rna-XM_014657281.2

Transcript Overview
Namerna-XM_014657281.2
Unique Namerna-XM_014657281.2_VrVC1973A-SNU_v1
TypemRNA
OrganismVigna radiata (Mung bean, green gram)
Sequence length321
Productmitochondrial zinc maintenance protein 1, mitochondrial, transcript variant X2
References
External references for this mRNA
DatabaseAccession
GeneID106771321
GenbankXM_014657281.2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr08chromosomechr08:27678525..27684905 -Vigna radiata cv. VC1973A genome v6.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
asvrvL369Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anvrvL0657Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
caivrvL411Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavrvL346Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvrvL0658Cajanus cajan Asha genome v1.0Cajanus cajan
crvrvL386Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
psvrvL562Pisum sativum Cameor genome v1aPisum sativum
pvvrvL612Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
tifvrvL393Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvrvL408Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
canvrvL320Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvrvL316Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvrvL317Cicer arietinum
ccavrvL270Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vasvrvL583Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvrvL567Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
Cr_08239.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
rna-TanjilR_01817Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Phvul.007G146200.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vfaba.Tiffany.R1.3g082000.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Ca_09869.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
rna-KK1_006858Cajanus cajan Asha genome v1.0Cajanus cajan
PvulFLAVERTChr07.941Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Ca_03459Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vfaba.Hedin2.R1.3g101880.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vigan.08G247500.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Va02G039070.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
LR48_mrnaVigan02g106200Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Cc_v2.0_03695.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
rna-XM_004495901.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Psat6g166360.1Pisum sativum Cameor genome v1aPisum sativum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LOC106771321gene-LOC106771321_VrVC1973A-SNU_v1Vigna radiatagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_014657281.2-3exon-XM_014657281.2-3_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_014657281.2-2exon-XM_014657281.2-2_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_014657281.2-1exon-XM_014657281.2-1_VrVC1973A-SNU_v1Vigna radiataexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-XP_014512767.1cds-XP_014512767.1_VrVC1973A-SNU_v1_2Vigna radiataCDS
