rna-XM_014657190.2

Transcript Overview
Namerna-XM_014657190.2
Unique Namerna-XM_014657190.2_VrVC1973A-SNU_v1
TypemRNA
OrganismVigna radiata (Mung bean, green gram)
Sequence length651
Productsingle-stranded DNA-binding protein, mitochondrial
References
External references for this mRNA
DatabaseAccession
GeneID106771242
GenbankXM_014657190.2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr08chromosomechr08:31629566..31632370 -Vigna radiata cv. VC1973A genome v6.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
asvrvL358Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anvrvL0430Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL0436Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvrvL452Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvrvL461Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anvrvL0617Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL0655Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL0812Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL0815Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL1112Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
caivrvL287Cicer arietinum ICC 4958 genome v2Cicer arietinum
caivrvL437Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavrvL084Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavrvL231Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavrvL361Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvrvL0655Cajanus cajan Asha genome v1.0Cajanus cajan
ccvrvL0817Cajanus cajan Asha genome v1.0Cajanus cajan
crvrvL276Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crvrvL403Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
psvrvL235Pisum sativum Cameor genome v1aPisum sativum
psvrvL561Pisum sativum Cameor genome v1aPisum sativum
pvvrvL594Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvrvL794Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
tifvrvL411Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvrvL601Vicia faba cv. Tiffany genome v1.0Vicia faba
vrvvrvL195Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvrvL425Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvrvL608Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvssR746Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvssR782Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvssR794Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvssR808Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvssR830Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvzwsR637Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvzwsR646Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvvuaR539Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvzwsR681Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvvuR578Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vrvvuaR589Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvvuR621Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canvrvL211Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvrvL335Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvrvL300Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvrvL396Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvrvL405Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvrvL492Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvrvL081Cicer arietinum
carvrvL216Cicer arietinum
carvrvL331Cicer arietinum
ccavrvL236Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavrvL363Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavrvL676Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vrvvumR616Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvumR626Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvumR668Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvumR687Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvvaR719Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvvaR794Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvstR621Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vrvvstR636Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vrvvstR644Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vrvvstR660Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vrvvstR680Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvrvL269Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvrvL402Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvrvL415Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvrvL589Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvrvL068Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvrvL555Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvrvL742Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vrvvunR543Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vrvvunR581Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Ca_03646Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
XM_058887164.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vigst.08G137200.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vigan.08G176300.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vfaba.Hedin2.R1.3g089320.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vum_08G01407.1Vigna umbellata FF25 genome v1.0Vigna umbellata
LR48_mrnaVigan02g163600Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vfaba.Tiffany.R1.3g073280.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Cc_v2.0_03904.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vigun07g142200.2Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vigun07g142200.2Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-KK1_007054Cajanus cajan Asha genome v1.0Cajanus cajan
jg3297.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Va02G051710.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-XM_004495625.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Psat06G0410500-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
rna-TanjilR_17609Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Phvul.007G199200.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
evm.model.Chr07.1388.1.62113177Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LOC106771242gene-LOC106771242_VrVC1973A-SNU_v1Vigna radiatagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_014657190.2-6exon-XM_014657190.2-6_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_014657190.2-5exon-XM_014657190.2-5_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_014657190.2-4exon-XM_014657190.2-4_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_014657190.2-3exon-XM_014657190.2-3_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_014657190.2-2exon-XM_014657190.2-2_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_014657190.2-1exon-XM_014657190.2-1_VrVC1973A-SNU_v1Vigna radiataexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-XP_014512676.1cds-XP_014512676.1_VrVC1973A-SNU_v1_6Vigna radiataCDS
cds-XP_014512676.1cds-XP_014512676.1_VrVC1973A-SNU_v1_5Vigna radiataCDS
cds-XP_014512676.1cds-XP_014512676.1_VrVC1973A-SNU_v1_4Vigna radiataCDS
cds-XP_014512676.1cds-XP_014512676.1_VrVC1973A-SNU_v1_3Vigna radiataCDS
cds-XP_014512676.1cds-XP_014512676.1_VrVC1973A-SNU_v1_2Vigna radiataCDS
cds-XP_014512676.1cds-XP_014512676.1_VrVC1973A-SNU_v1Vigna radiataCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-XM_014657190.2_VrVC1973A-SNU_v1rna-XM_014657190.2_VrVC1973A-SNU_v1Vigna radiatapolypeptide
rna-XM_014657190.2_VrVC1973A-SNU_v1rna-XM_014657190.2_VrVC1973A-SNU_v1-proteinVigna radiatapolypeptide


