVTGYYRPENTNEIDVADLRATVLGKKFNQ 99
            MARSFTNVKVLSALVA GFSNT TRRGFAAAAAA  TQSA+RGGASI GNMVPKSGEEKVRG EKVSWVPDPVTGYYRPENTNEIDVADLRATVLG KFN 
Sbjct:    1 MARSFTNVKVLSALVADGFSNTPTRRGFAAAAAAAATQSASRGGASISGNMVPKSGEEKVRGAEKVSWVPDPVTGYYRPENTNEIDVADLRATVLGGKFNH 101
[Close]
BLAST of rna-XM_014656989.2 vs. UniProtKB/TrEMBL
Match: tr|V7BH20|V7BH20_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_007G218700g PE=4 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.246e-48
Identity = 87/100 (87.00%), Postives = 89/100 (89.00%), Query Frame = 0 
Query:    1 MARSFTNVKVLSALVAHGFSNTATRRGFAAAAAATQSATRGG-ASIGGNMVPKSGEEKVRGGEKVSWVPDPVTGYYRPENTNEIDVADLRATVLGKKFNQ 99
            MARSFT VKVLSALVA GFSNT TRRGFAAAAA TQSATRGG ASI GN+ PKSGEEK RG EKVSWVPDPVTGYY+PENTNEIDVADLRA VLGKKFN 
Sbjct:    1 MARSFTTVKVLSALVADGFSNTLTRRGFAAAAA-TQSATRGGGASISGNITPKSGEEKGRGAEKVSWVPDPVTGYYKPENTNEIDVADLRAMVLGKKFNH 99
[Close]
BLAST of rna-XM_014656989.2 vs. UniProtKB/TrEMBL
Match: tr|C6T331|C6T331_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100527032 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 9.327e-46
Identity = 80/101 (79.21%), Postives = 86/101 (85.15%), Query Frame = 0 
Query:    1 MARSFTNVKVLSALVAHGFSNTATRRGFAAAAAATQSATRGGA-SIGGNMVPKSGEEKVRGG-EKVSWVPDPVTGYYRPENTNEIDVADLRATVLGKKFNQ 99
            MARSF+NVKVLSALVA GFSNT TRRG+AAA   TQSATRGGA SI   + PKSGE+KV GG EKVSWVPDPVTGYY+PEN  EIDVA+LRATVLGKKFN 
Sbjct:    1 MARSFSNVKVLSALVADGFSNTLTRRGYAAA---TQSATRGGAASISSKIAPKSGEDKVGGGAEKVSWVPDPVTGYYKPENIKEIDVAELRATVLGKKFNH 98
[Close]
BLAST of rna-XM_014656989.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2PM81|A0A0B2PM81_GLYSO (Indole-3-acetic acid-induced protein ARG2 OS=Glycine soja OX=3848 GN=D0Y65_002698 PE=4 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 9.327e-46
Identity = 80/101 (79.21%), Postives = 86/101 (85.15%), Query Frame = 0 
Query:    1 MARSFTNVKVLSALVAHGFSNTATRRGFAAAAAATQSATRGGA-SIGGNMVPKSGEEKVRGG-EKVSWVPDPVTGYYRPENTNEIDVADLRATVLGKKFNQ 99
            MARSF+NVKVLSALVA GFSNT TRRG+AAA   TQSATRGGA SI   + PKSGE+KV GG EKVSWVPDPVTGYY+PEN  EIDVA+LRATVLGKKFN 
Sbjct:    1 MARSFSNVKVLSALVADGFSNTLTRRGYAAA---TQSATRGGAASISSKIAPKSGEDKVGGGAEKVSWVPDPVTGYYKPENIKEIDVAELRATVLGKKFNH 98
[Close]
BLAST of rna-XM_014656989.2 vs. UniProtKB/TrEMBL
Match: tr|A0A371H3F3|A0A371H3F3_MUCPR (Indole-3-acetic acid-induced protein ARG2 OS=Mucuna pruriens OX=157652 GN=ARG2 PE=4 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 4.392e-45
