rna-XM_014657190.2
Transcript Overview
References
External references for this mRNA
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of rna-XM_014657190.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q84J78|SSBP_ARATH (Single-stranded DNA-binding protein, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g11060 PE=2 SV=1) HSP 1 Score: 286.189 bits (731), Expect = 7.075e-98 Identity = 138/217 (63.59%), Postives = 174/217 (80.18%), Query Frame = 0 Query: 1 MNSVAVRLAKHLRVSTLTSSSLSSVSRSGTLWYSTSPSGGEDDQPSHVNGELKNEELDEEFEDLLGERPELELQGVDPKRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVGTGGMFDQR-IGAKDLPKPAQWHRVAVHNDMLGAYAVQKLFKNSSVYVEGDIETRVYNDSINGDVKSIPEICIRRDGRLRLIKSGESIDKTSLDELREGLF 216 MNS+A+R++K LR S+++ ++S+ R W+ST P +E ++E+FE+ + ERPEL+ GVDP++GWGFRGVH+AIICGKVGQAP+QKILRNG+ VTIFTVGTGGMFDQR +GA + PKPAQWHR+AVHN++LG+YAVQKL KNSSVYVEGDIETRVYNDSI+ +VKSIPEIC+RRDG++R+IK GESI K S DEL+EGL Sbjct: 1 MNSLAIRVSKVLRSSSISPLAISA-ERGSKSWFSTGPI---------------DEGVEEDFEENVTERPELQPHGVDPRKGWGFRGVHRAIICGKVGQAPLQKILRNGRTVTIFTVGTGGMFDQRLVGATNQPKPAQWHRIAVHNEVLGSYAVQKLAKNSSVYVEGDIETRVYNDSISSEVKSIPEICVRRDGKIRMIKYGESISKISFDELKEGLI 201
BLAST of rna-XM_014657190.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q89A53|SSB_BUCBP (Single-stranded DNA-binding protein OS=Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp) OX=224915 GN=ssb PE=3 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 5.781e-12 Identity = 38/118 (32.20%), Postives = 64/118 (54.24%), Query Frame = 0 Query: 85 RGVHKAIICGKVGQAPVQKILRNGKNVTIFTVGTGGMFDQRIGAKDLPKPAQWHRVAVHNDMLGAYAVQKLFKNSSVYVEGDIETRVYNDSINGDVKSIPEICIRRDGRLRLIKSGES 202 RG++K I+ G +GQ P + ++NG VT T+ T + + ++ + +WHR+ N L A + L K S VY+EG ++TR + D NG + I EI + G ++++ S S Sbjct: 4 RGINKVILIGYLGQDPDVRYMQNGSAVTNITLATSETWKDKNNG-EIKEKTEWHRIVFFNK-LAEIAGEYLKKGSQVYIEGSLQTRKWKDQ-NGIERYITEIIVSVGGTMQMLGSRNS 118
BLAST of rna-XM_014657190.2 vs. Araport11
Match: AT4G11060.1 (| mitochondrially targeted single-stranded DNA binding protein | Chr4:6754820-6756230 REVERSE LENGTH=201 | 201606) HSP 1 Score: 286.189 bits (731), Expect = 7.238e-99 Identity = 138/217 (63.59%), Postives = 174/217 (80.18%), Query Frame = 0 Query: 1 MNSVAVRLAKHLRVSTLTSSSLSSVSRSGTLWYSTSPSGGEDDQPSHVNGELKNEELDEEFEDLLGERPELELQGVDPKRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVGTGGMFDQR-IGAKDLPKPAQWHRVAVHNDMLGAYAVQKLFKNSSVYVEGDIETRVYNDSINGDVKSIPEICIRRDGRLRLIKSGESIDKTSLDELREGLF 216 MNS+A+R++K LR S+++ ++S+ R W+ST P +E ++E+FE+ + ERPEL+ GVDP++GWGFRGVH+AIICGKVGQAP+QKILRNG+ VTIFTVGTGGMFDQR +GA + PKPAQWHR+AVHN++LG+YAVQKL KNSSVYVEGDIETRVYNDSI+ +VKSIPEIC+RRDG++R+IK GESI K S DEL+EGL Sbjct: 1 MNSLAIRVSKVLRSSSISPLAISA-ERGSKSWFSTGPI---------------DEGVEEDFEENVTERPELQPHGVDPRKGWGFRGVHRAIICGKVGQAPLQKILRNGRTVTIFTVGTGGMFDQRLVGATNQPKPAQWHRIAVHNEVLGSYAVQKLAKNSSVYVEGDIETRVYNDSISSEVKSIPEICVRRDGKIRMIKYGESISKISFDELKEGLI 201