Homology
BLAST of rna-XM_014657190.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q84J78|SSBP_ARATH (Single-stranded DNA-binding protein, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g11060 PE=2 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 7.075e-98
Identity = 138/217 (63.59%), Postives = 174/217 (80.18%), Query Frame = 0
Query:    1 MNSVAVRLAKHLRVSTLTSSSLSSVSRSGTLWYSTSPSGGEDDQPSHVNGELKNEELDEEFEDLLGERPELELQGVDPKRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVGTGGMFDQR-IGAKDLPKPAQWHRVAVHNDMLGAYAVQKLFKNSSVYVEGDIETRVYNDSINGDVKSIPEICIRRDGRLRLIKSGESIDKTSLDELREGLF 216
            MNS+A+R++K LR S+++  ++S+  R    W+ST P                +E ++E+FE+ + ERPEL+  GVDP++GWGFRGVH+AIICGKVGQAP+QKILRNG+ VTIFTVGTGGMFDQR +GA + PKPAQWHR+AVHN++LG+YAVQKL KNSSVYVEGDIETRVYNDSI+ +VKSIPEIC+RRDG++R+IK GESI K S DEL+EGL 
Sbjct:    1 MNSLAIRVSKVLRSSSISPLAISA-ERGSKSWFSTGPI---------------DEGVEEDFEENVTERPELQPHGVDPRKGWGFRGVHRAIICGKVGQAPLQKILRNGRTVTIFTVGTGGMFDQRLVGATNQPKPAQWHRIAVHNEVLGSYAVQKLAKNSSVYVEGDIETRVYNDSISSEVKSIPEICVRRDGKIRMIKYGESISKISFDELKEGLI 201          
BLAST of rna-XM_014657190.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q89A53|SSB_BUCBP (Single-stranded DNA-binding protein OS=Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp) OX=224915 GN=ssb PE=3 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 5.781e-12
Identity = 38/118 (32.20%), Postives = 64/118 (54.24%), Query Frame = 0
Query:   85 RGVHKAIICGKVGQAPVQKILRNGKNVTIFTVGTGGMFDQRIGAKDLPKPAQWHRVAVHNDMLGAYAVQKLFKNSSVYVEGDIETRVYNDSINGDVKSIPEICIRRDGRLRLIKSGES 202
            RG++K I+ G +GQ P  + ++NG  VT  T+ T   +  +    ++ +  +WHR+   N  L   A + L K S VY+EG ++TR + D  NG  + I EI +   G ++++ S  S
Sbjct:    4 RGINKVILIGYLGQDPDVRYMQNGSAVTNITLATSETWKDKNNG-EIKEKTEWHRIVFFNK-LAEIAGEYLKKGSQVYIEGSLQTRKWKDQ-NGIERYITEIIVSVGGTMQMLGSRNS 118          
BLAST of rna-XM_014657190.2 vs. Araport11
Match: AT4G11060.1 (| mitochondrially targeted single-stranded DNA binding protein | Chr4:6754820-6756230 REVERSE LENGTH=201 | 201606)

HSP 1 Score: 286.189 bits (731), Expect = 7.238e-99
Identity = 138/217 (63.59%), Postives = 174/217 (80.18%), Query Frame = 0
Query:    1 MNSVAVRLAKHLRVSTLTSSSLSSVSRSGTLWYSTSPSGGEDDQPSHVNGELKNEELDEEFEDLLGERPELELQGVDPKRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVGTGGMFDQR-IGAKDLPKPAQWHRVAVHNDMLGAYAVQKLFKNSSVYVEGDIETRVYNDSINGDVKSIPEICIRRDGRLRLIKSGESIDKTSLDELREGLF 216
            MNS+A+R++K LR S+++  ++S+  R    W+ST P                +E ++E+FE+ + ERPEL+  GVDP++GWGFRGVH+AIICGKVGQAP+QKILRNG+ VTIFTVGTGGMFDQR +GA + PKPAQWHR+AVHN++LG+YAVQKL KNSSVYVEGDIETRVYNDSI+ +VKSIPEIC+RRDG++R+IK GESI K S DEL+EGL 
Sbjct:    1 MNSLAIRVSKVLRSSSISPLAISA-ERGSKSWFSTGPI---------------DEGVEEDFEENVTERPELQPHGVDPRKGWGFRGVHRAIICGKVGQAPLQKILRNGRTVTIFTVGTGGMFDQRLVGATNQPKPAQWHRIAVHNEVLGSYAVQKLAKNSSVYVEGDIETRVYNDSISSEVKSIPEICVRRDGKIRMIKYGESISKISFDELKEGLI 201          
BLAST of rna-XM_014657190.2 vs. Araport11
Match: AT3G18580.1 (| Nucleic acid-binding%2C OB-fold-like protein | Chr3:6396940-6398068 REVERSE LENGTH=217 | 201606)

HSP 1 Score: 102.064 bits (253), Expect = 1.224e-26
Identity = 75/222 (33.78%), Postives = 123/222 (55.41%), Query Frame = 0
Query:    2 NSVAVRLAKHLRVSTLTSSSLSSVSRSGTLWYSTSPSGGE-DDQPSHVNGELKNEELDEEF---EDLLGERPELELQGVDPKRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVGTGGMFDQRIG-AKDLPK------PAQWHRVAVHNDMLGAYAVQKLFKNSSVYVEGDIETRVYNDSINGDVKSIPEICIRRDGRLRLIKSGESIDKTSLDELR 212
            NS+A  L++ L  S L++  +S  S S      TSP   + D+  S +  E K  +    F   E ++ ERP LE  G+D        G+ KAI+ G+VGQ P+QK L++G+ VT+F+VGTGG+ + R     + P+        QWHRV+V+ + L    ++ +   + +Y+EG++ET+++ D + G V+ I E+ IRR+GR+  +     + + S  ELR
Sbjct:    3 NSMAT-LSRRLYRSLLSNPRISQASMSFCTNNITSPEDSDFDELESPI--EPKASDPVSRFSGEERVMEERP-LE-NGLD-------SGIFKAILVGQVGQLPLQKKLKSGRTVTLFSVGTGGIRNNRRPLINEDPREYASRSAVQWHRVSVYPERLADLVLKNVEPGTVIYLEGNLETKIFTDPVTGLVRRIREVAIRRNGRVVFLGKAGDMQQPSSAELR 212          
BLAST of rna-XM_014657190.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3V2V1|A0A1S3V2V1_VIGRR (single-stranded DNA-binding protein, mitochondrial OS=Vigna radiata var. radiata OX=3916 GN=LOC106771242 PE=4 SV=1)