Identity = 77/100 (77.00%), Postives = 83/100 (83.00%), Query Frame = 0 
Query:    1 MARSFTNVKVLSALVAHGFSNTATRRGFAAAAAATQSATRGG-ASIGGNMVPKSGEEKVRGGEKVSWVPDPVTGYYRPENTNEIDVADLRATVLGKKFNQ 99
            MARSFTNVKVLSALV  GFSNT TRRG+AAA   TQSATRGG AS+   + PKSGE+KV G EKVSWVPDPVTGYY+PEN  EIDVA+LRATVLG KFN 
Sbjct:    1 MARSFTNVKVLSALVTDGFSNTLTRRGYAAA---TQSATRGGGASMSSKIAPKSGEDKVGGAEKVSWVPDPVTGYYKPENIKEIDVAELRATVLGNKFNH 97
[Close]
BLAST of rna-XM_014656989.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445IH75|A0A445IH75_GLYSO (Indole-3-acetic acid-induced protein ARG2 OS=Glycine soja OX=3848 GN=D0Y65_025732 PE=4 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 4.998e-42
Identity = 78/102 (76.47%), Postives = 84/102 (82.35%), Query Frame = 0 
Query:    1 MARSFTNVKVLSALVAHGFSNTATRRGFAAAAAATQSATRGGA-SIGGNMVPKSGEEKVRGG--EKVSWVPDPVTGYYRPENTNEIDVADLRATVLGKKFNQ 99
            MARSF+N+KVLSALVA GFSNT TRRG+A A   TQSATRGGA SI G    KSGE+KV GG  EKVSWVPDPVTGYY+PEN  EIDVA+LRATVLGKKFN 
Sbjct:    1 MARSFSNLKVLSALVADGFSNTLTRRGYAVA---TQSATRGGAASISG----KSGEDKVLGGGAEKVSWVPDPVTGYYKPENIKEIDVAELRATVLGKKFNH 95
[Close]
BLAST of rna-XM_014656989.2 vs. UniProtKB/TrEMBL
Match: tr|C6SZ33|C6SZ33_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100306369 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 4.998e-42
Identity = 78/102 (76.47%), Postives = 84/102 (82.35%), Query Frame = 0 
Query:    1 MARSFTNVKVLSALVAHGFSNTATRRGFAAAAAATQSATRGGA-SIGGNMVPKSGEEKVRGG--EKVSWVPDPVTGYYRPENTNEIDVADLRATVLGKKFNQ 99
            MARSF+N+KVLSALVA GFSNT TRRG+A A   TQSATRGGA SI G    KSGE+KV GG  EKVSWVPDPVTGYY+PEN  EIDVA+LRATVLGKKFN 
Sbjct:    1 MARSFSNLKVLSALVADGFSNTLTRRGYAVA---TQSATRGGAASISG----KSGEDKVLGGGAEKVSWVPDPVTGYYKPENIKEIDVAELRATVLGKKFNH 95
The following BLAST results are available for this feature:
BLAST of rna-XM_014656989.2 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot)
Total hits: 6
Match NameE-valueIdentityDescription
sp|P32292|ARG2_VIGRR5.405e-6195.96Indole-3-acetic acid-induced protein ARG2 OS=Vigna... [more]
sp|Q93WF6|SAG21_ARATH2.790e-2247.96Protein SENESCENCE-ASSOCIATED GENE 21, mitochondri... [more]
sp|Q9SRX6|LEA2_ARATH2.900e-1847.42Late embryogenis abundant protein 2 OS=Arabidopsis... [more]
sp|Q39644|LEA5_CITSI1.364e-1644.33Late embryogenesis abundant protein Lea5 OS=Citrus... [more]
sp|P46522|LEA5D_GOSHI1.346e-1336.63Late embryogenesis abundant protein Lea5-D OS=Goss... [more]
sp|P46521|LEA5A_GOSHI4.022e-1337.62Late embryogenesis abundant protein Lea5-A OS=Goss... [more]