cds-XP_014512767.1cds-XP_014512767.1_VrVC1973A-SNU_v1Vigna radiataCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-XM_014657281.2_VrVC1973A-SNU_v1rna-XM_014657281.2_VrVC1973A-SNU_v1Vigna radiatapolypeptide
rna-XM_014657281.2_VrVC1973A-SNU_v1rna-XM_014657281.2_VrVC1973A-SNU_v1-proteinVigna radiatapolypeptide


Homology
[Close]
BLAST of rna-XM_014657281.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q0UIG9|MZM1_PHANO (Mitochondrial zinc maintenance protein 1, mitochondrial OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=MZM1 PE=3 SV=2)

HSP 1 Score: 57.3806 bits (137), Expect = 7.395e-11
Identity = 33/85 (38.82%), Postives = 49/85 (57.65%), Query Frame = 0 
Query:    1 MARREVLSAYRALLKATRKTFSGDTVMLKESALEVRKKFEENRNVSSEA-EIQKLLEEAGEASDFITNMIVQAQLNTDAGSYVVK 84
            M+R   L AYR LL++ R  F GD   L  +  EVR+ FE NR++++ + E+ K L  A E + F+   +VQ Q   D GSY ++
Sbjct:    1 MSREMALVAYRNLLRSARVAFQGDMNTLFAARAEVRRNFESNRSLTAGSDELSKQLTHAEEVAKFLRENVVQGQAADDEGSYKLR 85
[Close]
BLAST of rna-XM_014657281.2 vs. Araport11
Match: AT3G62810.2 (| complex 1 family protein / LVR family protein | Chr3:23227763-23228180 FORWARD LENGTH=106 | 201606)

HSP 1 Score: 131.339 bits (329), Expect = 6.909e-41
Identity = 68/104 (65.38%), Postives = 84/104 (80.77%), Query Frame = 0 
Query:    1 MARREVLSAYRALLKATRKTFSGDTVMLKESALEVRKKFEENRNVSSEAEIQKLLEEAGEASDFITNMIVQAQLNTDAGSYVVKPGKEHAGATLELPSEEILRK 104
            M   E L AYRALL+AT+K+F+GDT MLK SA E+RKKFEENR V+S ++I +LLEEA EA+ FI+ MIVQA+LN + G Y +K  +EHAGATLELPSEE+LRK
Sbjct:    1 MVTGEALIAYRALLRATKKSFAGDTEMLKASASEIRKKFEENRLVASNSDITRLLEEAREATQFISTMIVQAKLN-ERGGYEMKASQEHAGATLELPSEEMLRK 103
[Close]
BLAST of rna-XM_014657281.2 vs. Araport11
Match: AT3G62810.1 (| complex 1 family protein / LVR family protein | Chr3:23227763-23228180 FORWARD LENGTH=106 | 201606)

HSP 1 Score: 131.339 bits (329), Expect = 6.909e-41
Identity = 68/104 (65.38%), Postives = 84/104 (80.77%), Query Frame = 0 
Query:    1 MARREVLSAYRALLKATRKTFSGDTVMLKESALEVRKKFEENRNVSSEAEIQKLLEEAGEASDFITNMIVQAQLNTDAGSYVVKPGKEHAGATLELPSEEILRK 104
            M   E L AYRALL+AT+K+F+GDT MLK SA E+RKKFEENR V+S ++I +LLEEA EA+ FI+ MIVQA+LN + G Y +K  +EHAGATLELPSEE+LRK
Sbjct:    1 MVTGEALIAYRALLRATKKSFAGDTEMLKASASEIRKKFEENRLVASNSDITRLLEEAREATQFISTMIVQAKLN-ERGGYEMKASQEHAGATLELPSEEMLRK 103
[Close]
BLAST of rna-XM_014657281.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3V340|A0A1S3V340_VIGRR (mitochondrial zinc maintenance protein 1, mitochondrial OS=Vigna radiata var. radiata OX=3916 GN=LOC106771321 PE=4 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 5.388e-70
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0 
