rna-XM_014657592.2

Transcript Overview
Namerna-XM_014657592.2
Unique Namerna-XM_014657592.2_VrVC1973A-SNU_v1
TypemRNA
OrganismVigna radiata (Mung bean, green gram)
Sequence length483
Productuncharacterized LOC106771596, transcript variant X1
References
External references for this mRNA
DatabaseAccession
GeneID106771596
GenbankXM_014657592.2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr08chromosomechr08:32595752..32599179 -Vigna radiata cv. VC1973A genome v6.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
asvrvL252Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anvrvL0655Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
cavrvL361Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvrvL0646Cajanus cajan Asha genome v1.0Cajanus cajan
crvrvL373Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
vfhvrvL425Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
canvrvL335Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvrvL300Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvrvL331Cicer arietinum
ccavrvL236Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vasvrvL589Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvrvL529Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
Ca_03731Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vfaba.Hedin2.R1.3g083720.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-TanjilR_15558Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-XM_004495717.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Cr_10109.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Va02G053020.2Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Cc_v2.0_04001.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
PvulFLAVERTChr07.1001193Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Vigan.08G165600.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
rna-KK1_007100Cajanus cajan Asha genome v1.0Cajanus cajan
LR48_mrnaVigan10g095100Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LOC106771596gene-LOC106771596_VrVC1973A-SNU_v1Vigna radiatagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_014657592.2-5exon-XM_014657592.2-5_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_014657592.2-4exon-XM_014657592.2-4_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_014657592.2-3exon-XM_014657592.2-3_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_014657592.2-2exon-XM_014657592.2-2_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_014657592.2-1exon-XM_014657592.2-1_VrVC1973A-SNU_v1Vigna radiataexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-XP_014513078.1cds-XP_014513078.1_VrVC1973A-SNU_v1_5Vigna radiataCDS