HSP 1 Score: 444.121 bits (1141), Expect = 1.401e-157
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0
Query:    1 MNSVAVRLAKHLRVSTLTSSSLSSVSRSGTLWYSTSPSGGEDDQPSHVNGELKNEELDEEFEDLLGERPELELQGVDPKRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVGTGGMFDQRIGAKDLPKPAQWHRVAVHNDMLGAYAVQKLFKNSSVYVEGDIETRVYNDSINGDVKSIPEICIRRDGRLRLIKSGESIDKTSLDELREGLF 216
            MNSVAVRLAKHLRVSTLTSSSLSSVSRSGTLWYSTSPSGGEDDQPSHVNGELKNEELDEEFEDLLGERPELELQGVDPKRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVGTGGMFDQRIGAKDLPKPAQWHRVAVHNDMLGAYAVQKLFKNSSVYVEGDIETRVYNDSINGDVKSIPEICIRRDGRLRLIKSGESIDKTSLDELREGLF
Sbjct:    1 MNSVAVRLAKHLRVSTLTSSSLSSVSRSGTLWYSTSPSGGEDDQPSHVNGELKNEELDEEFEDLLGERPELELQGVDPKRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVGTGGMFDQRIGAKDLPKPAQWHRVAVHNDMLGAYAVQKLFKNSSVYVEGDIETRVYNDSINGDVKSIPEICIRRDGRLRLIKSGESIDKTSLDELREGLF 216          
BLAST of rna-XM_014657190.2 vs. UniProtKB/TrEMBL
Match: tr|V7BK76|V7BK76_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_007G199200g PE=4 SV=1)

HSP 1 Score: 406.371 bits (1043), Expect = 1.162e-142
Identity = 196/216 (90.74%), Postives = 204/216 (94.44%), Query Frame = 0
Query:    1 MNSVAVRLAKHLRVSTLTSSSLSSVSRSGTLWYSTSPSGGEDDQPSHVNGELKNEELDEEFEDLLGERPELELQGVDPKRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVGTGGMFDQRIGAKDLPKPAQWHRVAVHNDMLGAYAVQKLFKNSSVYVEGDIETRVYNDSINGDVKSIPEICIRRDGRLRLIKSGESIDKTSLDELREGLF 216
            MNSVAVRLAKHLRVS LTSSSL  VSRSGTLWYSTSPSGG DD PSH NGE KNEELDE F+D LG RPEL+LQGVDPKRGWGFRGVHKAIICGKVGQ+PVQKILRNGKNVTIFTVGTGGMFDQRIG KDLPKPAQWHR+AVHNDMLGAYAVQKLFKN SVY+EGDIETRVYNDSING+VKSIPEIC+RRDGR+RLIKSGESIDKTSLDELREGLF
Sbjct:    1 MNSVAVRLAKHLRVSALTSSSLGGVSRSGTLWYSTSPSGGVDDLPSHHNGEPKNEELDEGFDDFLGGRPELQLQGVDPKRGWGFRGVHKAIICGKVGQSPVQKILRNGKNVTIFTVGTGGMFDQRIGPKDLPKPAQWHRIAVHNDMLGAYAVQKLFKNCSVYIEGDIETRVYNDSINGEVKSIPEICVRRDGRIRLIKSGESIDKTSLDELREGLF 216          
BLAST of rna-XM_014657190.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3SQN3|A0A0S3SQN3_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.08G176300 PE=4 SV=1)

HSP 1 Score: 397.897 bits (1021), Expect = 2.652e-139
Identity = 204/216 (94.44%), Postives = 212/216 (98.15%), Query Frame = 0
Query:    1 MNSVAVRLAKHLRVSTLTSSSLSSVSRSGTLWYSTSPSGGEDDQPSHVNGELKNEELDEEFEDLLGERPELELQGVDPKRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVGTGGMFDQRIGAKDLPKPAQWHRVAVHNDMLGAYAVQKLFKNSSVYVEGDIETRVYNDSINGDVKSIPEICIRRDGRLRLIKSGESIDKTSLDELREGLF 216
            MNSVAVRLAKHLRVSTLTSSSL SVSRSGTLWYSTSPSGGEDDQPSHVNGE KNEELDE F+DLLG RPELELQGVDPKRGWGFRGVHKAIICGKVGQAPVQKILRNG+NVTIFTVGTGG+FDQRIG+KDLPKPAQWHR+AVHNDMLGAYAVQKLFKNSSVY+EGDIETRVYNDSINGDVKSIPEIC+RRDGR+RLIKSGESIDKTSLDELREGLF
Sbjct:    1 MNSVAVRLAKHLRVSTLTSSSLGSVSRSGTLWYSTSPSGGEDDQPSHVNGEPKNEELDEGFDDLLGGRPELELQGVDPKRGWGFRGVHKAIICGKVGQAPVQKILRNGRNVTIFTVGTGGLFDQRIGSKDLPKPAQWHRIAVHNDMLGAYAVQKLFKNSSVYIEGDIETRVYNDSINGDVKSIPEICVRRDGRIRLIKSGESIDKTSLDELREGLF 216          
BLAST of rna-XM_014657190.2 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6N2X7|A0A4D6N2X7_VIGUN (Single-strand DNA-binding protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG9g2310 PE=4 SV=1)