Query:    1 MARREVLSAYRALLKATRKTFSGDTVMLKESALEVRKKFEENRNVSSEAEIQKLLEEAGEASDFITNMIVQAQLNTDAGSYVVKPGKEHAGATLELPSEEILRKSG 106
            MARREVLSAYRALLKATRKTFSGDTVMLKESALEVRKKFEENRNVSSEAEIQKLLEEAGEASDFITNMIVQAQLNTDAGSYVVKPGKEHAGATLELPSEEILRKSG
Sbjct:    1 MARREVLSAYRALLKATRKTFSGDTVMLKESALEVRKKFEENRNVSSEAEIQKLLEEAGEASDFITNMIVQAQLNTDAGSYVVKPGKEHAGATLELPSEEILRKSG 106
[Close]
BLAST of rna-XM_014657281.2 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6MYM6|A0A4D6MYM6_VIGUN (Complex 1 LYR protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG9g1607 PE=4 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 8.665e-69
Identity = 103/106 (97.17%), Postives = 106/106 (100.00%), Query Frame = 0 
Query:    1 MARREVLSAYRALLKATRKTFSGDTVMLKESALEVRKKFEENRNVSSEAEIQKLLEEAGEASDFITNMIVQAQLNTDAGSYVVKPGKEHAGATLELPSEEILRKSG 106
            MARREVLSAYRALLKATRKTFSGDTVML+ESA+EVRKKFEENRNVSSEAEIQKLLEEAGEASDFITNMIVQAQLNTDAGSYVVKPGKEHAGATLELPSEEI+RKSG
Sbjct:    1 MARREVLSAYRALLKATRKTFSGDTVMLRESAVEVRKKFEENRNVSSEAEIQKLLEEAGEASDFITNMIVQAQLNTDAGSYVVKPGKEHAGATLELPSEEIIRKSG 106
[Close]
BLAST of rna-XM_014657281.2 vs. UniProtKB/TrEMBL
Match: tr|V7BHG0|V7BHG0_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_007G146200g PE=4 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 1.198e-66
Identity = 101/106 (95.28%), Postives = 104/106 (98.11%), Query Frame = 0 
Query:    1 MARREVLSAYRALLKATRKTFSGDTVMLKESALEVRKKFEENRNVSSEAEIQKLLEEAGEASDFITNMIVQAQLNTDAGSYVVKPGKEHAGATLELPSEEILRKSG 106
            MAR EVLSAYRALLKATRKTFSGDTVMLKESA+E+RKKFEENRNVSSEAEIQKLLEEA EASDFITNMIVQAQLNTDAGSYVVKPGKEHAGATLELPSEEI+RKSG
Sbjct:    1 MARMEVLSAYRALLKATRKTFSGDTVMLKESAVELRKKFEENRNVSSEAEIQKLLEEAAEASDFITNMIVQAQLNTDAGSYVVKPGKEHAGATLELPSEEIIRKSG 106
[Close]
BLAST of rna-XM_014657281.2 vs. UniProtKB/TrEMBL
Match: tr|A0A151U4H8|A0A151U4H8_CAJCA (LYR motif-containing protein 7 OS=Cajanus cajan OX=3821 GN=KK1_006858 PE=4 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 4.591e-60
Identity = 93/106 (87.74%), Postives = 101/106 (95.28%), Query Frame = 0 
Query:    1 MARREVLSAYRALLKATRKTFSGDTVMLKESALEVRKKFEENRNVSSEAEIQKLLEEAGEASDFITNMIVQAQLNTDAGSYVVKPGKEHAGATLELPSEEILRKSG 106
            MAR +VLSAYRALLKATRKTFSGDT+MLKESA+EVRKKFEEN+NVSS+AEIQKLL EA EAS FITNMIVQAQLN+DAGSYVVKPGKEHAGATLELP+EE +RKSG
Sbjct:    1 MARGKVLSAYRALLKATRKTFSGDTMMLKESAVEVRKKFEENKNVSSDAEIQKLLLEAEEASHFITNMIVQAQLNSDAGSYVVKPGKEHAGATLELPTEETIRKSG 106
[Close]
BLAST of rna-XM_014657281.2 vs. UniProtKB/TrEMBL
Match: tr|A0A371E558|A0A371E558_MUCPR (Mzm1 (Fragment) OS=Mucuna pruriens OX=157652 GN=MZM1 PE=4 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 4.958e-60
Identity = 94/106 (88.68%), Postives = 99/106 (93.40%), Query Frame = 0 
Query:    1 MARREVLSAYRALLKATRKTFSGDTVMLKESALEVRKKFEENRNVSSEAEIQKLLEEAGEASDFITNMIVQAQLNTDAGSYVVKPGKEHAGATLELPSEEILRKSG 106
            MAR EVLSAYRALLKATRKTFSGDT+MLKESA EVRKKF ENRNVSSEAEIQKL+EEAGEAS FITNMIVQAQLN +AGSYVVKPGKEHAGATLELP+EE +RK G