BLAST of rna-XM_014657190.2 vs. Araport11
Match: AT3G18580.1 (| Nucleic acid-binding%2C OB-fold-like protein | Chr3:6396940-6398068 REVERSE LENGTH=217 | 201606) HSP 1 Score: 102.064 bits (253), Expect = 1.224e-26 Identity = 75/222 (33.78%), Postives = 123/222 (55.41%), Query Frame = 0 Query: 2 NSVAVRLAKHLRVSTLTSSSLSSVSRSGTLWYSTSPSGGE-DDQPSHVNGELKNEELDEEF---EDLLGERPELELQGVDPKRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVGTGGMFDQRIG-AKDLPK------PAQWHRVAVHNDMLGAYAVQKLFKNSSVYVEGDIETRVYNDSINGDVKSIPEICIRRDGRLRLIKSGESIDKTSLDELR 212 NS+A L++ L S L++ +S S S TSP + D+ S + E K + F E ++ ERP LE G+D G+ KAI+ G+VGQ P+QK L++G+ VT+F+VGTGG+ + R + P+ QWHRV+V+ + L ++ + + +Y+EG++ET+++ D + G V+ I E+ IRR+GR+ + + + S ELR Sbjct: 3 NSMAT-LSRRLYRSLLSNPRISQASMSFCTNNITSPEDSDFDELESPI--EPKASDPVSRFSGEERVMEERP-LE-NGLD-------SGIFKAILVGQVGQLPLQKKLKSGRTVTLFSVGTGGIRNNRRPLINEDPREYASRSAVQWHRVSVYPERLADLVLKNVEPGTVIYLEGNLETKIFTDPVTGLVRRIREVAIRRNGRVVFLGKAGDMQQPSSAELR 212
BLAST of rna-XM_014657190.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3V2V1|A0A1S3V2V1_VIGRR (single-stranded DNA-binding protein, mitochondrial OS=Vigna radiata var. radiata OX=3916 GN=LOC106771242 PE=4 SV=1) HSP 1 Score: 444.121 bits (1141), Expect = 1.401e-157 Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0 Query: 1 MNSVAVRLAKHLRVSTLTSSSLSSVSRSGTLWYSTSPSGGEDDQPSHVNGELKNEELDEEFEDLLGERPELELQGVDPKRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVGTGGMFDQRIGAKDLPKPAQWHRVAVHNDMLGAYAVQKLFKNSSVYVEGDIETRVYNDSINGDVKSIPEICIRRDGRLRLIKSGESIDKTSLDELREGLF 216 MNSVAVRLAKHLRVSTLTSSSLSSVSRSGTLWYSTSPSGGEDDQPSHVNGELKNEELDEEFEDLLGERPELELQGVDPKRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVGTGGMFDQRIGAKDLPKPAQWHRVAVHNDMLGAYAVQKLFKNSSVYVEGDIETRVYNDSINGDVKSIPEICIRRDGRLRLIKSGESIDKTSLDELREGLF Sbjct: 1 MNSVAVRLAKHLRVSTLTSSSLSSVSRSGTLWYSTSPSGGEDDQPSHVNGELKNEELDEEFEDLLGERPELELQGVDPKRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVGTGGMFDQRIGAKDLPKPAQWHRVAVHNDMLGAYAVQKLFKNSSVYVEGDIETRVYNDSINGDVKSIPEICIRRDGRLRLIKSGESIDKTSLDELREGLF 216
BLAST of rna-XM_014657190.2 vs. UniProtKB/TrEMBL