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BLAST of rna-XM_014656989.2 vs. Araport11
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11)
Total hits: 5
Match NameE-valueIdentityDescription
AT4G02380.12.854e-2347.96| senescence-associated gene 21 | Chr4:1046414-104... [more]
AT4G02380.31.565e-2247.96| senescence-associated gene 21 | Chr4:1046414-104... [more]
AT1G02820.12.967e-1947.42| Late embryogenesis abundant 3 (LEA3) family prot... [more]
AT4G02380.21.769e-1345.95| senescence-associated gene 21 | Chr4:1046414-104... [more]
AT4G15910.17.633e-1038.61| drought-induced 21 | Chr4:9028657-9029269 FORWAR... [more]
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BLAST of rna-XM_014656989.2 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S3V2E7|A0A1S3V2E7_VIGRR1.000e-65100.00indole-3-acetic acid-induced protein ARG2 OS=Vigna... [more]
tr|A0A4D6MYN6|A0A4D6MYN6_VIGUN4.981e-5892.93Late embryogenesis abundant protein OS=Vigna ungui... [more]
tr|A0A0S3SSD4|A0A0S3SSD4_PHAAN2.426e-5391.09Uncharacterized protein OS=Vigna angularis var. an... [more]
tr|A0A0L9VHC2|A0A0L9VHC2_PHAAN2.426e-5391.09Uncharacterized protein OS=Phaseolus angularis OX=... [more]
tr|V7BH20|V7BH20_PHAVU1.246e-4887.00Uncharacterized protein OS=Phaseolus vulgaris OX=3... [more]
tr|C6T331|C6T331_SOYBN9.327e-4679.21Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|A0A0B2PM81|A0A0B2PM81_GLYSO9.327e-4679.21Indole-3-acetic acid-induced protein ARG2 OS=Glyci... [more]
tr|A0A371H3F3|A0A371H3F3_MUCPR4.392e-4577.00Indole-3-acetic acid-induced protein ARG2 OS=Mucun... [more]
tr|A0A445IH75|A0A445IH75_GLYSO4.998e-4276.47Indole-3-acetic acid-induced protein ARG2 OS=Glyci... [more]
tr|C6SZ33|C6SZ33_SOYBN4.998e-4276.47Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0
Date Performed: 2023-06-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004926Late embryogenesis abundant protein, LEA_3 subgroupPFAMPF03242LEA_3coord: 1..93
e-value: 6.1E-30
score: 103.8
IPR004926Late embryogenesis abundant protein, LEA_3 subgroupPANTHERPTHR33509LATE EMBRYOGENIS ABUNDANT PROTEIN 2-RELATEDcoord: 1..96

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-XM_014656989.2_VrVC1973A-SNU_v1 ID=rna-XM_014656989.2_VrVC1973A-SNU_v1; Name=rna-XM_014656989.2; organism=Vigna radiata; type=mRNA; length=300bp
ATGGCTCGCTCTTTCACTAACGTTAAGGTTCTCTCTGCTCTTGTCGCCCA
CGGATTCTCCAACACTGCCACCAGGCGTGGGTTTGCGGCGGCGGCGGCGG
CGACACAAAGCGCAACCAGAGGAGGTGCCTCCATCGGCGGCAATATGGTT
CCGAAATCAGGGGAAGAGAAGGTGAGAGGCGGTGAAAAGGTTTCGTGGGT