Sbjct:    1 MARGEVLSAYRALLKATRKTFSGDTLMLKESAAEVRKKFMENRNVSSEAEIQKLVEEAGEASHFITNMIVQAQLNPEAGSYVVKPGKEHAGATLELPTEETIRKLG 106
[Close]
BLAST of rna-XM_014657281.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2XZ69|A0A1S2XZ69_CICAR (mitochondrial zinc maintenance protein 1, mitochondrial OS=Cicer arietinum OX=3827 GN=LOC101493082 PE=4 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 3.347e-59
Identity = 90/106 (84.91%), Postives = 100/106 (94.34%), Query Frame = 0 
Query:    1 MARREVLSAYRALLKATRKTFSGDTVMLKESALEVRKKFEENRNVSSEAEIQKLLEEAGEASDFITNMIVQAQLNTDAGSYVVKPGKEHAGATLELPSEEILRKSG 106
            MAR +VLSAYRALLKATRK+F+GDT+MLK SA+EVRKKFEEN+NV+SE EIQKLLEEA EASDFIT MIVQAQLN+DAGSYVVKPGKEHAGATLE+PSEEI+ KSG
Sbjct:    1 MAREKVLSAYRALLKATRKSFAGDTLMLKGSAVEVRKKFEENKNVTSETEIQKLLEEAAEASDFITTMIVQAQLNSDAGSYVVKPGKEHAGATLEIPSEEIIGKSG 106
[Close]
BLAST of rna-XM_014657281.2 vs. UniProtKB/TrEMBL
Match: tr|I1JBL5|I1JBL5_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100305547 PE=4 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 3.182e-57
Identity = 89/106 (83.96%), Postives = 99/106 (93.40%), Query Frame = 0 
Query:    1 MARREVLSAYRALLKATRKTFSGDTVMLKESALEVRKKFEENRNVSSEAEIQKLLEEAGEASDFITNMIVQAQLNTDAGSYVVKPGKEHAGATLELPSEEILRKSG 106
            MAR +VLSAYRALLKATRK+FSGDT+MLKESALEVR KFEEN++VSS+AEIQKLL EA EAS FIT MIVQAQLN D+G+Y+VKPGKEHAGATLELPSEEI+RKSG
Sbjct:    1 MARGQVLSAYRALLKATRKSFSGDTMMLKESALEVRNKFEENKSVSSQAEIQKLLLEAEEASHFITTMIVQAQLNPDSGTYLVKPGKEHAGATLELPSEEIIRKSG 106
[Close]
BLAST of rna-XM_014657281.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2PHK6|A0A0B2PHK6_GLYSO (Mitochondrial zinc maintenance protein 1, mitochondrial OS=Glycine soja OX=3848 GN=D0Y65_002709 PE=4 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 3.182e-57
Identity = 89/106 (83.96%), Postives = 99/106 (93.40%), Query Frame = 0 
Query:    1 MARREVLSAYRALLKATRKTFSGDTVMLKESALEVRKKFEENRNVSSEAEIQKLLEEAGEASDFITNMIVQAQLNTDAGSYVVKPGKEHAGATLELPSEEILRKSG 106
            MAR +VLSAYRALLKATRK+FSGDT+MLKESALEVR KFEEN++VSS+AEIQKLL EA EAS FIT MIVQAQLN D+G+Y+VKPGKEHAGATLELPSEEI+RKSG
Sbjct:    1 MARGQVLSAYRALLKATRKSFSGDTMMLKESALEVRNKFEENKSVSSQAEIQKLLLEAEEASHFITTMIVQAQLNPDSGTYLVKPGKEHAGATLELPSEEIIRKSG 106
[Close]
BLAST of rna-XM_014657281.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445IGS1|A0A445IGS1_GLYSO (Mitochondrial zinc maintenance protein 1, mitochondrial OS=Glycine soja OX=3848 GN=D0Y65_025742 PE=4 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 6.493e-57
Identity = 89/106 (83.96%), Postives = 97/106 (91.51%), Query Frame = 0 
Query:    1 MARREVLSAYRALLKATRKTFSGDTVMLKESALEVRKKFEENRNVSSEAEIQKLLEEAGEASDFITNMIVQAQLNTDAGSYVVKPGKEHAGATLELPSEEILRKSG 106
            M R +VLSAYRALLKATRKTFSGDT+MLKESA+EVRKKFEEN+NVSSEAEIQKLL EA EAS FITNM+VQAQLN D+G+Y VKP KEHAGATLELPSEEI+RKS 
Sbjct:    1 MGRGQVLSAYRALLKATRKTFSGDTMMLKESAVEVRKKFEENKNVSSEAEIQKLLLEAEEASHFITNMLVQAQLNPDSGTYAVKPCKEHAGATLELPSEEIIRKSA 106