Match: tr|V7BK76|V7BK76_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_007G199200g PE=4 SV=1) HSP 1 Score: 406.371 bits (1043), Expect = 1.162e-142 Identity = 196/216 (90.74%), Postives = 204/216 (94.44%), Query Frame = 0 Query: 1 MNSVAVRLAKHLRVSTLTSSSLSSVSRSGTLWYSTSPSGGEDDQPSHVNGELKNEELDEEFEDLLGERPELELQGVDPKRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVGTGGMFDQRIGAKDLPKPAQWHRVAVHNDMLGAYAVQKLFKNSSVYVEGDIETRVYNDSINGDVKSIPEICIRRDGRLRLIKSGESIDKTSLDELREGLF 216 MNSVAVRLAKHLRVS LTSSSL VSRSGTLWYSTSPSGG DD PSH NGE KNEELDE F+D LG RPEL+LQGVDPKRGWGFRGVHKAIICGKVGQ+PVQKILRNGKNVTIFTVGTGGMFDQRIG KDLPKPAQWHR+AVHNDMLGAYAVQKLFKN SVY+EGDIETRVYNDSING+VKSIPEIC+RRDGR+RLIKSGESIDKTSLDELREGLF Sbjct: 1 MNSVAVRLAKHLRVSALTSSSLGGVSRSGTLWYSTSPSGGVDDLPSHHNGEPKNEELDEGFDDFLGGRPELQLQGVDPKRGWGFRGVHKAIICGKVGQSPVQKILRNGKNVTIFTVGTGGMFDQRIGPKDLPKPAQWHRIAVHNDMLGAYAVQKLFKNCSVYIEGDIETRVYNDSINGEVKSIPEICVRRDGRIRLIKSGESIDKTSLDELREGLF 216
BLAST of rna-XM_014657190.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3SQN3|A0A0S3SQN3_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.08G176300 PE=4 SV=1) HSP 1 Score: 397.897 bits (1021), Expect = 2.652e-139 Identity = 204/216 (94.44%), Postives = 212/216 (98.15%), Query Frame = 0 Query: 1 MNSVAVRLAKHLRVSTLTSSSLSSVSRSGTLWYSTSPSGGEDDQPSHVNGELKNEELDEEFEDLLGERPELELQGVDPKRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVGTGGMFDQRIGAKDLPKPAQWHRVAVHNDMLGAYAVQKLFKNSSVYVEGDIETRVYNDSINGDVKSIPEICIRRDGRLRLIKSGESIDKTSLDELREGLF 216 MNSVAVRLAKHLRVSTLTSSSL SVSRSGTLWYSTSPSGGEDDQPSHVNGE KNEELDE F+DLLG RPELELQGVDPKRGWGFRGVHKAIICGKVGQAPVQKILRNG+NVTIFTVGTGG+FDQRIG+KDLPKPAQWHR+AVHNDMLGAYAVQKLFKNSSVY+EGDIETRVYNDSINGDVKSIPEIC+RRDGR+RLIKSGESIDKTSLDELREGLF Sbjct: 1 MNSVAVRLAKHLRVSTLTSSSLGSVSRSGTLWYSTSPSGGEDDQPSHVNGEPKNEELDEGFDDLLGGRPELELQGVDPKRGWGFRGVHKAIICGKVGQAPVQKILRNGRNVTIFTVGTGGLFDQRIGSKDLPKPAQWHRIAVHNDMLGAYAVQKLFKNSSVYIEGDIETRVYNDSINGDVKSIPEICVRRDGRIRLIKSGESIDKTSLDELREGLF 216
BLAST of rna-XM_014657190.2 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6N2X7|A0A4D6N2X7_VIGUN (Single-strand DNA-binding protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG9g2310 PE=4 SV=1) HSP 1 Score: 387.111 bits (993), Expect = 2.203e-134 Identity = 193/212 (91.04%), Postives = 204/212 (96.23%), Query Frame = 0 Query: 1 MNSVAVRLAKHLRVSTLTSSSLSSVSRSGTLWYSTSPSGGEDDQPSHVNGELKNEELDEEFEDLLGERPELELQGVDPKRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVGTGGMFDQRIGAKDLPKPAQWHRVAVHNDMLGAYAVQKLFKNSSVYVEGDIETRVYNDSINGDVKSIPEICIRRDGRLRLIKSGESIDKTSLDELR 212 MNSVAVRLAKHLRVS+LTSSSL V+RSGTLWYSTSPSGGEDDQPSH NGE KNEELDE F++LL RPEL+LQGVDPKRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVGTGGMFDQRIG KDLPKPAQWHR+AVHNDMLGAY+VQKLFKNSSVY+EGDIETRVYNDSING+VKSIPEIC+RRDGR+RLIKSGESIDKTSLDELR Sbjct: 6 MNSVAVRLAKHLRVSSLTSSSLGGVTRSGTLWYSTSPSGGEDDQPSHDNGEPKNEELDEGFDELLDGRPELQLQGVDPKRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVGTGGMFDQRIGPKDLPKPAQWHRIAVHNDMLGAYSVQKLFKNSSVYIEGDIETRVYNDSINGEVKSIPEICVRRDGRIRLIKSGESIDKTSLDELR 217