HSP 1 Score: 387.111 bits (993), Expect = 2.203e-134
Identity = 193/212 (91.04%), Postives = 204/212 (96.23%), Query Frame = 0
Query:    1 MNSVAVRLAKHLRVSTLTSSSLSSVSRSGTLWYSTSPSGGEDDQPSHVNGELKNEELDEEFEDLLGERPELELQGVDPKRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVGTGGMFDQRIGAKDLPKPAQWHRVAVHNDMLGAYAVQKLFKNSSVYVEGDIETRVYNDSINGDVKSIPEICIRRDGRLRLIKSGESIDKTSLDELR 212
            MNSVAVRLAKHLRVS+LTSSSL  V+RSGTLWYSTSPSGGEDDQPSH NGE KNEELDE F++LL  RPEL+LQGVDPKRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVGTGGMFDQRIG KDLPKPAQWHR+AVHNDMLGAY+VQKLFKNSSVY+EGDIETRVYNDSING+VKSIPEIC+RRDGR+RLIKSGESIDKTSLDELR
Sbjct:    6 MNSVAVRLAKHLRVSSLTSSSLGGVTRSGTLWYSTSPSGGEDDQPSHDNGEPKNEELDEGFDELLDGRPELQLQGVDPKRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVGTGGMFDQRIGPKDLPKPAQWHRIAVHNDMLGAYSVQKLFKNSSVYIEGDIETRVYNDSINGEVKSIPEICVRRDGRIRLIKSGESIDKTSLDELR 217          
BLAST of rna-XM_014657190.2 vs. UniProtKB/TrEMBL
Match: tr|A0A371FSM2|A0A371FSM2_MUCPR (Single-stranded DNA-binding protein, mitochondrial OS=Mucuna pruriens OX=157652 GN=CR513_38064 PE=4 SV=1)

HSP 1 Score: 380.563 bits (976), Expect = 2.245e-132
Identity = 186/212 (87.74%), Postives = 196/212 (92.45%), Query Frame = 0
Query:    1 MNSVAVRLAKHLRVSTLTSSSLSSVSRSGTLWYSTSPSGGEDDQPSHVNGELKNEELDEEFEDLLGERPELELQGVDPKRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVGTGGMFDQRI-GAKDLPKPAQWHRVAVHNDMLGAYAVQKLFKNSSVYVEGDIETRVYNDSINGDVKSIPEICIRRDGRLRLIKSGESIDKTSLDEL 211
            MNSVAVRLAKHLRVS L SSSL  V RSGTLWYSTS SGG DDQPSH N   KNEELDEEF+D LG +PEL+LQGVDP+RGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVGTGGMFDQRI G KDLPKPAQWHR+AVHND+LG YAVQ+LFKNSSVYVEGDIETRVYNDSING+VKSIPEIC+RRDGR+RLIKSGESIDKTSLDEL
Sbjct:    1 MNSVAVRLAKHLRVSALASSSLGGVPRSGTLWYSTSLSGGGDDQPSHDNDGPKNEELDEEFDDFLGGKPELQLQGVDPQRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVGTGGMFDQRIVGPKDLPKPAQWHRIAVHNDILGTYAVQQLFKNSSVYVEGDIETRVYNDSINGEVKSIPEICVRRDGRIRLIKSGESIDKTSLDEL 212          
BLAST of rna-XM_014657190.2 vs. UniProtKB/TrEMBL
Match: tr|I1LB73|I1LB73_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100792996 PE=4 SV=1)

HSP 1 Score: 372.859 bits (956), Expect = 1.923e-129
Identity = 180/217 (82.95%), Postives = 196/217 (90.32%), Query Frame = 0
Query:    1 MNSVAVRLAKHLRVSTLTSSSLSSVSRSGTLWYSTSPSGGEDDQPSHVNGELKNEELDEEFEDLLGERPELELQGVDPKRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVGTGGMFDQRI-GAKDLPKPAQWHRVAVHNDMLGAYAVQKLFKNSSVYVEGDIETRVYNDSINGDVKSIPEICIRRDGRLRLIKSGESIDKTSLDELREGLF 216
            MNS+AVRLAKHLR+S LTS SL  V RSG  WYSTS SGGE+D P   N   K E LDEEF+D LGE+PEL+LQGVDPK+GWGFRGVHKAIICGKVGQAPVQKILRNG+N+TIFTVGTGGMFDQRI G KDLPKPAQWHR+AVHND+LG YAVQ+LFKNSSVYVEGDIETRVYNDSING+VKSIPEIC+RRDGR+RLIK+GESIDKTSLDELREGLF
Sbjct:    1 MNSMAVRLAKHLRLSALTSFSLGGVPRSGASWYSTSLSGGENDHPLPDNDAPKKEALDEEFDDFLGEKPELQLQGVDPKKGWGFRGVHKAIICGKVGQAPVQKILRNGRNITIFTVGTGGMFDQRIQGPKDLPKPAQWHRIAVHNDILGTYAVQQLFKNSSVYVEGDIETRVYNDSINGNVKSIPEICVRRDGRIRLIKNGESIDKTSLDELREGLF 217          
BLAST of rna-XM_014657190.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445IMP1|A0A445IMP1_GLYSO (Single-stranded DNA-binding protein, mitochondrial OS=Glycine soja OX=3848 GN=D0Y65_027122 PE=4 SV=1)