[Close]
BLAST of rna-XM_014657281.2 vs. UniProtKB/TrEMBL
Match: tr|C6SWM9|C6SWM9_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100305793 PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 6.493e-57
Identity = 89/106 (83.96%), Postives = 97/106 (91.51%), Query Frame = 0 
Query:    1 MARREVLSAYRALLKATRKTFSGDTVMLKESALEVRKKFEENRNVSSEAEIQKLLEEAGEASDFITNMIVQAQLNTDAGSYVVKPGKEHAGATLELPSEEILRKSG 106
            M R +VLSAYRALLKATRKTFSGDT+MLKESA+EVRKKFEEN+NVSSEAEIQKLL EA EAS FITNM+VQAQLN D+G+Y VKP KEHAGATLELPSEEI+RKS 
Sbjct:    1 MGRGQVLSAYRALLKATRKTFSGDTMMLKESAVEVRKKFEENKNVSSEAEIQKLLLEAEEASHFITNMLVQAQLNPDSGTYAVKPCKEHAGATLELPSEEIIRKSA 106
The following BLAST results are available for this feature:
BLAST of rna-XM_014657281.2 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
sp|Q0UIG9|MZM1_PHANO7.395e-1138.82Mitochondrial zinc maintenance protein 1, mitochon... [more]
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BLAST of rna-XM_014657281.2 vs. Araport11
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11)
Total hits: 2
Match NameE-valueIdentityDescription
AT3G62810.26.909e-4165.38| complex 1 family protein / LVR family protein | ... [more]
AT3G62810.16.909e-4165.38| complex 1 family protein / LVR family protein | ... [more]
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BLAST of rna-XM_014657281.2 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S3V340|A0A1S3V340_VIGRR5.388e-70100.00mitochondrial zinc maintenance protein 1, mitochon... [more]
tr|A0A4D6MYM6|A0A4D6MYM6_VIGUN8.665e-6997.17Complex 1 LYR protein OS=Vigna unguiculata OX=3917... [more]
tr|V7BHG0|V7BHG0_PHAVU1.198e-6695.28Uncharacterized protein OS=Phaseolus vulgaris OX=3... [more]
tr|A0A151U4H8|A0A151U4H8_CAJCA4.591e-6087.74LYR motif-containing protein 7 OS=Cajanus cajan OX... [more]
tr|A0A371E558|A0A371E558_MUCPR4.958e-6088.68Mzm1 (Fragment) OS=Mucuna pruriens OX=157652 GN=MZ... [more]
tr|A0A1S2XZ69|A0A1S2XZ69_CICAR3.347e-5984.91mitochondrial zinc maintenance protein 1, mitochon... [more]
tr|I1JBL5|I1JBL5_SOYBN3.182e-5783.96Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|A0A0B2PHK6|A0A0B2PHK6_GLYSO3.182e-5783.96Mitochondrial zinc maintenance protein 1, mitochon... [more]
tr|A0A445IGS1|A0A445IGS1_GLYSO6.493e-5783.96Mitochondrial zinc maintenance protein 1, mitochon... [more]
tr|C6SWM9|C6SWM9_SOYBN6.493e-5783.96Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0
Date Performed: 2023-06-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008011Complex 1 LYR protein domainPFAMPF05347Complex1_LYRcoord: 4..59
e-value: 8.7E-13
score: 48.1
NoneNo IPR availablePANTHERPTHR46749COMPLEX III ASSEMBLY FACTOR LYRM7coord: 3..104
IPR045298LYRM7, LYR domainCDDcd20267Complex1_LYR_LYRM7coord: 6..75
e-value: 6.55874E-25
score: 87.6191