BLAST of rna-XM_014657190.2 vs. UniProtKB/TrEMBL
Match: tr|A0A371FSM2|A0A371FSM2_MUCPR (Single-stranded DNA-binding protein, mitochondrial OS=Mucuna pruriens OX=157652 GN=CR513_38064 PE=4 SV=1) HSP 1 Score: 380.563 bits (976), Expect = 2.245e-132 Identity = 186/212 (87.74%), Postives = 196/212 (92.45%), Query Frame = 0 Query: 1 MNSVAVRLAKHLRVSTLTSSSLSSVSRSGTLWYSTSPSGGEDDQPSHVNGELKNEELDEEFEDLLGERPELELQGVDPKRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVGTGGMFDQRI-GAKDLPKPAQWHRVAVHNDMLGAYAVQKLFKNSSVYVEGDIETRVYNDSINGDVKSIPEICIRRDGRLRLIKSGESIDKTSLDEL 211 MNSVAVRLAKHLRVS L SSSL V RSGTLWYSTS SGG DDQPSH N KNEELDEEF+D LG +PEL+LQGVDP+RGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVGTGGMFDQRI G KDLPKPAQWHR+AVHND+LG YAVQ+LFKNSSVYVEGDIETRVYNDSING+VKSIPEIC+RRDGR+RLIKSGESIDKTSLDEL Sbjct: 1 MNSVAVRLAKHLRVSALASSSLGGVPRSGTLWYSTSLSGGGDDQPSHDNDGPKNEELDEEFDDFLGGKPELQLQGVDPQRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVGTGGMFDQRIVGPKDLPKPAQWHRIAVHNDILGTYAVQQLFKNSSVYVEGDIETRVYNDSINGEVKSIPEICVRRDGRIRLIKSGESIDKTSLDEL 212
BLAST of rna-XM_014657190.2 vs. UniProtKB/TrEMBL
Match: tr|I1LB73|I1LB73_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100792996 PE=4 SV=1) HSP 1 Score: 372.859 bits (956), Expect = 1.923e-129 Identity = 180/217 (82.95%), Postives = 196/217 (90.32%), Query Frame = 0 Query: 1 MNSVAVRLAKHLRVSTLTSSSLSSVSRSGTLWYSTSPSGGEDDQPSHVNGELKNEELDEEFEDLLGERPELELQGVDPKRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVGTGGMFDQRI-GAKDLPKPAQWHRVAVHNDMLGAYAVQKLFKNSSVYVEGDIETRVYNDSINGDVKSIPEICIRRDGRLRLIKSGESIDKTSLDELREGLF 216 MNS+AVRLAKHLR+S LTS SL V RSG WYSTS SGGE+D P N K E LDEEF+D LGE+PEL+LQGVDPK+GWGFRGVHKAIICGKVGQAPVQKILRNG+N+TIFTVGTGGMFDQRI G KDLPKPAQWHR+AVHND+LG YAVQ+LFKNSSVYVEGDIETRVYNDSING+VKSIPEIC+RRDGR+RLIK+GESIDKTSLDELREGLF Sbjct: 1 MNSMAVRLAKHLRLSALTSFSLGGVPRSGASWYSTSLSGGENDHPLPDNDAPKKEALDEEFDDFLGEKPELQLQGVDPKKGWGFRGVHKAIICGKVGQAPVQKILRNGRNITIFTVGTGGMFDQRIQGPKDLPKPAQWHRIAVHNDILGTYAVQQLFKNSSVYVEGDIETRVYNDSINGNVKSIPEICVRRDGRIRLIKNGESIDKTSLDELREGLF 217
