rna-XM_014663436.2
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Transcript Overview
References
External references for this mRNA
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of rna-XM_014663436.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q8GWE0|PP314_ARATH (Pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=P67 PE=1 SV=3) HSP 1 Score: 706.442 bits (1822), Expect = 0.000e+0 Identity = 341/596 (57.21%), Postives = 440/596 (73.83%), Query Frame = 0
Query: 414 YSSHLKHSDSLESSNPWEQQVSTILKGIVGKISERDAIFILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQTPKEEFGKLTDCIEKANPKLGTAIRYLVEGKE-GNGDFRKETVELLNSFHAEVKKPLCNCLIDLCVKLNVPERACDLLDLGLMLEIYTDIQSRSQNQWSLHLKELSVGAAMTALHVWINDLSR-ELESGKDLPPLLGINTGQGKHKYSDKGLATVFESHLKELNAPFYEASDNPGWFLVTKPAAISWLESRVSTESIAS 1007
YSS +K ++SL++ P E V ++ G GK+ E+DA+ L M +P TA VL + +R EVI YNVT+ +FRKS+D E +EKLFDEML RG+KPDN TF+T+ CA +G P +AVE FEKM SFGCE D+VT +AMI +Y R VD AL LY RA+ EKWR+DAVTFS LI+++ V+GNYD CL IY++MK GVKP++ YN L+ +M RA+ QAK IY ++ +G +P++ TYA+L+ Y RA G+DAL +Y+EM+ G+++T LYN LLSMCAD Y+D+A EIF DMK+ E+C PDSWTF+ L+T+Y+ SGRVSEAE L +M ++G +P +FV+TS++ CYGK K+ DDVV+ F+Q+LELGI P+D FC CLLNV+TQTP EE GKL C+EKA PKLG ++ LVE + G F+KE EL++S ++VKK NCLIDLCV LN ERAC++L LGL +IYT +QS+S QWSLHLK LS+GAA+TALHVW+NDLS LESG++ PPLLGINTG GKHKYSDKGLA VFESHLKELNAPF+EA D GWFL T AA +WLESR S +++
Sbjct: 109 YSSLIKLAESLDACKPNEADVCDVITGFGGKLFEQDAVVTLNNMTNPETAPLVLNNLLETMKPSR--EVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPDDRFCGCLLNVMTQTPSEEIGKLIGCVEKAKPKLGQVVKMLVEEQNCEEGVFKKEASELIDSIGSDVKKAYLNCLIDLCVNLNKLERACEILQLGLEYDIYTGLQSKSATQWSLHLKSLSLGAALTALHVWMNDLSEAALESGEEFPPLLGINTGHGKHKYSDKGLAAVFESHLKELNAPFHEAPDKVGWFLTTSVAAKAWLESRRSAGGVSA 702 HSP 2 Score: 405.986 bits (1042), Expect = 3.566e-127 Identity = 202/467 (43.25%), Postives = 287/467 (61.46%), Query Frame = 0
Query: 51 LRDAKLDDPDAKSSSLSKNSIWVNPKSSRVKQLWKNSPQTRSSFLSKLAKSLDSCNPTNEHVFQILDVLGDNILERDAVFILNVMVNPTTALLALEHFQQKINPAKHVVLYNVTLKVFREVRDFEGIEKLFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESSNPWEQQVSTILKGIVGKISERDAIFILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDN 517
L D L P+ +S K+ +WVNPKS R QL + S +R S L KLA+SLD+C P V ++ G + E+DAV LN M NP TA L L + + + P++ V+LYNVT+KVFR+ +D E EKLFDEML+RG+ P+ TF+TII+ A +P++AVEWFEKM SFG EPDN MI AY +GN ++A+ LYDRA+ EKWR+D FS LI+ G+S N+DGCL++Y +MK LGVKPN+V YN L+ +MGR +R AK IY+D++ +GF+P+W+TYAAL++AY +AR+ +DAL +YREMKEKG+ + +LYN L MCAD +DEA EIF+DMK+ TC PD++T++ LI +Y+ G++SE +A + + LFVL + + K++ + + FD++L G+ PD+
Sbjct: 71 LVDVDLPIPEPTAS---KSYVWVNPKSPRASQLRRKSYDSRYSSLIKLAESLDACKPNEADVCDVITGFGGKLFEQDAVVTLNNMTNPETAPLVLNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACS-------------------------GRVSEAEAALLQMREAGFEPTLFVL------------------TSVIQCYGKAKQVDDVVRTFDQVLELGITPDD 491
BLAST of rna-XM_014663436.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q10PZ4|ATP4_ORYSJ (Pentatricopeptide repeat-containing protein ATP4 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0215900 PE=3 SV=1) HSP 1 Score: 582.793 bits (1501), Expect = 0.000e+0 Identity = 284/564 (50.35%), Postives = 384/564 (68.09%), Query Frame = 0
Query: 446 SERDAIFIL-TKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSS--ESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQTPKEEFGKLTDCIEKANPKLGTAIRYLVEGKEGNGDFRKETVELLNSFHAEVKKPLCNCLIDLCVKLNVPERACDLLDLGLMLEIYTDIQSRSQNQWSLHLKELSVGAAMTALHVWINDLSRELESGKDLPPLLGINTGQGKHKYSDKGLATVFESHLKELNAPFYEASDNPGWFLVTKPAAISWLESRVSTESIA 1006
SE+DA+ +L T P + L +F N KEVI YNV L RK R + AE L++EML GV+PDN TFST+ CA G P KAVE FEKMP FGC D +T SA+I +Y R + AL LY RA+AEKW++D V + +I++ S +GN+D L ++++MK GVKP++ YN +L AM RA KTI+ E+ + P+ TY LL YTRA GEDA+ +Y+ M+ +++ LYN LLSMCAD+GY+++A EIF DMK+S +PDSW+++ ++T+YS +G V+ AEGILNEM+++G +PNIF++TSL+ CYGK RTDDVV+ F L +LGI P+D FC CLL V TP +E GK+ CI++++ +LG +R LV+ + R+ ELL V+ P CNCL+DL V L+ E+AC LLD+ L L IY+++Q+R+Q QWSLHL+ LSVGAA+T LHVW++DL L++G +LPPLLGI+TGQGK+ YS KGLATVFESHLKEL+APF+EA D GWFL T AA WLE++ S E +A
Sbjct: 114 SEQDAVIVLNTTSARPAAVVLALWWFLR--NAEVRKEVILYNVALKALRKRRRWSDAEALWEEMLREGVQPDNATFSTVISCARACGMPGKAVEWFEKMPDFGCSPDMLTYSAVIDAYGRAGDAETALRLYDRARAEKWQLDPVICATVIRVHSSSGNFDGALNVFEEMKAAGVKPNLVVYNTVLDAMGRAMRPWVVKTIHRELVSQEAVPNKATYCCLLHAYTRARYGEDAMAVYRVMKDEVMDIDVVLYNMLLSMCADIGYVEEAEEIFRDMKASMDSRSKPDSWSYSSMVTLYSCTGNVAGAEGILNEMVEAGFKPNIFILTSLIRCYGKAGRTDDVVRSFAMLEDLGITPDDRFCGCLLTVAAGTPADELGKVIGCIDRSSAQLGAVVRLLVDAAAPSEPLREAAGELLGGARGVVRMPYCNCLMDLAVNLSQMEKACALLDVALRLGIYSNVQTRTQTQWSLHLRGLSVGAALTTLHVWMSDLYAALQAGDELPPLLGIHTGQGKNTYSYKGLATVFESHLKELDAPFHEAPDKAGWFLTTSVAARHWLETKKSAELVA 675 HSP 2 Score: 286.574 bits (732), Expect = 4.925e-83 Identity = 139/294 (47.28%), Postives = 196/294 (66.67%), Query Frame = 0
Query: 125 ERDAVFILNVM-VNPTTALLALEHFQQKINPAKHVVLYNVTLKVFREVRDFEGIEKLFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSS--GTCQPDNFTYACLINMYS 415
E+DAV +LN P +LAL F + K V+LYNV LK R+ R + E L++EML+ GV P+ TFST+I+ A C +P KAVEWFEKM FG PD + +I AY +G+AE A++LYDRA+AEKW++D + + +I+ S NFDG L+V+ +MK GVKPN+V YNT+L AMGR R K I+ ++++ P+ ATY LL AY +AR+ EDA+ VYR MK++ MD+D VLYN+L MCAD+G ++EA EIF DMK+S +PD+++Y+ ++ +YS
Sbjct: 115 EQDAVIVLNTTSARPAAVVLALWWFLRNAEVRKEVILYNVALKALRKRRRWSDAEALWEEMLREGVQPDNATFSTVISCARACGMPGKAVEWFEKMPDFGCSPDMLTYSAVIDAYGRAGDAETALRLYDRARAEKWQLDPVICATVIRVHSSSGNFDGALNVFEEMKAAGVKPNLVVYNTVLDAMGRAMRPWVVKTIHRELVSQEAVPNKATYCCLLHAYTRARYGEDAMAVYRVMKDEVMDIDVVLYNMLLSMCADIGYVEEAEEIFRDMKASMDSRSKPDSWSYSSMVTLYS 408 HSP 3 Score: 71.633 bits (174), Expect = 2.046e-11 Identity = 51/242 (21.07%), Postives = 107/242 (44.21%), Query Frame = 0
Query: 159 VLYNVTLKVFREVRDFEGIEKLFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVL---GVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCAD---------VGCLDEAS 388
V+ ++V +F+G +F+EM GV PN++ ++T++ + P ++ S P+ + + ++ AY + E AM +Y K E +D +++ L+ C + ++ DMK KP+ +Y++++ A+ I +M+ +GF P+ +L++ Y KA +D + + +++ G+ D L + A +GC+D +S
Sbjct: 255 VICATVIRVHSSSGNFDGALNVFEEMKAAGVKPNLVVYNTVLDAMGRAMRPWVVKTIHRELVSQEAVPNKATYCCLLHAYTRARYGEDAMAVYRVMKDEVMDIDVVLYNMLLSMCADIGYVEEAEEIFRDMKASMDSRSKPDSWSYSSMVTLYSCTGNVAGAEGILNEMVEAGFKPNIFILTSLIRCYGKAGRTDDVVRSFAMLEDLGITPDDRFCGCLLTVAAGTPADELGKVIGCIDRSS 496
BLAST of rna-XM_014663436.2 vs. UniProtKB/Swiss-Prot
Match: sp|B4F8Z1|ATP4_MAIZE (Pentatricopeptide repeat-containing protein ATP4, chloroplastic OS=Zea mays OX=4577 GN=ATP4 PE=2 SV=1) HSP 1 Score: 579.711 bits (1493), Expect = 0.000e+0 Identity = 288/565 (50.97%), Postives = 379/565 (67.08%), Query Frame = 0
Query: 446 SERDAIFILTKMVDPNTALFVL--RYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESC--QPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQTPKEEFGKLTDCIEKANPKLGTAIRYLVEGKEGNGDFRKETVELLNSFHAEVKKPLCNCLIDLCVKLNVPERACDLLDLGLMLEIYTDIQSRSQNQWSLHLKELSVGAAMTALHVWINDLSRELESGKD-LPPLLGINTGQGKHKYSDKGLATVFESHLKELNAPFYEASDNPGWFLVTKPAAISWLESRVSTESI 1005
SE+DA+ +L VL R+F N K+VI YNV L L RK R + E L+ EML GV+PDN TFST+ CA G KAVE F+KMP FGC D +T SA+I +Y + AL LY RA+AEKW++D V S +IK+ S +GN+D L ++++MK GV+P++ YN +L AM RA KTI+ EM + V P TY LL YTRA GEDA+ +Y+ M+ + + LYN LLSMCAD+GY+D+A EIF DMK+S +PDSW+++ ++T+YS + V AEGILNEM+++G +PNIFV+TSL+ CYGK RTDDVV+ F L +LGI P+D FC CLL+V TP EE GK+ CIE++N +LG ++ LV+ + + FR+ ELL S VK P CNCL+DLCV LN E+AC LLD L IY +IQ+R+Q QWSLHL+ LSVGAA+T LHVW+NDL L++G + LPPLLGI+TGQGK+ YSD+GLA +FE+HLKEL+APF+EA D GWFL T AA WLES+ ++E +
Sbjct: 128 SEQDAVIVLNTAAATRAETAVLALRWFLG--NAKVRKKVILYNVVLKLLRKKRLWSETEALWAEMLRDGVQPDNATFSTVISCARACGLHSKAVEWFDKMPEFGCSPDMLTYSAVIDAYGHAGNSEAALRLYDRARAEKWQLDPVICSTVIKVHSTSGNFDGALNVFEEMKAIGVRPNLVVYNTMLDAMGRALRPWVVKTIHREMVDQQVQPSRATYCCLLHAYTRARYGEDAMAVYRLMKDEAMGIDVMLYNMLLSMCADIGYVDEAEEIFRDMKASMGAHSKPDSWSYSSMVTLYSSTANVLSAEGILNEMVEAGFKPNIFVLTSLIRCYGKVGRTDDVVRSFGMLQDLGIIPDDRFCGCLLSVAANTPAEELGKVISCIERSNVQLGAVVKLLVD-RSSSESFREAARELLRSSRGVVKMPYCNCLMDLCVNLNQMEKACALLDAAQQLGIYANIQTRTQTQWSLHLRGLSVGAALTTLHVWMNDLYTSLQTGNEGLPPLLGIHTGQGKNTYSDRGLAAMFEAHLKELDAPFHEAPDKAGWFLTTNVAAKQWLESKAASELV 689 HSP 2 Score: 283.493 bits (724), Expect = 9.603e-82 Identity = 140/296 (47.30%), Postives = 194/296 (65.54%), Query Frame = 0
Query: 125 ERDAVFILNVMVNPTTA--LLALEHFQQKINPAKHVVLYNVTLKVFREVRDFEGIEKLFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSS--GTCQPDNFTYACLINMYSS 416
E+DAV +LN +LAL F K V+LYNV LK+ R+ R + E L+ EML+ GV P+ TFST+I+ A C L KAVEWF+KM FG PD + +I AY +GN+E A++LYDRA+AEKW++D + S +IK S NFDG L+V+ +MK +GV+PN+V YNT+L AMGR R K I+ +M++ PS ATY LL AY +AR+ EDA+ VYR MK++ M +D +LYN+L MCAD+G +DEA EIF DMK+S +PD+++Y+ ++ +YSS
Sbjct: 129 EQDAVIVLNTAAATRAETAVLALRWFLGNAKVRKKVILYNVVLKLLRKKRLWSETEALWAEMLRDGVQPDNATFSTVISCARACGLHSKAVEWFDKMPEFGCSPDMLTYSAVIDAYGHAGNSEAALRLYDRARAEKWQLDPVICSTVIKVHSTSGNFDGALNVFEEMKAIGVRPNLVVYNTMLDAMGRALRPWVVKTIHREMVDQQVQPSRATYCCLLHAYTRARYGEDAMAVYRLMKDEAMGIDVMLYNMLLSMCADIGYVDEAEEIFRDMKASMGAHSKPDSWSYSSMVTLYSS 424 HSP 3 Score: 78.1814 bits (191), Expect = 2.189e-13 Identity = 51/225 (22.67%), Postives = 104/225 (46.22%), Query Frame = 0
Query: 159 VLYNVTLKVFREVRDFEGIEKLFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKV-LGV--KPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCAD 380
V+ + +KV +F+G +F+EM GV PN++ ++T++ + P +M V+P + + ++ AY + E AM +Y K E +D +++ L+ C D ++ DMK +G KP+ +Y++++ L A+ I +M+ +GF P+ +L++ Y K +D + + +++ G+ D L + A+
Sbjct: 270 VICSTVIKVHSTSGNFDGALNVFEEMKAIGVRPNLVVYNTMLDAMGRALRPWVVKTIHREMVDQQVQPSRATYCCLLHAYTRARYGEDAMAVYRLMKDEAMGIDVMLYNMLLSMCADIGYVDEAEEIFRDMKASMGAHSKPDSWSYSSMVTLYSSTANVLSAEGILNEMVEAGFKPNIFVLTSLIRCYGKVGRTDDVVRSFGMLQDLGIIPDDRFCGCLLSVAAN 494
BLAST of rna-XM_014663436.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LS25|PP420_ARATH (Pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g46580 PE=2 SV=1) HSP 1 Score: 407.527 bits (1046), Expect = 1.158e-127 Identity = 214/535 (40.00%), Postives = 329/535 (61.50%), Query Frame = 0
Query: 471 HSKINFTRDK-----EVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQ-TPKEEFGKLTDCIEKANPKLGTAIRYLVEGKEGNGDFRKETVELLNSFHAEVKKPLCNCLIDLCVKLNVPERACDLLDLGLMLEIYTDIQSRSQNQWSLHLKELSVGAAMTALHVWINDLSRELESGKDLPPLLGINTGQGKHKYSDKGLATVFESHLKELNAPFYEASDNPGWFLVTKPAAISWLESR 999
H+ N+ + K E I YNVT+ R R F+ E++ EM+ GV+ DNIT+ST+ CA +KA+E FE+M G D+VT SA++ Y+++ KV++ L LY RA A W+ DA+ FS L KMF AG+YD + Q+MK VKP+V YN LL AM RA A++++NEM +G++P+ T +L+++Y +A DAL L++EM+ + LYN LL+MCAD+G ++A +F DMK S C+PD++++T ++ +Y G+ +A + EM+++G+Q N+ T LV C GK KR DDVV +F+ ++ G+ P+D C CLL+V+ E+ K+ C+E+AN KL T + +V+ K ++E ++N+ E ++P CNCLID+C N ERA +LL LG + +Y + +++ +WSL ++ LSVGAA TAL W+ L+ ++ ++LP L TG G H++S +GLA F HL++L+APF + SD PG F+ TK +SWLES+
Sbjct: 170 HTFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLERANKKLVTFVNLIVDEKTEYETVKEEFKLVINATQVEARRPFCNCLIDICRGNNRHERAHELLYLGTLFGLYPGLHNKTIKEWSLDVRSLSVGAAETALEEWMRTLANIIKRQEELPELFLAQTGTGTHRFS-QGLANSFALHLQQLSAPFRQ-SDRPGIFVATKEDLVSWLESK 702 HSP 2 Score: 239.195 bits (609), Expect = 8.757e-66 Identity = 139/374 (37.17%), Postives = 209/374 (55.88%), Query Frame = 0
Query: 62 KSSSLSK-NSIWVNPKSSRVKQLWKNSPQTRSSF--------LSKLAKSLDSCNPTNEHVF-QILDVLGDNILERDAVFILNVMVNPTTALLALEHFQQKINPAKHVVLYNVTLKVFREVRDFEGIEKLFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLE 425
++ LSK S+WVNP + + + Q RS++ L A L+S T + F +LD + +A+ +LN + + K + YNVT+K R R F+ IE++ EM++ GV + IT+STIIT A C+L KA+EWFE+M G+ PD + ++ Y+ SG E + LY+RA A W+ D FS L K G + ++DG V +MK + VKPN+V YNTLL AMGR + A++++ +ML +G +P+ T AL++ Y KAR+ DAL ++ EMK K +D +LYN L +MCAD+G +EA +F DMK S C+PDNF+Y ++N+Y S K ++E
Sbjct: 81 QTQILSKPKSVWVNPTRPK-RSVLSLQRQKRSAYSYNPQIKDLRAFALKLNSSIFTEKSEFLSLLDEIPHPPNRDNALLVLNSLREWQKTHTFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAME 453 HSP 3 Score: 93.9745 bits (232), Expect = 2.599e-18 Identity = 59/237 (24.89%), Postives = 118/237 (49.79%), Query Frame = 0
Query: 159 VLYNVTLKVFREVRDFEGIEKLFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTC---GISENFDGCLSVYNDMK-VLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIF 391
+ ++V K+F E D++GI + EM V PN++ ++T++ + P A F +M G+ P+ +++ Y + A A++L++ KA+KW +D +++ L+ C G+ E + ++NDMK + +P+ +Y +L G G +A A ++E+ML +G + L+Q KA+ +D + V+ ++G+ D L L + A ++A ++
Sbjct: 292 IAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAE---RLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVM 525
BLAST of rna-XM_014663436.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9SZ52|PP344_ARATH (Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PGR3 PE=1 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 1.879e-54 Identity = 161/648 (24.85%), Postives = 301/648 (46.45%), Query Frame = 0
Query: 181 FDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLI-------------NMYSSHLKHSDSLESSNPWEQQVSTILK--GIVGKISERDAIFILTKMVDPNTALF-VLRYF--HSKIN--------FTRD----KEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEK-WRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPN 797
F++M +G+ PNI+ + + S + R+A + F ++ G+ PD+ + M++ Y+ G + A+KL D V ++LI T ++ D ++ MK + +KP +VTYNTLL +G+ + +A ++E M+ G P+ T+ L CK AL + +M + G D YN + G + EA F MK PD T L+ + ++ L + ++ WE + +IL GI +S + + D ++ L ++RY H+ ++ FT+D ++ TYN+ + ++ E A+ +F ++ G PD T++ + SG D+ EL+++M + CE + +T + +I + VD AL+LY +++ + A T+ LI S +G + +++ M G +P+ A YN L+ +A A ++ M GV PD TY+ L++ ++ L +KE++ +G+N YN +++ +++A+ +F +MK+S PD +T+ L+ +G V EA I NE+ ++GL+PN+F +L+ Y + + ++ ++ G PN
Sbjct: 456 FEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKK--LVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPN 1101 HSP 2 Score: 183.341 bits (464), Expect = 8.171e-46 Identity = 168/716 (23.46%), Postives = 311/716 (43.44%), Query Frame = 0
Query: 158 VVLYNVTLKVFREVRDFEGIEKLFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGI--SENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESS------------NPWEQQVSTILKGIV--GKISERDAIF--ILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKAL--------------------ELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLI-----------------IYQDM-KVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQTPKEEFG 817
VV Y V + R + +++F++M P+ +T+ T++ S +++ +M G PD F ++ A +GN A D + + + ++ LI CG+ D L ++ +M+ LGVKP TY + G+ ++ A +E M G +P+ A L + KA +A ++ +K+ G+ D+V YN++ + VG +DEA ++ +M +G C+PD LIN L +D ++ + P +T+L G+ GKI E +F ++ K PNT IT+N + K+ + A K+ +M+ G PD T++T+ +G +A+ F +M D VT ++ + + ++ A +L G AE +AV+FS + + + D L+ +++ K GV+P + TYN L+G +L A A+ ++ ++K++G PD TY LL+ Y ++ ++ LYKEM + +N ++S G +D A++++YD+ S P + T+ L+ S+SGR+ EA+ + M+ G +PN + L++ +GK D +F ++++ G+ P+ S L++ L + + G
Sbjct: 293 VVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLI--CGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENG-CEPDVIVVNSLINT----LYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNT--------------------ITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEG 980 HSP 3 Score: 166.777 bits (421), Expect = 1.185e-40 Identity = 150/629 (23.85%), Postives = 266/629 (42.29%), Query Frame = 0
Query: 162 NVTLKVFREVRDFEGIEKLFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESSNPWEQQVSTILKGIVGKISERDAIFILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLL 790
N L+ R E + +FD M +R + + T+ TI S S+ ++A KMR FG + + +I S AM++Y R E +R +S+L+ G + D + + +M+ LG+KPN+ T+ + +GR + +A I + M + G P TY L+ A C AR + A V+ +MK D V Y L D +D LD + + +M+ G PD T+ L++ ++ ++ + Q GI+ PN H TYN + + + A +LF M GVKP T+ SG A+E FEKM + G + V +A +YS A+ + +A +++ K D+VT++ ++K +S G D+ + + +M G +P V N+L+ + +A +A ++ MK + P +TY +LL + ++A+ L++ M G +N L + A+++ + M C PD +T+ ++ ++G+V EA ++M + + P+ + +L+ K +D KI L
Sbjct: 122 NYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHV-PDVVTFTILVDALCKAGNFGEAFDTLDVMRDQ------GIL-----------------PN--------LH------------TYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDM-GCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFL 704 HSP 4 Score: 162.54 bits (410), Expect = 2.639e-39 Identity = 140/623 (22.47%), Postives = 261/623 (41.89%), Query Frame = 0
Query: 233 FMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESSNPWEQQVSTILKGIVGKISERDAIFILTKMVDPNTALFVLRYFHSKINFTRDK-EVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNG-----------------------------------VNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQTPKEEFGKL 819
+M+ A G E ++D + + DT + + K+ + M+ G N +YN L++ + + R +A +Y M+ GF PS TY++L+ K R + +G+ +EM+ G+ + + + + G ++EA EI + M G C PD TY LI DA+ K+ D +F K+ R K + +TY L+ F +RD + ++ + EM G PD +TF+ + +G +A + + M G + T + +I R +++D ALEL+G ++ + A T+ I + +G+ L ++ MK +G+ P++ N L ++ +A R+AK I+ +K+ G+ PD +TY +++ Y++ ++A+ L EM NG + T YN LL+ G I +A+E+F M + C P++ TF L ++ V+ A +L +M+ G P++F +++ K + + + F+Q+ +L C+ L V+ + E+ K+
Sbjct: 123 YMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEG-CGPDVVTYTVLI-------------------------------------DALCTARKL-DCAKEVF------EKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGM-VQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKI 699 HSP 5 Score: 132.88 bits (333), Expect = 4.046e-30 Identity = 101/376 (26.86%), Postives = 173/376 (46.01%), Query Frame = 0
Query: 484 TYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELY-----GRAKAEK----------------------WR--------VDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQTPKEEFGKLTDCIE 824
TY+ + K RD + L EM G+KP+ TF+ +G ++A E+ ++M GC D VT + +I + K+D A E++ GR K ++ W D VTF+ L+ AGN+ + M+ +G+ P++ TYN L+ +LR A ++ M++ GV P TY ++ Y ++ AL +++M+ G+ N L A G +A +IFY +K PDS T+ +M YS+ G + EA +L+EM+++G +P++ V+ SL++ K R D+ K+F ++ E+ + P + LL L + GK+ + IE
Sbjct: 225 TYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDI-GLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKN-----GKIQEAIE 594 HSP 6 Score: 121.709 bits (304), Expect = 1.142e-26 Identity = 129/556 (23.20%), Postives = 238/556 (42.81%), Query Frame = 0
Query: 149 QQKINPAKHVVLYNVTLKVFREVRDFEGIEKLFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSW-ATYAALLQAYCKARFREDALGVYREM-KEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLE---SSNPWEQQVSTILKGIVGKISERDAIFILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKV-RGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKL 698
+ K+ P VV YN L + + +LF+ M+Q+G PN ITF+T+ A++ KM G PD + +I +G + AM + + K + + + L S D + N + +P + + L+ ++ +A + E ++ +G + +++ CK A ++ + K+ G+ YNLL + ++ A ++F +KS+G C PD TY L++ Y K + E + E + +TI IV I L K + + AL + S +F+ TY ++ KS A++LF+ ML G +P+ ++ + +G D A LF++M G D T S ++ +VD+ L + K D V ++ +I + ++ L+++ +MK RG+ P + TYN+L+ + A +A IYNE++ +G+ P+ T+ +L+ Y+ + E A +Y+ M G + Y +L
Sbjct: 566 EMKLKPT--VVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTG-CIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIV--------ISGLVKAGNVDDALDLYYDLMSDRDFS--PTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108 HSP 7 Score: 106.301 bits (264), Expect = 6.790e-22 Identity = 93/390 (23.85%), Postives = 166/390 (42.56%), Query Frame = 0
Query: 410 LINMYSSHLKHSDSLESSNPWEQQVSTILKGIVGKISERDAIFILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDH 799
+++M SS S +SS P + +G L D +++ + +N E T N L R E +FD M R +K D T+ T+ SV G +A KM FG + + + +I+ ++ +A+E+Y R E +R T+S+L+ + D + + ++M+ G+KP+V T+ + + RA +A I M + G PD +TY L++ A + A ++++M+ Y LL +D +D +V+ F+ + PD TFT L+ ++G EA L+ M G+ PN+ +L+ + R DD +++F + LG+ P +
Sbjct: 61 VVSMKSSDFSGSMIRKSSKPDLSSSEEVTRG-------------LKSFPDTDSSFSYFKSVAGNLNLVHTTE--TCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLD-SVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAY 434 HSP 8 Score: 95.9005 bits (237), Expect = 1.041e-18 Identity = 66/276 (23.91%), Postives = 120/276 (43.48%), Query Frame = 0
Query: 137 NPTTALLALEHFQQKINPAKHVVLYNVTLKVFREVRDFEGIEKLFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKL-YDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLI 411
N + A E F + + + YN+ + E E + +F ++ G P++ T++ ++ + + E +++M + E + +I +GN + A+ L YD + + LI S ++ M G +PN YN L+ G+ A A A+++ M+ G P TY+ L+ C ++ L ++E+KE G++ D V YNL+ + L+EA +F +MK+S PD +TY LI
Sbjct: 764 NVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLI 1039
BLAST of rna-XM_014663436.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LQ16|PPR94_ARATH (Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana OX=3702 GN=At1g62910 PE=2 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 1.030e-47 Identity = 137/595 (23.03%), Postives = 274/595 (46.05%), Query Frame = 0
Query: 180 LFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESSNPWEQQVSTILKGIVGKISERDAIFILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPN---IFVMTSLVH 771
LF +M++ P+I+ F+ ++++ + + + E+M++ G+ D + I + +A+ + + + D S+L+ S+ +++ + M +G KP+ T+ TL++ + +A +A A+ + M+ G P TY ++ CK + AL + ++M++ ++ D V+YN + D +D+A +F +M + G +PD FTY+ LI+ ++ + SD+ S +L ++ + ++PN V+T++ ++ F K AEKL+DEM+ R + PD T+S++ + D+A +FE M S C + VT S +I + + +V++ +EL+ + VT++ LI F A + D ++++ M GV P++ TYN LL + + +A ++ ++ S + PD TY ++E +A ED L+ + GV+ YN ++S G ++A + MK + P+S T+ L+ R G + ++ EM G + I ++T+++H
Sbjct: 70 LFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGI-RPDVFTYSSLISCLCNYGRWSDA-----------SRLLSDMI------------ERKINPN--------------------VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMK-EDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLH 619 HSP 2 Score: 148.673 bits (374), Expect = 7.480e-36 Identity = 121/533 (22.70%), Postives = 230/533 (43.15%), Query Frame = 0
Query: 266 FSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESSNPWEQQVSTILKGIVGKISERDAIFILTKMVDPNTALFVLRYFH-SKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPN 797
F+ L+ F+ +S+ M+ LG+ ++ TY+ + R + A A+ M+ G+ P T ++LL YC ++ DA+ + +M E G D + L EA + + M G CQPD TY ++N L K D + AL +L+ KI + +V+ YN ++ K + + A LF EM +G++PD T+S++ C G A L M + VT SA+I ++ + K+ +A +LY D T+S+LI F + D+ +++ M + P+V TY+ L+ +A+ + ++ EM G+ + +TY +L+ + +A ++A ++K+M GV+ YN LL G + KA+ +F ++ S + +PD +T+ ++ ++G+V + + + G+ PN+ +++ + + ++ + ++ E G PN
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG-CQPDLVTYGTVVNG----------------------------------------LCKRGDIDLALSLLKKMEKGKI----EADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRS-TMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPN 572 HSP 3 Score: 137.117 bits (344), Expect = 5.114e-32 Identity = 119/488 (24.39%), Postives = 225/488 (46.11%), Query Frame = 0
Query: 328 GFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESSNPWEQQVSTILKGIVGKISERDAIFI--LTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQTPK 813
G P+ ++ L + C R A G YRE +L N L +D+ +D+A ++F DM S +P F N S + + E +Q+ T+ GI + +IFI + + AL VL + + +++T + LN + S+ A L D+M+ G KPD TF+T+ + +AV L ++M GC+ D VT ++ + +D AL L + + K D V ++ +I + D L ++ +M +G++P V TY++L+ + A + ++M ++P+ +T+++L++ + + +A LY EM ++ Y+ L++ +D+A +F ++ S+ C P+ T++ L+ + ++ RV E + EM Q GL N T+L+H + + + D+ +F Q++ +G+ PN + LL+ L + K
Sbjct: 22 GNPPTVPSFFNLCGSGCWERSFASASGDYRE----------ILRNRL----SDIIKVDDAVDLFGDMVKS---RP--FPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL--GISHDLYTY-SIFINCFCRRSQLSLALAVL---AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF-ELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK 483 HSP 4 Score: 115.546 bits (288), Expect = 3.639e-25 Identity = 78/336 (23.21%), Postives = 152/336 (45.24%), Query Frame = 0
Query: 482 VITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQTPKEEFG 817
++ +N L+ K FE L ++M G+ D T+S C A+ + KM G E D VT S+++ Y + ++ A+ L + ++ D TF+ LI + + + + M RG +P + TY ++ + + + A ++ +M+ + D + Y ++++ + +DAL L+ EM G+ Y+ L+S + G A + DM + P+ TF+ L+ + + G++ EAE + +EMI+ + P+IF +SL++ + R D+ +F ++ PN S L+ + + E G
Sbjct: 83 IVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK-INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEG 417 HSP 5 Score: 112.849 bits (281), Expect = 3.004e-24 Identity = 112/502 (22.31%), Postives = 209/502 (41.63%), Query Frame = 0
Query: 316 DAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESSNPWEQQVSTILKGIVGKISERDAIFILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQTPKEEFG 817
DA ++ DM+ S PS + LL A K E + + +M+ G+ D Y++ + L A + M G +PD T + L+N Y HS + DA+ ++ +MV+ + Y FT + LF ++ E A L D+M+ RG +PD +T+ T+ G D A+ L +KM E D V + +I + +D AL L+ + R D T+S+LI G + + DM R + P+V T++ L+ A ++ +A+ +Y+EM + PD TY+SL+ + ++A +++ M Y+ L+ +++ +E+F +M S ++ T+T L+ + ++ A+ + +M+ G+ PNI L+ K + + +F L ++P+ + + ++ + + K E G
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGY-EPDIVTLSSLLNGYC----HSKRIS-----------------------DAVALVDQMVE-------MGYKPDTFTFT--------TLIHGLFLHNKASE-AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREM-SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDG 522 HSP 6 Score: 111.694 bits (278), Expect = 5.508e-24 Identity = 100/417 (23.98%), Postives = 177/417 (42.45%), Query Frame = 0
Query: 158 VVLYNVTLKVFREVRDFEGIEKLFDEMLQRGVNPNIITFSTIITSASMCSLPR--KAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESSNPWEQQVSTILKGIVGKISERDAIFILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKAL 572
VV+YN + + + + LF EM +G+ P++ T+S++I+ +C+ R A M + P+ F +I A+ G A KLYD D +S+LI + + D ++ M PN+VTY+TL+ + +R + ++ +M G + TY L+ + +AR ++A V+++M G+ + + YN+L D G L +A +FE ++ S T +PD +TY +I K D WE + LKG V PN VI YN ++ F + E A+ L +M G P++ T++T+ G + + EL ++M S G D ++ ++ + ++DK+
Sbjct: 258 VVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS--CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRS-TMEPDIYTYNIMIEGMCKAGKVEDG------WELFCNLSLKG-----------------VSPN--------------------VIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFA-GDASTIGLVTNMLHDGRLDKSF 627 HSP 7 Score: 109.383 bits (272), Expect = 3.828e-23 Identity = 71/266 (26.69%), Postives = 127/266 (47.74%), Query Frame = 0
Query: 146 EHFQQKINPAKHVVLYNVTLKVFREVRDFEGIEKLFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLI 411
+ ++KINP +VV ++ + F + EKL+DEM++R ++P+I T+S++I M +A FE M S P+ + +I+ + + E M+L+ +T ++ LI + + D V+ M +GV PN++TYN LL + + + A ++E + S P TY +++ CKA ED ++ + KG+ + + YN + G +EA + + MK G P++ TY LI
Sbjct: 318 DMIERKINP--NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPL-PNSGTYNTLI 580 HSP 8 Score: 99.3673 bits (246), Expect = 4.644e-20 Identity = 102/466 (21.89%), Postives = 185/466 (39.70%), Query Frame = 0
Query: 180 LFDEMLQRGVNPNIITFSTIITSASMC---------SLPRK----------------------------AVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESSNPWEQQVSTILKGIVGKISERDAIFILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLI 608
L D+M+QRG P+++T+ T++ +C SL +K A+ F +M + G+ PD + +I + G A +L K + FSALI +Y++M + P++ TY++L+ R +AK ++E M++ P+ TY+ L++ +CKA+ E+ + ++REM ++G+ + V Y L D A +F+ M S G P+ TY L++ + GK+++ A+ V Y T + ++ TYN+ + K+ E +LF + +GV P+ I ++TM G ++A L +KM G + T + +I + R + + EL ++ + DA T + M G DK +
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNG--LCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV-HPNILTYNILLDGLCKN-------------------------GKLAK---------------AMVVFEYLQRS---TMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLH-DGRLDKSFL 628 HSP 9 Score: 74.7146 bits (182), Expect = 2.479e-12 Identity = 64/273 (23.44%), Postives = 116/273 (42.49%), Query Frame = 0
Query: 567 KVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVE--IFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPN----DHFCSCLLNVLTQTPKEEFGKLTDCIE-KANPKLGT 832
KVD A++L+G + V F+ L+ + ++ + + + M+ G+ + TY+ + R A + +M G PD +T +SLL Y + DA+ L +M G + L+ L +KA E D CQPD T+ ++ + G + A +L +M + ++ ++ + +++ K+K DD + +F ++ GI P+ SCL N + L+D IE K NP + T
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIH---GLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL--LSDMIERKINPNVVT 330
BLAST of rna-XM_014663436.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LYZ9|PP362_ARATH (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX=3702 GN=At5g02860 PE=2 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 1.779e-47 Identity = 147/619 (23.75%), Postives = 288/619 (46.53%), Query Frame = 0
Query: 180 LFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNA-EVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESSNPWEQQVSTILKGIVGKISERDAIFILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPN 797
+F+ + + G + ++ +++++I++ + R+AV F+KM G +P + ++ + G L ++ K++ D ++ LI C V+ +MK G + VTYN LL G+ R +A + +M+ +GFSPS TY +L+ AY + ++A+ + +M EKG D Y L G ++ A IFE+M+++G C+P+ T+ I MY + K ++ ++ + E V + IV + A+F M + +F + F ++E T+N ++ + + FE A ++ ML GV PD T++T+ + G +++ ++ +M C+ +++T +++++YA ++ L + AV L+ + S + + ++K RG P + T N+++ R + +A + + MK G +P TY SL+ +++R+ + + +E+ G+ YN ++ + A IF +M++S PD T+ + Y+ EA G++ MI+ G +PN S+V Y K R D+ K+F + L +DP+
Sbjct: 195 MFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAG-CKPNICTFNAFIKMYGNRGKFTEMMKIFD--EINVCGLSPDIV-TWNTLLAVFGQNGMDSEVSGVFKE---MKRAGFVPERE--TFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNS-GIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDE-AKLFVEDLR-NLDPH 801 HSP 2 Score: 179.104 bits (453), Expect = 5.611e-45 Identity = 140/583 (24.01%), Postives = 260/583 (44.60%), Query Frame = 0
Query: 158 VVLYNVTLKVFREV-RDFEGIEKLFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYC-KARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSL--------ESSNPWEQQVSTILKGIVGKISERDAIFILTKMVD----PNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQP 726
++ YNV L VF ++ + I L ++M G+ P+ T++T+IT SL ++A + FE+M++ G D + ++ Y S + AMK+ + + +++LI D + + N M G KP++ TY TLL R + A +I+E+M N+G P+ T+ A ++ Y + +F E + ++ E+ G+ D V +N L + G E S +F++MK +G P+ T+ LI+ YS ++ P +T+L + + +L +M D PN +TY L+ + ++ L +E+ ++P + T+ + S +A F ++ G D T ++M+ Y R V KA + K + T+++L+ M S + ++ K I +++ +G+KP + +YN ++ A R R A I++EM+NSG+ PD ITY + + Y E+A+G+ + M +G + YN ++ L D+A D+++ + P
Sbjct: 243 LITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTE-MMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFV-PERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNE--------------------LTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDPHAP 803 HSP 3 Score: 171.785 bits (434), Expect = 1.269e-42 Identity = 136/603 (22.55%), Postives = 266/603 (44.11%), Query Frame = 0
Query: 208 LPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGR-GRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESSNPWEQQ--------VSTILKGI--VGKISERDAIF--ILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPN 797
L +A +WF K + + DNS+ +I G A +++ + + + +D +++LI S + ++V+ M+ G KP ++TYN +L G+ G ++ E M + G +P TY L+ + ++A V+ EMK G D V YN L D+ EA ++ +M +G P TY LI+ Y+ +++E N ++ +T+L G GK+ +IF + PN + T+N + ++ F K+FDE+ G+ PD +T++T+ +G + +F++M G + T + +I +Y+R ++A+ +Y R D T++ ++ + G +++ + +M+ KP+ TY +LL A + ++ E+ + + P + +L+ V ++ +A + E++ G + N ++S+ + KA + MK P T+ LM M+SRS ++E IL E++ G++P+I ++++ Y + R D +IF+++ GI P+
Sbjct: 153 LALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNG-FSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPN--------------------ICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMK-ERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPD 733 HSP 4 Score: 136.732 bits (343), Expect = 1.458e-31 Identity = 85/319 (26.65%), Postives = 169/319 (52.98%), Query Frame = 0
Query: 496 RDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDK---AVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGN-YDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQ 810
+ F+ A + FD + + + S +AI S+ G + A +F + G D + +++I ++A + + +A+ ++ + + + + +T++ ++ +F G ++K + + MK G+ P TYN L+ R H++A ++ EMK +G S D +TY +LL+VY ++ ++A+ + EM NG + + YN L+S A G +D+A+E+ M + + +PD +T+T L++ + R+G+V A I EM +G +PNI + + YG + +++KIF+++ G+ P+ + LL V Q
Sbjct: 149 KKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQM-AEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQ 466 HSP 5 Score: 131.724 bits (330), Expect = 5.631e-30 Identity = 81/325 (24.92%), Postives = 161/325 (49.54%), Query Frame = 0
Query: 482 VITYNVTLNLFRK-SRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPND-HFCSCL 804
+ITYNV LN+F K + L ++M G+ PD T++T+ C +A ++FE+M + G D VT +A++ Y ++++ +A+++ + VT+++LI ++ G D+ + + M +G KP V TY LL RA A +I+ EM+N+G P+ T+ + +++Y + + ++ E+ G++ +N LL++ G + +F +MK + P+ TF L++ YSR G +A + M+ +G+ P++ +++ + + K+ ++ + PN+ +CS L
Sbjct: 243 LITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRA-GFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLL 566 HSP 6 Score: 118.627 bits (296), Expect = 7.421e-26 Identity = 78/325 (24.00%), Postives = 153/325 (47.08%), Query Frame = 0
Query: 487 VTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKV-DKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQ 810
+ +++ K A +F+ + G D +++++ + SG +AV +F+KM GC+ +T + ++ + + +K L + K++ DA T++ LI + + ++++MK G TYN LL ++ ++A + NEM +G SP +TY SL+ Y R ++A+ L +M G Y LLS G ++ A+ IF +M+++ C+P+ TF + MY G+ +E I +E+ GL P+I +L+ +G+ +V +F ++ G P + L++ ++
Sbjct: 178 IIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNA-GCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSR 501 HSP 7 Score: 98.5969 bits (244), Expect = 1.098e-19 Identity = 61/247 (24.70%), Postives = 120/247 (48.58%), Query Frame = 0
Query: 570 KALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDAL-GLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQTPKEE 815
+A + + + K + +D + +I M G ++ ++ G V +Y +L+ A + +R+A ++ +M+ G P ITY +L V+ + + + L ++M+ +G+ A YN L++ C +A ++F +MK++ D T+ L+ +Y +S R EA +LNEM+ +G P+I SL+ Y + D+ +++ NQ+ E G P+ + LL+ + K E
Sbjct: 156 RAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAA-GFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVE 401
BLAST of rna-XM_014663436.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9CAN5|PPR98_ARATH (Pentatricopeptide repeat-containing protein At1g63080, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g63080 PE=2 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 8.385e-47 Identity = 138/575 (24.00%), Postives = 260/575 (45.22%), Query Frame = 0
Query: 180 LFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESSNPWEQQVSTILKGIVGKISERDAIFILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEM 754
LF EM++ P+I+ FS ++++ + + + EKM GV + + MI A+ + + + ++L+ +++ + M +G +P+ VT+ TL++ + + +A +A A+ E M+ G P TY A++ CK + AL + +M++ ++ D V+Y+ + D +D+A +F +M + G +PD FTY+ LI+ ++ + SD+ S +L + L + ++PN V+T+N ++ F K AEKLFDEM+ R + P+ +T++++ + D+A ++F M S C D VT + +I + + KV +EL+ + VT++ LI F A + D ++++ M GV P++ TYN LL + + +A ++ ++ S + PD TY + E +A ED L+ + GV YN ++S G ++A +F MK + PDS T+ L+ + R G + + ++ EM
Sbjct: 52 LFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGI-RPDVFTYSSLISCLCNYGRWSDA-----------SRLLSDM------------LERKINPN--------------------VVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKE-DGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581 HSP 2 Score: 156.762 bits (395), Expect = 1.473e-38 Identity = 127/533 (23.83%), Postives = 234/533 (43.90%), Query Frame = 0
Query: 266 FSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESSNPWEQQVSTILKGIVGKISERDAIFILTKMVDPNTALFVLRYFH-SKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPN 797
FS L+ + FD +S M++LGV N+ TYN ++ + R + A AI M+ G+ PS T +LL +C +A+ + +M E G D V + L EA + E M G CQPD TY +IN L K +P+ AL +L KI + +V+ Y+ ++ K R + A LF EM +G++PD T+S++ C G A L M + VT +++I ++A+ K+ +A +L+ + VT+++LI F + D+ I+ M + P V TYN L+ +A+ ++ +M G+ + +TY +L+ + +A ++A ++K+M +GV+ YN LL G ++KA+ +F ++ S+ +PD +T+ + ++G+V + + + G++P++ +++ + K ++ +F ++ E G P+
Sbjct: 68 FSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG-CQPDLVTYGAVING----------------------------------------LCKRGEPDLALNLLNKMEKGKI----EADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKM-EPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPD 554 HSP 3 Score: 156.377 bits (394), Expect = 1.918e-38 Identity = 128/539 (23.75%), Postives = 236/539 (43.78%), Query Frame = 0
Query: 129 VFILNVMVN------PTTALLALEHFQQKINPAKHVVLYNVTLKVFREVRDFEGIEKLFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESSNPWEQQVSTILKGIVGKISERDAIFILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYA 661
++ N+M+N + LA+ K+ +V N L F L D+M++ G P+ +TF+T++ + +AV E+M G +PD + +I G ++A+ L ++ + K D ++S +I + + D L+++ +M G++P++ TY++L+ + R DA + DML +P+ T+ +L+ A+ K +A ++ EM ++ +D + V YN L + LDEA +IF M S C PD TY LIN + K D +E + +G+VG NT +TY ++ F ++ D + A+ +F +M+ GV P+ +T++T+ +G +KA+ +FE + E D T + M + KV+ +L+ + + D + ++ +I F G ++ ++ MK G P TYN L+ A LR + + + EM++ + D TY
Sbjct: 100 LYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSK-DCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSR------RGLVG-----------------NT--------------------VTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYG 594 HSP 4 Score: 132.109 bits (331), Expect = 1.581e-30 Identity = 88/334 (26.35%), Postives = 161/334 (48.20%), Query Frame = 0
Query: 482 VITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQTPKEE 815
++T N LN F A L D+M+ G +PD +TF+T+ +AV L E+M GC+ D VT A+I + + D AL L + + K D V +S +I + D L ++ +M +G++P V TY++L+ + A + ++M ++P+ +T+ SL++ + + +A L+ EM ++ YN L++ +D+A +IF M S + C PD T+ L+ + ++ +V + + +M + GL N T+L+H + + D+ +F Q++ G+ PN + LL+ L + K E
Sbjct: 135 IVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD-CLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLE 467 HSP 5 Score: 108.612 bits (270), Expect = 5.589e-23 Identity = 73/332 (21.99%), Postives = 152/332 (45.78%), Query Frame = 0
Query: 482 VITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQTPK 813
++ ++ L+ K + F+ ++M GV + T++ M C A+ + KM G VT ++++ + N++ +A+ L + ++ D VTF+ L+ + + + + M V+G +P + TY ++ + + A + N+M+ + D + Y+++++ + +DAL L+ EM G+ Y+ L+S + G A + DM + P+ TF L+ +++ G++ EAE + +EMIQ + PNI SL++ + R D+ +IF ++ P+ + L+N + K
Sbjct: 65 IVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERK-INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKK 395 HSP 6 Score: 106.686 bits (265), Expect = 2.358e-22 Identity = 76/335 (22.69%), Postives = 156/335 (46.57%), Query Frame = 0
Query: 465 FVLR-YFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTM-AICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPN 797
F LR + S +++ +E ++ N L+L + A LF EM+ P + FS + + A + F D + EKM G + T + MI R +++ AL + G+ + VT ++L+ F + + + M G +P T+ L+ + + +A + M G PD +TY +++ + + AL L +M+ + +Y+ ++ ++D A+ +F +M ++ +PD +T++ L++ GR S+A +L++M++ + PN+ SL+ + K + + K+F+++++ IDPN
Sbjct: 17 FCLRGIYFSGLSYDGYREKLSRNALLHL-----KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKF-DLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEM-DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344 HSP 7 Score: 73.1738 bits (178), Expect = 7.192e-12 Identity = 58/231 (25.11%), Postives = 109/231 (47.19%), Query Frame = 0
Query: 158 VVLYNVTLKVFREVRDFEGIEKLFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIK-TCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEA 387
VV YN + F + + +LF +M +RG+ N +T++T+I S A F++M S GV P+ + ++ +G E AM +++ + K D ++ + + C + DG ++ + + GVKP+++ YNT++ + +A ++ M G P TY L++A+ + + + + +EM+ DA Y L+ DM D G LD+
Sbjct: 380 VVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDG-WDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHD-GRLDKG 608
BLAST of rna-XM_014663436.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q6NQ83|PP247_ARATH (Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22470 PE=1 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 5.814e-46 Identity = 145/590 (24.58%), Postives = 263/590 (44.58%), Query Frame = 0
Query: 180 LFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFD-MCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESSNPWEQQVSTILKGIVGKISERDAIFILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDK-----AVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMY-SRSGRVSEAEGILNEMIQSGLQPN 762
LF+ M+Q P I F+ + ++ + + + + M G+E D MI Y A + RA + DT FS L+ + +++ + M + +P++VT +TL+ + R +A + + M+ GF P TY +L CK+ AL ++R+M+E+ + V Y+++ D +C D G D+A +F +M+ G + D TY+ LI L + W+ D +L +M+ N +V+T++ +++F K A++L++EM+ RG+ PD IT++++ + GF + A ++F+ M S GCE D VT S +I SY + +VD + L+ ++ + +T++ L+ F +G + ++Q+M RGV PSV TY LL + +A I+ +M+ S ++ Y ++ A +DA L+ + GV YN ++ G + +A +F MK + C PD +T+ L+ + SG +S E ++ EM G +
Sbjct: 57 LFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKD-GSFDDALSLFNEMEMKGI-KADVVTYSSLIG----------GLCNDGKWD-----------------DGAKMLREMIGRNII----------------PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSL-----IDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK-EDGCTPDDFTYNILIRAHLGGSGLISSVE-LIEEMKVCGFSAD 594 HSP 2 Score: 136.732 bits (343), Expect = 5.922e-32 Identity = 120/497 (24.14%), Postives = 216/497 (43.46%), Query Frame = 0
Query: 316 DAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTC-----QPDNFTYACLINMYSSHLKHSDSLE--------SSNPWEQQVSTILKGIV--GKISERDAIFILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPN 797
DA ++E M+ S P+ + L A + + + LG + M+ G++ D ++ M + C ++ G +PD T++ L+N + + S+++ P VST++ G+ G++SE A+ ++ +MV+ F D+ +TY LN KS + A LF +M R +K + +S + G D A+ LF +M G + D VT S++I K D ++ D VTFSALI +F G + +Y +M RG+ P TYN+L+ + +A +++ M + G PD +TY+ L+ Y +A +D + L++E+ G+ YN L+ G ++ A E+F +M S P T+ L+ +G +++A I +M +S + I + ++H + DD +F L + G+ P+
Sbjct: 53 DAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHD------MYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSE--ALVLIDRMVE--------------YGFQPDE--VTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEM-VSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPD 524 HSP 3 Score: 135.961 bits (341), Expect = 1.061e-31 Identity = 115/520 (22.12%), Postives = 230/520 (44.23%), Query Frame = 0
Query: 266 FSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESSNPWEQ--------QVSTILKGIVGKISERDAIFILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALC--GE--DALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCY 773
F+ L ++ +D L M++ G++ +M T ++ R ++ L A ++ G+ P T++ L+ +C +A+ + M E D V + L + G + EA + + M G QPD TY ++N + +L+ E+ Q S ++ + S DA+ + +M +V+TY+ + ++ K+ EM+ R + PD +TFS + G +A EL+ +M + G D +T +++I + + N + +A +++ ++ D VT+S LI + A D + +++++ +G+ P+ TYN L+ ++ AK ++ EM + GV P +TY LL+ LC GE AL ++++MQ + + + +YN ++ + +D A +F + S + +PD T+ ++ + G +SEA+ + +M + G P+ F L+ +
Sbjct: 73 FNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGF-QPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIK----------------ADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLD----GLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSL-SDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAH 570 HSP 4 Score: 119.013 bits (297), Expect = 2.468e-26 Identity = 105/472 (22.25%), Postives = 195/472 (41.31%), Query Frame = 0
Query: 131 ILNVMVNPTTALLALEHFQ--QKINPAKHVVLYNVTLKVFREVRDFEGIEKLFDEMLQRGVNPNIITFSTIITSASMCSLPR--KAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESSNPWEQQVSTILKGIVGKISERDAIFILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFS 598
+LN + + LAL+ F+ ++ N VV Y++ + + F+ LF+EM +G+ +++T+S++I +C+ + + +M + PD F +I + G A +L YN+M G+ P+ +TYN+L+ + +A +++ M++ G P TY+ L+ +YCKA+ +D + ++RE+ KG+ + + YN L G L+ A E+F++M S G P TY L++ + + + +LE ++ T+ GI YN+ ++ + + A LF + +GVKPD +T++ M G +A LF KM GC DD T + +I ++ + + ++EL K + D+ T +I M S
Sbjct: 216 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLI--GGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKEL-----------------------------------YNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGV-PPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI-------------------------------------------YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLS 606 HSP 5 Score: 112.464 bits (280), Expect = 3.340e-24 Identity = 79/303 (26.07%), Postives = 141/303 (46.53%), Query Frame = 0
Query: 153 NPAKHVVLYNVTLKVFREVRDFEGIEKLFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESSNPWEQQV-------STILKGIVGKISER 448
N VV ++ + VF + ++L++EM+ RG+ P+ IT++++I + +A + F+ M S G EPD + +I +Y + + M+L+ ++ +T ++ L+ S + ++ +M GV P++VTY LL + A I+E M S + Y ++ C A +DA ++ + +KG+ D V YN++ G L EA +F MK G C PD+FTY LI +HL S + S E+ S+ +K ++ +S+R
Sbjct: 310 NIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG-CTPDDFTYNILIR---AHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDR 608 HSP 6 Score: 102.834 bits (255), Expect = 3.242e-21 Identity = 74/335 (22.09%), Postives = 149/335 (44.48%), Query Frame = 0
Query: 483 ITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQTPKEEFG 817
I +N + +++ ++ M G++ D T + M C A + + G E D +T S ++ + +V +A+ L R K R D VT S LI + G + L++ M G +P TY +L + ++ N A ++ +M+ + + Y+ +++ + +DAL L+ EM+ G+ Y+ L+ + G D ++ +M + PD TF+ L+ ++ + G++ EA+ + NEMI G+ P+ SL+ + K + ++F+ ++ G +P+ S L+N + + + G
Sbjct: 71 IDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM-IGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDG 404
BLAST of rna-XM_014663436.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LS88|PP250_ARATH (Pentatricopeptide repeat-containing protein At3g23020 OS=Arabidopsis thaliana OX=3702 GN=At3g23020 PE=2 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 1.055e-45 Identity = 173/722 (23.96%), Postives = 307/722 (42.52%), Query Frame = 0
Query: 110 EHVFQILDVLGDNILERDAVFILNVMVNPTTALLALEHFQQKINPAKHVVLYNVTLKVFREVRDFEGIEKLFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGV------FSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESSNPWEQQVSTI-------------LKGIVGKISERDAIFILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLG----------------AMLRARNH----------------------RQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTF----TFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLV 770
E V L + + ++ IL ++ A+ E F+ K +V+ YN+ L++ + + ++ L+DEM+++G+ P T+ T+I S L A+ W KM G++PD +++ Y + + A + + + ++ + D+ V ++ +I T G S + M G+ P VT+NT+++ G + + ++ + M +P TY L+ + K E A ++EMK+ G+ D V Y L + ++EA + +M + D +T + L MY ++ LE S W ++ G G +SE + +FI + V+ T VI YNV + + S+ E A +LF+ M+ GV PD T++T+ + + P K EKM G D + A+I S+ + +++ A E+Y D V + LI F+ GN + + + MK G+ + YN+L+ +L++ N R+A+ I++ MK G + +F T+A +L +Y + E+A + K+M+ + YN +L + A G +AVE F +M SS QPD TF T LM + V + E I + I+ GL+ I ++SLV
Sbjct: 139 EDVEDALSPWAERLSNKERTIILKEQIHWERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTM-KLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNV-EIDEYTQSALTRMYV----EAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRT-------------------VIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEF-TFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSS-GIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEIKRGLELWISTLSSLV 833 HSP 2 Score: 111.309 bits (277), Expect = 1.365e-23 Identity = 123/611 (20.13%), Postives = 255/611 (41.73%), Query Frame = 0
Query: 151 KINPAKHVVLYNVTLKVFREVRDFEGIEKLF------DEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKG--------MDVDA-------------------------VLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINM------------YSSHLKHSDSLESSNPWEQQVSTILKGIVGKISERDAIFILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCER----DDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLG 706
KI V + L+++++ R+F+ E+ F + V + T++T+I + ++A E F++M G+ P F MI Y ++G L K DT ++ LI + + + + + +MK G+KP+ V+Y TLLYA +A+ + +M + T +AL + Y +A E + ++ G ++DA + YN++ ++A E+FE M S G PD TY L+ + Y ++ + + P+ +S+ +K +G+++ + ++ +MV+ N + +V+ Y V +N F + + + A + M G+ +++ ++++ + G+ D+A ++ K+ C + D TS+ MI Y+ + V KA ++ K ++ + TF+ ++ M+ G +++ I + M+ + +YN++LG ++A + EM +SG+ PD T+ SL + + + A+ +E++ + +L+ LS +G
Sbjct: 250 KIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLH-CAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGV-TPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVK--LGQLNMAEEVY--KEMVEYNI----------------EPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQ-SCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMK-QRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEIKRGLELWISTLSSLVGIG 836 HSP 3 Score: 108.227 bits (269), Expect = 1.346e-22 Identity = 112/523 (21.41%), Postives = 221/523 (42.26%), Query Frame = 0
Query: 297 NMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIF------EDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESSNPWEQQVSTILKGIVGKISERDAIFILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAG---NYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQ 810
N++ YN +L +G+ + ++++++M+ G P +TY L+ Y K + AL +M + GM D V ++ M +A E F E+ S C ++TY +I+ Y K E+S +++ + + + I+ + T+L H + TR TYN+ ++L K+ D E A F EM G+KPD +++ T+ S+ ++A L +M E D+ T SA+ Y ++K+ + R + + +SA I + G ++ I Q++ R +V YN ++ A +++ +A ++ M + GV+PD TY +L+++ +AD+ +K C Y++K E Y C P + +++ + + G+++ AE + EM++ ++P++ V L++ + + + E GI N + L+ + T+
Sbjct: 186 NVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCL-SSYTYNTMIDTYG---KSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLHCAPD-TR-----TYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAG-NMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKR----TVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILA----------------------SADMPHK--GRC----YLEKMRETGY----VSDCIP----YCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTK 657 HSP 4 Score: 93.2041 bits (230), Expect = 5.487e-18 Identity = 98/521 (18.81%), Postives = 198/521 (38.00%), Query Frame = 0
Query: 400 CQPDNFTYACLINMYSSHLKHSDSLESS-NPWEQQVSTILKGIVGKISERDAIFILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTS-----------------------------------------SAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGV----------------------------------NVTADLYNKLLSMCADLGYIDKAVEIFYDMKS------------------SESCQ---------------PDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQT 811
C +Y I L + +E + +PW + ++S ++ IL + + A+ + +F SK + + VI YN+ L + K+ + + L+DEM+ +G+KP N T+ T+ S G A+ KM G + D+VT+ + MI +Y ++ ++ +A E + R E VTF+ +I ++ G + + + MK+ P TYN L+ + + +A + EMK+ G+ PD ++Y +LL ++ E+A GL EM + V N++++ Y+ + + GY+ +A +F + S+SC+ PD T+ L+ + + + + L +M ++G + +++ + K + + +++ +++E I+P+ L+N T
Sbjct: 117 CSTKRLSYGGCIPAILEALDSIEDVEDALSPWAE-----------RLSNKERTIILKEQIHWERAVEIFEWFKSKGCYELN--VIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLH-CAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADT 623 HSP 5 Score: 67.3958 bits (163), Expect = 5.774e-10 Identity = 58/259 (22.39%), Postives = 118/259 (45.56%), Query Frame = 0
Query: 602 NYDKCLIIYQDMKVRGV-KPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFY-----DMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQTPKEE-----FGKLTDCIEKANPK------LGTAIRYLVEGKEG 843
++++ + I++ K +G + +V YN +L + +A R +++++EM G+ P TY +L++VY++ AL +M G+ +L M KA E F + K+ S+T+ ++ Y +SG++ EA M++ G+ P +++H YG + +V + + ++L P+ + L+++ T+ E F ++ D K +P +IR++VE EG
Sbjct: 166 HWERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLM-KTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEG 423
BLAST of rna-XM_014663436.2 vs. Araport11
Match: AT4G16390.1 (| pentatricopeptide (PPR) repeat-containing protein | Chr4:9257985-9260093 FORWARD LENGTH=702 | 201606) HSP 1 Score: 706.442 bits (1822), Expect = 0.000e+0 Identity = 341/596 (57.21%), Postives = 440/596 (73.83%), Query Frame = 0
Query: 414 YSSHLKHSDSLESSNPWEQQVSTILKGIVGKISERDAIFILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQTPKEEFGKLTDCIEKANPKLGTAIRYLVEGKE-GNGDFRKETVELLNSFHAEVKKPLCNCLIDLCVKLNVPERACDLLDLGLMLEIYTDIQSRSQNQWSLHLKELSVGAAMTALHVWINDLSR-ELESGKDLPPLLGINTGQGKHKYSDKGLATVFESHLKELNAPFYEASDNPGWFLVTKPAAISWLESRVSTESIAS 1007
YSS +K ++SL++ P E V ++ G GK+ E+DA+ L M +P TA VL + +R EVI YNVT+ +FRKS+D E +EKLFDEML RG+KPDN TF+T+ CA +G P +AVE FEKM SFGCE D+VT +AMI +Y R VD AL LY RA+ EKWR+DAVTFS LI+++ V+GNYD CL IY++MK GVKP++ YN L+ +M RA+ QAK IY ++ +G +P++ TYA+L+ Y RA G+DAL +Y+EM+ G+++T LYN LLSMCAD Y+D+A EIF DMK+ E+C PDSWTF+ L+T+Y+ SGRVSEAE L +M ++G +P +FV+TS++ CYGK K+ DDVV+ F+Q+LELGI P+D FC CLLNV+TQTP EE GKL C+EKA PKLG ++ LVE + G F+KE EL++S ++VKK NCLIDLCV LN ERAC++L LGL +IYT +QS+S QWSLHLK LS+GAA+TALHVW+NDLS LESG++ PPLLGINTG GKHKYSDKGLA VFESHLKELNAPF+EA D GWFL T AA +WLESR S +++
Sbjct: 109 YSSLIKLAESLDACKPNEADVCDVITGFGGKLFEQDAVVTLNNMTNPETAPLVLNNLLETMKPSR--EVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPDDRFCGCLLNVMTQTPSEEIGKLIGCVEKAKPKLGQVVKMLVEEQNCEEGVFKKEASELIDSIGSDVKKAYLNCLIDLCVNLNKLERACEILQLGLEYDIYTGLQSKSATQWSLHLKSLSLGAALTALHVWMNDLSEAALESGEEFPPLLGINTGHGKHKYSDKGLAAVFESHLKELNAPFHEAPDKVGWFLTTSVAAKAWLESRRSAGGVSA 702 HSP 2 Score: 405.986 bits (1042), Expect = 3.648e-128 Identity = 202/467 (43.25%), Postives = 287/467 (61.46%), Query Frame = 0
Query: 51 LRDAKLDDPDAKSSSLSKNSIWVNPKSSRVKQLWKNSPQTRSSFLSKLAKSLDSCNPTNEHVFQILDVLGDNILERDAVFILNVMVNPTTALLALEHFQQKINPAKHVVLYNVTLKVFREVRDFEGIEKLFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESSNPWEQQVSTILKGIVGKISERDAIFILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDN 517
L D L P+ +S K+ +WVNPKS R QL + S +R S L KLA+SLD+C P V ++ G + E+DAV LN M NP TA L L + + + P++ V+LYNVT+KVFR+ +D E EKLFDEML+RG+ P+ TF+TII+ A +P++AVEWFEKM SFG EPDN MI AY +GN ++A+ LYDRA+ EKWR+D FS LI+ G+S N+DGCL++Y +MK LGVKPN+V YN L+ +MGR +R AK IY+D++ +GF+P+W+TYAAL++AY +AR+ +DAL +YREMKEKG+ + +LYN L MCAD +DEA EIF+DMK+ TC PD++T++ LI +Y+ G++SE +A + + LFVL + + K++ + + FD++L G+ PD+
Sbjct: 71 LVDVDLPIPEPTAS---KSYVWVNPKSPRASQLRRKSYDSRYSSLIKLAESLDACKPNEADVCDVITGFGGKLFEQDAVVTLNNMTNPETAPLVLNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACS-------------------------GRVSEAEAALLQMREAGFEPTLFVL------------------TSVIQCYGKAKQVDDVVRTFDQVLELGITPDD 491
BLAST of rna-XM_014663436.2 vs. Araport11
Match: AT5G46580.1 (| pentatricopeptide (PPR) repeat-containing protein | Chr5:18897510-18899645 REVERSE LENGTH=711 | 201606) HSP 1 Score: 407.527 bits (1046), Expect = 1.185e-128 Identity = 214/535 (40.00%), Postives = 329/535 (61.50%), Query Frame = 0
Query: 471 HSKINFTRDK-----EVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQ-TPKEEFGKLTDCIEKANPKLGTAIRYLVEGKEGNGDFRKETVELLNSFHAEVKKPLCNCLIDLCVKLNVPERACDLLDLGLMLEIYTDIQSRSQNQWSLHLKELSVGAAMTALHVWINDLSRELESGKDLPPLLGINTGQGKHKYSDKGLATVFESHLKELNAPFYEASDNPGWFLVTKPAAISWLESR 999
H+ N+ + K E I YNVT+ R R F+ E++ EM+ GV+ DNIT+ST+ CA +KA+E FE+M G D+VT SA++ Y+++ KV++ L LY RA A W+ DA+ FS L KMF AG+YD + Q+MK VKP+V YN LL AM RA A++++NEM +G++P+ T +L+++Y +A DAL L++EM+ + LYN LL+MCAD+G ++A +F DMK S C+PD++++T ++ +Y G+ +A + EM+++G+Q N+ T LV C GK KR DDVV +F+ ++ G+ P+D C CLL+V+ E+ K+ C+E+AN KL T + +V+ K ++E ++N+ E ++P CNCLID+C N ERA +LL LG + +Y + +++ +WSL ++ LSVGAA TAL W+ L+ ++ ++LP L TG G H++S +GLA F HL++L+APF + SD PG F+ TK +SWLES+
Sbjct: 170 HTFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLERANKKLVTFVNLIVDEKTEYETVKEEFKLVINATQVEARRPFCNCLIDICRGNNRHERAHELLYLGTLFGLYPGLHNKTIKEWSLDVRSLSVGAAETALEEWMRTLANIIKRQEELPELFLAQTGTGTHRFS-QGLANSFALHLQQLSAPFRQ-SDRPGIFVATKEDLVSWLESK 702 HSP 2 Score: 239.195 bits (609), Expect = 8.959e-67 Identity = 139/374 (37.17%), Postives = 209/374 (55.88%), Query Frame = 0
Query: 62 KSSSLSK-NSIWVNPKSSRVKQLWKNSPQTRSSF--------LSKLAKSLDSCNPTNEHVF-QILDVLGDNILERDAVFILNVMVNPTTALLALEHFQQKINPAKHVVLYNVTLKVFREVRDFEGIEKLFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLE 425
++ LSK S+WVNP + + + Q RS++ L A L+S T + F +LD + +A+ +LN + + K + YNVT+K R R F+ IE++ EM++ GV + IT+STIIT A C+L KA+EWFE+M G+ PD + ++ Y+ SG E + LY+RA A W+ D FS L K G + ++DG V +MK + VKPN+V YNTLL AMGR + A++++ +ML +G +P+ T AL++ Y KAR+ DAL ++ EMK K +D +LYN L +MCAD+G +EA +F DMK S C+PDNF+Y ++N+Y S K ++E
Sbjct: 81 QTQILSKPKSVWVNPTRPK-RSVLSLQRQKRSAYSYNPQIKDLRAFALKLNSSIFTEKSEFLSLLDEIPHPPNRDNALLVLNSLREWQKTHTFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAME 453 HSP 3 Score: 93.9745 bits (232), Expect = 2.659e-19 Identity = 59/237 (24.89%), Postives = 118/237 (49.79%), Query Frame = 0
Query: 159 VLYNVTLKVFREVRDFEGIEKLFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTC---GISENFDGCLSVYNDMK-VLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIF 391
+ ++V K+F E D++GI + EM V PN++ ++T++ + P A F +M G+ P+ +++ Y + A A++L++ KA+KW +D +++ L+ C G+ E + ++NDMK + +P+ +Y +L G G +A A ++E+ML +G + L+Q KA+ +D + V+ ++G+ D L L + A ++A ++
Sbjct: 292 IAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAE---RLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVM 525
BLAST of rna-XM_014663436.2 vs. Araport11
Match: AT4G31850.1 (| proton gradient regulation 3 | Chr4:15403020-15406358 FORWARD LENGTH=1112 | 201606) HSP 1 Score: 210.305 bits (534), Expect = 1.922e-55 Identity = 161/648 (24.85%), Postives = 301/648 (46.45%), Query Frame = 0
Query: 181 FDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLI-------------NMYSSHLKHSDSLESSNPWEQQVSTILK--GIVGKISERDAIFILTKMVDPNTALF-VLRYF--HSKIN--------FTRD----KEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEK-WRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPN 797
F++M +G+ PNI+ + + S + R+A + F ++ G+ PD+ + M++ Y+ G + A+KL D V ++LI T ++ D ++ MK + +KP +VTYNTLL +G+ + +A ++E M+ G P+ T+ L CK AL + +M + G D YN + G + EA F MK PD T L+ + ++ L + ++ WE + +IL GI +S + + D ++ L ++RY H+ ++ FT+D ++ TYN+ + ++ E A+ +F ++ G PD T++ + SG D+ EL+++M + CE + +T + +I + VD AL+LY +++ + A T+ LI S +G + +++ M G +P+ A YN L+ +A A ++ M GV PD TY+ L++ ++ L +KE++ +G+N YN +++ +++A+ +F +MK+S PD +T+ L+ +G V EA I NE+ ++GL+PN+F +L+ Y + + ++ ++ G PN
Sbjct: 456 FEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKK--LVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPN 1101 HSP 2 Score: 183.341 bits (464), Expect = 8.360e-47 Identity = 168/716 (23.46%), Postives = 311/716 (43.44%), Query Frame = 0
Query: 158 VVLYNVTLKVFREVRDFEGIEKLFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGI--SENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESS------------NPWEQQVSTILKGIV--GKISERDAIF--ILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKAL--------------------ELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLI-----------------IYQDM-KVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQTPKEEFG 817
VV Y V + R + +++F++M P+ +T+ T++ S +++ +M G PD F ++ A +GN A D + + + ++ LI CG+ D L ++ +M+ LGVKP TY + G+ ++ A +E M G +P+ A L + KA +A ++ +K+ G+ D+V YN++ + VG +DEA ++ +M +G C+PD LIN L +D ++ + P +T+L G+ GKI E +F ++ K PNT IT+N + K+ + A K+ +M+ G PD T++T+ +G +A+ F +M D VT ++ + + ++ A +L G AE +AV+FS + + + D L+ +++ K GV+P + TYN L+G +L A A+ ++ ++K++G PD TY LL+ Y ++ ++ LYKEM + +N ++S G +D A++++YD+ S P + T+ L+ S+SGR+ EA+ + M+ G +PN + L++ +GK D +F ++++ G+ P+ S L++ L + + G
Sbjct: 293 VVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLI--CGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENG-CEPDVIVVNSLINT----LYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNT--------------------ITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEG 980 HSP 3 Score: 166.777 bits (421), Expect = 1.212e-41 Identity = 150/629 (23.85%), Postives = 266/629 (42.29%), Query Frame = 0
Query: 162 NVTLKVFREVRDFEGIEKLFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESSNPWEQQVSTILKGIVGKISERDAIFILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLL 790
N L+ R E + +FD M +R + + T+ TI S S+ ++A KMR FG + + +I S AM++Y R E +R +S+L+ G + D + + +M+ LG+KPN+ T+ + +GR + +A I + M + G P TY L+ A C AR + A V+ +MK D V Y L D +D LD + + +M+ G PD T+ L++ ++ ++ + Q GI+ PN H TYN + + + A +LF M GVKP T+ SG A+E FEKM + G + V +A +YS A+ + +A +++ K D+VT++ ++K +S G D+ + + +M G +P V N+L+ + +A +A ++ MK + P +TY +LL + ++A+ L++ M G +N L + A+++ + M C PD +T+ ++ ++G+V EA ++M + + P+ + +L+ K +D KI L
Sbjct: 122 NYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHV-PDVVTFTILVDALCKAGNFGEAFDTLDVMRDQ------GIL-----------------PN--------LH------------TYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDM-GCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFL 704 HSP 4 Score: 162.54 bits (410), Expect = 2.700e-40 Identity = 140/623 (22.47%), Postives = 261/623 (41.89%), Query Frame = 0
Query: 233 FMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESSNPWEQQVSTILKGIVGKISERDAIFILTKMVDPNTALFVLRYFHSKINFTRDK-EVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNG-----------------------------------VNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQTPKEEFGKL 819
+M+ A G E ++D + + DT + + K+ + M+ G N +YN L++ + + R +A +Y M+ GF PS TY++L+ K R + +G+ +EM+ G+ + + + + G ++EA EI + M G C PD TY LI DA+ K+ D +F K+ R K + +TY L+ F +RD + ++ + EM G PD +TF+ + +G +A + + M G + T + +I R +++D ALEL+G ++ + A T+ I + +G+ L ++ MK +G+ P++ N L ++ +A R+AK I+ +K+ G+ PD +TY +++ Y++ ++A+ L EM NG + T YN LL+ G I +A+E+F M + C P++ TF L ++ V+ A +L +M+ G P++F +++ K + + + F+Q+ +L C+ L V+ + E+ K+
Sbjct: 123 YMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEG-CGPDVVTYTVLI-------------------------------------DALCTARKL-DCAKEVF------EKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGM-VQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKI 699 HSP 5 Score: 132.88 bits (333), Expect = 4.139e-31 Identity = 101/376 (26.86%), Postives = 173/376 (46.01%), Query Frame = 0
Query: 484 TYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELY-----GRAKAEK----------------------WR--------VDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQTPKEEFGKLTDCIE 824
TY+ + K RD + L EM G+KP+ TF+ +G ++A E+ ++M GC D VT + +I + K+D A E++ GR K ++ W D VTF+ L+ AGN+ + M+ +G+ P++ TYN L+ +LR A ++ M++ GV P TY ++ Y ++ AL +++M+ G+ N L A G +A +IFY +K PDS T+ +M YS+ G + EA +L+EM+++G +P++ V+ SL++ K R D+ K+F ++ E+ + P + LL L + GK+ + IE
Sbjct: 225 TYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDI-GLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKN-----GKIQEAIE 594 HSP 6 Score: 121.709 bits (304), Expect = 1.169e-27 Identity = 129/556 (23.20%), Postives = 238/556 (42.81%), Query Frame = 0
Query: 149 QQKINPAKHVVLYNVTLKVFREVRDFEGIEKLFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSW-ATYAALLQAYCKARFREDALGVYREM-KEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLE---SSNPWEQQVSTILKGIVGKISERDAIFILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKV-RGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKL 698
+ K+ P VV YN L + + +LF+ M+Q+G PN ITF+T+ A++ KM G PD + +I +G + AM + + K + + + L S D + N + +P + + L+ ++ +A + E ++ +G + +++ CK A ++ + K+ G+ YNLL + ++ A ++F +KS+G C PD TY L++ Y K + E + E + +TI IV I L K + + AL + S +F+ TY ++ KS A++LF+ ML G +P+ ++ + +G D A LF++M G D T S ++ +VD+ L + K D V ++ +I + ++ L+++ +MK RG+ P + TYN+L+ + A +A IYNE++ +G+ P+ T+ +L+ Y+ + E A +Y+ M G + Y +L
Sbjct: 566 EMKLKPT--VVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTG-CIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIV--------ISGLVKAGNVDDALDLYYDLMSDRDFS--PTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108 HSP 7 Score: 106.301 bits (264), Expect = 6.947e-23 Identity = 93/390 (23.85%), Postives = 166/390 (42.56%), Query Frame = 0
Query: 410 LINMYSSHLKHSDSLESSNPWEQQVSTILKGIVGKISERDAIFILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDH 799
+++M SS S +SS P + +G L D +++ + +N E T N L R E +FD M R +K D T+ T+ SV G +A KM FG + + + +I+ ++ +A+E+Y R E +R T+S+L+ + D + + ++M+ G+KP+V T+ + + RA +A I M + G PD +TY L++ A + A ++++M+ Y LL +D +D +V+ F+ + PD TFT L+ ++G EA L+ M G+ PN+ +L+ + R DD +++F + LG+ P +
Sbjct: 61 VVSMKSSDFSGSMIRKSSKPDLSSSEEVTRG-------------LKSFPDTDSSFSYFKSVAGNLNLVHTTE--TCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLD-SVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAY 434 HSP 8 Score: 95.9005 bits (237), Expect = 1.065e-19 Identity = 66/276 (23.91%), Postives = 120/276 (43.48%), Query Frame = 0
Query: 137 NPTTALLALEHFQQKINPAKHVVLYNVTLKVFREVRDFEGIEKLFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKL-YDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLI 411
N + A E F + + + YN+ + E E + +F ++ G P++ T++ ++ + + E +++M + E + +I +GN + A+ L YD + + LI S ++ M G +PN YN L+ G+ A A A+++ M+ G P TY+ L+ C ++ L ++E+KE G++ D V YNL+ + L+EA +F +MK+S PD +TY LI
Sbjct: 764 NVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLI 1039
BLAST of rna-XM_014663436.2 vs. Araport11
Match: AT1G62910.1 (| Pentatricopeptide repeat (PPR) superfamily protein | Chr1:23299060-23300958 FORWARD LENGTH=632 | 201606) HSP 1 Score: 184.882 bits (468), Expect = 1.053e-48 Identity = 137/595 (23.03%), Postives = 274/595 (46.05%), Query Frame = 0
Query: 180 LFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESSNPWEQQVSTILKGIVGKISERDAIFILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPN---IFVMTSLVH 771
LF +M++ P+I+ F+ ++++ + + + E+M++ G+ D + I + +A+ + + + D S+L+ S+ +++ + M +G KP+ T+ TL++ + +A +A A+ + M+ G P TY ++ CK + AL + ++M++ ++ D V+YN + D +D+A +F +M + G +PD FTY+ LI+ ++ + SD+ S +L ++ + ++PN V+T++ ++ F K AEKL+DEM+ R + PD T+S++ + D+A +FE M S C + VT S +I + + +V++ +EL+ + VT++ LI F A + D ++++ M GV P++ TYN LL + + +A ++ ++ S + PD TY ++E +A ED L+ + GV+ YN ++S G ++A + MK + P+S T+ L+ R G + ++ EM G + I ++T+++H
Sbjct: 70 LFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGI-RPDVFTYSSLISCLCNYGRWSDA-----------SRLLSDMI------------ERKINPN--------------------VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMK-EDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLH 619 HSP 2 Score: 148.673 bits (374), Expect = 7.653e-37 Identity = 121/533 (22.70%), Postives = 230/533 (43.15%), Query Frame = 0
Query: 266 FSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESSNPWEQQVSTILKGIVGKISERDAIFILTKMVDPNTALFVLRYFH-SKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPN 797
F+ L+ F+ +S+ M+ LG+ ++ TY+ + R + A A+ M+ G+ P T ++LL YC ++ DA+ + +M E G D + L EA + + M G CQPD TY ++N L K D + AL +L+ KI + +V+ YN ++ K + + A LF EM +G++PD T+S++ C G A L M + VT SA+I ++ + K+ +A +LY D T+S+LI F + D+ +++ M + P+V TY+ L+ +A+ + ++ EM G+ + +TY +L+ + +A ++A ++K+M GV+ YN LL G + KA+ +F ++ S + +PD +T+ ++ ++G+V + + + G+ PN+ +++ + + ++ + ++ E G PN
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG-CQPDLVTYGTVVNG----------------------------------------LCKRGDIDLALSLLKKMEKGKI----EADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRS-TMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPN 572 HSP 3 Score: 137.117 bits (344), Expect = 5.232e-33 Identity = 119/488 (24.39%), Postives = 225/488 (46.11%), Query Frame = 0
Query: 328 GFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESSNPWEQQVSTILKGIVGKISERDAIFI--LTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQTPK 813
G P+ ++ L + C R A G YRE +L N L +D+ +D+A ++F DM S +P F N S + + E +Q+ T+ GI + +IFI + + AL VL + + +++T + LN + S+ A L D+M+ G KPD TF+T+ + +AV L ++M GC+ D VT ++ + +D AL L + + K D V ++ +I + D L ++ +M +G++P V TY++L+ + A + ++M ++P+ +T+++L++ + + +A LY EM ++ Y+ L++ +D+A +F ++ S+ C P+ T++ L+ + ++ RV E + EM Q GL N T+L+H + + + D+ +F Q++ +G+ PN + LL+ L + K
Sbjct: 22 GNPPTVPSFFNLCGSGCWERSFASASGDYRE----------ILRNRL----SDIIKVDDAVDLFGDMVKS---RP--FPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL--GISHDLYTY-SIFINCFCRRSQLSLALAVL---AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF-ELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK 483 HSP 4 Score: 115.546 bits (288), Expect = 3.723e-26 Identity = 78/336 (23.21%), Postives = 152/336 (45.24%), Query Frame = 0
Query: 482 VITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQTPKEEFG 817
++ +N L+ K FE L ++M G+ D T+S C A+ + KM G E D VT S+++ Y + ++ A+ L + ++ D TF+ LI + + + + M RG +P + TY ++ + + + A ++ +M+ + D + Y ++++ + +DAL L+ EM G+ Y+ L+S + G A + DM + P+ TF+ L+ + + G++ EAE + +EMI+ + P+IF +SL++ + R D+ +F ++ PN S L+ + + E G
Sbjct: 83 IVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK-INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEG 417 HSP 5 Score: 112.849 bits (281), Expect = 3.074e-25 Identity = 112/502 (22.31%), Postives = 209/502 (41.63%), Query Frame = 0
Query: 316 DAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESSNPWEQQVSTILKGIVGKISERDAIFILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQTPKEEFG 817
DA ++ DM+ S PS + LL A K E + + +M+ G+ D Y++ + L A + M G +PD T + L+N Y HS + DA+ ++ +MV+ + Y FT + LF ++ E A L D+M+ RG +PD +T+ T+ G D A+ L +KM E D V + +I + +D AL L+ + R D T+S+LI G + + DM R + P+V T++ L+ A ++ +A+ +Y+EM + PD TY+SL+ + ++A +++ M Y+ L+ +++ +E+F +M S ++ T+T L+ + ++ A+ + +M+ G+ PNI L+ K + + +F L ++P+ + + ++ + + K E G
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGY-EPDIVTLSSLLNGYC----HSKRIS-----------------------DAVALVDQMVE-------MGYKPDTFTFT--------TLIHGLFLHNKASE-AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREM-SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDG 522 HSP 6 Score: 111.694 bits (278), Expect = 5.635e-25 Identity = 100/417 (23.98%), Postives = 177/417 (42.45%), Query Frame = 0
Query: 158 VVLYNVTLKVFREVRDFEGIEKLFDEMLQRGVNPNIITFSTIITSASMCSLPR--KAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESSNPWEQQVSTILKGIVGKISERDAIFILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKAL 572
VV+YN + + + + LF EM +G+ P++ T+S++I+ +C+ R A M + P+ F +I A+ G A KLYD D +S+LI + + D ++ M PN+VTY+TL+ + +R + ++ +M G + TY L+ + +AR ++A V+++M G+ + + YN+L D G L +A +FE ++ S T +PD +TY +I K D WE + LKG V PN VI YN ++ F + E A+ L +M G P++ T++T+ G + + EL ++M S G D ++ ++ + ++DK+
Sbjct: 258 VVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS--CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRS-TMEPDIYTYNIMIEGMCKAGKVEDG------WELFCNLSLKG-----------------VSPN--------------------VIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFA-GDASTIGLVTNMLHDGRLDKSF 627 HSP 7 Score: 109.383 bits (272), Expect = 3.916e-24 Identity = 71/266 (26.69%), Postives = 127/266 (47.74%), Query Frame = 0
Query: 146 EHFQQKINPAKHVVLYNVTLKVFREVRDFEGIEKLFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLI 411
+ ++KINP +VV ++ + F + EKL+DEM++R ++P+I T+S++I M +A FE M S P+ + +I+ + + E M+L+ +T ++ LI + + D V+ M +GV PN++TYN LL + + + A ++E + S P TY +++ CKA ED ++ + KG+ + + YN + G +EA + + MK G P++ TY LI
Sbjct: 318 DMIERKINP--NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPL-PNSGTYNTLI 580 HSP 8 Score: 99.3673 bits (246), Expect = 4.752e-21 Identity = 102/466 (21.89%), Postives = 185/466 (39.70%), Query Frame = 0
Query: 180 LFDEMLQRGVNPNIITFSTIITSASMC---------SLPRK----------------------------AVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESSNPWEQQVSTILKGIVGKISERDAIFILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLI 608
L D+M+QRG P+++T+ T++ +C SL +K A+ F +M + G+ PD + +I + G A +L K + FSALI +Y++M + P++ TY++L+ R +AK ++E M++ P+ TY+ L++ +CKA+ E+ + ++REM ++G+ + V Y L D A +F+ M S G P+ TY L++ + GK+++ A+ V Y T + ++ TYN+ + K+ E +LF + +GV P+ I ++TM G ++A L +KM G + T + +I + R + + EL ++ + DA T + M G DK +
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNG--LCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV-HPNILTYNILLDGLCKN-------------------------GKLAK---------------AMVVFEYLQRS---TMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLH-DGRLDKSFL 628 HSP 9 Score: 74.7146 bits (182), Expect = 2.536e-13 Identity = 64/273 (23.44%), Postives = 116/273 (42.49%), Query Frame = 0
Query: 567 KVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVE--IFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPN----DHFCSCLLNVLTQTPKEEFGKLTDCIE-KANPKLGT 832
KVD A++L+G + V F+ L+ + ++ + + + M+ G+ + TY+ + R A + +M G PD +T +SLL Y + DA+ L +M G + L+ L +KA E D CQPD T+ ++ + G + A +L +M + ++ ++ + +++ K+K DD + +F ++ GI P+ SCL N + L+D IE K NP + T
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIH---GLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL--LSDMIERKINPNVVT 330 HSP 10 Score: 63.5438 bits (153), Expect = 6.178e-10 Identity = 65/277 (23.47%), Postives = 126/277 (45.49%), Query Frame = 0
Query: 605 KCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDH-FCSCLLNVLTQTPKEEFGKLTDCIEK--ANPKL---GTAIRYLVEGKEGNGDFRKETVELLNSFHAEVKKPLCNCLID-LC 874
K L ++ +++ G P+V ++ NL G+ R+ A Y E+ + +S D I +DA+ L+ +M + + +NKLLS A + + + + M++ D +T++ + + R ++S A +L +M++ G +P+I ++SL++ Y KR D V + +Q++E+G P+ F + + + E L D + + P L GT + L K G+ D ++ + E + N +ID LC
Sbjct: 10 KRLFVHWNLQGIGNPPTVPSFFNLCGSGCWERSFASASGDYREILRNRLS-DIIKV-------------DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL-GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC--KRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLC 269
BLAST of rna-XM_014663436.2 vs. Araport11
Match: AT5G02860.5 (| Pentatricopeptide repeat (PPR) superfamily protein | Chr5:654102-656561 FORWARD LENGTH=819 | 201606) HSP 1 Score: 186.808 bits (473), Expect = 1.820e-48 Identity = 147/619 (23.75%), Postives = 288/619 (46.53%), Query Frame = 0
Query: 180 LFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNA-EVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESSNPWEQQVSTILKGIVGKISERDAIFILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPN 797
+F+ + + G + ++ +++++I++ + R+AV F+KM G +P + ++ + G L ++ K++ D ++ LI C V+ +MK G + VTYN LL G+ R +A + +M+ +GFSPS TY +L+ AY + ++A+ + +M EKG D Y L G ++ A IFE+M+++G C+P+ T+ I MY + K ++ ++ + E V + IV + A+F M + +F + F ++E T+N ++ + + FE A ++ ML GV PD T++T+ + G +++ ++ +M C+ +++T +++++YA ++ L + AV L+ + S + + ++K RG P + T N+++ R + +A + + MK G +P TY SL+ +++R+ + + +E+ G+ YN ++ + A IF +M++S PD T+ + Y+ EA G++ MI+ G +PN S+V Y K R D+ K+F + L +DP+
Sbjct: 195 MFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAG-CKPNICTFNAFIKMYGNRGKFTEMMKIFD--EINVCGLSPDIV-TWNTLLAVFGQNGMDSEVSGVFKE---MKRAGFVPERE--TFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNS-GIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDE-AKLFVEDLR-NLDPH 801 HSP 2 Score: 179.104 bits (453), Expect = 5.741e-46 Identity = 140/583 (24.01%), Postives = 260/583 (44.60%), Query Frame = 0
Query: 158 VVLYNVTLKVFREV-RDFEGIEKLFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYC-KARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSL--------ESSNPWEQQVSTILKGIVGKISERDAIFILTKMVD----PNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQP 726
++ YNV L VF ++ + I L ++M G+ P+ T++T+IT SL ++A + FE+M++ G D + ++ Y S + AMK+ + + +++LI D + + N M G KP++ TY TLL R + A +I+E+M N+G P+ T+ A ++ Y + +F E + ++ E+ G+ D V +N L + G E S +F++MK +G P+ T+ LI+ YS ++ P +T+L + + +L +M D PN +TY L+ + ++ L +E+ ++P + T+ + S +A F ++ G D T ++M+ Y R V KA + K + T+++L+ M S + ++ K I +++ +G+KP + +YN ++ A R R A I++EM+NSG+ PD ITY + + Y E+A+G+ + M +G + YN ++ L D+A D+++ + P
Sbjct: 243 LITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTE-MMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFV-PERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNE--------------------LTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDPHAP 803 HSP 3 Score: 171.785 bits (434), Expect = 1.298e-43 Identity = 136/603 (22.55%), Postives = 266/603 (44.11%), Query Frame = 0
Query: 208 LPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGR-GRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESSNPWEQQ--------VSTILKGI--VGKISERDAIF--ILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPN 797
L +A +WF K + + DNS+ +I G A +++ + + + +D +++LI S + ++V+ M+ G KP ++TYN +L G+ G ++ E M + G +P TY L+ + ++A V+ EMK G D V YN L D+ EA ++ +M +G P TY LI+ Y+ +++E N ++ +T+L G GK+ +IF + PN + T+N + ++ F K+FDE+ G+ PD +T++T+ +G + +F++M G + T + +I +Y+R ++A+ +Y R D T++ ++ + G +++ + +M+ KP+ TY +LL A + ++ E+ + + P + +L+ V ++ +A + E++ G + N ++S+ + KA + MK P T+ LM M+SRS ++E IL E++ G++P+I ++++ Y + R D +IF+++ GI P+
Sbjct: 153 LALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNG-FSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPN--------------------ICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMK-ERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPD 733 HSP 4 Score: 136.732 bits (343), Expect = 1.492e-32 Identity = 85/319 (26.65%), Postives = 169/319 (52.98%), Query Frame = 0
Query: 496 RDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDK---AVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGN-YDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQ 810
+ F+ A + FD + + + S +AI S+ G + A +F + G D + +++I ++A + + +A+ ++ + + + + +T++ ++ +F G ++K + + MK G+ P TYN L+ R H++A ++ EMK +G S D +TY +LL+VY ++ ++A+ + EM NG + + YN L+S A G +D+A+E+ M + + +PD +T+T L++ + R+G+V A I EM +G +PNI + + YG + +++KIF+++ G+ P+ + LL V Q
Sbjct: 149 KKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQM-AEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQ 466 HSP 5 Score: 131.724 bits (330), Expect = 5.761e-31 Identity = 81/325 (24.92%), Postives = 161/325 (49.54%), Query Frame = 0
Query: 482 VITYNVTLNLFRK-SRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPND-HFCSCL 804
+ITYNV LN+F K + L ++M G+ PD T++T+ C +A ++FE+M + G D VT +A++ Y ++++ +A+++ + VT+++LI ++ G D+ + + M +G KP V TY LL RA A +I+ EM+N+G P+ T+ + +++Y + + ++ E+ G++ +N LL++ G + +F +MK + P+ TF L++ YSR G +A + M+ +G+ P++ +++ + + K+ ++ + PN+ +CS L
Sbjct: 243 LITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRA-GFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLL 566 HSP 6 Score: 118.627 bits (296), Expect = 7.593e-27 Identity = 78/325 (24.00%), Postives = 153/325 (47.08%), Query Frame = 0
Query: 487 VTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKV-DKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQ 810
+ +++ K A +F+ + G D +++++ + SG +AV +F+KM GC+ +T + ++ + + +K L + K++ DA T++ LI + + ++++MK G TYN LL ++ ++A + NEM +G SP +TY SL+ Y R ++A+ L +M G Y LLS G ++ A+ IF +M+++ C+P+ TF + MY G+ +E I +E+ GL P+I +L+ +G+ +V +F ++ G P + L++ ++
Sbjct: 178 IIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNA-GCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSR 501 HSP 7 Score: 98.5969 bits (244), Expect = 1.124e-20 Identity = 61/247 (24.70%), Postives = 120/247 (48.58%), Query Frame = 0
Query: 570 KALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDAL-GLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQTPKEE 815
+A + + + K + +D + +I M G ++ ++ G V +Y +L+ A + +R+A ++ +M+ G P ITY +L V+ + + + L ++M+ +G+ A YN L++ C +A ++F +MK++ D T+ L+ +Y +S R EA +LNEM+ +G P+I SL+ Y + D+ +++ NQ+ E G P+ + LL+ + K E
Sbjct: 156 RAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAA-GFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVE 401
BLAST of rna-XM_014663436.2 vs. Araport11
Match: AT5G02860.4 (| Pentatricopeptide repeat (PPR) superfamily protein | Chr5:654102-656561 FORWARD LENGTH=819 | 201606) HSP 1 Score: 186.808 bits (473), Expect = 1.820e-48 Identity = 147/619 (23.75%), Postives = 288/619 (46.53%), Query Frame = 0
Query: 180 LFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNA-EVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESSNPWEQQVSTILKGIVGKISERDAIFILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPN 797
+F+ + + G + ++ +++++I++ + R+AV F+KM G +P + ++ + G L ++ K++ D ++ LI C V+ +MK G + VTYN LL G+ R +A + +M+ +GFSPS TY +L+ AY + ++A+ + +M EKG D Y L G ++ A IFE+M+++G C+P+ T+ I MY + K ++ ++ + E V + IV + A+F M + +F + F ++E T+N ++ + + FE A ++ ML GV PD T++T+ + G +++ ++ +M C+ +++T +++++YA ++ L + AV L+ + S + + ++K RG P + T N+++ R + +A + + MK G +P TY SL+ +++R+ + + +E+ G+ YN ++ + A IF +M++S PD T+ + Y+ EA G++ MI+ G +PN S+V Y K R D+ K+F + L +DP+
Sbjct: 195 MFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAG-CKPNICTFNAFIKMYGNRGKFTEMMKIFD--EINVCGLSPDIV-TWNTLLAVFGQNGMDSEVSGVFKE---MKRAGFVPERE--TFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNS-GIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDE-AKLFVEDLR-NLDPH 801 HSP 2 Score: 179.104 bits (453), Expect = 5.741e-46 Identity = 140/583 (24.01%), Postives = 260/583 (44.60%), Query Frame = 0
Query: 158 VVLYNVTLKVFREV-RDFEGIEKLFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYC-KARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSL--------ESSNPWEQQVSTILKGIVGKISERDAIFILTKMVD----PNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQP 726
++ YNV L VF ++ + I L ++M G+ P+ T++T+IT SL ++A + FE+M++ G D + ++ Y S + AMK+ + + +++LI D + + N M G KP++ TY TLL R + A +I+E+M N+G P+ T+ A ++ Y + +F E + ++ E+ G+ D V +N L + G E S +F++MK +G P+ T+ LI+ YS ++ P +T+L + + +L +M D PN +TY L+ + ++ L +E+ ++P + T+ + S +A F ++ G D T ++M+ Y R V KA + K + T+++L+ M S + ++ K I +++ +G+KP + +YN ++ A R R A I++EM+NSG+ PD ITY + + Y E+A+G+ + M +G + YN ++ L D+A D+++ + P
Sbjct: 243 LITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTE-MMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFV-PERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNE--------------------LTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDPHAP 803 HSP 3 Score: 171.785 bits (434), Expect = 1.298e-43 Identity = 136/603 (22.55%), Postives = 266/603 (44.11%), Query Frame = 0
Query: 208 LPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGR-GRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESSNPWEQQ--------VSTILKGI--VGKISERDAIF--ILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPN 797
L +A +WF K + + DNS+ +I G A +++ + + + +D +++LI S + ++V+ M+ G KP ++TYN +L G+ G ++ E M + G +P TY L+ + ++A V+ EMK G D V YN L D+ EA ++ +M +G P TY LI+ Y+ +++E N ++ +T+L G GK+ +IF + PN + T+N + ++ F K+FDE+ G+ PD +T++T+ +G + +F++M G + T + +I +Y+R ++A+ +Y R D T++ ++ + G +++ + +M+ KP+ TY +LL A + ++ E+ + + P + +L+ V ++ +A + E++ G + N ++S+ + KA + MK P T+ LM M+SRS ++E IL E++ G++P+I ++++ Y + R D +IF+++ GI P+
Sbjct: 153 LALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNG-FSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPN--------------------ICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMK-ERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPD 733 HSP 4 Score: 136.732 bits (343), Expect = 1.492e-32 Identity = 85/319 (26.65%), Postives = 169/319 (52.98%), Query Frame = 0
Query: 496 RDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDK---AVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGN-YDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQ 810
+ F+ A + FD + + + S +AI S+ G + A +F + G D + +++I ++A + + +A+ ++ + + + + +T++ ++ +F G ++K + + MK G+ P TYN L+ R H++A ++ EMK +G S D +TY +LL+VY ++ ++A+ + EM NG + + YN L+S A G +D+A+E+ M + + +PD +T+T L++ + R+G+V A I EM +G +PNI + + YG + +++KIF+++ G+ P+ + LL V Q
Sbjct: 149 KKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQM-AEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQ 466 HSP 5 Score: 131.724 bits (330), Expect = 5.761e-31 Identity = 81/325 (24.92%), Postives = 161/325 (49.54%), Query Frame = 0
Query: 482 VITYNVTLNLFRK-SRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPND-HFCSCL 804
+ITYNV LN+F K + L ++M G+ PD T++T+ C +A ++FE+M + G D VT +A++ Y ++++ +A+++ + VT+++LI ++ G D+ + + M +G KP V TY LL RA A +I+ EM+N+G P+ T+ + +++Y + + ++ E+ G++ +N LL++ G + +F +MK + P+ TF L++ YSR G +A + M+ +G+ P++ +++ + + K+ ++ + PN+ +CS L
Sbjct: 243 LITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRA-GFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLL 566 HSP 6 Score: 118.627 bits (296), Expect = 7.593e-27 Identity = 78/325 (24.00%), Postives = 153/325 (47.08%), Query Frame = 0
Query: 487 VTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKV-DKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQ 810
+ +++ K A +F+ + G D +++++ + SG +AV +F+KM GC+ +T + ++ + + +K L + K++ DA T++ LI + + ++++MK G TYN LL ++ ++A + NEM +G SP +TY SL+ Y R ++A+ L +M G Y LLS G ++ A+ IF +M+++ C+P+ TF + MY G+ +E I +E+ GL P+I +L+ +G+ +V +F ++ G P + L++ ++
Sbjct: 178 IIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNA-GCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSR 501 HSP 7 Score: 98.5969 bits (244), Expect = 1.124e-20 Identity = 61/247 (24.70%), Postives = 120/247 (48.58%), Query Frame = 0
Query: 570 KALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDAL-GLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQTPKEE 815
+A + + + K + +D + +I M G ++ ++ G V +Y +L+ A + +R+A ++ +M+ G P ITY +L V+ + + + L ++M+ +G+ A YN L++ C +A ++F +MK++ D T+ L+ +Y +S R EA +LNEM+ +G P+I SL+ Y + D+ +++ NQ+ E G P+ + LL+ + K E
Sbjct: 156 RAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAA-GFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVE 401
BLAST of rna-XM_014663436.2 vs. Araport11
Match: AT5G02860.3 (| Pentatricopeptide repeat (PPR) superfamily protein | Chr5:654102-656561 FORWARD LENGTH=819 | 201606) HSP 1 Score: 186.808 bits (473), Expect = 1.820e-48 Identity = 147/619 (23.75%), Postives = 288/619 (46.53%), Query Frame = 0
Query: 180 LFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNA-EVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESSNPWEQQVSTILKGIVGKISERDAIFILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPN 797
+F+ + + G + ++ +++++I++ + R+AV F+KM G +P + ++ + G L ++ K++ D ++ LI C V+ +MK G + VTYN LL G+ R +A + +M+ +GFSPS TY +L+ AY + ++A+ + +M EKG D Y L G ++ A IFE+M+++G C+P+ T+ I MY + K ++ ++ + E V + IV + A+F M + +F + F ++E T+N ++ + + FE A ++ ML GV PD T++T+ + G +++ ++ +M C+ +++T +++++YA ++ L + AV L+ + S + + ++K RG P + T N+++ R + +A + + MK G +P TY SL+ +++R+ + + +E+ G+ YN ++ + A IF +M++S PD T+ + Y+ EA G++ MI+ G +PN S+V Y K R D+ K+F + L +DP+
Sbjct: 195 MFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAG-CKPNICTFNAFIKMYGNRGKFTEMMKIFD--EINVCGLSPDIV-TWNTLLAVFGQNGMDSEVSGVFKE---MKRAGFVPERE--TFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNS-GIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDE-AKLFVEDLR-NLDPH 801 HSP 2 Score: 179.104 bits (453), Expect = 5.741e-46 Identity = 140/583 (24.01%), Postives = 260/583 (44.60%), Query Frame = 0
Query: 158 VVLYNVTLKVFREV-RDFEGIEKLFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYC-KARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSL--------ESSNPWEQQVSTILKGIVGKISERDAIFILTKMVD----PNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQP 726
++ YNV L VF ++ + I L ++M G+ P+ T++T+IT SL ++A + FE+M++ G D + ++ Y S + AMK+ + + +++LI D + + N M G KP++ TY TLL R + A +I+E+M N+G P+ T+ A ++ Y + +F E + ++ E+ G+ D V +N L + G E S +F++MK +G P+ T+ LI+ YS ++ P +T+L + + +L +M D PN +TY L+ + ++ L +E+ ++P + T+ + S +A F ++ G D T ++M+ Y R V KA + K + T+++L+ M S + ++ K I +++ +G+KP + +YN ++ A R R A I++EM+NSG+ PD ITY + + Y E+A+G+ + M +G + YN ++ L D+A D+++ + P
Sbjct: 243 LITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTE-MMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFV-PERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNE--------------------LTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDPHAP 803 HSP 3 Score: 171.785 bits (434), Expect = 1.298e-43 Identity = 136/603 (22.55%), Postives = 266/603 (44.11%), Query Frame = 0
Query: 208 LPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGR-GRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESSNPWEQQ--------VSTILKGI--VGKISERDAIF--ILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPN 797
L +A +WF K + + DNS+ +I G A +++ + + + +D +++LI S + ++V+ M+ G KP ++TYN +L G+ G ++ E M + G +P TY L+ + ++A V+ EMK G D V YN L D+ EA ++ +M +G P TY LI+ Y+ +++E N ++ +T+L G GK+ +IF + PN + T+N + ++ F K+FDE+ G+ PD +T++T+ +G + +F++M G + T + +I +Y+R ++A+ +Y R D T++ ++ + G +++ + +M+ KP+ TY +LL A + ++ E+ + + P + +L+ V ++ +A + E++ G + N ++S+ + KA + MK P T+ LM M+SRS ++E IL E++ G++P+I ++++ Y + R D +IF+++ GI P+
Sbjct: 153 LALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNG-FSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPN--------------------ICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMK-ERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPD 733 HSP 4 Score: 136.732 bits (343), Expect = 1.492e-32 Identity = 85/319 (26.65%), Postives = 169/319 (52.98%), Query Frame = 0
Query: 496 RDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDK---AVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGN-YDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQ 810
+ F+ A + FD + + + S +AI S+ G + A +F + G D + +++I ++A + + +A+ ++ + + + + +T++ ++ +F G ++K + + MK G+ P TYN L+ R H++A ++ EMK +G S D +TY +LL+VY ++ ++A+ + EM NG + + YN L+S A G +D+A+E+ M + + +PD +T+T L++ + R+G+V A I EM +G +PNI + + YG + +++KIF+++ G+ P+ + LL V Q
Sbjct: 149 KKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQM-AEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQ 466 HSP 5 Score: 131.724 bits (330), Expect = 5.761e-31 Identity = 81/325 (24.92%), Postives = 161/325 (49.54%), Query Frame = 0
Query: 482 VITYNVTLNLFRK-SRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPND-HFCSCL 804
+ITYNV LN+F K + L ++M G+ PD T++T+ C +A ++FE+M + G D VT +A++ Y ++++ +A+++ + VT+++LI ++ G D+ + + M +G KP V TY LL RA A +I+ EM+N+G P+ T+ + +++Y + + ++ E+ G++ +N LL++ G + +F +MK + P+ TF L++ YSR G +A + M+ +G+ P++ +++ + + K+ ++ + PN+ +CS L
Sbjct: 243 LITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRA-GFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLL 566 HSP 6 Score: 118.627 bits (296), Expect = 7.593e-27 Identity = 78/325 (24.00%), Postives = 153/325 (47.08%), Query Frame = 0
Query: 487 VTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKV-DKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQ 810
+ +++ K A +F+ + G D +++++ + SG +AV +F+KM GC+ +T + ++ + + +K L + K++ DA T++ LI + + ++++MK G TYN LL ++ ++A + NEM +G SP +TY SL+ Y R ++A+ L +M G Y LLS G ++ A+ IF +M+++ C+P+ TF + MY G+ +E I +E+ GL P+I +L+ +G+ +V +F ++ G P + L++ ++
Sbjct: 178 IIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNA-GCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSR 501 HSP 7 Score: 98.5969 bits (244), Expect = 1.124e-20 Identity = 61/247 (24.70%), Postives = 120/247 (48.58%), Query Frame = 0
Query: 570 KALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDAL-GLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQTPKEE 815
+A + + + K + +D + +I M G ++ ++ G V +Y +L+ A + +R+A ++ +M+ G P ITY +L V+ + + + L ++M+ +G+ A YN L++ C +A ++F +MK++ D T+ L+ +Y +S R EA +LNEM+ +G P+I SL+ Y + D+ +++ NQ+ E G P+ + LL+ + K E
Sbjct: 156 RAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAA-GFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVE 401
BLAST of rna-XM_014663436.2 vs. Araport11
Match: AT5G02860.2 (| Pentatricopeptide repeat (PPR) superfamily protein | Chr5:654102-656561 FORWARD LENGTH=819 | 201606) HSP 1 Score: 186.808 bits (473), Expect = 1.820e-48 Identity = 147/619 (23.75%), Postives = 288/619 (46.53%), Query Frame = 0
Query: 180 LFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNA-EVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESSNPWEQQVSTILKGIVGKISERDAIFILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPN 797
+F+ + + G + ++ +++++I++ + R+AV F+KM G +P + ++ + G L ++ K++ D ++ LI C V+ +MK G + VTYN LL G+ R +A + +M+ +GFSPS TY +L+ AY + ++A+ + +M EKG D Y L G ++ A IFE+M+++G C+P+ T+ I MY + K ++ ++ + E V + IV + A+F M + +F + F ++E T+N ++ + + FE A ++ ML GV PD T++T+ + G +++ ++ +M C+ +++T +++++YA ++ L + AV L+ + S + + ++K RG P + T N+++ R + +A + + MK G +P TY SL+ +++R+ + + +E+ G+ YN ++ + A IF +M++S PD T+ + Y+ EA G++ MI+ G +PN S+V Y K R D+ K+F + L +DP+
Sbjct: 195 MFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAG-CKPNICTFNAFIKMYGNRGKFTEMMKIFD--EINVCGLSPDIV-TWNTLLAVFGQNGMDSEVSGVFKE---MKRAGFVPERE--TFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNS-GIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDE-AKLFVEDLR-NLDPH 801 HSP 2 Score: 179.104 bits (453), Expect = 5.741e-46 Identity = 140/583 (24.01%), Postives = 260/583 (44.60%), Query Frame = 0
Query: 158 VVLYNVTLKVFREV-RDFEGIEKLFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYC-KARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSL--------ESSNPWEQQVSTILKGIVGKISERDAIFILTKMVD----PNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQP 726
++ YNV L VF ++ + I L ++M G+ P+ T++T+IT SL ++A + FE+M++ G D + ++ Y S + AMK+ + + +++LI D + + N M G KP++ TY TLL R + A +I+E+M N+G P+ T+ A ++ Y + +F E + ++ E+ G+ D V +N L + G E S +F++MK +G P+ T+ LI+ YS ++ P +T+L + + +L +M D PN +TY L+ + ++ L +E+ ++P + T+ + S +A F ++ G D T ++M+ Y R V KA + K + T+++L+ M S + ++ K I +++ +G+KP + +YN ++ A R R A I++EM+NSG+ PD ITY + + Y E+A+G+ + M +G + YN ++ L D+A D+++ + P
Sbjct: 243 LITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTE-MMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFV-PERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNE--------------------LTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDPHAP 803 HSP 3 Score: 171.785 bits (434), Expect = 1.298e-43 Identity = 136/603 (22.55%), Postives = 266/603 (44.11%), Query Frame = 0
Query: 208 LPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGR-GRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESSNPWEQQ--------VSTILKGI--VGKISERDAIF--ILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPN 797
L +A +WF K + + DNS+ +I G A +++ + + + +D +++LI S + ++V+ M+ G KP ++TYN +L G+ G ++ E M + G +P TY L+ + ++A V+ EMK G D V YN L D+ EA ++ +M +G P TY LI+ Y+ +++E N ++ +T+L G GK+ +IF + PN + T+N + ++ F K+FDE+ G+ PD +T++T+ +G + +F++M G + T + +I +Y+R ++A+ +Y R D T++ ++ + G +++ + +M+ KP+ TY +LL A + ++ E+ + + P + +L+ V ++ +A + E++ G + N ++S+ + KA + MK P T+ LM M+SRS ++E IL E++ G++P+I ++++ Y + R D +IF+++ GI P+
Sbjct: 153 LALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNG-FSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPN--------------------ICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMK-ERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPD 733 HSP 4 Score: 136.732 bits (343), Expect = 1.492e-32 Identity = 85/319 (26.65%), Postives = 169/319 (52.98%), Query Frame = 0
Query: 496 RDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDK---AVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGN-YDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQ 810
+ F+ A + FD + + + S +AI S+ G + A +F + G D + +++I ++A + + +A+ ++ + + + + +T++ ++ +F G ++K + + MK G+ P TYN L+ R H++A ++ EMK +G S D +TY +LL+VY ++ ++A+ + EM NG + + YN L+S A G +D+A+E+ M + + +PD +T+T L++ + R+G+V A I EM +G +PNI + + YG + +++KIF+++ G+ P+ + LL V Q
Sbjct: 149 KKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQM-AEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQ 466 HSP 5 Score: 131.724 bits (330), Expect = 5.761e-31 Identity = 81/325 (24.92%), Postives = 161/325 (49.54%), Query Frame = 0
Query: 482 VITYNVTLNLFRK-SRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPND-HFCSCL 804
+ITYNV LN+F K + L ++M G+ PD T++T+ C +A ++FE+M + G D VT +A++ Y ++++ +A+++ + VT+++LI ++ G D+ + + M +G KP V TY LL RA A +I+ EM+N+G P+ T+ + +++Y + + ++ E+ G++ +N LL++ G + +F +MK + P+ TF L++ YSR G +A + M+ +G+ P++ +++ + + K+ ++ + PN+ +CS L
Sbjct: 243 LITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRA-GFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLL 566 HSP 6 Score: 118.627 bits (296), Expect = 7.593e-27 Identity = 78/325 (24.00%), Postives = 153/325 (47.08%), Query Frame = 0
Query: 487 VTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKV-DKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQ 810
+ +++ K A +F+ + G D +++++ + SG +AV +F+KM GC+ +T + ++ + + +K L + K++ DA T++ LI + + ++++MK G TYN LL ++ ++A + NEM +G SP +TY SL+ Y R ++A+ L +M G Y LLS G ++ A+ IF +M+++ C+P+ TF + MY G+ +E I +E+ GL P+I +L+ +G+ +V +F ++ G P + L++ ++
Sbjct: 178 IIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNA-GCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSR 501 HSP 7 Score: 98.5969 bits (244), Expect = 1.124e-20 Identity = 61/247 (24.70%), Postives = 120/247 (48.58%), Query Frame = 0
Query: 570 KALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDAL-GLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQTPKEE 815
+A + + + K + +D + +I M G ++ ++ G V +Y +L+ A + +R+A ++ +M+ G P ITY +L V+ + + + L ++M+ +G+ A YN L++ C +A ++F +MK++ D T+ L+ +Y +S R EA +LNEM+ +G P+I SL+ Y + D+ +++ NQ+ E G P+ + LL+ + K E
Sbjct: 156 RAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAA-GFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVE 401
BLAST of rna-XM_014663436.2 vs. Araport11
Match: AT5G02860.1 (| Pentatricopeptide repeat (PPR) superfamily protein | Chr5:654102-656561 FORWARD LENGTH=819 | 201606) HSP 1 Score: 186.808 bits (473), Expect = 1.820e-48 Identity = 147/619 (23.75%), Postives = 288/619 (46.53%), Query Frame = 0
Query: 180 LFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNA-EVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESSNPWEQQVSTILKGIVGKISERDAIFILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPN 797
+F+ + + G + ++ +++++I++ + R+AV F+KM G +P + ++ + G L ++ K++ D ++ LI C V+ +MK G + VTYN LL G+ R +A + +M+ +GFSPS TY +L+ AY + ++A+ + +M EKG D Y L G ++ A IFE+M+++G C+P+ T+ I MY + K ++ ++ + E V + IV + A+F M + +F + F ++E T+N ++ + + FE A ++ ML GV PD T++T+ + G +++ ++ +M C+ +++T +++++YA ++ L + AV L+ + S + + ++K RG P + T N+++ R + +A + + MK G +P TY SL+ +++R+ + + +E+ G+ YN ++ + A IF +M++S PD T+ + Y+ EA G++ MI+ G +PN S+V Y K R D+ K+F + L +DP+
Sbjct: 195 MFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAG-CKPNICTFNAFIKMYGNRGKFTEMMKIFD--EINVCGLSPDIV-TWNTLLAVFGQNGMDSEVSGVFKE---MKRAGFVPERE--TFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNS-GIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDE-AKLFVEDLR-NLDPH 801 HSP 2 Score: 179.104 bits (453), Expect = 5.741e-46 Identity = 140/583 (24.01%), Postives = 260/583 (44.60%), Query Frame = 0
Query: 158 VVLYNVTLKVFREV-RDFEGIEKLFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYC-KARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSL--------ESSNPWEQQVSTILKGIVGKISERDAIFILTKMVD----PNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQP 726
++ YNV L VF ++ + I L ++M G+ P+ T++T+IT SL ++A + FE+M++ G D + ++ Y S + AMK+ + + +++LI D + + N M G KP++ TY TLL R + A +I+E+M N+G P+ T+ A ++ Y + +F E + ++ E+ G+ D V +N L + G E S +F++MK +G P+ T+ LI+ YS ++ P +T+L + + +L +M D PN +TY L+ + ++ L +E+ ++P + T+ + S +A F ++ G D T ++M+ Y R V KA + K + T+++L+ M S + ++ K I +++ +G+KP + +YN ++ A R R A I++EM+NSG+ PD ITY + + Y E+A+G+ + M +G + YN ++ L D+A D+++ + P
Sbjct: 243 LITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTE-MMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFV-PERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNE--------------------LTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDPHAP 803 HSP 3 Score: 171.785 bits (434), Expect = 1.298e-43 Identity = 136/603 (22.55%), Postives = 266/603 (44.11%), Query Frame = 0
Query: 208 LPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGR-GRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESSNPWEQQ--------VSTILKGI--VGKISERDAIF--ILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPN 797
L +A +WF K + + DNS+ +I G A +++ + + + +D +++LI S + ++V+ M+ G KP ++TYN +L G+ G ++ E M + G +P TY L+ + ++A V+ EMK G D V YN L D+ EA ++ +M +G P TY LI+ Y+ +++E N ++ +T+L G GK+ +IF + PN + T+N + ++ F K+FDE+ G+ PD +T++T+ +G + +F++M G + T + +I +Y+R ++A+ +Y R D T++ ++ + G +++ + +M+ KP+ TY +LL A + ++ E+ + + P + +L+ V ++ +A + E++ G + N ++S+ + KA + MK P T+ LM M+SRS ++E IL E++ G++P+I ++++ Y + R D +IF+++ GI P+
Sbjct: 153 LALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNG-FSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPN--------------------ICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMK-ERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPD 733 HSP 4 Score: 136.732 bits (343), Expect = 1.492e-32 Identity = 85/319 (26.65%), Postives = 169/319 (52.98%), Query Frame = 0
Query: 496 RDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDK---AVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGN-YDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQ 810
+ F+ A + FD + + + S +AI S+ G + A +F + G D + +++I ++A + + +A+ ++ + + + + +T++ ++ +F G ++K + + MK G+ P TYN L+ R H++A ++ EMK +G S D +TY +LL+VY ++ ++A+ + EM NG + + YN L+S A G +D+A+E+ M + + +PD +T+T L++ + R+G+V A I EM +G +PNI + + YG + +++KIF+++ G+ P+ + LL V Q
Sbjct: 149 KKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQM-AEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQ 466 HSP 5 Score: 131.724 bits (330), Expect = 5.761e-31 Identity = 81/325 (24.92%), Postives = 161/325 (49.54%), Query Frame = 0
Query: 482 VITYNVTLNLFRK-SRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPND-HFCSCL 804
+ITYNV LN+F K + L ++M G+ PD T++T+ C +A ++FE+M + G D VT +A++ Y ++++ +A+++ + VT+++LI ++ G D+ + + M +G KP V TY LL RA A +I+ EM+N+G P+ T+ + +++Y + + ++ E+ G++ +N LL++ G + +F +MK + P+ TF L++ YSR G +A + M+ +G+ P++ +++ + + K+ ++ + PN+ +CS L
Sbjct: 243 LITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRA-GFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLL 566 HSP 6 Score: 118.627 bits (296), Expect = 7.593e-27 Identity = 78/325 (24.00%), Postives = 153/325 (47.08%), Query Frame = 0
Query: 487 VTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKV-DKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQ 810
+ +++ K A +F+ + G D +++++ + SG +AV +F+KM GC+ +T + ++ + + +K L + K++ DA T++ LI + + ++++MK G TYN LL ++ ++A + NEM +G SP +TY SL+ Y R ++A+ L +M G Y LLS G ++ A+ IF +M+++ C+P+ TF + MY G+ +E I +E+ GL P+I +L+ +G+ +V +F ++ G P + L++ ++
Sbjct: 178 IIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNA-GCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSR 501 HSP 7 Score: 98.5969 bits (244), Expect = 1.124e-20 Identity = 61/247 (24.70%), Postives = 120/247 (48.58%), Query Frame = 0
Query: 570 KALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDAL-GLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQTPKEE 815
+A + + + K + +D + +I M G ++ ++ G V +Y +L+ A + +R+A ++ +M+ G P ITY +L V+ + + + L ++M+ +G+ A YN L++ C +A ++F +MK++ D T+ L+ +Y +S R EA +LNEM+ +G P+I SL+ Y + D+ +++ NQ+ E G P+ + LL+ + K E
Sbjct: 156 RAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAA-GFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVE 401
BLAST of rna-XM_014663436.2 vs. Araport11
Match: AT1G63080.3 (| Pentatricopeptide repeat (PPR) superfamily protein | Chr1:23388884-23390728 REVERSE LENGTH=614 | 201606) HSP 1 Score: 181.8 bits (460), Expect = 8.578e-48 Identity = 138/575 (24.00%), Postives = 260/575 (45.22%), Query Frame = 0
Query: 180 LFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESSNPWEQQVSTILKGIVGKISERDAIFILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEM 754
LF EM++ P+I+ FS ++++ + + + EKM GV + + MI A+ + + + ++L+ +++ + M +G +P+ VT+ TL++ + + +A +A A+ E M+ G P TY A++ CK + AL + +M++ ++ D V+Y+ + D +D+A +F +M + G +PD FTY+ LI+ ++ + SD+ S +L + L + ++PN V+T+N ++ F K AEKLFDEM+ R + P+ +T++++ + D+A ++F M S C D VT + +I + + KV +EL+ + VT++ LI F A + D ++++ M GV P++ TYN LL + + +A ++ ++ S + PD TY + E +A ED L+ + GV YN ++S G ++A +F MK + PDS T+ L+ + R G + + ++ EM
Sbjct: 52 LFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGI-RPDVFTYSSLISCLCNYGRWSDA-----------SRLLSDM------------LERKINPN--------------------VVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKE-DGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581 HSP 2 Score: 156.762 bits (395), Expect = 1.507e-39 Identity = 127/533 (23.83%), Postives = 234/533 (43.90%), Query Frame = 0
Query: 266 FSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESSNPWEQQVSTILKGIVGKISERDAIFILTKMVDPNTALFVLRYFH-SKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPN 797
FS L+ + FD +S M++LGV N+ TYN ++ + R + A AI M+ G+ PS T +LL +C +A+ + +M E G D V + L EA + E M G CQPD TY +IN L K +P+ AL +L KI + +V+ Y+ ++ K R + A LF EM +G++PD T+S++ C G A L M + VT +++I ++A+ K+ +A +L+ + VT+++LI F + D+ I+ M + P V TYN L+ +A+ ++ +M G+ + +TY +L+ + +A ++A ++K+M +GV+ YN LL G ++KA+ +F ++ S+ +PD +T+ + ++G+V + + + G++P++ +++ + K ++ +F ++ E G P+
Sbjct: 68 FSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG-CQPDLVTYGAVING----------------------------------------LCKRGEPDLALNLLNKMEKGKI----EADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKM-EPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPD 554 HSP 3 Score: 156.377 bits (394), Expect = 1.963e-39 Identity = 128/539 (23.75%), Postives = 236/539 (43.78%), Query Frame = 0
Query: 129 VFILNVMVN------PTTALLALEHFQQKINPAKHVVLYNVTLKVFREVRDFEGIEKLFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESSNPWEQQVSTILKGIVGKISERDAIFILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYA 661
++ N+M+N + LA+ K+ +V N L F L D+M++ G P+ +TF+T++ + +AV E+M G +PD + +I G ++A+ L ++ + K D ++S +I + + D L+++ +M G++P++ TY++L+ + R DA + DML +P+ T+ +L+ A+ K +A ++ EM ++ +D + V YN L + LDEA +IF M S C PD TY LIN + K D +E + +G+VG NT +TY ++ F ++ D + A+ +F +M+ GV P+ +T++T+ +G +KA+ +FE + E D T + M + KV+ +L+ + + D + ++ +I F G ++ ++ MK G P TYN L+ A LR + + + EM++ + D TY
Sbjct: 100 LYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSK-DCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSR------RGLVG-----------------NT--------------------VTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYG 594 HSP 4 Score: 132.109 bits (331), Expect = 1.618e-31 Identity = 88/334 (26.35%), Postives = 161/334 (48.20%), Query Frame = 0
Query: 482 VITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQTPKEE 815
++T N LN F A L D+M+ G +PD +TF+T+ +AV L E+M GC+ D VT A+I + + D AL L + + K D V +S +I + D L ++ +M +G++P V TY++L+ + A + ++M ++P+ +T+ SL++ + + +A L+ EM ++ YN L++ +D+A +IF M S + C PD T+ L+ + ++ +V + + +M + GL N T+L+H + + D+ +F Q++ G+ PN + LL+ L + K E
Sbjct: 135 IVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD-CLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLE 467 HSP 5 Score: 108.612 bits (270), Expect = 5.718e-24 Identity = 73/332 (21.99%), Postives = 152/332 (45.78%), Query Frame = 0
Query: 482 VITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQTPK 813
++ ++ L+ K + F+ ++M GV + T++ M C A+ + KM G VT ++++ + N++ +A+ L + ++ D VTF+ L+ + + + + M V+G +P + TY ++ + + A + N+M+ + D + Y+++++ + +DAL L+ EM G+ Y+ L+S + G A + DM + P+ TF L+ +++ G++ EAE + +EMIQ + PNI SL++ + R D+ +IF ++ P+ + L+N + K
Sbjct: 65 IVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERK-INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKK 395 HSP 6 Score: 106.686 bits (265), Expect = 2.413e-23 Identity = 76/335 (22.69%), Postives = 156/335 (46.57%), Query Frame = 0
Query: 465 FVLR-YFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTM-AICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPN 797
F LR + S +++ +E ++ N L+L + A LF EM+ P + FS + + A + F D + EKM G + T + MI R +++ AL + G+ + VT ++L+ F + + + M G +P T+ L+ + + +A + M G PD +TY +++ + + AL L +M+ + +Y+ ++ ++D A+ +F +M ++ +PD +T++ L++ GR S+A +L++M++ + PN+ SL+ + K + + K+F+++++ IDPN