HSP 1 Score: 358.607 bits (919), Expect = 2.675e-123
Identity = 180/246 (73.17%), Postives = 196/246 (79.67%), Query Frame = 0
Query:    1 MNSVAVRLAKHLRVSTLTSSSLSSVSRSGTLWYSTSPSGGEDDQPSHVNGELKNEELDEEFEDLLGERPELELQGVDPKRGWGFRGVHK-----------------------------AIICGKVGQAPVQKILRNGKNVTIFTVGTGGMFDQRI-GAKDLPKPAQWHRVAVHNDMLGAYAVQKLFKNSSVYVEGDIETRVYNDSINGDVKSIPEICIRRDGRLRLIKSGESIDKTSLDELREGLF 216
            MNS+AVRLAKHLR+S LTS SL  V RSG  WYSTS SGGE+D P   N   K E LDEEF+D LGE+PEL+LQGVDPK+GWGFRGVHK                             AIICGKVGQAPVQKILRNG+N+TIFTVGTGGMFDQRI G KDLPKPAQWHR+AVHND+LG YAVQ+LFKNSSVYVEGDIETRVYNDSING+VKSIPEIC+RRDGR+RLIK+GESIDKTSLDELREGLF
Sbjct:    1 MNSMAVRLAKHLRLSALTSFSLGGVPRSGASWYSTSLSGGENDHPLPDNDAPKKEALDEEFDDFLGEKPELQLQGVDPKKGWGFRGVHKFLTGFNLVGNRRRKSRDAMRFRDASLSKQAIICGKVGQAPVQKILRNGRNITIFTVGTGGMFDQRIQGPKDLPKPAQWHRIAVHNDILGTYAVQQLFKNSSVYVEGDIETRVYNDSINGNVKSIPEICVRRDGRIRLIKNGESIDKTSLDELREGLF 246          
BLAST of rna-XM_014657190.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445F9N5|A0A445F9N5_GLYSO (Single-stranded DNA-binding protein, mitochondrial isoform A OS=Glycine soja OX=3848 GN=D0Y65_055020 PE=4 SV=1)

HSP 1 Score: 355.525 bits (911), Expect = 1.222e-122
Identity = 176/217 (81.11%), Postives = 191/217 (88.02%), Query Frame = 0
Query:    1 MNSVAVRLAKHLRVSTLTSSSLSSVSRSGTLWYSTSPSGGEDDQPSHVNGELKNEELDEEFEDLLGERPELELQGVDPKRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVGTGGMFDQRI-GAKDLPKPAQWHRVAVHNDMLGAYAVQKLFKNSSVYVEGDIETRVYNDSINGDVKSIPEICIRRDGRLRLIKSGESIDKTSLDELREGLF 216
            MNS+AVRL KHL++S  TSSS   V RSG  WYSTS SGGE  QPS  N   KNE LD E +D LGE+ EL+LQGVDPK+GWGFRGVHKAIICGKVGQAPVQKILRNG+N+TIFTVGTGGMFDQRI G KDLPKPAQWHR+AVHND+LGAYAVQKLFKNSSVYVEGDIE RVYNDSING+VKSIPEIC+RRDG++ LIKSGESIDKTSLDELREGLF
Sbjct:    1 MNSMAVRLVKHLQLSAPTSSSFGGVPRSGASWYSTSLSGGEY-QPSQDNVAPKNEALDGELDDFLGEKAELQLQGVDPKKGWGFRGVHKAIICGKVGQAPVQKILRNGRNLTIFTVGTGGMFDQRIQGPKDLPKPAQWHRIAVHNDILGAYAVQKLFKNSSVYVEGDIEIRVYNDSINGEVKSIPEICVRRDGKICLIKSGESIDKTSLDELREGLF 216          
BLAST of rna-XM_014657190.2 vs. UniProtKB/TrEMBL
Match: tr|I1NJ41|I1NJ41_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100306124 PE=4 SV=1)

HSP 1 Score: 355.525 bits (911), Expect = 1.222e-122
Identity = 176/217 (81.11%), Postives = 191/217 (88.02%), Query Frame = 0
Query:    1 MNSVAVRLAKHLRVSTLTSSSLSSVSRSGTLWYSTSPSGGEDDQPSHVNGELKNEELDEEFEDLLGERPELELQGVDPKRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVGTGGMFDQRI-GAKDLPKPAQWHRVAVHNDMLGAYAVQKLFKNSSVYVEGDIETRVYNDSINGDVKSIPEICIRRDGRLRLIKSGESIDKTSLDELREGLF 216
            MNS+AVRL KHL++S  TSSS   V RSG  WYSTS SGGE  QPS  N   KNE LD E +D LGE+ EL+LQGVDPK+GWGFRGVHKAIICGKVGQAPVQKILRNG+N+TIFTVGTGGMFDQRI G KDLPKPAQWHR+AVHND+LGAYAVQKLFKNSSVYVEGDIE RVYNDSING+VKSIPEIC+RRDG++ LIKSGESIDKTSLDELREGLF
Sbjct:    1 MNSMAVRLVKHLQLSAPTSSSFGGVPRSGASWYSTSLSGGEY-QPSQDNVAPKNEALDGELDDFLGEKAELQLQGVDPKKGWGFRGVHKAIICGKVGQAPVQKILRNGRNLTIFTVGTGGMFDQRIQGPKDLPKPAQWHRIAVHNDILGAYAVQKLFKNSSVYVEGDIEIRVYNDSINGEVKSIPEICVRRDGKICLIKSGESIDKTSLDELREGLF 216          
BLAST of rna-XM_014657190.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9TYC0|A0A0L9TYC0_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan02g163600 PE=4 SV=1)