cds-XP_014513078.1cds-XP_014513078.1_VrVC1973A-SNU_v1_4Vigna radiataCDS
cds-XP_014513078.1cds-XP_014513078.1_VrVC1973A-SNU_v1_3Vigna radiataCDS
cds-XP_014513078.1cds-XP_014513078.1_VrVC1973A-SNU_v1_2Vigna radiataCDS
cds-XP_014513078.1cds-XP_014513078.1_VrVC1973A-SNU_v1Vigna radiataCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-XM_014657592.2_VrVC1973A-SNU_v1rna-XM_014657592.2_VrVC1973A-SNU_v1Vigna radiatapolypeptide
rna-XM_014657592.2_VrVC1973A-SNU_v1rna-XM_014657592.2_VrVC1973A-SNU_v1-proteinVigna radiatapolypeptide


Homology
[Close]
BLAST of rna-XM_014657592.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3V3Z7|A0A1S3V3Z7_VIGRR (uncharacterized protein LOC106771596 isoform X1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106771596 PE=4 SV=1)

HSP 1 Score: 332.028 bits (850), Expect = 4.623e-115
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0 
Query:    1 MAPKRRPTKKGESRMDAALDAMHIYGFSKQLVRATVKSLLKVYGGNEGWVFIEDSSYTLLIDTLLESQLNPSPPVAGLIEANSGDGPNEVTPAGCSNGALLACCKAQTSESQPAGNLALRENHGPKIPQLNHKRRRPCYGWISSDEENEDLTELIPKSPL 160
            MAPKRRPTKKGESRMDAALDAMHIYGFSKQLVRATVKSLLKVYGGNEGWVFIEDSSYTLLIDTLLESQLNPSPPVAGLIEANSGDGPNEVTPAGCSNGALLACCKAQTSESQPAGNLALRENHGPKIPQLNHKRRRPCYGWISSDEENEDLTELIPKSPL
Sbjct:    1 MAPKRRPTKKGESRMDAALDAMHIYGFSKQLVRATVKSLLKVYGGNEGWVFIEDSSYTLLIDTLLESQLNPSPPVAGLIEANSGDGPNEVTPAGCSNGALLACCKAQTSESQPAGNLALRENHGPKIPQLNHKRRRPCYGWISSDEENEDLTELIPKSPL 160
[Close]
BLAST of rna-XM_014657592.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3V4K5|A0A1S3V4K5_VIGRR (uncharacterized protein LOC106771596 isoform X2 OS=Vigna radiata var. radiata OX=3916 GN=LOC106771596 PE=4 SV=1)

HSP 1 Score: 315.079 bits (806), Expect = 2.039e-108
Identity = 154/160 (96.25%), Postives = 154/160 (96.25%), Query Frame = 0 
Query:    1 MAPKRRPTKKGESRMDAALDAMHIYGFSKQLVRATVKSLLKVYGGNEGWVFIEDSSYTLLIDTLLESQLNPSPPVAGLIEANSGDGPNEVTPAGCSNGALLACCKAQTSESQPAGNLALRENHGPKIPQLNHKRRRPCYGWISSDEENEDLTELIPKSPL 160
            MAPKRRPTKKGESRMDAALDAMHIYGFSKQLVRATV      YGGNEGWVFIEDSSYTLLIDTLLESQLNPSPPVAGLIEANSGDGPNEVTPAGCSNGALLACCKAQTSESQPAGNLALRENHGPKIPQLNHKRRRPCYGWISSDEENEDLTELIPKSPL
Sbjct:    1 MAPKRRPTKKGESRMDAALDAMHIYGFSKQLVRATV------YGGNEGWVFIEDSSYTLLIDTLLESQLNPSPPVAGLIEANSGDGPNEVTPAGCSNGALLACCKAQTSESQPAGNLALRENHGPKIPQLNHKRRRPCYGWISSDEENEDLTELIPKSPL 154