CCCAGACCCTGTGACTGGTTACTACAGACCAGAGAACACGAACGAGATTG
ATGTTGCTGACCTGCGAGCCACTGTTTTGGGCAAAAAATTCAACCAGTAA
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protein sequence of rna-XM_014656989.2_VrVC1973A-SNU_v1

>rna-XM_014656989.2_VrVC1973A-SNU_v1 ID=rna-XM_014656989.2_VrVC1973A-SNU_v1; Name=rna-XM_014656989.2_VrVC1973A-SNU_v1; organism=Vigna radiata; type=polypeptide; length=99bp
MARSFTNVKVLSALVAHGFSNTATRRGFAAAAAATQSATRGGASIGGNMV
PKSGEEKVRGGEKVSWVPDPVTGYYRPENTNEIDVADLRATVLGKKFNQ
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mRNA from alignment at chr08:28125721..28126629+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-XM_014656989.2_VrVC1973A-SNU_v1 ID=rna-XM_014656989.2_VrVC1973A-SNU_v1; Name=rna-XM_014656989.2; organism=Vigna radiata; type=mRNA; length=909bp; location=Sequence derived from: chr08:28125721..28126629+ (Vigna radiata
TCTCTCTGCCACTTCATAACAAAATAACTTGCCTTCAGGAACGTTCTAGA
CCACAGAGGTTTCTCTTGTCTTCTGTGGAGAGCttgttttcatttcttca
ttcGCATCCGAGGAACAAGCTTTCCGCAGTTCAACTCAATCACCCATGGC
TCGCTCTTTCACTAACGTTAAGGTTCTCTCTGCTCTTGTCGCCCACGGAT
TCTCCAACACTGCCACCAGGTACaccatttctttctctttcttctgtTTT
CAATAACTTCTTCTGCTATATTTCAAAAGCCGCAGTTCTTGGCTTTATTT
GTGGTGGGAGggaatttttttcctttattaccAAAGGGGGAATCTTGCTG
TAACGGGTGGTGAAATGAAGGATAAAGAATTGATAAAGTGGTGATTAACG
TTGATATGACTTTTTTGTGGGAACAGGCGTGGGTttgcggcggcggcggc
ggcgacACAAAGCGCAACCAGAGGAGGTGCCTCCATCGGCGGCAATATGG
TTCCGAAATCAGGGGAAGAGAAGGTGAGAGGCGGTGAAAAGGTTTCGTGG
GTCCCAGACCCTGTGACTGGTTACTACAGACCAGAGAACACGAACGAGAT
TGATGTTGCTGACCTGCGAGCCACTGTTTTGGGCAAAAAATTCAACCAGT
AATTTCAACTTGAAGACAGAACCTCTTTGGTTACTTATACGTTAGATGTA
TCTCGAAGTTCATAGAAGCTTCGGGGATTATTAACTATGAGGCAATCTTC
TGCATCAGTTGTTGTATTTCTCTCTACAGAATTAAGACTTTGTTAGCGCC
ATTGCATCTCCAGTTGAGAACTCCTAACTATGCTTTTGCTGTATTCTCTT
TGGAAAATAACAGAGTTCTTTGTAACTTTCTAAGCAAACCTCAATTCTTC
TTTGTCcaa
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Coding sequence (CDS) from alignment at chr08:28125721..28126629+

>rna-XM_014656989.2_VrVC1973A-SNU_v1 ID=rna-XM_014656989.2_VrVC1973A-SNU_v1; Name=rna-XM_014656989.2; organism=Vigna radiata; type=CDS; length=300bp; location=Sequence derived from: chr08:28125721..28126629+ (Vigna radiata
ATGGCTCGCTCTTTCACTAACGTTAAGGTTCTCTCTGCTCTTGTCGCCCA
CGGATTCTCCAACACTGCCACCAGGCGTGGGTttgcggcggcggcggcgg
cgacACAAAGCGCAACCAGAGGAGGTGCCTCCATCGGCGGCAATATGGTT
CCGAAATCAGGGGAAGAGAAGGTGAGAGGCGGTGAAAAGGTTTCGTGGGT
CCCAGACCCTGTGACTGGTTACTACAGACCAGAGAACACGAACGAGATTG
ATGTTGCTGACCTGCGAGCCACTGTTTTGGGCAAAAAATTCAACCAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR004926LEA_3a