HSP 1 Score: 354.369 bits (908), Expect = 5.224e-122
Identity = 181/192 (94.27%), Postives = 188/192 (97.92%), Query Frame = 0
Query:    1 MNSVAVRLAKHLRVSTLTSSSLSSVSRSGTLWYSTSPSGGEDDQPSHVNGELKNEELDEEFEDLLGERPELELQGVDPKRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVGTGGMFDQRIGAKDLPKPAQWHRVAVHNDMLGAYAVQKLFKNSSVYVEGDIETRVYNDSINGDVKSIPEICIRRDG 192
            MNSVAVRLAKHLRVSTLTSSSL SVSRSGTLWYSTSPSGGEDDQPSHVNGE KNEELDE F+DLLG RPELELQGVDPKRGWGFRGVHKAIICGKVGQAPVQKILRNG+NVTIFTVGTGG+FDQRIG+KDLPKPAQWHR+AVHNDMLGAYAVQKLFKNSSVY+EGDIETRVYNDSINGDVKSIPEIC+RRDG
Sbjct:    1 MNSVAVRLAKHLRVSTLTSSSLGSVSRSGTLWYSTSPSGGEDDQPSHVNGEPKNEELDEGFDDLLGGRPELELQGVDPKRGWGFRGVHKAIICGKVGQAPVQKILRNGRNVTIFTVGTGGLFDQRIGSKDLPKPAQWHRIAVHNDMLGAYAVQKLFKNSSVYIEGDIETRVYNDSINGDVKSIPEICVRRDG 192          
The following BLAST results are available for this feature:
BLAST of rna-XM_014657190.2 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot)
Total hits: 2
Match NameE-valueIdentityDescription
sp|Q84J78|SSBP_ARATH7.075e-9863.59Single-stranded DNA-binding protein, mitochondrial... [more]
sp|Q89A53|SSB_BUCBP5.781e-1232.20Single-stranded DNA-binding protein OS=Buchnera ap... [more]
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BLAST of rna-XM_014657190.2 vs. Araport11
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11)
Total hits: 2
Match NameE-valueIdentityDescription
AT4G11060.17.238e-9963.59| mitochondrially targeted single-stranded DNA bin... [more]
AT3G18580.11.224e-2633.78| Nucleic acid-binding%2C OB-fold-like protein | C... [more]
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BLAST of rna-XM_014657190.2 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S3V2V1|A0A1S3V2V1_VIGRR1.401e-157100.00single-stranded DNA-binding protein, mitochondrial... [more]
tr|V7BK76|V7BK76_PHAVU1.162e-14290.74Uncharacterized protein OS=Phaseolus vulgaris OX=3... [more]
tr|A0A0S3SQN3|A0A0S3SQN3_PHAAN2.652e-13994.44Uncharacterized protein OS=Vigna angularis var. an... [more]
tr|A0A4D6N2X7|A0A4D6N2X7_VIGUN2.203e-13491.04Single-strand DNA-binding protein OS=Vigna unguicu... [more]
tr|A0A371FSM2|A0A371FSM2_MUCPR2.245e-13287.74Single-stranded DNA-binding protein, mitochondrial... [more]
tr|I1LB73|I1LB73_SOYBN1.923e-12982.95Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|A0A445IMP1|A0A445IMP1_GLYSO2.675e-12373.17Single-stranded DNA-binding protein, mitochondrial... [more]
tr|A0A445F9N5|A0A445F9N5_GLYSO1.222e-12281.11Single-stranded DNA-binding protein, mitochondrial... [more]
tr|I1NJ41|I1NJ41_SOYBN1.222e-12281.11Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|A0A0L9TYC0|A0A0L9TYC0_PHAAN5.224e-12294.27Uncharacterized protein OS=Phaseolus angularis OX=... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0
Date Performed: 2023-06-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000424Primosome PriB/single-strand DNA-bindingPFAMPF00436SSBcoord: 87..189
e-value: 1.7E-22
score: 79.4
IPR000424Primosome PriB/single-strand DNA-bindingPROSITEPS50935SSBcoord: 87..195
score: 12.112422
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140coord: 86..198
e-value: 3.8E-19
score: 70.6
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 85..194
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..52
IPR011344Single-stranded DNA-binding proteinPANTHERPTHR10302SINGLE-STRANDED DNA-BINDING PROTEINcoord: 59..202