BLAST of rna-XM_014657190.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445IMP1|A0A445IMP1_GLYSO (Single-stranded DNA-binding protein, mitochondrial OS=Glycine soja OX=3848 GN=D0Y65_027122 PE=4 SV=1) HSP 1 Score: 358.607 bits (919), Expect = 2.675e-123 Identity = 180/246 (73.17%), Postives = 196/246 (79.67%), Query Frame = 0 Query: 1 MNSVAVRLAKHLRVSTLTSSSLSSVSRSGTLWYSTSPSGGEDDQPSHVNGELKNEELDEEFEDLLGERPELELQGVDPKRGWGFRGVHK-----------------------------AIICGKVGQAPVQKILRNGKNVTIFTVGTGGMFDQRI-GAKDLPKPAQWHRVAVHNDMLGAYAVQKLFKNSSVYVEGDIETRVYNDSINGDVKSIPEICIRRDGRLRLIKSGESIDKTSLDELREGLF 216 MNS+AVRLAKHLR+S LTS SL V RSG WYSTS SGGE+D P N K E LDEEF+D LGE+PEL+LQGVDPK+GWGFRGVHK AIICGKVGQAPVQKILRNG+N+TIFTVGTGGMFDQRI G KDLPKPAQWHR+AVHND+LG YAVQ+LFKNSSVYVEGDIETRVYNDSING+VKSIPEIC+RRDGR+RLIK+GESIDKTSLDELREGLF Sbjct: 1 MNSMAVRLAKHLRLSALTSFSLGGVPRSGASWYSTSLSGGENDHPLPDNDAPKKEALDEEFDDFLGEKPELQLQGVDPKKGWGFRGVHKFLTGFNLVGNRRRKSRDAMRFRDASLSKQAIICGKVGQAPVQKILRNGRNITIFTVGTGGMFDQRIQGPKDLPKPAQWHRIAVHNDILGTYAVQQLFKNSSVYVEGDIETRVYNDSINGNVKSIPEICVRRDGRIRLIKNGESIDKTSLDELREGLF 246
BLAST of rna-XM_014657190.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445F9N5|A0A445F9N5_GLYSO (Single-stranded DNA-binding protein, mitochondrial isoform A OS=Glycine soja OX=3848 GN=D0Y65_055020 PE=4 SV=1) HSP 1 Score: 355.525 bits (911), Expect = 1.222e-122 Identity = 176/217 (81.11%), Postives = 191/217 (88.02%), Query Frame = 0 Query: 1 MNSVAVRLAKHLRVSTLTSSSLSSVSRSGTLWYSTSPSGGEDDQPSHVNGELKNEELDEEFEDLLGERPELELQGVDPKRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVGTGGMFDQRI-GAKDLPKPAQWHRVAVHNDMLGAYAVQKLFKNSSVYVEGDIETRVYNDSINGDVKSIPEICIRRDGRLRLIKSGESIDKTSLDELREGLF 216 MNS+AVRL KHL++S TSSS V RSG WYSTS SGGE QPS N KNE LD E +D LGE+ EL+LQGVDPK+GWGFRGVHKAIICGKVGQAPVQKILRNG+N+TIFTVGTGGMFDQRI G KDLPKPAQWHR+AVHND+LGAYAVQKLFKNSSVYVEGDIE RVYNDSING+VKSIPEIC+RRDG++ LIKSGESIDKTSLDELREGLF Sbjct: 1 MNSMAVRLVKHLQLSAPTSSSFGGVPRSGASWYSTSLSGGEY-QPSQDNVAPKNEALDGELDDFLGEKAELQLQGVDPKKGWGFRGVHKAIICGKVGQAPVQKILRNGRNLTIFTVGTGGMFDQRIQGPKDLPKPAQWHRIAVHNDILGAYAVQKLFKNSSVYVEGDIEIRVYNDSINGEVKSIPEICVRRDGKICLIKSGESIDKTSLDELREGLF 216
BLAST of rna-XM_014657190.2 vs. UniProtKB/TrEMBL
Match: tr|I1NJ41|I1NJ41_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100306124 PE=4 SV=1) HSP 1 Score: 355.525 bits (911), Expect = 1.222e-122 Identity = 176/217 (81.11%), Postives = 191/217 (88.02%), Query Frame = 0 Query: 1 MNSVAVRLAKHLRVSTLTSSSLSSVSRSGTLWYSTSPSGGEDDQPSHVNGELKNEELDEEFEDLLGERPELELQGVDPKRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVGTGGMFDQRI-GAKDLPKPAQWHRVAVHNDMLGAYAVQKLFKNSSVYVEGDIETRVYNDSINGDVKSIPEICIRRDGRLRLIKSGESIDKTSLDELREGLF 216 MNS+AVRL KHL++S TSSS V RSG WYSTS SGGE QPS N KNE LD E +D LGE+ EL+LQGVDPK+GWGFRGVHKAIICGKVGQAPVQKILRNG+N+TIFTVGTGGMFDQRI G KDLPKPAQWHR+AVHND+LGAYAVQKLFKNSSVYVEGDIE RVYNDSING+VKSIPEIC+RRDG++ LIKSGESIDKTSLDELREGLF Sbjct: 1 MNSMAVRLVKHLQLSAPTSSSFGGVPRSGASWYSTSLSGGEY-QPSQDNVAPKNEALDGELDDFLGEKAELQLQGVDPKKGWGFRGVHKAIICGKVGQAPVQKILRNGRNLTIFTVGTGGMFDQRIQGPKDLPKPAQWHRIAVHNDILGAYAVQKLFKNSSVYVEGDIEIRVYNDSINGEVKSIPEICVRRDGKICLIKSGESIDKTSLDELREGLF 216