[Close]
BLAST of rna-XM_014657592.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3SQC9|A0A0S3SQC9_PHAAN (WIYLD domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.08G165600 PE=4 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.359e-69
Identity = 105/120 (87.50%), Postives = 110/120 (91.67%), Query Frame = 0 
Query:    1 MAPKRRPTKKGESRMDAALDAMHIYGFSKQLVRATVKSLLKVYGGNEGWVFIEDSSYTLLIDTLLESQLNPSPPVAGLIEANSGDGPNEVTPAGCSNGALLACCKAQTSESQPAGNLALR 120
            MAPKRRPTK GESRMDAALDAMHIYGFSK+LVR TV+SLLKVYGGNEGWVFIEDSSYTLLIDTLLESQLNPSPPV GLIEAN GDGPNEVTPAGCSNGALLACCK QTS+ +P    AL+
Sbjct:    1 MAPKRRPTKVGESRMDAALDAMHIYGFSKKLVRTTVQSLLKVYGGNEGWVFIEDSSYTLLIDTLLESQLNPSPPVVGLIEANPGDGPNEVTPAGCSNGALLACCKTQTSDDKPLTIKALQ 120

HSP 2 Score: 113.235 bits (282), Expect = 9.124e-28
Identity = 51/54 (94.44%), Postives = 52/54 (96.30%), Query Frame = 0 
Query:  107 QTSESQPAGNLALRENHGPKIPQLNHKRRRPCYGWISSDEENEDLTELIPKSPL 160
            + SESQPAGNLALRENHGPKIPQLNHKRRRPCYGWISSDEENEDLTELIPK PL
Sbjct:  187 KKSESQPAGNLALRENHGPKIPQLNHKRRRPCYGWISSDEENEDLTELIPKYPL 240
[Close]
BLAST of rna-XM_014657592.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9VK27|A0A0L9VK27_PHAAN (WIYLD domain-containing protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan10g095100 PE=4 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 4.297e-69
Identity = 105/120 (87.50%), Postives = 110/120 (91.67%), Query Frame = 0 
Query:    1 MAPKRRPTKKGESRMDAALDAMHIYGFSKQLVRATVKSLLKVYGGNEGWVFIEDSSYTLLIDTLLESQLNPSPPVAGLIEANSGDGPNEVTPAGCSNGALLACCKAQTSESQPAGNLALR 120
            MAPKRRPTK GESRMDAALDAMHIYGFSK+LVR TV+SLLKVYGGNEGWVFIEDSSYTLLIDTLLESQLNPSPPV GLIEAN GDGPNEVTPAGCSNGALLACCK QTS+ +P    AL+
Sbjct:    1 MAPKRRPTKVGESRMDAALDAMHIYGFSKKLVRTTVQSLLKVYGGNEGWVFIEDSSYTLLIDTLLESQLNPSPPVVGLIEANPGDGPNEVTPAGCSNGALLACCKTQTSDDKPLTIKALQ 120

HSP 2 Score: 112.079 bits (279), Expect = 3.295e-27
Identity = 50/52 (96.15%), Postives = 51/52 (98.08%), Query Frame = 0 
Query:  109 SESQPAGNLALRENHGPKIPQLNHKRRRPCYGWISSDEENEDLTELIPKSPL 160
            +ESQPAGNLALRENHGPKIPQLNHKRRRPCYGWISSDEENEDLTELIPK PL
Sbjct:  207 TESQPAGNLALRENHGPKIPQLNHKRRRPCYGWISSDEENEDLTELIPKYPL 258
[Close]
BLAST of rna-XM_014657592.2 vs. UniProtKB/TrEMBL
Match: tr|V7BJM9|V7BJM9_PHAVU (WIYLD domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_007G184700g PE=4 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.341e-53
Identity = 92/133 (69.17%), Postives = 104/133 (78.20%), Query Frame = 0 
Query:    1 MAPKRRPTKKGESRMDAALDAMHIYGFSKQLVRATVKSLLKVYGGNEGWVFIEDSSYTLLIDTLLESQLNPSPPVAGLIEANSGDGPNEVTPAGCSNGALLACCKAQTSESQP-----AGNLALRENHGPKIP 128
            MAPK R  KKGE R+DAALDAMH+YGF ++LVR TV SLLKVYG  +GWVFIEDSSYTLLIDTLLE+Q NPSP   GLIEAN GDGPNEVTPAGCSN ALLACCKAQTS+  P      G +++    G ++P
Sbjct:    1 MAPKGR--KKGEKRIDAALDAMHLYGFPRKLVRTTVDSLLKVYGRQDGWVFIEDSSYTLLIDTLLENQANPSPQ-DGLIEANPGDGPNEVTPAGCSNSALLACCKAQTSDDTPLADQVMGTVSVASETGSQLP 130
[Close]
BLAST of rna-XM_014657592.2 vs. UniProtKB/TrEMBL
Match: tr|V7BG45|V7BG45_PHAVU (WIYLD domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_007G184700g PE=4 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.443e-53
Identity = 92/133 (69.17%), Postives = 104/133 (78.20%), Query Frame = 0 
Query:    1 MAPKRRPTKKGESRMDAALDAMHIYGFSKQLVRATVKSLLKVYGGNEGWVFIEDSSYTLLIDTLLESQLNPSPPVAGLIEANSGDGPNEVTPAGCSNGALLACCKAQTSESQP-----AGNLALRENHGPKIP 128
            MAPK R  KKGE R+DAALDAMH+YGF ++LVR TV SLLKVYG  +GWVFIEDSSYTLLIDTLLE+Q NPSP   GLIEAN GDGPNEVTPAGCSN ALLACCKAQTS+  P      G +++    G ++P
Sbjct:    1 MAPKGR--KKGEKRIDAALDAMHLYGFPRKLVRTTVDSLLKVYGRQDGWVFIEDSSYTLLIDTLLENQANPSPQ-DGLIEANPGDGPNEVTPAGCSNSALLACCKAQTSDDTPLADQVMGTVSVASETGSQLP 130
[Close]
BLAST of rna-XM_014657592.2 vs. UniProtKB/TrEMBL
Match: tr|A0A371I038|A0A371I038_MUCPR (WIYLD domain-containing protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_07344 PE=4 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 3.110e-49
Identity = 85/121 (70.25%), Postives = 95/121 (78.51%), Query Frame = 0 
Query:    1 MAPKRRPTKKGESRMDAALDAMHIYGFSKQLVRATVKSLLK--VYGGNEGWVFIEDSSYTLLIDTLLESQLNPSPPVAGLIEANSGDGPNEVTPAGCSNGALLACCKAQTSESQPAGNLAL 119
            MAP+RR TK+G++RMDAALDAM  YGF  +LVR TV++LLK  VYGGNEGW+FIEDS YTLLIDTLLE Q NPSP V GLIEAN GDGPNEVTPAGCS+ ALLA    QTS   P  N  +
Sbjct:    1 MAPRRRSTKRGQTRMDAALDAMAPYGFPSKLVRTTVQNLLKANVYGGNEGWIFIEDSGYTLLIDTLLEKQANPSPQV-GLIEANPGDGPNEVTPAGCSSSALLAYSNTQTSNDTPLTNQGI 120
[Close]
BLAST of rna-XM_014657592.2 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6N295|A0A4D6N295_VIGUN (WIYLD domain-containing protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG9g2417 PE=4 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.582e-48
Identity = 84/122 (68.85%), Postives = 95/122 (77.87%), Query Frame = 0 
Query:    1 MAPKRRPTKKGESRMDAALDAMHIYGFSKQLVRATVKSLLKVYGGNEGWVFIEDSSYTLLIDTLLESQLNPSPPVAGLIEANSGDGPNEVTPA------GCSNGALLACCKAQTSESQPAGN 116
            MAPKRR +KKGESRMDAALDAMH YGF KQ VR TV+SLL+VYGGN+GWVFIE+SSYTLL++TLL++      P  GLIEAN GDG +EVTPA      GCSN AL ACCKAQTS+  P  N
Sbjct:    1 MAPKRRSSKKGESRMDAALDAMHPYGFDKQRVRRTVRSLLEVYGGNDGWVFIEESSYTLLVETLLKAS-----PQVGLIEANPGDGSSEVTPASEVTAVGCSNNALQACCKAQTSDDTPLTN 117

HSP 2 Score: 109.768 bits (273), Expect = 1.512e-26
Identity = 48/54 (88.89%), Postives = 51/54 (94.44%), Query Frame = 0 
Query:  107 QTSESQPAGNLALRENHGPKIPQLNHKRRRPCYGWISSDEENEDLTELIPKSPL 160
            + SE QPAGNLALRENHGP+IPQLNHKRRRPCYGWISSDEENEDL E+IPKSPL
Sbjct:  188 KKSECQPAGNLALRENHGPRIPQLNHKRRRPCYGWISSDEENEDLIEVIPKSPL 241
[Close]
BLAST of rna-XM_014657592.2 vs. UniProtKB/TrEMBL
Match: tr|K7N558|K7N558_SOYBN (WIYLD domain-containing protein OS=Glycine max OX=3847 GN=100778316 PE=4 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 8.913e-45
Identity = 83/110 (75.45%), Postives = 89/110 (80.91%), Query Frame = 0 
Query:    1 MAPKRRPTKKGESRMDAALDAMHIYGFSKQLVRATVKSLLKVYGGNEGWVFIEDSSYTLLIDTLLESQLNPSPPVAGLIEANSGDGPNEVTPAGCSNGALLACCKAQTSE 110
            MAPKRRP KKGESRMDAALDAM  YGF  +LVR TV SLLKVYGGN GW FIE+S+Y+LLI+TLLE Q N S P  GLIEAN  DGPNEVTPAGCSN ALLAC   QTS+
Sbjct:    1 MAPKRRP-KKGESRMDAALDAMKPYGFPNRLVRTTVNSLLKVYGGNGGWFFIEESAYSLLIETLLEKQAN-SSPQDGLIEANP-DGPNEVTPAGCSNSALLACSNTQTSD 107
[Close]
BLAST of rna-XM_014657592.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445F956|A0A445F956_GLYSO (WIYLD domain-containing protein OS=Glycine soja OX=3848 GN=D0Y65_054932 PE=4 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.822e-44
Identity = 83/110 (75.45%), Postives = 89/110 (80.91%), Query Frame = 0 
Query:    1 MAPKRRPTKKGESRMDAALDAMHIYGFSKQLVRATVKSLLKVYGGNEGWVFIEDSSYTLLIDTLLESQLNPSPPVAGLIEANSGDGPNEVTPAGCSNGALLACCKAQTSE 110
            MAPKRRP KKGESRMDAALDAM  YGF  +LVR TV SLLKVYGGN GW FIE+S+Y+LLI+TLLE Q N S P  GLIEAN  DGPNEVTPAGCSN ALLAC   QTS+
Sbjct:    1 MAPKRRP-KKGESRMDAALDAMKPYGFPIRLVRTTVNSLLKVYGGNGGWFFIEESAYSLLIETLLEKQAN-SSPQDGLIEANP-DGPNEVTPAGCSNSALLACSNTQTSD 107
The following BLAST results are available for this feature:
BLAST of rna-XM_014657592.2 vs.
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of rna-XM_014657592.2 vs.
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of rna-XM_014657592.2 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S3V3Z7|A0A1S3V3Z7_VIGRR4.623e-115100.00uncharacterized protein LOC106771596 isoform X1 OS... [more]
tr|A0A1S3V4K5|A0A1S3V4K5_VIGRR2.039e-10896.25uncharacterized protein LOC106771596 isoform X2 OS... [more]
tr|A0A0S3SQC9|A0A0S3SQC9_PHAAN2.359e-6987.50WIYLD domain-containing protein OS=Vigna angularis... [more]
tr|A0A0L9VK27|A0A0L9VK27_PHAAN4.297e-6987.50WIYLD domain-containing protein OS=Phaseolus angul... [more]
tr|V7BJM9|V7BJM9_PHAVU1.341e-5369.17WIYLD domain-containing protein OS=Phaseolus vulga... [more]
tr|V7BG45|V7BG45_PHAVU1.443e-5369.17WIYLD domain-containing protein OS=Phaseolus vulga... [more]
tr|A0A371I038|A0A371I038_MUCPR3.110e-4970.25WIYLD domain-containing protein (Fragment) OS=Mucu... [more]
tr|A0A4D6N295|A0A4D6N295_VIGUN2.582e-4868.85WIYLD domain-containing protein OS=Vigna unguicula... [more]
tr|K7N558|K7N558_SOYBN8.913e-4575.45WIYLD domain-containing protein OS=Glycine max OX=... [more]
tr|A0A445F956|A0A445F956_GLYSO1.822e-4475.45WIYLD domain-containing protein OS=Glycine soja OX... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0
Date Performed: 2023-06-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018848WIYLD domainPFAMPF10440WIYLDcoord: 9..68
e-value: 8.4E-23
score: 79.9
IPR043017WIYLD domain superfamilyGENE3D1.10.8.850coord: 5..69
e-value: 5.8E-19
score: 69.6
NoneNo IPR availablePANTHERPTHR34271NUCLEOLAR HISTONE METHYLTRANSFERASE-RELATED PROTEINcoord: 114..158

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-XM_014657592.2_VrVC1973A-SNU_v1 ID=rna-XM_014657592.2_VrVC1973A-SNU_v1; Name=rna-XM_014657592.2; organism=Vigna radiata; type=mRNA; length=483bp
ATGGCTCCGAAACGACGTCCCACTAAGAAAGGAGAGAGCCGAATGGACGC
GGCTCTCGACGCCATGCATATCTATGGCTTCTCCAAACAACTCGTCCGAG
CAACTGTTAAGAGCCTCCTCAAAGTTTATGGTGGCAATGAGGGCTGGGTC
TTCATCGAAGACTCCAGTTACACTCTCCTCATCGATACTCTTCTTGAAAG
CCAACTCAATCCTTCACCTCCGGTTGCTGGTTTGATAGAGGCTAATTCAG
GAGATGGTCCCAATGAGGTTACACCTGCTGGATGCTCGAACGGTGCCCTT
CTAGCATGTTGTAAAGCACAAACTTCTGAGTCTCAGCCTGCAGGAAATTT
GGCTTTGCGGGAAAATCATGGACCAAAGATTCCACAGCTTAATCACAAAA
GGCGTAGACCTTGCTATGGCTGGATTTCTAGTGATGAGGAGAACGAAGAT
CTAACAGAGCTTATACCTAAATCTCCGTTGTGA
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protein sequence of rna-XM_014657592.2_VrVC1973A-SNU_v1

>rna-XM_014657592.2_VrVC1973A-SNU_v1 ID=rna-XM_014657592.2_VrVC1973A-SNU_v1; Name=rna-XM_014657592.2_VrVC1973A-SNU_v1; organism=Vigna radiata; type=polypeptide; length=160bp
MAPKRRPTKKGESRMDAALDAMHIYGFSKQLVRATVKSLLKVYGGNEGWV
FIEDSSYTLLIDTLLESQLNPSPPVAGLIEANSGDGPNEVTPAGCSNGAL
LACCKAQTSESQPAGNLALRENHGPKIPQLNHKRRRPCYGWISSDEENED
LTELIPKSPL
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mRNA from alignment at chr08:32595752..32599179-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-XM_014657592.2_VrVC1973A-SNU_v1 ID=rna-XM_014657592.2_VrVC1973A-SNU_v1; Name=rna-XM_014657592.2; organism=Vigna radiata; type=mRNA; length=3428bp; location=Sequence derived from: chr08:32595752..32599179- (Vigna radiata
GAGTTGAAATGAGAAAAGAGTTTTCCTTTTATACCCTCTCTCTTCTCTCA
CTCCACCTGACATCACAGTGTGAACGATTCTCCAGAATTTCATTTCCCAG
AAGCTCATCTTCTGTTCGAATTCTCCATTCTCATGGCTCCGAAACGACGT
CCCACTAAGGTAGTTTCATCTTTCCCTTTCCTCTCATTTTTTCACCACAT
TAACTGAATCAGTGCTTTCGTTTTCTGTAATCGACAGAAAGGAGAGAGCC
GAATGGACGCGGCTCTCGACGCCATGCATATCTATGGCTTCTCCAAACAA
CTCGTCCGAGCAACTGTTAAGAGCCTCCTCAAAGTAACTGAGTCCCTTTT
CTTCAACCTAAATTTTTTAATTTCATTTGATTGTGATGTGAAAAATGTCT
GTTTAGGTTTATGGTGGCAATGAGGGCTGGGTCTTCATCGAAGACTCCAG
TTACACTCTCCTCATCGATACTCTTCTTGAAAGCCAACTCAATCCTTCAC
CTCCGGTAACTCTGCTTCTCTTGTTCCTTATTCTCCAAGCAACTGTGTAA
TTTCTATTTTTTTTTTCTTCTGTTTTTTATTTGCTGTTTTTGTTGTGTAG
TAATGTGTTGCTTCTATCATATAAATCCTTCATTTATGATTTATCTGGAT
GTTCTTATGTTCTGCTGTGGACTTGTTCAGGGGAAATTTAACCCACATCT
GACTTTTGGAAATTAAATTAATTGTTTTATTCTCTTTGTAGAAGAAAAAA
TGAGCATATATTAGCAGTCAGTTTTAATCTTTGACTCACTTACTTCACTC
CAAAAGATGGTACAAATACCATGGGGTTTTGGATGGAAAGTTACATTTTT
ATTTTTGCTTTTCTAAGCTTCATTCTTTTTGTTTTTTATAATAAAACTTA
ATATTTAAGTTGGTGAGTAGAGGGGAGTTTTTGGTTGATTTCATGGCTGC
TTGAAAGACTCTCATACCACTTATGGCAGCTGATATTTTAATCTCCAAGG
ACATGGCCTTTAAGTTTTTAAATCCTAAAGATTTAGCCAAATTTACTTTC
CACAGAGGATTCTGAATTTTCTTACACCAGACATATATACCAACTTCTGG
TGAAGGTAGTGGTCTAAAGTTTGTGATAAAAGATCATTCGTTGTCCTGGA
ATGATAAATTATATTTTGAGAAGTCATACATAGCTTTCAAACTTAGATAT
AAACAGCCTAACTCAATAGTTGATTGCAATTTTTTTTTCCATAACTCTCT
AGTTTCTTGGTTGTATTGTAGATTTGGGTTGTTGTATGTTTTTTGCGATC
GTGAAAGTTGCATATTGAGTGTTTGTAGATGCAGGTTATAAGATGTCAAA
CCACATCAAATTTGACTATGTGCTTTTATTTGGGAATGTTTTTGGTTGAA
AAGATTATTTCTTATTGCTTGTAACTCATCAACTGGTGTCATAGGATGCA
TCAGTTGTCCTGTAACAAAGGTTGGGTGAGTTTGGTTACAATCAAATCGT
GATGTTTGGACTATGACTCTTTTAAGTAGAAATAGTTGTATTCTGAATCA
AGTTATAACTTTTGGCTGTGGTAAGCCTTTGATTCAACAATATCAATTAT
CCCCTAAAGAAGGACATGTGACTCAAGTTATAATCAAATAATGGCACTTG
ATTTCTACTCTCTTAAGTAAGACAAAGTTGTCTTGATTATAAACTATAGG
TTTTGAAATAATGGTGATTACCTGACCCAACAACTATGTTGGATTCCTAA
TAGAGGGACTTCTAACGAACTAGAAAATTTGCTGACCTTGGCTGACACTT
TTCTATCTGAAGGGGTTATCTAAATGAATACAGTTGGTGATGGCCAACAG
GACAAGACAGATGTCAATATTGTACCATATACTCATTGCGGCCCCCATTG
ACCCTCAGCCATTTTGCAAATCTTAACCCATTTTGAATAATGGAATGGGG
AAGTTATCTGTGCATAACATACCGCTGAAAAATGAACGTCCTTTGCTCAA
AACTACTAAAAAGCAATACTGTTTGTCCTTGTCGACCCCAAGTGTCATTA
ATGTGAAGAATAGTCATGTATACAATGAAGTTCCTAGGAAAACTAATCAT
AACCCTAACTGTGCATACCCAGCCCAAATATGGTAGGCGACTCGGCCCAT
CAAGGGTCCATTGTTAAAATCTCGTCAGACGAGTCTTCCCAAATTCAGTT
CCAATATTATATCGTGAGCAGCACTGAGCTGTTGTGTCTTCAAAGTCATA
TTACTTTCCGGAGTTATTGAAACCTGAGACTCTATGAAATTACTTTGTGA
TAGTTCTTTAGATTTTCTACCTATTATTTCTTTCACCTTTTTCCCAAGGG
AAAAATTTATGCTCTGCACACACCCTTGGAAAGGCCATAGCTTGTAAGAT
GTTATTGTGTGTATATGTATTTAAATGATAAGTGTTGCCATTGAAGTTCT
CTGTGTATTAAATGTTGTATTTTTTGTTAAACGTTCTAAGTTTTTATATG
GTCACTAATGATTTTAAGACACTCATCAATAGGATTATATGTTGAAAAAC
CTCTGTTGTTCCTTCTTTATAATCCTAATGTTACTTGTAAATTAAAACCT
TTCCTTTCTTGTAAGTTCAATAGCCTCAAATAGTGGTGAATGCCTACAAT
TTTGAGACATTCACATAACAATAGTTTTAAAATTATTGAGATACGACATG
CAAGCTTCTCTTGTAATACAATGAAAACTTTTTTAAGACTTTTTGCAAGC
ATGGCCTACAGTCCTATGAAAAATTCTTGGTGGATCTTTGGTCTGATGGC
CTATATATTCTTATGAAGTTATCATTAACAATGTCTAGTTTTATGGTCTT
GTATTGTTTGTGTTAAGGTTGCTGGTTTGATAGAGGCTAATTCAGGAGAT
GGTCCCAATGAGGTTACACCTGCTGGATGCTCGAACGGTGCCCTTCTAGC
ATGTTGTAAAGCACAAACTTCTGGTTGTCAACTTCCCATTTTCGTTATTC
TTTTAATTGGCTCAGATACTAAGGTTGAAAGCATATTAAACATAATAATC
TTGTATACTTGCAGAGTCTCAGCCTGCAGGAAATTTGGCTTTGCGGGAAA
ATCATGGACCAAAGATTCCACAGCTTAATCACAAAAGGCGTAGACCTTGC
TATGGCTGGATTTCTAGTGATGAGGAGAACGAAGATCTAACAGAGCTTAT
ACCTAAATCTCCGTTGTGAAATATTGCACATGTTAGAGAAAATGGTCAAC
AAGTGTCATAAGGACAGGGGCAGGGTATTACGTATGTGTTATATTAGAGA
ACTATACAGATCTGGTTCCTGTGTATAAGTACTGTAGAACAGACCAAAAG
AGATAGGATGTTTTATTTTTATTTTTTAACAAATACATTGAGTTATAAGA
TAATGTTTTCGTTTTAACCAAATAGGAA
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Coding sequence (CDS) from alignment at chr08:32595752..32599179-

>rna-XM_014657592.2_VrVC1973A-SNU_v1 ID=rna-XM_014657592.2_VrVC1973A-SNU_v1; Name=rna-XM_014657592.2; organism=Vigna radiata; type=CDS; length=483bp; location=Sequence derived from: chr08:32595752..32599179- (Vigna radiata
ATGGCTCCGAAACGACGTCCCACTAAGAAAGGAGAGAGCCGAATGGACGC
GGCTCTCGACGCCATGCATATCTATGGCTTCTCCAAACAACTCGTCCGAG
CAACTGTTAAGAGCCTCCTCAAAGTTTATGGTGGCAATGAGGGCTGGGTC
TTCATCGAAGACTCCAGTTACACTCTCCTCATCGATACTCTTCTTGAAAG
CCAACTCAATCCTTCACCTCCGGTTGCTGGTTTGATAGAGGCTAATTCAG
GAGATGGTCCCAATGAGGTTACACCTGCTGGATGCTCGAACGGTGCCCTT
CTAGCATGTTGTAAAGCACAAACTTCTGAGTCTCAGCCTGCAGGAAATTT
GGCTTTGCGGGAAAATCATGGACCAAAGATTCCACAGCTTAATCACAAAA
GGCGTAGACCTTGCTATGGCTGGATTTCTAGTGATGAGGAGAACGAAGAT
CTAACAGAGCTTATACCTAAATCTCCGTTGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR018848WIYLD_domain
IPR043017WIYLD_dom_sf