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-XM_014657190.2_VrVC1973A-SNU_v1 ID=rna-XM_014657190.2_VrVC1973A-SNU_v1; Name=rna-XM_014657190.2; organism=Vigna radiata; type=mRNA; length=651bp
ATGAATTCAGTGGCGGTGAGACTTGCGAAGCATCTCCGAGTCTCTACTCT
GACCTCATCTTCCCTCAGTAGTGTGTCGAGAAGCGGAACGTTATGGTACT
CGACTTCTCCATCTGGAGGTGAAGATGATCAGCCTTCACATGTTAATGGT
GAACTGAAGAACGAAGAACTAGATGAAGAGTTTGAGGATCTTCTTGGTGA
AAGGCCTGAACTAGAACTGCAAGGTGTGGATCCCAAAAGGGGTTGGGGGT
TTCGGGGTGTGCACAAGGCAATTATTTGTGGCAAAGTTGGCCAGGCCCCT
GTACAGAAGATATTGAGGAATGGTAAAAATGTAACCATCTTTACGGTTGG
GACAGGGGGCATGTTTGATCAGAGAATTGGAGCAAAGGATTTGCCAAAGC
CTGCTCAATGGCATCGGGTTGCTGTGCATAATGATATGCTCGGGGCCTAT
GCAGTACAGAAACTCTTTAAAAACTCTTCAGTCTATGTTGAAGGTGACAT
TGAGACTAGAGTTTATAATGATAGCATCAATGGTGATGTTAAAAGCATTC
CAGAGATATGTATTCGCCGTGATGGGAGACTTCGCCTCATCAAGAGTGGA
GAAAGCATTGACAAAACTTCCTTGGATGAATTGCGTGAAGGGTTGTTTTA
G
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protein sequence of rna-XM_014657190.2_VrVC1973A-SNU_v1

>rna-XM_014657190.2_VrVC1973A-SNU_v1 ID=rna-XM_014657190.2_VrVC1973A-SNU_v1; Name=rna-XM_014657190.2_VrVC1973A-SNU_v1; organism=Vigna radiata; type=polypeptide; length=216bp
MNSVAVRLAKHLRVSTLTSSSLSSVSRSGTLWYSTSPSGGEDDQPSHVNG
ELKNEELDEEFEDLLGERPELELQGVDPKRGWGFRGVHKAIICGKVGQAP
VQKILRNGKNVTIFTVGTGGMFDQRIGAKDLPKPAQWHRVAVHNDMLGAY
AVQKLFKNSSVYVEGDIETRVYNDSINGDVKSIPEICIRRDGRLRLIKSG
ESIDKTSLDELREGLF
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mRNA from alignment at chr08:31629566..31632370-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-XM_014657190.2_VrVC1973A-SNU_v1 ID=rna-XM_014657190.2_VrVC1973A-SNU_v1; Name=rna-XM_014657190.2; organism=Vigna radiata; type=mRNA; length=2805bp; location=Sequence derived from: chr08:31629566..31632370- (Vigna radiata
AGTATAAACCCACAACGTGCTTTACAGTAAGGAGTAATTGGTTAAACCCT TGCAGTGGTTCAGCTTGGAAGGTTGTTGCCGGAAATGAATTCAGTGGCGG TGAGACTTGCGAAGCATCTCCGAGTCTCTACTCTGACCTCATCTTCCCTC AGTGCGTTTCTTTCTTTCAGTTTTCTTCGTAATCTATAACATAAATAAAT GTGGTTCTGCTCTATTTGTATGTGTTTGGTCCAATCGTCTATGGTAGCGC CTCGTTCATGAAATATGTATGCGCTGGCTATATTCTTTTGTTCAAAGGAG AATTTCGTCGAACACGTGCTGGCTAAGATTATATTTCATTTTCGTTGACA TAAGAACATAGTACATGCGTGTACATAGCAAGATGTGTGATGCTTAGCTG TAGCTTTGTTGGTGAATAAATCAGGTAGTGTGTCGAGAAGCGGAACGTTA TGGTACTCGACTTCTCCATCTGGAGGTGAAGATGATCAGCCTTCACATGT TAATGGTGAACTGAAGAACGAAGAACTAGATGAAGAGTTTGAGGATCTTC TTGGTGAAAGGCCTGAACTAGAACTGCAAGGTGTGGATCCCAAAAGGGGT TGGGGGTTTCGGGGTGTGCACAAGGTACTAGATGTTGTTAATTGATGGAT TATTATTGTTCACATCTCTAGGTTGGAATTTTGATTTGTGAACTCAACTT GTGACTGAGCAAATGTTTTTGCAATACAAGGATTTAAGAGGGTTGTAGTT TTTACTTATTTATTTATTATCATAACTAGTAGTCTTACAAGTTTGTATGG ATTGAATTTATTCTAGACAATGGTCATACTGGCCAATAGAAAGACATCAC TACAATGCTTGAAACTTTAGTTAGAAGAAAGTTTAGAGAACAAGATTTAC GTTTTCTGATGATCTTAAGCTTAAAATGACAATTTATGTAATGTTTGCAT GTTGCACCGGACAAATAATTTGACCAACGTGGTAGTGATTTTAAGCAGGC AATTATTTGTGGCAAAGTTGGCCAGGCCCCTGTACAGAAGATATTGAGGA ATGGTAAAAATGTAACCATCTTTACGGTTGGGACAGGGGGCATGTTTGAT CAGAGAATTGGAGCAAAGGATTTGCCAAAGCCTGCTCAATGGCATCGGGT TGCTGTGCATAATGATATGCTCGGGGCCTATGCAGTACAGAAACTCTTTA AAAAGTAAGTGTTTTGTATGAAAGAATATTTTATTTTAATTGTGTAAATG TTCCAAACTCATTCTTGAAGTTTTAATGCAGCTCTTCAGTCTATGTTGAA GGTGACATTGAGACTAGAGTTTATAATGATAGCATCAATGGTGATGTTAA AAGCATTCCAGAGATATGTATTCGCCGTGATGGTATGGCGACTTACATGC TTTTTTTTCTCATAGGTTGTCTGAAAGACAAACATACATTAAGTTCTTTC TTGTGGATATTGGACATTATATAGGTTTCTTTTATGTTACTTTAATGCGT CCTATTAGGTTAGAAACGTTGGCAACATTTATTTGTGCATTAACTTGCTT CTGCCTTCACATGGAATGTTAAATTTAAAAGTCAAGGGGGTTTTTGGTCC TGGGGTAAAGGTGGCTACTATCTTAAAGTTAAGCTGAAACCAATTTGGAC GGCTCCTTGTCATCAATGTTAACCTAATCATTGTAGAACCATTGTTCCCT TATCTTCAACCTTAAGCTTATTTAATTTGTTGACAACATGCTTTGTTGCA ATTTTCTGCAATAGAACTTCTGTTTTGAGAGCCCAAGTATGTTTTCTTTG CATGGAAAGGAAGATTTTATCTTTGTTTAAAAGGAGACAGCGAGCAGTGC ATTATCTTTTTACTTTTAGGGTTGTAGAGTCCTAAACTCACTGAAATTGA TTTTATTGTTTTTACTTTTCAATTAATTATTCAAACTTCTTGCTGGCATA TTGTCACTTCCTATGTTATCTCTTTAGGGAGACTTCGCCTCATCAAGAGT GGAGAAAGCATTGACAAAACTTCCTTGGATGAATTGCGTAAGTTCTTTTA ACTATAGTTGCAAATAATGACATGTTGGAAATAGTAGTGTCTACACAATT GGTAACCATTTTCAGAAGTTAATTACGTGGGTTATGACTTGGGTAAATGA GTTGAGCTGTTAGTCAACTATTCGAGTTCAACTTGTAGAATGCTCAATGA CGTGGGTTAATACTAAATTGTTTGAAGTTGTAAAATAATTTAAGAAAAAA ATCATTAAAAAGAATCAGTTCTAAATAATCCTTGCGAGGCAATTTCGAAC TTTATTTCAATCTAGAATAACCATTTTTCTTTTTCACAAGCCAAACTTGA ACTTCAAATAACTAGGCTTGACTTGGTTTGTTTACATGACGTTGCTTTTA ACTTTAAGATCGAAGTGTGTTTATTGACTGATGTTTATACCTGACAATAA TAAATATATGTGGCAGGTGAAGGGTTGTTTTAGAGGAAATCTGACCATCT GGCGGAAGCATCTACTTCTGTAAGAATCTTAGCCTTCTGAAGCACCATTT CTAATGAATAATGAATGCTTTGGTTGGATTTAATTTTTTCCAATATATTC TTTAGCATTCTGAATTTTCCCATGGTTATTTATGGAAGAGGCGTAGAAAA ACTTATTTGTTGTGGTCTCTATTTGTAGTTTGGGTATGAATATTACTAAT TCCCTAAAAATTTGGAAATATATATATCTAGTTTGCTCATGTTTGAAATG ACAGCCTATCACTTGCAATCATTTCCAGAATATTACGGGTGAGAAAAAAA TTGTT
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Coding sequence (CDS) from alignment at chr08:31629566..31632370-