BLAST of rna-XM_014657190.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9TYC0|A0A0L9TYC0_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan02g163600 PE=4 SV=1) HSP 1 Score: 354.369 bits (908), Expect = 5.224e-122 Identity = 181/192 (94.27%), Postives = 188/192 (97.92%), Query Frame = 0 Query: 1 MNSVAVRLAKHLRVSTLTSSSLSSVSRSGTLWYSTSPSGGEDDQPSHVNGELKNEELDEEFEDLLGERPELELQGVDPKRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVGTGGMFDQRIGAKDLPKPAQWHRVAVHNDMLGAYAVQKLFKNSSVYVEGDIETRVYNDSINGDVKSIPEICIRRDG 192 MNSVAVRLAKHLRVSTLTSSSL SVSRSGTLWYSTSPSGGEDDQPSHVNGE KNEELDE F+DLLG RPELELQGVDPKRGWGFRGVHKAIICGKVGQAPVQKILRNG+NVTIFTVGTGG+FDQRIG+KDLPKPAQWHR+AVHNDMLGAYAVQKLFKNSSVY+EGDIETRVYNDSINGDVKSIPEIC+RRDG Sbjct: 1 MNSVAVRLAKHLRVSTLTSSSLGSVSRSGTLWYSTSPSGGEDDQPSHVNGEPKNEELDEGFDDLLGGRPELELQGVDPKRGWGFRGVHKAIICGKVGQAPVQKILRNGRNVTIFTVGTGGLFDQRIGSKDLPKPAQWHRIAVHNDMLGAYAVQKLFKNSSVYIEGDIETRVYNDSINGDVKSIPEICVRRDG 192 The following BLAST results are available for this feature:
BLAST of rna-XM_014657190.2 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot) Total hits: 2
BLAST of rna-XM_014657190.2 vs. Araport11
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11) Total hits: 2
BLAST of rna-XM_014657190.2 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0
Date Performed: 2023-06-20
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-XM_014657190.2_VrVC1973A-SNU_v1 ID=rna-XM_014657190.2_VrVC1973A-SNU_v1; Name=rna-XM_014657190.2; organism=Vigna radiata; type=mRNA; length=651bpback to top protein sequence of rna-XM_014657190.2_VrVC1973A-SNU_v1 >rna-XM_014657190.2_VrVC1973A-SNU_v1 ID=rna-XM_014657190.2_VrVC1973A-SNU_v1; Name=rna-XM_014657190.2_VrVC1973A-SNU_v1; organism=Vigna radiata; type=polypeptide; length=216bpback to top mRNA from alignment at chr08:31629566..31632370- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>rna-XM_014657190.2_VrVC1973A-SNU_v1 ID=rna-XM_014657190.2_VrVC1973A-SNU_v1; Name=rna-XM_014657190.2; organism=Vigna radiata; type=mRNA; length=2805bp; location=Sequence derived from: chr08:31629566..31632370- (Vigna radiataback to top Coding sequence (CDS) from alignment at chr08:31629566..31632370- >rna-XM_014657190.2_VrVC1973A-SNU_v1 ID=rna-XM_014657190.2_VrVC1973A-SNU_v1; Name=rna-XM_014657190.2; organism=Vigna radiata; type=CDS; length=651bp; location=Sequence derived from: chr08:31629566..31632370- (Vigna radiataback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|