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-XM_014657281.2_VrVC1973A-SNU_v1 ID=rna-XM_014657281.2_VrVC1973A-SNU_v1; Name=rna-XM_014657281.2; organism=Vigna radiata; type=mRNA; length=321bp
ATGGCGAGGAGGGAAGTTCTGAGCGCGTACCGGGCGCTTCTGAAAGCGAC
TAGGAAAACATTTTCCGGCGACACTGTGATGTTGAAGGAATCGGCGTTAG
AGGTAAGGAAGAAGTTTGAGGAGAACAGGAACGTGAGCTCAGAGGCCGAG
ATTCAGAAGCTTCTCGAAGAAGCCGGCGAGGCTTCCGATTTCATCACCAA
CATGATCGTCCAGGCACAACTCAACACCGATGCCGGAAGTTACGTGGTGA
AGCCGGGTAAAGAGCATGCTGGTGCAACACTTGAACTCCCCTCGGAAGAA
ATTCTTCGGAAATCAGGATGA
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protein sequence of rna-XM_014657281.2_VrVC1973A-SNU_v1

>rna-XM_014657281.2_VrVC1973A-SNU_v1 ID=rna-XM_014657281.2_VrVC1973A-SNU_v1; Name=rna-XM_014657281.2_VrVC1973A-SNU_v1; organism=Vigna radiata; type=polypeptide; length=106bp
MARREVLSAYRALLKATRKTFSGDTVMLKESALEVRKKFEENRNVSSEAE
IQKLLEEAGEASDFITNMIVQAQLNTDAGSYVVKPGKEHAGATLELPSEE
ILRKSG
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mRNA from alignment at chr08:27678525..27684905-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-XM_014657281.2_VrVC1973A-SNU_v1 ID=rna-XM_014657281.2_VrVC1973A-SNU_v1; Name=rna-XM_014657281.2; organism=Vigna radiata; type=mRNA; length=6381bp; location=Sequence derived from: chr08:27678525..27684905- (Vigna radiata
AGGGTTTGTAAAAGAAAAGAGAAATACAGGGTGTGATTGAACTGCTACAC
ATCAAAAGAAGCTAAACTAAGAACGACGCCAAGAAGAAAAAGAGAGATCG
GAGAGAGTGAGATGGCGAGGAGGGAAGTTCTGAGCGCGTACCGGGCGCTT
CTGAAAGCGACTAGGAAAACATTTTCCGGCGACACTGTGATGTTGAAGGA
ATCGGCGTTAGAGGTAAGGAAGAAGTTTGAGGAGAACAGGAACGTGAGCT
CAGAGGCCGAGATTCAGAAGCTTCTCGAAGAAGCCGGCGAGGCTTCCGAT
TTCATCACCAACATGATCGTCCAGGCACAACTCAACACCGATGCCGGAAG
TTACGGTATGCTCTATATGAAAATATATCTATTAATTACTACTTCAGAGA
CTCGCATTTCAGTCACTGTAAGACCATGACCTCATGGAGCTTGCATTAAG
AGGTCATAACATTAATGTCGCATTTCAGTTTATTTATTTAGAAAACTTGG
TTTCTGTTGATTGTTTAGTTTAGGATATCATGCTACTAATGACTTGTCGA
TGACCCTAGCCTGCTCCTATTTCCTCTTGTTTTGGATTTGGACCATGTTT
GGATTATACAAAATGAGAAGATGAAATTCATTGGGTTTTATAGAATCTCT
TTTCATTTGACTTCTCAATAAACCAAAGATCGAAAGTTGATTTTAGCTTA
CGGTTGTCTTTATATTTTATTTTCCTACAAATGTTTATGTTGAAGTTTCT
TCAAAGTGGATCTTACCCGAGTTTGTGGCTTGCTAATAACTTTGGAATTA
CTGATTAATAGAAGCATGTCATTTCCAATTATGGCATTCGTTTTTGAGAT
AGGTTTCCAGTGCTACCTCCATATGAATTAAAAATTACTTTTCATTGCCT
ACCAAAGTCTTAAATTTTGTTAGTCTTGGGGTTTGGAATTGCAATTCATG
TATTTACATTATCTGGATATTCTGTTAGAATTTTCCTGGAAAGGCACTGA
AGAAAATCTATACTAATGAGTCGTGAATAAAGTCATATAAAAGACCAAAA
CACTTCTATCAATCCAAAACTTTAAGATAATAGGTTTGTTTATGAATGAT
TCTGCTTATATATTATCCATTTTACTCATTTCTAACCAAGGTAGGACTTC
AAACTCACCTTAAATTCCTAACATATTCAAAAAATGGTCATTTCAGTCAG
GCATTTGAGATTTATACACGTATCATATCTGCCTGTTTTCTTAAAAAGAG
TATCTTTTGTAGTTTTACATTTGAATACTGTGGCTTTGCTTTTCATCATT
TTTGTTTTTAGCTTTGGAGGAGCTAAGAACTTTATTTGATAAAATCTGTA
TGAGTACACTGAGTCCTTTTATAATTTTTTTTAAACTTATTGCTGCAGTG
GTGAAGCCGGGTAAAGAGCATGCTGGTGCAACACTTGAACTCCCCTCGGA
AGAAATTCTTCGGAAATCAGGATGAGGATAGACAAGAGAGAAGAGGTTAG
AACACGGTGTTCTCTCTTCTAGATTTTTTATTTAGGATCAATAAGTAGTA
TTGCCAGTAATTTTATGGAGGTGCTTCAAATTTTCTGCCTATATTCCTTT
TTGTGGTTGTAATTTTTTGTTGCTCCTAATCCTTTGTTTCCTTTCAAATC
TATCTGGCAGAGTGGATAGGATATAAATCTGACTGGTAAAAGTATATGAT
ACCCTTCATTTGTCCTATGATTACATAATTTATCAAAATTGTTTGCTGGC
TTTTTTTAATTTTCCTGTAACATAATTTCTAATTGATTTAGATGAAATTG
CAGTCCCTGTAGTTTATACTTGGGTATTGGTCTATGGGTGAACTTTGATA
AGGAGAAACTCGGATGTACATACAGGGATTAAAACCTAAGGGTAAAAATC
TAGGAACTGGTACCTTATAAGACAGGGAGCCAAAACTGAAACAAGAGAAG
AAACTGTTATTTAGTGCTGATACATGTGTTTAAGTTAAAAGTATAACCAT
GATAGACTGCTTGACAAGGGCCATAAATGCTGGATCAGATGAAGATTCCT
TAATAGACCTTAAGCAATGTAGGCTCATGATATGGAGAGTTTATGAGTTT
GAGAACAAGAAAGAGAAGAGGGAAGAGAAATTAAGGAGCTGCTGATGTGG
CAGGTAGTTAAGAATGATTATAGGGAGAGGCTGAAGGAGTGGAGGATCAT
TGCATATCTTTTCTGTTAGAATCCTTCAGGTTGGCAGAGAGAGGATTAAT
CCCTCTGCGAGGAGCATAGCTCTGGTTGTTCTCGAGAGCTTAGGCTCTTT
CTGCATTTCTAATAGATACTGTTCTTATTTTATCATTCCTTCTGCTAGAA
GCAGAACAATCCTGAGCCTGAACAGTACAAACTGTACCGTAATCTGACAA
GTCAATAATCATTTGTGCTGTTTCATAATACTATAGAGAATTTGAATAGA
AGACAGAGTGTTGCTGTTAGCAAAATTGATGGTTATAAATTTTTTTATAG
CACACCTTGCTCGATATTGCTTAGTTCGAAGAATAAATATAAGTAGCATT
TGTAGCCAAGTTAGAATAAAAATTCCTACACCAAATATAACATGGATTGT
GGTTTGCACTCGGTGTTCAGAGAACAGAAGTACATAAAAATACCATATGT
TATTTATTCTAAAAGGGGGGAAATCAAAGAAAACAGACTTTTATTTGTTA
TGTTTGCATGCCACATGCTACCATAAGATGGACTTGTGCTCACTCTATAC
TGTAGTGTGTGTGAAGCAAGAGATCAAACCCATTGGAGAGATGGGGATTT
CTGTCAAAAAAGGATCAAGCCTATTAGAGTTAATTAATAAATTGATTTGG
AAGGAATTCAAGTTGCTTATTATTGATGAACCTAATATTTTACTTCAAAT
TACAAAAACTAAACCTCGTTAAACCTTGCGTGTGTACCTTGTTCTAATCA
GATTCTAGTTGGCTTTTAATTCAAGTCAGACGAATAATAATCAATATCTT
GTACCCATTTTTTAAAAATTTATAGAAAAAGGAAAGCATAAAATAGACCC
CGTGTAATGGATTTTCTGTCACTCTCGTCTTTTTCTTCTTCTCATGACTT
CCTTTTCATTAGCATTTTAGCTATTGGGAAGAAGTTAAAATTACTAACTA
GACGTTAGATACAAGTGATGGCAATATGACACTGTTGGTAGGTCTTATAT
TTTAATACGAGGAAGGACTAACAAAATACATAGTACTTCAAATAATTGAT
GACTGTAAGTACCGCCCTTTTTCACAGGTTTTCGTTAGTATGTTGATGAA
ATTGATTATTGTAAATGTTTGTTATATTTTTGTTCTTACCAGAAAATGAA
TGTTTTTGAGTCAAACTGTTTTCCAATTTGAGTTTAATCGTGATAATGCT
TGTAAAATGGATTGAACATATCATCGTAGGAAAATCCATTTCCAAATTAT
ATTCTAATTGTAAAGTGAATAACTGAACAGCAGAATAATGAGCGACAAAT
AAATATGAATATTGAGAGTGAGTTGTAGTAAGATTTTCTGATGTGGTCAT
GTTTTTATATAGGTTTCTGTGTAAGCTTATCTTTTTGTCTATGATATATC
TTATCATGTTAAGTTATAGTCAAGTAGTATATTTGAAATAGTTAGATTTT
ATTTGTTGATTATGTGATTAATATGTGAATAATAGATTATTTGTATAATT
TTCGAGTTATAAGATTTAGTTTGAATGTCTTAAATGTGAATAGATATATA
ACTTCTTCAAGTTCAAAACTAAATTAAGCACATGGACAATGGTGAAGAAG
TTCTGAATAACTTAAAAAATCTTAGCGTGGTGCTACTTTTAAGTATGTTT
ACAAAGACAAAAAAGTTTGGGGCCTTCTCCTGCACTTCCAAGATTTCTCT
TTGTACTTTTAAGTTCATAGCTTTGCCTTTAGTAAAAATATATATAAAAT
AAAATAAAATTAGATAAACAGTAATTATTGCTTATGAATCGTATTTACTT
ATCCTTTATATTTATTGTCATGCACACCAAGTTTCTTCAAAGGTCTTGCT
TGTCTATTTTTTTTTGCTTGTGGTTTTAATGGGCTTGTTGTGGTGGTGTG
CTTGTTTTGTTCCACTTGATCTCTTTTCGGATTAATATTATATTTTTCAC
GTGATCAATTTTATTTTCTTCATTTCATCTTGTATCTTTTAGGTATAAGC
GTTTTTCTCGTTAAGTTAGGTTTGAACTTTTTATATTTATTTCGTTTGAA
ATTTATATTTGTTTTTATTATATTTTACATGTATTGAATTTTGAAATTCG
ATTTAAGAAACTTATTGAATTTGGAAATCTAATTTAAGAAACTTATTGAA
TTTCAAAATTTAGTTAAGAAACTATTGGGATTTTAAAATTTGATTAAGGA
AATCATTAAATTTTGAAATCCGATTAACATTTTAATCGAATTTCGTAAGT
TAACTATTTCTCTTGGATTTTGAAATTTGGTGAATATCAATCAGATTTCA
AATCCTGGTTTTCATTTAATATTTTTTTTCTAATTTCTTTTTAACTTTTT
CTGCTTTAATTTTTTTAAATTTGTTTTACTTTTATTTTATAATTTTTTGA
GGTATTATTATTATACTTATTATTATTATTATTATTATTATTATTTTTCT
ATCATCATCATCATCATCATAAAAGTAAGATATTTAATGGTGGTGATGTT
ATGTTATAGGTGGTTTATATTGTAAGATGGAATATTGATGAATTCATAAG
TAAATTCGAATTTTATGTCTGATTTCTTTTCTTTTATTAATGAAATGTGC
GAAGAAGATTAAACAGATAATTTTACAATTGTTCAGATTTTGATCTTAGT
TTTGTTGTTGTAATTATAAGATTTGATAATGTTAATGTTCAACTTGGAAT
AAAAACGTTTGTGTTAGGATGTGAAAGGGATGGAAAATATATGAAATACA
AATCTCATGTCCATCTTAGTATATATGACACAAGAAAATGTGAGTGTCAT
CTTAAATTGAGAGGCAAATCAATTTCTAATGGAGAATGGTGGGTATTAAA
GCTAATATGTGAATATCATAACTATGATTTGACGCATAAAGTTTAATAAG
TCACCCTTTTATTGAGAGGTTAAATTCTACTAAACAGTAATTGCTTATGG
ATATGACTAAGGGTCAAGTAAAGTCTGCAAACATTCTCCTCAATCTTAAA
GAAAATAATGATTGTAATGTGATCAATTAAGGAAGTATATAATGCAAGAT
ATACCTACAAACAATCATTGAGAGGTTCGAGAATAGAATTACCACATTTG
ATGATGTTAAAACGTGATAAATACATCAATTAGAGTAAATATGTCGACAA
ATTTAAGGTGGTAAGTGACTTCTCTTGGACATATTCTGAAGCAGTTAAAT
TGTTGAATATATTTAATATTGTTTTGTTAATGAATAACATATACAAAACT
AACAAATATCAGTTATCATTGTTTGAGATAATTGGGGTCACATCAACAGG
GTTGACTTTCTTAGTGACCTTTGTATTCTTATCAAGTGAACGACAAAATA
ATTTCACTTGGGCTCTAAAAAGACTAAGGATTATTTGACATATGAGGGTG
ATTCACATGTATTGTTAGCGATAGATACCTAACTTTGATGAATGACATTG
GATTTGTATTCTCTAAATGTTATCATCTCCTATGCTGCTTTCATATTTAG
AAAAATTTGCAAGCCAAGTACAAAATGTTAGTCAATTTTATTAAAGCATG
AGATGTCATCTTGAAAGCATGAGAAAATGTTATAAATTTTGAACATGAAC
CAATGTTTACTGATTGTGTTGGTCTCCTTCATTGTGATTTTTTATGGCCT
TTATTTTTTGAATATGTCAACGAGTCTTGAATTATTTTGTATAAGACATA
CTTTGTAATGATCTGGACAAACTGAGTTATGCATTTAGGAAACACAAGAT
AAAACAAGTATGTTTTAATCTTATTATACTAAGTAGTTTTTGTTAGATGC
TTTATGATATTATTCAAGTAGGCCCTGTGTAGCGTAATCTTACTATTGGT
TCTCATAATAGTTGTTGTATATGTCTCTCAACCAGCTTAGTCTAACTTAG
GGATCATGACATCGTGTCAGTTCAGATGTAGCCCTCGTGCGATCCACGCC
CAATAGGTGGATGATAATACTTCGAGTTGCTTCAAAGTCTGGGACTTCAT
TCAGACATAATTGTCCCACTGTAGACAAATGTAGCAGCGTGAACGTGTCA
TCTAGTGTGACCGTCATCTCACCAACAATTATATAAAAAGTTTTTGTCTT
TCTATGTCATCTCTCAATGAATGCCAATATTATGTCCATATTGATGTAAT
CATAAAAAAATATCACATAGATGCATCAAAC
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Coding sequence (CDS) from alignment at chr08:27678525..27684905-

>rna-XM_014657281.2_VrVC1973A-SNU_v1 ID=rna-XM_014657281.2_VrVC1973A-SNU_v1; Name=rna-XM_014657281.2; organism=Vigna radiata; type=CDS; length=321bp; location=Sequence derived from: chr08:27678525..27684905- (Vigna radiata
ATGGCGAGGAGGGAAGTTCTGAGCGCGTACCGGGCGCTTCTGAAAGCGAC
TAGGAAAACATTTTCCGGCGACACTGTGATGTTGAAGGAATCGGCGTTAG
AGGTAAGGAAGAAGTTTGAGGAGAACAGGAACGTGAGCTCAGAGGCCGAG
ATTCAGAAGCTTCTCGAAGAAGCCGGCGAGGCTTCCGATTTCATCACCAA
CATGATCGTCCAGGCACAACTCAACACCGATGCCGGAAGTTACGTGGTGA
AGCCGGGTAAAGAGCATGCTGGTGCAACACTTGAACTCCCCTCGGAAGAA
ATTCTTCGGAAATCAGGATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR008011Complex1_LYR_dom
IPR045298Complex1_LYR_LYRM7
Vocabulary: Biological Process
TermDefinition
GO:0034551mitochondrial respiratory chain complex III assembly