>rna-XM_014657190.2_VrVC1973A-SNU_v1 ID=rna-XM_014657190.2_VrVC1973A-SNU_v1; Name=rna-XM_014657190.2; organism=Vigna radiata; type=CDS; length=651bp; location=Sequence derived from: chr08:31629566..31632370- (Vigna radiata
ATGAATTCAGTGGCGGTGAGACTTGCGAAGCATCTCCGAGTCTCTACTCT
GACCTCATCTTCCCTCAGTAGTGTGTCGAGAAGCGGAACGTTATGGTACT
CGACTTCTCCATCTGGAGGTGAAGATGATCAGCCTTCACATGTTAATGGT
GAACTGAAGAACGAAGAACTAGATGAAGAGTTTGAGGATCTTCTTGGTGA
AAGGCCTGAACTAGAACTGCAAGGTGTGGATCCCAAAAGGGGTTGGGGGT
TTCGGGGTGTGCACAAGGCAATTATTTGTGGCAAAGTTGGCCAGGCCCCT
GTACAGAAGATATTGAGGAATGGTAAAAATGTAACCATCTTTACGGTTGG
GACAGGGGGCATGTTTGATCAGAGAATTGGAGCAAAGGATTTGCCAAAGC
CTGCTCAATGGCATCGGGTTGCTGTGCATAATGATATGCTCGGGGCCTAT
GCAGTACAGAAACTCTTTAAAAACTCTTCAGTCTATGTTGAAGGTGACAT
TGAGACTAGAGTTTATAATGATAGCATCAATGGTGATGTTAAAAGCATTC
CAGAGATATGTATTCGCCGTGATGGGAGACTTCGCCTCATCAAGAGTGGA
GAAAGCATTGACAAAACTTCCTTGGATGAATTGCGTGAAGGGTTGTTTTA
G
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR000424Primosome_PriB/ssb
IPR012340NA-bd_OB-fold
IPR011344ssDNA-bd
Vocabulary: Molecular Function
TermDefinition
GO:0003697single-stranded DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication