rna-XM_014663004.2
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Transcript Overview
References
External references for this mRNA
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of rna-XM_014663004.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9XFB0|YAB2_ARATH (Putative axial regulator YABBY 2 OS=Arabidopsis thaliana OX=3702 GN=YAB2 PE=1 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 1.107e-79 Identity = 122/188 (64.89%), Postives = 146/188 (77.66%), Query Frame = 0
Query: 1 MSMEMMATERVCYVHCNFCNTILAVSVPYNSLLTIVTVRCGHCANLLSVNMGASLQ--PFPP--QD--PQKQHISFEEPSSKELGSSSSKCNKIAPFEAVEHEPPRIPPIRPTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHFGLKLDGNSQGK-LEQGEGGEKTNGFY 181
MS++ ++ERVCYVHC+FC TILAVSVPY SL T+VTVRCGHC NLLS+N+G SL PP QD P +QH + + K+ SSS N ++ E ++ E PR+PPIRP EKR RVPSAYNRFIKEEIQRIKA NP+ISHREAFS+AAKNWAHFPHIHFGLKLDGN +GK L+Q G+K+NG+Y
Sbjct: 1 MSVDF-SSERVCYVHCSFCTTILAVSVPYASLFTLVTVRCGHCTNLLSLNIGVSLHQTSAPPIHQDLQPHRQHTT-SLVTRKDCASSSRSTNNLS--ENIDREAPRMPPIRPPEKRQRVPSAYNRFIKEEIQRIKACNPEISHREAFSTAAKNWAHFPHIHFGLKLDGNKKGKQLDQSVAGQKSNGYY 184
BLAST of rna-XM_014663004.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q8GW46|YAB5_ARATH (Axial regulator YABBY 5 OS=Arabidopsis thaliana OX=3702 GN=YAB5 PE=1 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 1.701e-62 Identity = 101/168 (60.12%), Postives = 118/168 (70.24%), Query Frame = 0
Query: 1 MSMEMMATERVCYVHCNFCNTILAVSVPYNSLLTIVTVRCGHCANLLSVNMGASLQPFPPQDPQKQHISFEEPSSKELGSSSSKCNKIAPFEAVEHEPPRIPPIRPTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHFGLKLDGNSQGKL 168
M+ +MATE++CY+ CNFCN ILAV+VP +SL IVTVRCGHC NL SVNM A+LQ P Q ++ P E GSSS KI + + RP EKR RVPSAYN+FIKEEIQRIKA+NPDISHREAFS+AAKNWAHFPHIHFGL L+ N Q K+
Sbjct: 1 MANSVMATEQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAALQSL--SRPNFQATNYAVP---EYGSSSRSHTKIPSRISTRTITEQRIVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLESNKQAKI 163
BLAST of rna-XM_014663004.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q10FZ7|YAB2_ORYSJ (Protein YABBY 2 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB2 PE=2 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 6.592e-60 Identity = 100/178 (56.18%), Postives = 126/178 (70.79%), Query Frame = 0
Query: 1 MSMEMM-ATERVCYVHCNFCNTILAVSVPYNSLLTIVTVRCGHCANLLSVNMGASLQPFPPQDPQKQHISFEEPSSKELGS---SSSKCNKIAPFEAVEHEPPRIPPIRPTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHFGLKLDGNSQGKLEQGEGG 174
MS +++ A E VCYVHCNFCNTI AVSVP NS+L IVTVRCGHC +LLSVN+ +Q P +D + ++ S +E S SSS+ ++ P +++ + +RP EKR RVPSAYNRFIKEEI+RIKA+NPDISHREAFS+AAKNWAHFP+IHFGL S KL++ G
Sbjct: 1 MSAQIVPAPEHVCYVHCNFCNTIFAVSVPSNSMLNIVTVRCGHCTSLLSVNLRGLVQALPAEDHLQDNLKMHNMSFRENYSEYGSSSRYGRV-PMMFSKNDTEHMLHVRPPEKRQRVPSAYNRFIKEEIRRIKANNPDISHREAFSTAAKNWAHFPNIHFGLG-SHESSKKLDEAIGA 176
BLAST of rna-XM_014663004.2 vs. UniProtKB/Swiss-Prot
Match: sp|O22152|YAB1_ARATH (Axial regulator YABBY 1 OS=Arabidopsis thaliana OX=3702 GN=YAB1 PE=1 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 9.473e-56 Identity = 102/196 (52.04%), Postives = 120/196 (61.22%), Query Frame = 0
Query: 8 TERVCYVHCNFCNTILAVSVPYNSLLTIVTVRCGHCANLLSVNMGASLQP--------------FPPQDPQKQHISFEEPSSKELGSSSSKCNKIAPFEAV--EHEPPRIPPI-RPTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHFGLKLDGNSQGK--LEQGEGGEKT---NGFY 181
++ +CYV CNFC TILAV+VPY SL VTVRCG C NLLSVNM + + P F PQD ++ + + + N I F + +HE P+ PP+ RP EKR RVPSAYNRFIKEEIQRIKA NPDISHREAFS+AAKNWAHFPHIHFGL D K + Q EG + GFY
Sbjct: 22 SDHLCYVQCNFCQTILAVNVPYTSLFKTVTVRCGCCTNLLSVNMRSYVLPASNQLQLQLGPHSYFNPQDILEELRDAPSNMNMMMMNQHPTMNDIPSFMDLHQQHEIPKAPPVNRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLVPDNQPVKKTNMPQQEGEDNMVMKEGFY 217
BLAST of rna-XM_014663004.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q2QM17|YAB6_ORYSJ (Protein YABBY 6 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB6 PE=2 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 2.606e-53 Identity = 103/209 (49.28%), Postives = 121/209 (57.89%), Query Frame = 0
Query: 1 MSMEMMATERVCYVHCNFCNTILAVSVPYNSLLTIVTVRCGHCANLLSVNMGASLQPFPP-QDPQKQHISFEEPSSKELGSSSSKCNKIAPFEAVEHEPPRIPPI--------------------RPTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHFGLKLDGNSQGK-------LEQGEGGEKTNGFY 181
MS ++ E+VCYVHCNFCNTILAVSVP NS+L IVTVRCGHC NLLSVN+ + P QD H+ +E S + A R+PP RP EKR RVPSAYNRFIKEEI+RIKA+NPDISHREAFS+AAKNWAH+P+IHFGL G+ GK + +K GFY
Sbjct: 1 MSAQIAPAEQVCYVHCNFCNTILAVSVPGNSMLNIVTVRCGHCTNLLSVNLRGLMHSAPALQDHHHHHL--QESGLSGCFRDQSGYPEFGFSAASSSSKLRLPPAAAAMVSYSQQNQQLEQALHARPPEKRQRVPSAYNRFIKEEIRRIKANNPDISHREAFSTAAKNWAHYPNIHFGLS-PGHEGGKKLVDVDPIPTAPSSKKIQGFY 206
BLAST of rna-XM_014663004.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q0JBF0|YAB5_ORYSJ (Protein YABBY 5 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB5 PE=2 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 4.598e-52 Identity = 102/206 (49.51%), Postives = 120/206 (58.25%), Query Frame = 0
Query: 9 ERVCYVHCNFCNTILAVSVPYNSLLTIVTVRCGHCANLLSVNM------------------GASLQPFPPQDPQKQHISFEEPSSKELGSSS----------SKCNKIAPF--------EAVEHEP--PRIPPI--RPTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHFGLKLDGNSQGKLEQGEGG 174
E++CYVHCNFC+TILAV VP +SL VTVRCGHCANLLSVN+ A L P P + SF+ P+S +S S C AP +A + EP P+ P R +EKR RVPSAYNRFIK+EIQRIKASNPDI+HREAFS+AAKNWAHFPHIHFGL D + Q + G
Sbjct: 29 EQLCYVHCNFCDTILAVGVPCSSLFKTVTVRCGHCANLLSVNLRGLLLPAAASTANQLPFGQALLSPTSPHGLLDEVPSFQAPASLMTEQASPNVSSITSSNSSCANNAPATSMASAANKATQREPQQPKNAPSANRTSEKRQRVPSAYNRFIKDEIQRIKASNPDITHREAFSAAAKNWAHFPHIHFGLMPDQGLKKTGIQSQDG 234
BLAST of rna-XM_014663004.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q01JG2|YAB5_ORYSI (Protein YABBY 5 OS=Oryza sativa subsp. indica OX=39946 GN=YAB5 PE=3 SV=2) HSP 1 Score: 170.629 bits (431), Expect = 4.598e-52 Identity = 102/206 (49.51%), Postives = 120/206 (58.25%), Query Frame = 0
Query: 9 ERVCYVHCNFCNTILAVSVPYNSLLTIVTVRCGHCANLLSVNM------------------GASLQPFPPQDPQKQHISFEEPSSKELGSSS----------SKCNKIAPF--------EAVEHEP--PRIPPI--RPTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHFGLKLDGNSQGKLEQGEGG 174
E++CYVHCNFC+TILAV VP +SL VTVRCGHCANLLSVN+ A L P P + SF+ P+S +S S C AP +A + EP P+ P R +EKR RVPSAYNRFIK+EIQRIKASNPDI+HREAFS+AAKNWAHFPHIHFGL D + Q + G
Sbjct: 29 EQLCYVHCNFCDTILAVGVPCSSLFKTVTVRCGHCANLLSVNLRGLLLPAAASTANQLPFGQALLSPTSPHGLLDEVPSFQAPASLMTEQASPNVSSITSSNSSCANNAPATSMASAANKATQREPQQPKNAPSANRTSEKRQRVPSAYNRFIKDEIQRIKASNPDITHREAFSAAAKNWAHFPHIHFGLMPDQGLKKTGIQSQDG 234
BLAST of rna-XM_014663004.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q6H668|YAB4_ORYSJ (Protein YABBY 4 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB4 PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 6.640e-52 Identity = 102/210 (48.57%), Postives = 123/210 (58.57%), Query Frame = 0
Query: 8 TERVCYVHCNFCNTILAVSVPYNSLLTIVTVRCGHCANLLSVNM------------------GASLQPFPPQDPQK--QHISFEEPS-------SKELG----------SSSSKCNKIAPFEAVEHEP--PRIPPI---RPTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHFGLKLDGNSQGKLEQGEGGE 175
TE++CYVHCN C+TILAV VP +SL VTVRCGHCANLLSVN+ G SL P P ++F+ PS S L +S++ ++ P + V+ EP P+ P RP EKR RVPSAYNRFIK+EIQRIKA NPDISHREAFS+AAKNWAHFPHIHFGL D + + +G E
Sbjct: 22 TEQLCYVHCNCCDTILAVGVPCSSLFKTVTVRCGHCANLLSVNLRGLLLPAPAPAPANQLHFGPSL--LSPTSPHGLLDEVAFQTPSLLMEQAASASLSSITGRSSSSCASNAPAMQMPPAKPVQQEPELPKNAPASANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDQGFKKTFKPQDGSE 229
BLAST of rna-XM_014663004.2 vs. UniProtKB/Swiss-Prot
Match: sp|A2X7Q3|YAB4_ORYSI (Protein YABBY 4 OS=Oryza sativa subsp. indica OX=39946 GN=YAB4 PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 6.640e-52 Identity = 102/210 (48.57%), Postives = 123/210 (58.57%), Query Frame = 0
Query: 8 TERVCYVHCNFCNTILAVSVPYNSLLTIVTVRCGHCANLLSVNM------------------GASLQPFPPQDPQK--QHISFEEPS-------SKELG----------SSSSKCNKIAPFEAVEHEP--PRIPPI---RPTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHFGLKLDGNSQGKLEQGEGGE 175
TE++CYVHCN C+TILAV VP +SL VTVRCGHCANLLSVN+ G SL P P ++F+ PS S L +S++ ++ P + V+ EP P+ P RP EKR RVPSAYNRFIK+EIQRIKA NPDISHREAFS+AAKNWAHFPHIHFGL D + + +G E
Sbjct: 22 TEQLCYVHCNCCDTILAVGVPCSSLFKTVTVRCGHCANLLSVNLRGLLLPAPAPAPANQLHFGPSL--LSPTSPHGLLDEVAFQTPSLLMEQAASASLSSITGRSSSSCASNAPAMQMPPAKPVQQEPELPKNAPASANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDQGFKKTFKPQDGSE 229
BLAST of rna-XM_014663004.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q7XIM7|YAB1_ORYSJ (Protein YABBY 1 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB1 PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 5.486e-51 Identity = 84/160 (52.50%), Postives = 105/160 (65.62%), Query Frame = 0
Query: 1 MSMEMMATERVCYVHCNFCNTILAVSVPYNSLLTIVTVRCGHCANLLSVNMGASLQPFPPQDPQKQHISFEEPSSKELGSSSSKCNKIAPFEAVEHEPPRIPPIRPTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHFGLKL 160
MS++ +E VCYV+CN+CNTIL V+VP N IVTVRCGHC +LS+++ Q QD Q Q+ F+ + +S + ++ PIRP EKR RVPSAYNRFIKEEIQRIK SNP+ISHREAFS+AAKNWAH P +HFGL +
Sbjct: 1 MSVQF-TSEHVCYVNCNYCNTILVVNVPNNCSYNIVTVRCGHCTMVLSMDLAPFHQARTVQDHQVQNRGFQGNNFGSYDIASRNQRTSTAMYPMPTSQQQVSPIRPPEKRQRVPSAYNRFIKEEIQRIKTSNPEISHREAFSAAAKNWAHLPRLHFGLSV 159
BLAST of rna-XM_014663004.2 vs. Araport11
Match: AT1G08465.1 (| Plant-specific transcription factor YABBY family protein | Chr1:2676033-2679382 FORWARD LENGTH=184 | 201606) HSP 1 Score: 237.654 bits (605), Expect = 1.133e-80 Identity = 122/188 (64.89%), Postives = 146/188 (77.66%), Query Frame = 0
Query: 1 MSMEMMATERVCYVHCNFCNTILAVSVPYNSLLTIVTVRCGHCANLLSVNMGASLQ--PFPP--QD--PQKQHISFEEPSSKELGSSSSKCNKIAPFEAVEHEPPRIPPIRPTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHFGLKLDGNSQGK-LEQGEGGEKTNGFY 181
MS++ ++ERVCYVHC+FC TILAVSVPY SL T+VTVRCGHC NLLS+N+G SL PP QD P +QH + + K+ SSS N ++ E ++ E PR+PPIRP EKR RVPSAYNRFIKEEIQRIKA NP+ISHREAFS+AAKNWAHFPHIHFGLKLDGN +GK L+Q G+K+NG+Y
Sbjct: 1 MSVDF-SSERVCYVHCSFCTTILAVSVPYASLFTLVTVRCGHCTNLLSLNIGVSLHQTSAPPIHQDLQPHRQHTT-SLVTRKDCASSSRSTNNLS--ENIDREAPRMPPIRPPEKRQRVPSAYNRFIKEEIQRIKACNPEISHREAFSTAAKNWAHFPHIHFGLKLDGNKKGKQLDQSVAGQKSNGYY 184
BLAST of rna-XM_014663004.2 vs. Araport11
Match: AT2G26580.2 (| plant-specific transcription factor YABBY family protein | Chr2:11303923-11306739 REVERSE LENGTH=164 | 201606) HSP 1 Score: 193.741 bits (491), Expect = 1.740e-63 Identity = 101/168 (60.12%), Postives = 118/168 (70.24%), Query Frame = 0
Query: 1 MSMEMMATERVCYVHCNFCNTILAVSVPYNSLLTIVTVRCGHCANLLSVNMGASLQPFPPQDPQKQHISFEEPSSKELGSSSSKCNKIAPFEAVEHEPPRIPPIRPTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHFGLKLDGNSQGKL 168
M+ +MATE++CY+ CNFCN ILAV+VP +SL IVTVRCGHC NL SVNM A+LQ P Q ++ P E GSSS KI + + RP EKR RVPSAYN+FIKEEIQRIKA+NPDISHREAFS+AAKNWAHFPHIHFGL L+ N Q K+
Sbjct: 1 MANSVMATEQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAALQSL--SRPNFQATNYAVP---EYGSSSRSHTKIPSRISTRTITEQRIVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLESNKQAKI 163
BLAST of rna-XM_014663004.2 vs. Araport11
Match: AT2G26580.1 (| plant-specific transcription factor YABBY family protein | Chr2:11303923-11306739 REVERSE LENGTH=164 | 201606) HSP 1 Score: 193.741 bits (491), Expect = 1.740e-63 Identity = 101/168 (60.12%), Postives = 118/168 (70.24%), Query Frame = 0
Query: 1 MSMEMMATERVCYVHCNFCNTILAVSVPYNSLLTIVTVRCGHCANLLSVNMGASLQPFPPQDPQKQHISFEEPSSKELGSSSSKCNKIAPFEAVEHEPPRIPPIRPTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHFGLKLDGNSQGKL 168
M+ +MATE++CY+ CNFCN ILAV+VP +SL IVTVRCGHC NL SVNM A+LQ P Q ++ P E GSSS KI + + RP EKR RVPSAYN+FIKEEIQRIKA+NPDISHREAFS+AAKNWAHFPHIHFGL L+ N Q K+
Sbjct: 1 MANSVMATEQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAALQSL--SRPNFQATNYAVP---EYGSSSRSHTKIPSRISTRTITEQRIVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLESNKQAKI 163
BLAST of rna-XM_014663004.2 vs. Araport11
Match: AT2G45190.1 (| Plant-specific transcription factor YABBY family protein | Chr2:18628450-18630552 REVERSE LENGTH=229 | 201606) HSP 1 Score: 178.718 bits (452), Expect = 9.692e-57 Identity = 102/196 (52.04%), Postives = 120/196 (61.22%), Query Frame = 0
Query: 8 TERVCYVHCNFCNTILAVSVPYNSLLTIVTVRCGHCANLLSVNMGASLQP--------------FPPQDPQKQHISFEEPSSKELGSSSSKCNKIAPFEAV--EHEPPRIPPI-RPTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHFGLKLDGNSQGK--LEQGEGGEKT---NGFY 181
++ +CYV CNFC TILAV+VPY SL VTVRCG C NLLSVNM + + P F PQD ++ + + + N I F + +HE P+ PP+ RP EKR RVPSAYNRFIKEEIQRIKA NPDISHREAFS+AAKNWAHFPHIHFGL D K + Q EG + GFY
Sbjct: 22 SDHLCYVQCNFCQTILAVNVPYTSLFKTVTVRCGCCTNLLSVNMRSYVLPASNQLQLQLGPHSYFNPQDILEELRDAPSNMNMMMMNQHPTMNDIPSFMDLHQQHEIPKAPPVNRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLVPDNQPVKKTNMPQQEGEDNMVMKEGFY 217
BLAST of rna-XM_014663004.2 vs. Araport11
Match: AT4G00180.1 (| Plant-specific transcription factor YABBY family protein | Chr4:72804-75089 REVERSE LENGTH=240 | 201606) HSP 1 Score: 155.992 bits (393), Expect = 1.214e-47 Identity = 102/212 (48.11%), Postives = 119/212 (56.13%), Query Frame = 0
Query: 7 ATERVCYVHCNFCNTILAVSVPYNSLLTIVTVRCGHCANLLSV--NMGASLQP---------FPPQDPQKQHISFEEPSSKELGSSSSKCNKIAPFEAVEHEPPR--IPPIR-------------------PTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHFGLKLDG--NSQGKLEQGEGGEKT---NGFY 181
+T+++CYVHC+FC+T+LAVSVP +SL VTVRCGHC+NLLSV +M A L P PP P EE S G + N + A H P + R P EKR RVPSAYNRFIKEEIQRIKA NPDISHREAFS+AAKNWAHFPHIHFGL D + + Q EG + GFY
Sbjct: 21 STDQLCYVHCSFCDTVLAVSVPPSSLFKTVTVRCGHCSNLLSVTVSMRALLLPSVSNLGHSFLPPPPPPPPPNLLEEMRS---GGQNINMNMMMSHHASAHHPNEHLVMATRNGRSVDHLQEMPRPPPANRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMADHPPTKKANVRQQEGEDGMMGREGFY 229
BLAST of rna-XM_014663004.2 vs. Araport11
Match: AT4G00180.2 (| Plant-specific transcription factor YABBY family protein | Chr4:72804-74888 REVERSE LENGTH=209 | 201606) HSP 1 Score: 128.257 bits (321), Expect = 2.841e-37 Identity = 92/201 (45.77%), Postives = 103/201 (51.24%), Query Frame = 0
Query: 18 FCNTILAVSVPYNSLLTIVTVRCGHCANLLSV--NMGASLQP---------FPPQDPQKQHISFEEPSSKELGSSSSKCNKIAPFEAVEHEPPR--IPPIR-------------------PTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHFGLKLDG--NSQGKLEQGEGGEKT---NGFY 181
C+ VSVP +SL VTVRCGHC+NLLSV +M A L P PP P EE S G + N + A H P + R P EKR RVPSAYNRFIKEEIQRIKA NPDISHREAFS+AAKNWAHFPHIHFGL D + + Q EG + GFY
Sbjct: 1 MCDINWQVSVPPSSLFKTVTVRCGHCSNLLSVTVSMRALLLPSVSNLGHSFLPPPPPPPPPNLLEEMRS---GGQNINMNMMMSHHASAHHPNEHLVMATRNGRSVDHLQEMPRPPPANRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMADHPPTKKANVRQQEGEDGMMGREGFY 198
BLAST of rna-XM_014663004.2 vs. Araport11
Match: AT1G23420.1 (| Plant-specific transcription factor YABBY family protein | Chr1:8317423-8319104 FORWARD LENGTH=231 | 201606) HSP 1 Score: 129.028 bits (323), Expect = 2.869e-37 Identity = 73/164 (44.51%), Postives = 98/164 (59.76%), Query Frame = 0
Query: 10 RVCYVHCNFCNTILAVSVPYNSLLTIVTVRCGHCANLLSVN-MGASLQPFPPQDPQKQHISFEEPSSKELGSSSS------KCNK---------IAPFEAVEHEPPRIPPI--RPTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIH 155
++C+V C FC TIL VSVP+ SL +VTVRCGHC +LLSVN M AS F P +E +E+ ++ K N+ ++ + + + R+ + +P EKR R PSAYN FIKEEI+R+KA NP ++H+EAFS AAKNWAHFP H
Sbjct: 20 QICHVQCGFCTTILLVSVPFTSLSMVVTVRCGHCTSLLSVNLMKAS---FIPLHLLASLSHLDETGKEEVAATDGVEEEAWKVNQEKENSPTTLVSSSDNEDEDVSRVYQVVNKPPEKRQRAPSAYNCFIKEEIRRLKAQNPSMAHKEAFSLAAKNWAHFPPAH 180
BLAST of rna-XM_014663004.2 vs. Araport11
Match: AT1G23420.2 (| Plant-specific transcription factor YABBY family protein | Chr1:8317330-8319104 FORWARD LENGTH=262 | 201606) HSP 1 Score: 128.257 bits (321), Expect = 9.895e-37 Identity = 70/163 (42.94%), Postives = 97/163 (59.51%), Query Frame = 0
Query: 10 RVCYVHCNFCNTILAVSVPYNSLLTIVTVRCGHCANLLSVNMGASLQPFPPQDPQKQHISFEEPSSKELGSSSS------KCNK---------IAPFEAVEHEPPRIPPI--RPTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIH 155
++C+V C FC TIL VSVP+ SL +VTVRCGHC +LLSVN+ + F P +E +E+ ++ K N+ ++ + + + R+ + +P EKR R PSAYN FIKEEI+R+KA NP ++H+EAFS AAKNWAHFP H
Sbjct: 51 QICHVQCGFCTTILLVSVPFTSLSMVVTVRCGHCTSLLSVNLMKA--SFIPLHLLASLSHLDETGKEEVAATDGVEEEAWKVNQEKENSPTTLVSSSDNEDEDVSRVYQVVNKPPEKRQRAPSAYNCFIKEEIRRLKAQNPSMAHKEAFSLAAKNWAHFPPAH 211
BLAST of rna-XM_014663004.2 vs. Araport11
Match: AT2G45190.2 (| Plant-specific transcription factor YABBY family protein | Chr2:18628450-18630239 REVERSE LENGTH=165 | 201606) HSP 1 Score: 121.324 bits (303), Expect = 4.665e-35 Identity = 63/93 (67.74%), Postives = 69/93 (74.19%), Query Frame = 0
Query: 95 EHEPPRIPPI-RPTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHFGLKLDGNSQGK--LEQGEGGEKT---NGFY 181
+HE P+ PP+ RP EKR RVPSAYNRFIKEEIQRIKA NPDISHREAFS+AAKNWAHFPHIHFGL D K + Q EG + GFY
Sbjct: 61 QHEIPKAPPVNRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLVPDNQPVKKTNMPQQEGEDNMVMKEGFY 153
BLAST of rna-XM_014663004.2 vs. Araport11
Match: AT1G69180.1 (| Plant-specific transcription factor YABBY family protein | Chr1:26007734-26008940 REVERSE LENGTH=181 | 201606) HSP 1 Score: 113.235 bits (282), Expect = 9.323e-32 Identity = 63/147 (42.86%), Postives = 86/147 (58.50%), Query Frame = 0
Query: 9 ERVCYVHCNFCNTILAVSVPYNSLLTIVTVRCGHCANLLSVNMGASLQPFPPQDPQKQHISFEEPSSKELGSSSSKCNKIAPFEAVEHEPPRIPP----IRPTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHF 151
E + YV C+ CNTILAV +P +L VTV+CGHC NL + LQ H+S GS K + + + + P P ++P EK+ R+PSAYNRF+++EIQRIK++NP+I HREAFS+AAKNWA +
Sbjct: 19 EHLYYVRCSICNTILAVGIPLKRMLDTVTVKCGHCGNLSFLTTTPPLQ---------GHVSLTLQMQSFGGSDYKKGSSSSSSSSTSSDQPPSPSPPFVVKPPEKKQRLPSAYNRFMRDEIQRIKSANPEIPHREAFSAAAKNWAKY 156
BLAST of rna-XM_014663004.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3VJN0|A0A1S3VJN0_VIGRR (putative axial regulator YABBY 2 isoform X4 OS=Vigna radiata var. radiata OX=3916 GN=LOC106775796 PE=3 SV=1) HSP 1 Score: 379.022 bits (972), Expect = 5.066e-133 Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0
Query: 1 MSMEMMATERVCYVHCNFCNTILAVSVPYNSLLTIVTVRCGHCANLLSVNMGASLQPFPPQDPQKQHISFEEPSSKELGSSSSKCNKIAPFEAVEHEPPRIPPIRPTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHFGLKLDGNSQGKLEQGEGGEKTNGFY 181
MSMEMMATERVCYVHCNFCNTILAVSVPYNSLLTIVTVRCGHCANLLSVNMGASLQPFPPQDPQKQHISFEEPSSKELGSSSSKCNKIAPFEAVEHEPPRIPPIRPTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHFGLKLDGNSQGKLEQGEGGEKTNGFY
Sbjct: 1 MSMEMMATERVCYVHCNFCNTILAVSVPYNSLLTIVTVRCGHCANLLSVNMGASLQPFPPQDPQKQHISFEEPSSKELGSSSSKCNKIAPFEAVEHEPPRIPPIRPTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHFGLKLDGNSQGKLEQGEGGEKTNGFY 181
BLAST of rna-XM_014663004.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3VJE1|A0A1S3VJE1_VIGRR (putative axial regulator YABBY 2 isoform X3 OS=Vigna radiata var. radiata OX=3916 GN=LOC106775796 PE=3 SV=1) HSP 1 Score: 374.4 bits (960), Expect = 4.017e-131 Identity = 181/183 (98.91%), Postives = 181/183 (98.91%), Query Frame = 0
Query: 1 MSMEMMATERVCYVHCNFCNTILAVSVPYNSLLTIVTVRCGHCANLLSVNMGASLQPFPPQDPQ--KQHISFEEPSSKELGSSSSKCNKIAPFEAVEHEPPRIPPIRPTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHFGLKLDGNSQGKLEQGEGGEKTNGFY 181
MSMEMMATERVCYVHCNFCNTILAVSVPYNSLLTIVTVRCGHCANLLSVNMGASLQPFPPQDPQ KQHISFEEPSSKELGSSSSKCNKIAPFEAVEHEPPRIPPIRPTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHFGLKLDGNSQGKLEQGEGGEKTNGFY
Sbjct: 1 MSMEMMATERVCYVHCNFCNTILAVSVPYNSLLTIVTVRCGHCANLLSVNMGASLQPFPPQDPQSQKQHISFEEPSSKELGSSSSKCNKIAPFEAVEHEPPRIPPIRPTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHFGLKLDGNSQGKLEQGEGGEKTNGFY 183
BLAST of rna-XM_014663004.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3SC14|A0A0S3SC14_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.06G155400 PE=3 SV=1) HSP 1 Score: 370.933 bits (951), Expect = 1.001e-129 Identity = 179/183 (97.81%), Postives = 180/183 (98.36%), Query Frame = 0
Query: 1 MSMEMMATERVCYVHCNFCNTILAVSVPYNSLLTIVTVRCGHCANLLSVNMGASLQPFPPQDPQ--KQHISFEEPSSKELGSSSSKCNKIAPFEAVEHEPPRIPPIRPTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHFGLKLDGNSQGKLEQGEGGEKTNGFY 181
MSMEMMATERVCYVHCNFCNTILAVSVPYNSLLTIVTVRCGHCANLLSVNMGASLQPFPPQDPQ KQH+SFEEPSSKELGSSSSKCNKIAPFEAVEHE PRIPPIRPTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHFGLKLDGNSQGKLEQGEGGEKTNGFY
Sbjct: 1 MSMEMMATERVCYVHCNFCNTILAVSVPYNSLLTIVTVRCGHCANLLSVNMGASLQPFPPQDPQSQKQHLSFEEPSSKELGSSSSKCNKIAPFEAVEHEQPRIPPIRPTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHFGLKLDGNSQGKLEQGEGGEKTNGFY 183
BLAST of rna-XM_014663004.2 vs. UniProtKB/TrEMBL
Match: tr|A0A371GDM5|A0A371GDM5_MUCPR (Putative axial regulator YABBY 2 OS=Mucuna pruriens OX=157652 GN=YAB2 PE=3 SV=1) HSP 1 Score: 357.836 bits (917), Expect = 1.409e-124 Identity = 170/181 (93.92%), Postives = 176/181 (97.24%), Query Frame = 0
Query: 1 MSMEMMATERVCYVHCNFCNTILAVSVPYNSLLTIVTVRCGHCANLLSVNMGASLQPFPPQDPQKQHISFEEPSSKELGSSSSKCNKIAPFEAVEHEPPRIPPIRPTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHFGLKLDGNSQGKLEQGEGGEKTNGFY 181
MSMEMMATERVCYVHCNFCNTILAVSVPY+SLLT+VTVRCGHCANLLSVNMGASLQ FPPQDPQKQH+SF EPSSKELGSSS KCNK+APFEAVEHE PRIPPIRPTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHFGLKLDGN QGKL+QGEGGEK+NGFY
Sbjct: 1 MSMEMMATERVCYVHCNFCNTILAVSVPYSSLLTLVTVRCGHCANLLSVNMGASLQAFPPQDPQKQHLSFAEPSSKELGSSS-KCNKLAPFEAVEHEQPRIPPIRPTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHFGLKLDGNKQGKLDQGEGGEKSNGFY 180
BLAST of rna-XM_014663004.2 vs. UniProtKB/TrEMBL
Match: tr|C6T058|C6T058_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100500091 PE=2 SV=1) HSP 1 Score: 347.821 bits (891), Expect = 1.051e-120 Identity = 169/184 (91.85%), Postives = 175/184 (95.11%), Query Frame = 0
Query: 1 MSMEMMATERVCYVHCNFCNTILAVSVPYNSLLTIVTVRCGHCANLLSVNMGASLQPFPPQDPQKQHISFEEPSSKELGSSSSKCNKIAPFEAVEHEPPRIPPIRPTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHFG---LKLDGNSQGKLEQGEGGEKTNGFY 181
MSMEMMATERVCYVHCNFCNTILAVSVPY+SLLTIVTVRCGHCANLLSVNMGASLQ FPPQDPQKQH+SF+EPSSKELG SSSKC+KIAPFEAVEHE PRIPPIRPTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHFG LKLDGN Q KL+QGEG EK+NGFY
Sbjct: 1 MSMEMMATERVCYVHCNFCNTILAVSVPYSSLLTIVTVRCGHCANLLSVNMGASLQAFPPQDPQKQHLSFQEPSSKELG-SSSKCSKIAPFEAVEHELPRIPPIRPTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHFGLKNLKLDGNKQEKLDQGEGAEKSNGFY 183
BLAST of rna-XM_014663004.2 vs. UniProtKB/TrEMBL
Match: tr|A0A151RB10|A0A151RB10_CAJCA (Putative axial regulator YABBY 2 OS=Cajanus cajan OX=3821 GN=KK1_038972 PE=3 SV=1) HSP 1 Score: 346.665 bits (888), Expect = 3.911e-120 Identity = 169/183 (92.35%), Postives = 175/183 (95.63%), Query Frame = 0
Query: 1 MSMEMMATERVCYVHCNFCNTILAVSVPYNSLLTIVTVRCGHCANLLSVNMGASLQPFPPQDPQKQHISFEEPSSKELGSSSSKCNKIAPFEAVEHEPPRIPPIRPTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHF-GLKLDGNS-QGKLEQGEGGEKTNGFY 181
MSMEMMATERVCYVHCNFCNTILAVSVPY+S+LTIVTVRCGHCANLLSVNMGASLQ FPPQDPQKQH+SFEEPSSKELG SSSKCNKIAPFEAVEHE PRIPPIRPTEKRHRVPSAYNRFIKEEIQRIK SNPDISHREAFSSAAKNWAHFPHIHF GLKLDGN+ Q KL+QGEG EK+NGFY
Sbjct: 1 MSMEMMATERVCYVHCNFCNTILAVSVPYSSMLTIVTVRCGHCANLLSVNMGASLQAFPPQDPQKQHLSFEEPSSKELG-SSSKCNKIAPFEAVEHEQPRIPPIRPTEKRHRVPSAYNRFIKEEIQRIKVSNPDISHREAFSSAAKNWAHFPHIHFAGLKLDGNNKQAKLDQGEGAEKSNGFY 182
BLAST of rna-XM_014663004.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0R0JUJ0|A0A0R0JUJ0_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_06G308900 PE=3 SV=1) HSP 1 Score: 343.969 bits (881), Expect = 4.315e-119 Identity = 171/186 (91.94%), Postives = 175/186 (94.09%), Query Frame = 0
Query: 1 MSMEMMATERVCYVHCNFCNTILAVSVPYNSLLTIVTVRCGHCANLLSVNMGASLQPFPPQDPQKQHISFEEPSS-KELGSSSSKCNKIAPF-EAVEHEPPRIPPIRPTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHFG---LKLDGNSQGKLEQGEGGEKTNGFY 181
MSMEMMATERVCYVHCNFCNTILAVSVPY+SLLTIVTVRCGHCANLLSVNMGASLQ FPPQDPQKQ +SFEEPSS KELGSSSSKCNKIAPF EAVEHE PRIPPIRPTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHFG LKLDGN Q KL+QGEG EK+NGFY
Sbjct: 1 MSMEMMATERVCYVHCNFCNTILAVSVPYSSLLTIVTVRCGHCANLLSVNMGASLQAFPPQDPQKQLLSFEEPSSCKELGSSSSKCNKIAPFHEAVEHEQPRIPPIRPTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHFGLKNLKLDGNKQEKLDQGEGAEKSNGFY 186
BLAST of rna-XM_014663004.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445HP14|A0A445HP14_GLYSO (Putative axial regulator YABBY 2 isoform B OS=Glycine soja OX=3848 GN=D0Y65_033842 PE=3 SV=1) HSP 1 Score: 343.584 bits (880), Expect = 6.532e-119 Identity = 169/186 (90.86%), Postives = 175/186 (94.09%), Query Frame = 0
Query: 1 MSMEMMATERVCYVHCNFCNTILAVSVPYNSLLTIVTVRCGHCANLLSVNMGASLQPFPPQDPQ--KQHISFEEPSSKELGSSSSKCNKIAPFEAVEHEPPRIPPIRPTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHFG---LKLDGNSQGKLEQGEGGEKTNGFY 181
MSMEMMATERVCYVHCNFCNTILAVSVPY+SLLTIVTVRCGHCANLLSVNMGASLQ FPPQDPQ KQH+SF+EPSSKELGSSS KC+KIAPFEAVEHE PRIPPIRPTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHFG LKLDGN Q KL+QGEG EK+NGFY
Sbjct: 1 MSMEMMATERVCYVHCNFCNTILAVSVPYSSLLTIVTVRCGHCANLLSVNMGASLQAFPPQDPQSQKQHLSFQEPSSKELGSSS-KCSKIAPFEAVEHELPRIPPIRPTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHFGLKNLKLDGNKQEKLDQGEGAEKSNGFY 185
BLAST of rna-XM_014663004.2 vs. UniProtKB/TrEMBL
Match: tr|I1KFH5|I1KFH5_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_06G308900 PE=3 SV=1) HSP 1 Score: 339.732 bits (870), Expect = 2.225e-117 Identity = 171/188 (90.96%), Postives = 175/188 (93.09%), Query Frame = 0
Query: 1 MSMEMMATERVCYVHCNFCNTILAVSVPYNSLLTIVTVRCGHCANLLSVNMGASLQPFPPQDPQ--KQHISFEEPSS-KELGSSSSKCNKIAPF-EAVEHEPPRIPPIRPTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHFG---LKLDGNSQGKLEQGEGGEKTNGFY 181
MSMEMMATERVCYVHCNFCNTILAVSVPY+SLLTIVTVRCGHCANLLSVNMGASLQ FPPQDPQ KQ +SFEEPSS KELGSSSSKCNKIAPF EAVEHE PRIPPIRPTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHFG LKLDGN Q KL+QGEG EK+NGFY
Sbjct: 1 MSMEMMATERVCYVHCNFCNTILAVSVPYSSLLTIVTVRCGHCANLLSVNMGASLQAFPPQDPQSQKQLLSFEEPSSCKELGSSSSKCNKIAPFHEAVEHEQPRIPPIRPTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHFGLKNLKLDGNKQEKLDQGEGAEKSNGFY 188
BLAST of rna-XM_014663004.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445KG97|A0A445KG97_GLYSO (Putative axial regulator YABBY 2 isoform A OS=Glycine soja OX=3848 GN=D0Y65_016290 PE=3 SV=1) HSP 1 Score: 339.732 bits (870), Expect = 2.225e-117 Identity = 171/188 (90.96%), Postives = 175/188 (93.09%), Query Frame = 0
Query: 1 MSMEMMATERVCYVHCNFCNTILAVSVPYNSLLTIVTVRCGHCANLLSVNMGASLQPFPPQDPQ--KQHISFEEPSS-KELGSSSSKCNKIAPF-EAVEHEPPRIPPIRPTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHFG---LKLDGNSQGKLEQGEGGEKTNGFY 181
MSMEMMATERVCYVHCNFCNTILAVSVPY+SLLTIVTVRCGHCANLLSVNMGASLQ FPPQDPQ KQ +SFEEPSS KELGSSSSKCNKIAPF EAVEHE PRIPPIRPTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHFG LKLDGN Q KL+QGEG EK+NGFY
Sbjct: 1 MSMEMMATERVCYVHCNFCNTILAVSVPYSSLLTIVTVRCGHCANLLSVNMGASLQAFPPQDPQSQKQLLSFEEPSSCKELGSSSSKCNKIAPFHEAVEHEQPRIPPIRPTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHFGLKNLKLDGNKQEKLDQGEGAEKSNGFY 188 The following BLAST results are available for this feature:
BLAST of rna-XM_014663004.2 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot) Total hits: 10
BLAST of rna-XM_014663004.2 vs. Araport11
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11) Total hits: 10
BLAST of rna-XM_014663004.2 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0
Date Performed: 2023-06-20
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-XM_014663004.2_VrVC1973A-SNU_v1 ID=rna-XM_014663004.2_VrVC1973A-SNU_v1; Name=rna-XM_014663004.2; organism=Vigna radiata; type=mRNA; length=546bpback to top protein sequence of rna-XM_014663004.2_VrVC1973A-SNU_v1 >rna-XM_014663004.2_VrVC1973A-SNU_v1 ID=rna-XM_014663004.2_VrVC1973A-SNU_v1; Name=rna-XM_014663004.2_VrVC1973A-SNU_v1; organism=Vigna radiata; type=polypeptide; length=181bpback to top mRNA from alignment at chr02:8542691..8548884+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>rna-XM_014663004.2_VrVC1973A-SNU_v1 ID=rna-XM_014663004.2_VrVC1973A-SNU_v1; Name=rna-XM_014663004.2; organism=Vigna radiata; type=mRNA; length=6194bp; location=Sequence derived from: chr02:8542691..8548884+ (Vigna radiataback to top Coding sequence (CDS) from alignment at chr02:8542691..8548884+ >rna-XM_014663004.2_VrVC1973A-SNU_v1 ID=rna-XM_014663004.2_VrVC1973A-SNU_v1; Name=rna-XM_014663004.2; organism=Vigna radiata; type=CDS; length=546bp; location=Sequence derived from: chr02:8542691..8548884+ (Vigna radiataback to top |