Sbjct: 17 FCLRGIYFSGLSYDGYREKLSRNALLHL-----KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKF-DLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEM-DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344 HSP 7 Score: 73.1738 bits (178), Expect = 7.358e-13 Identity = 58/231 (25.11%), Postives = 109/231 (47.19%), Query Frame = 0
Query: 158 VVLYNVTLKVFREVRDFEGIEKLFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIK-TCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEA 387
VV YN + F + + +LF +M +RG+ N +T++T+I S A F++M S GV P+ + ++ +G E AM +++ + K D ++ + + C + DG ++ + + GVKP+++ YNT++ + +A ++ M G P TY L++A+ + + + + +EM+ DA Y L+ DM D G LD+
Sbjct: 380 VVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDG-WDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHD-GRLDKG 608
BLAST of rna-XM_014663436.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3VL35|A0A1S3VL35_VIGRR (pentatricopeptide repeat-containing protein At4g16390, chloroplastic-like OS=Vigna radiata var. radiata OX=3916 GN=LOC106776108 PE=3 SV=1) HSP 1 Score: 2128.21 bits (5513), Expect = 0.000e+0 Identity = 1020/1020 (100.00%), Postives = 1020/1020 (100.00%), Query Frame = 0
Query: 1 MAQPHPLCSSHCSTYSFSFHSGKPFIIIPSRSKTLLSAPPRFSSAQPFNTLRDAKLDDPDAKSSSLSKNSIWVNPKSSRVKQLWKNSPQTRSSFLSKLAKSLDSCNPTNEHVFQILDVLGDNILERDAVFILNVMVNPTTALLALEHFQQKINPAKHVVLYNVTLKVFREVRDFEGIEKLFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESSNPWEQQVSTILKGIVGKISERDAIFILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQTPKEEFGKLTDCIEKANPKLGTAIRYLVEGKEGNGDFRKETVELLNSFHAEVKKPLCNCLIDLCVKLNVPERACDLLDLGLMLEIYTDIQSRSQNQWSLHLKELSVGAAMTALHVWINDLSRELESGKDLPPLLGINTGQGKHKYSDKGLATVFESHLKELNAPFYEASDNPGWFLVTKPAAISWLESRVSTESIASLNTLALGVPAMAL 1020
MAQPHPLCSSHCSTYSFSFHSGKPFIIIPSRSKTLLSAPPRFSSAQPFNTLRDAKLDDPDAKSSSLSKNSIWVNPKSSRVKQLWKNSPQTRSSFLSKLAKSLDSCNPTNEHVFQILDVLGDNILERDAVFILNVMVNPTTALLALEHFQQKINPAKHVVLYNVTLKVFREVRDFEGIEKLFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESSNPWEQQVSTILKGIVGKISERDAIFILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQTPKEEFGKLTDCIEKANPKLGTAIRYLVEGKEGNGDFRKETVELLNSFHAEVKKPLCNCLIDLCVKLNVPERACDLLDLGLMLEIYTDIQSRSQNQWSLHLKELSVGAAMTALHVWINDLSRELESGKDLPPLLGINTGQGKHKYSDKGLATVFESHLKELNAPFYEASDNPGWFLVTKPAAISWLESRVSTESIASLNTLALGVPAMAL
Sbjct: 1 MAQPHPLCSSHCSTYSFSFHSGKPFIIIPSRSKTLLSAPPRFSSAQPFNTLRDAKLDDPDAKSSSLSKNSIWVNPKSSRVKQLWKNSPQTRSSFLSKLAKSLDSCNPTNEHVFQILDVLGDNILERDAVFILNVMVNPTTALLALEHFQQKINPAKHVVLYNVTLKVFREVRDFEGIEKLFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESSNPWEQQVSTILKGIVGKISERDAIFILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQTPKEEFGKLTDCIEKANPKLGTAIRYLVEGKEGNGDFRKETVELLNSFHAEVKKPLCNCLIDLCVKLNVPERACDLLDLGLMLEIYTDIQSRSQNQWSLHLKELSVGAAMTALHVWINDLSRELESGKDLPPLLGINTGQGKHKYSDKGLATVFESHLKELNAPFYEASDNPGWFLVTKPAAISWLESRVSTESIASLNTLALGVPAMAL 1020
BLAST of rna-XM_014663436.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9VE60|A0A0L9VE60_PHAAN (Smr domain-containing protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan09g200400 PE=3 SV=1) HSP 1 Score: 2060.03 bits (5336), Expect = 0.000e+0 Identity = 988/1020 (96.86%), Postives = 1000/1020 (98.04%), Query Frame = 0
Query: 1 MAQPHPLCSSHCSTYSFSFHSGKPFIIIPSRSKTLLSAPPRFSSAQPFNTLRDAKLDDPDAKSSSLSKNSIWVNPKSSRVKQLWKNSPQTRSSFLSKLAKSLDSCNPTNEHVFQILDVLGDNILERDAVFILNVMVNPTTALLALEHFQQKINPAKHVVLYNVTLKVFREVRDFEGIEKLFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESSNPWEQQVSTILKGIVGKISERDAIFILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQTPKEEFGKLTDCIEKANPKLGTAIRYLVEGKEGNGDFRKETVELLNSFHAEVKKPLCNCLIDLCVKLNVPERACDLLDLGLMLEIYTDIQSRSQNQWSLHLKELSVGAAMTALHVWINDLSRELESGKDLPPLLGINTGQGKHKYSDKGLATVFESHLKELNAPFYEASDNPGWFLVTKPAAISWLESRVSTESIASLNTLALGVPAMAL 1020
MA PHPLCSS CSTYSFSFHSGKPFIIIPSRSKTLL APPRFSSAQPFNTLRDAKLDDP AKSSSLSKNSIWVNPKSSR KQ WK SPQTRSSFLSKLAKSLDSCNPTNEHV QILDVLGDNILERDAVFILNVMVNPTTALLAL HFQQKINPAKHVVLYNVTLKVFREVRDFEGIEKLFDEMLQRGVNPNIITFSTIITSA+MCSLPRKAVEWFEKM SFGVEPDNS+FLFMIRAYASSGNAE+AMKLY RAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKP+MVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDN TYACLINMYSSHLKHSDSLESSNPWEQQVSTILKGIVGKISERDAIFIL+KMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAE LFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDD+TSSAMIY YARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKV GVKPS+ATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEM+GNGVNVT+DLYNKLLSMCADLGYIDKAVEIFYDMKSS SCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGK KRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQ PKEE GKLTDCIEKANPKLGTA+RYLVEGKEGNGDFRKETVELLNSFHAEVKKPLCNCLIDLCVKLNVPERACDLLDLGLMLEIYTDIQSRSQNQWSLHLKELSVGAAMTALHVWINDLSRELESGKDLPPLLGINTGQGKHKYSDKGLATVFESHLKELNAPFYEA+DNPGWFLVTKPAAISWL+SR STESIASLNTLALGVPAMAL
Sbjct: 1 MAHPHPLCSSRCSTYSFSFHSGKPFIIIPSRSKTLLPAPPRFSSAQPFNTLRDAKLDDPAAKSSSLSKNSIWVNPKSSRAKQRWKISPQTRSSFLSKLAKSLDSCNPTNEHVSQILDVLGDNILERDAVFILNVMVNPTTALLALGHFQQKINPAKHVVLYNVTLKVFREVRDFEGIEKLFDEMLQRGVNPNIITFSTIITSATMCSLPRKAVEWFEKMHSFGVEPDNSIFLFMIRAYASSGNAEMAMKLYYRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPSMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNLTYACLINMYSSHLKHSDSLESSNPWEQQVSTILKGIVGKISERDAIFILSKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAENLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDITSSAMIYGYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVLGVKPSMATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMKGNGVNVTSDLYNKLLSMCADLGYIDKAVEIFYDMKSSGSCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKVKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQAPKEELGKLTDCIEKANPKLGTAVRYLVEGKEGNGDFRKETVELLNSFHAEVKKPLCNCLIDLCVKLNVPERACDLLDLGLMLEIYTDIQSRSQNQWSLHLKELSVGAAMTALHVWINDLSRELESGKDLPPLLGINTGQGKHKYSDKGLATVFESHLKELNAPFYEAADNPGWFLVTKPAAISWLQSRGSTESIASLNTLALGVPAMAL 1020
BLAST of rna-XM_014663436.2 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6KKX6|A0A4D6KKX6_VIGUN (Structure-specific endonuclease subunit SLX1 OS=Vigna unguiculata OX=3917 GN=DEO72_LG1g862 PE=3 SV=1) HSP 1 Score: 1958.34 bits (5072), Expect = 0.000e+0 Identity = 940/1020 (92.16%), Postives = 971/1020 (95.20%), Query Frame = 0
Query: 1 MAQPHPLCSSHCSTYSFSFHSGKPFIIIPSRSKTLLSAPPRFSSAQPFNTLRDAKLDDPDAKSSSLSKNSIWVNPKSSRVKQLWKNSPQTRSSFLSKLAKSLDSCNPTNEHVFQILDVLGDNILERDAVFILNVMVNPTTALLALEHFQQKINPAKHVVLYNVTLKVFREVRDFEGIEKLFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESSNPWEQQVSTILKGIVGKISERDAIFILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQTPKEEFGKLTDCIEKANPKLGTAIRYLVEGKEGNGDFRKETVELLNSFHAEVKKPLCNCLIDLCVKLNVPERACDLLDLGLMLEIYTDIQSRSQNQWSLHLKELSVGAAMTALHVWINDLSRELESGKDLPPLLGINTGQGKHKYSDKGLATVFESHLKELNAPFYEASDNPGWFLVTKPAAISWLESRVSTESIASLNTLALGVPAMAL 1020
MAQPHPLCSSHCSTYSFSFHSGKPFII+PSRSK LL APPRFSSAQPFNTLRDA +DPDAKSSSLSKNSIWVNPKSSR KQLWK SP+ RSSFLSKLAKSLDSCNPTNEHV QILDVLGDNI ERDAVFIL+VMVNPT ALLALE+FQQKINP KHVVLYNVTLKVFREVRDFEG EKLF EM+QRGV+PNIITFSTII+SASMCS+PRKAVEWFEKM SFGVEPDNS+F FMIRAYASSGNAE+AMKLYDRAKAEKW VDTGVFSALIKTCGI ENFDGCLSVYNDMKVLGVKPNM+T+NTLLYAMGR RRALDAKAIYE+M+NSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDN TYA LINMYSSHLKHSDSLES NPWEQQVSTILKGIV KISE DAIFIL+KMVDPNTALFVLRYF SKINFTRDKEVI+YNVTLNLFRKSRDFEGAE LFDEMLYRGVK DNITFSTM CASV G PDKAVELFEKM SFG ERD +TSSAMIY+YARTNKVDKALELY RAKAEKWR+DA+TFS LIKMFSVAGNYDKCLIIYQDMKV GVKPSV TYNNLLGAMLRARNHRQAKTIYNEMKNSG+SPDFITYASLLEVYTRALCGEDA GLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSS SCQPDSWTFTFL+TMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLV CYGK KRTDDVVK+FNQLLELGIDPNDHFCSCLL+VLTQTPKEE GKLTDCIEKANPKLGT +RYLVEGKEGNGDFRKETVELLNSFHAEVKKPLCNCLIDLCVKLNVPERACD+LDLGLMLEIYTDIQSRSQNQWSLHLKELSVGAAMTALHVWINDLSR LES +DLPPLLGINTGQGKHKYSDKGLATV ESHLKEL+APFYEASDNPGWFLVTK AA SWL+SR STESIASLNTLALGVPA+AL
Sbjct: 1 MAQPHPLCSSHCSTYSFSFHSGKPFIIVPSRSKALLPAPPRFSSAQPFNTLRDA--NDPDAKSSSLSKNSIWVNPKSSRAKQLWKISPRARSSFLSKLAKSLDSCNPTNEHVSQILDVLGDNIFERDAVFILDVMVNPTIALLALEYFQQKINPVKHVVLYNVTLKVFREVRDFEGAEKLFGEMVQRGVHPNIITFSTIISSASMCSMPRKAVEWFEKMHSFGVEPDNSIFSFMIRAYASSGNAEMAMKLYDRAKAEKWSVDTGVFSALIKTCGILENFDGCLSVYNDMKVLGVKPNMLTFNTLLYAMGRARRALDAKAIYEEMINSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNLTYAYLINMYSSHLKHSDSLESRNPWEQQVSTILKGIVDKISEGDAIFILSKMVDPNTALFVLRYFQSKINFTRDKEVISYNVTLNLFRKSRDFEGAEALFDEMLYRGVKLDNITFSTMVNCASVCGLPDKAVELFEKMSSFGFERDGITSSAMIYAYARTNKVDKALELYDRAKAEKWRIDALTFSTLIKMFSVAGNYDKCLIIYQDMKVLGVKPSVVTYNNLLGAMLRARNHRQAKTIYNEMKNSGISPDFITYASLLEVYTRALCGEDAFGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSGSCQPDSWTFTFLITMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVQCYGKVKRTDDVVKVFNQLLELGIDPNDHFCSCLLSVLTQTPKEEAGKLTDCIEKANPKLGTVVRYLVEGKEGNGDFRKETVELLNSFHAEVKKPLCNCLIDLCVKLNVPERACDILDLGLMLEIYTDIQSRSQNQWSLHLKELSVGAAMTALHVWINDLSRALESEEDLPPLLGINTGQGKHKYSDKGLATVVESHLKELDAPFYEASDNPGWFLVTKTAAESWLQSRGSTESIASLNTLALGVPAVAL 1018
BLAST of rna-XM_014663436.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445GS85|A0A445GS85_GLYSO (Pentatricopeptide repeat-containing protein, chloroplastic OS=Glycine soja OX=3848 GN=D0Y65_040650 PE=3 SV=1) HSP 1 Score: 1658.66 bits (4294), Expect = 0.000e+0 Identity = 800/1020 (78.43%), Postives = 887/1020 (86.96%), Query Frame = 0
Query: 1 MAQPHPLCSSHCSTYSFSFHSGKPFIIIPSRSKTLLSAPPRFSSAQPFNTLRDAKLDDPDAKSSSLSKNSIWVNPKSSRVKQLWKNSPQTRSSFLSKLAKSLDSCNPTNEHVFQILDVLGDNILERDAVFILNVMVNPTTALLALEHFQQKINPAKHVVLYNVTLKVFREVRDFEGIEKLFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESSNPWEQQVSTILKGIVGKISERDAIFILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQTPKEEFGKLTDCIEKANPKLGTAIRYLVEGKEGNGDFRKETVELLNSFHAEVKKPLCNCLIDLCVKLNVPERACDLLDLGLMLEIYTDIQSRSQNQWSLHLKELSVGAAMTALHVWINDLSRELESGKDLPPLLGINTGQGKHKYSDKGLATVFESHLKELNAPFYEASDNPGWFLVTKPAAISWLESRVSTESIASLNTLALGVPAMAL 1020
MAQP+PLC S ++ F I+PS SKTLL AP RFS QP NTL+DAKLDDPDAKS SLSKNSIWVNP+S R K L KNSP RSS L+KLAKSLDSCNPT +HV +IL+VL DN+ ERDAVFILN MVNP TALLAL++FQ KINPAKHVVLYNVTLKV REV+DFEG EKLFDEMLQRGV PN+ITFSTII+SAS+CSLP KA++WFEKM SFGVEPD S+ FMI AYA SG A++A++LYDRAKAEKWRVDT FS LIK CG+ ENFDGCLSVYNDMKVLG KPNMVTYNTLLYAMGR +RALDAKAIYE+M+++GFSP+W T+AALLQAYCKARF EDALGVY+EMK+KGMDV+ LYNLLFDMCADVGC+DEA EIFEDMKSSGTCQPDNFTY+CLINMYSSHLK +DSLESSNPWEQQVSTILKG+ +SE D IFIL +MVDPNTA FVLRYF + +NFTRDKEVI YNV +NLFRKSRDFEGAEKLFDEML RGVKPDNITFST+ CAS+SG P+KAVELFEKM FGCE D +T S M+Y+YARTN VDKA+ LY RAKAE W +DAVTFS LIKM+S+AGNYDKCL +YQ+MKV GVKP+VATYN LLGAMLR++ HRQAK I+ EMK++GVSPDFITYASLLEVYTRA C EDALG+YKEM+GNG+N+TADLYNKLL+MCAD+GY D+AVEIFY+MKSS +CQPDSWTF+ L+T+YSRSG+VSE EG+LNEMIQSG QP IFVMTSL+ CYGK KRTDDVVKIF QLL+LGI PNDHFC CLLNVLTQTPKEE GKLTDCIEKAN KLGT +RYLVE +E + FRKET+ELLNS AEVKKPLCNCLIDLCVKLNVPERAC LLDLGLMLEIY +IQS+SQ QWSLHLKELSVGAAMTALHVWINDLS LESG+DLPPLLGINTGQGKHKYSDKGLA+VFES LKELNAPF+EA GWFLVTK AA WLESR STESIA LN L L VP MAL
Sbjct: 1 MAQPYPLCPSPSASSFSFHSRIPFFTIVPSHSKTLLHAP-RFS-LQPVNTLQDAKLDDPDAKSPSLSKNSIWVNPRSPRAKHLQKNSPHARSSSLTKLAKSLDSCNPTEQHVSEILNVLRDNVSERDAVFILNTMVNPNTALLALKYFQPKINPAKHVVLYNVTLKVLREVKDFEGAEKLFDEMLQRGVEPNLITFSTIISSASVCSLPDKAIKWFEKMPSFGVEPDASVGSFMIHAYAHSGKADMALELYDRAKAEKWRVDTVAFSVLIKMCGMLENFDGCLSVYNDMKVLGAKPNMVTYNTLLYAMGRAKRALDAKAIYEEMISNGFSPNWPTHAALLQAYCKARFCEDALGVYKEMKKKGMDVNLFLYNLLFDMCADVGCMDEAVEIFEDMKSSGTCQPDNFTYSCLINMYSSHLKRTDSLESSNPWEQQVSTILKGLGDNVSEGDVIFILNRMVDPNTASFVLRYFQNMVNFTRDKEVILYNVVINLFRKSRDFEGAEKLFDEMLQRGVKPDNITFSTLVNCASLSGLPNKAVELFEKMSGFGCEPDGITCSGMVYAYARTNNVDKAVNLYDRAKAENWSLDAVTFSTLIKMYSMAGNYDKCLEVYQEMKVLGVKPNVATYNTLLGAMLRSKKHRQAKAIHKEMKSNGVSPDFITYASLLEVYTRAQCSEDALGVYKEMKGNGMNMTADLYNKLLAMCADVGYTDRAVEIFYEMKSSGTCQPDSWTFSSLITIYSRSGKVSEVEGMLNEMIQSGFQPTIFVMTSLIRCYGKAKRTDDVVKIFKQLLDLGIVPNDHFCCCLLNVLTQTPKEELGKLTDCIEKANTKLGTVVRYLVEEQESDEGFRKETLELLNSIDAEVKKPLCNCLIDLCVKLNVPERACGLLDLGLMLEIYKNIQSKSQTQWSLHLKELSVGAAMTALHVWINDLSEALESGEDLPPLLGINTGQGKHKYSDKGLASVFESRLKELNAPFHEA--KAGWFLVTKAAAKLWLESRDSTESIAGLNFLVLDVPTMAL 1016
BLAST of rna-XM_014663436.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0R0G8S1|A0A0R0G8S1_SOYBN (Smr domain-containing protein OS=Glycine max OX=3847 GN=GLYMA_15G118300 PE=3 SV=1) HSP 1 Score: 1657.5 bits (4291), Expect = 0.000e+0 Identity = 800/1020 (78.43%), Postives = 887/1020 (86.96%), Query Frame = 0
Query: 1 MAQPHPLCSSHCSTYSFSFHSGKPFIIIPSRSKTLLSAPPRFSSAQPFNTLRDAKLDDPDAKSSSLSKNSIWVNPKSSRVKQLWKNSPQTRSSFLSKLAKSLDSCNPTNEHVFQILDVLGDNILERDAVFILNVMVNPTTALLALEHFQQKINPAKHVVLYNVTLKVFREVRDFEGIEKLFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESSNPWEQQVSTILKGIVGKISERDAIFILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQTPKEEFGKLTDCIEKANPKLGTAIRYLVEGKEGNGDFRKETVELLNSFHAEVKKPLCNCLIDLCVKLNVPERACDLLDLGLMLEIYTDIQSRSQNQWSLHLKELSVGAAMTALHVWINDLSRELESGKDLPPLLGINTGQGKHKYSDKGLATVFESHLKELNAPFYEASDNPGWFLVTKPAAISWLESRVSTESIASLNTLALGVPAMAL 1020
MAQP+PLC S ++ F I+PS SKTLL AP RFS QP NTL+DAKLDDPDAKS SLSKNSIWVNP+S R K L KNSP RSS L+KLAKSLDSCNPT +HV +IL+VL DN+ ERDAVFILN MVNP TALLAL++FQ KINPAKHVVLYNVTLKV REV+DFEG EKLFDEMLQRGV PN+ITFSTII+SAS+CSLP KA++WFEKM SFGVEPD S+ FMI AYA SG A++A++LYDRAKAEKWRVDT FS LIK CG+ ENFDGCLSVYNDMKVLG KPNMVTYNTLLYAMGR +RALDAKAIYE+M+++GFSP+W T+AALLQAYCKARF EDALGVY+EMK+KGMDV+ LYNLLFDMCADVGC+DEA EIFEDMKSSGTCQPDNFTY+CLINMYSSHLK +DSLESSNPWEQQVSTILKG+ +SE D IFIL +MVDPNTA FVLRYF + +NFTRDKEVI YNV +NLFRKSRDFEGAEKLFDEML RGVKPDNITFST+ CASVSG P+KAVELFEKM FGCE D +T S M+Y+YARTN VDKA+ LY RAKAE W +DAVTFS LIKM+S+AGNYDKCL +YQ+MKV GVKP+VATYN LLGAMLR++ HRQAK I+ EMK++GVSPDFITYASLLEVYTRA C EDALG+YKEM+GNG+++TADLYNKLL+MCAD+GY D+AVEIFY+MKSS +CQPDSWTF+ L+T+YSRSG+VSE EG+LNEMIQSG QP IFVMTSL+ CYGK KRTDDVVKIF QLL+LGI PNDHFC CLLNVLTQTPKEE GKLTDCIEKAN KLGT +RYLVE +E + FRKET+ELLNS AEVKKPLCNCLIDLCVKLNVPERAC LLDLGLMLEIY +IQS+SQ QWSLHLKELSVGAAMTALHVWINDLS LESG+DLPPLLGINTGQGKHKYSDKGLA+VFES LKELNAPF+EA GWFLVTK AA WLESR STESIA LN L L VP MAL
Sbjct: 1 MAQPYPLCPSPSASSFSFHSRIPFFTIVPSHSKTLLHAP-RFS-LQPVNTLQDAKLDDPDAKSPSLSKNSIWVNPRSPRAKHLQKNSPHARSSSLTKLAKSLDSCNPTEQHVSEILNVLRDNVSERDAVFILNTMVNPNTALLALKYFQPKINPAKHVVLYNVTLKVLREVKDFEGAEKLFDEMLQRGVEPNLITFSTIISSASVCSLPDKAIKWFEKMPSFGVEPDASVGSFMIHAYAHSGKADMALELYDRAKAEKWRVDTVAFSVLIKMCGMLENFDGCLSVYNDMKVLGAKPNMVTYNTLLYAMGRAKRALDAKAIYEEMISNGFSPNWPTHAALLQAYCKARFCEDALGVYKEMKKKGMDVNLFLYNLLFDMCADVGCMDEAVEIFEDMKSSGTCQPDNFTYSCLINMYSSHLKRTDSLESSNPWEQQVSTILKGLGDNVSEGDVIFILNRMVDPNTASFVLRYFQNMVNFTRDKEVILYNVVINLFRKSRDFEGAEKLFDEMLQRGVKPDNITFSTLVNCASVSGLPNKAVELFEKMSGFGCEPDGITCSGMVYAYARTNNVDKAVNLYDRAKAENWSLDAVTFSTLIKMYSMAGNYDKCLEVYQEMKVLGVKPNVATYNTLLGAMLRSKKHRQAKAIHKEMKSNGVSPDFITYASLLEVYTRAQCSEDALGVYKEMKGNGMDMTADLYNKLLAMCADVGYTDRAVEIFYEMKSSGTCQPDSWTFSSLITIYSRSGKVSEVEGMLNEMIQSGFQPTIFVMTSLIRCYGKAKRTDDVVKIFKQLLDLGIVPNDHFCCCLLNVLTQTPKEELGKLTDCIEKANTKLGTVVRYLVEEQESDEGFRKETLELLNSIDAEVKKPLCNCLIDLCVKLNVPERACGLLDLGLMLEIYKNIQSKSQTQWSLHLKELSVGAAMTALHVWINDLSEALESGEDLPPLLGINTGQGKHKYSDKGLASVFESRLKELNAPFHEA--KAGWFLVTKAAAKLWLESRDSTESIAGLNFLVLDVPTMAL 1016
BLAST of rna-XM_014663436.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445IVB3|A0A445IVB3_GLYSO (Pentatricopeptide repeat-containing protein, chloroplastic OS=Glycine soja OX=3848 GN=D0Y65_022866 PE=3 SV=1) HSP 1 Score: 1636.7 bits (4237), Expect = 0.000e+0 Identity = 796/1021 (77.96%), Postives = 886/1021 (86.78%), Query Frame = 0
Query: 1 MAQPHPLCSSHCSTYSFSFHSGKPFIIIPSRSKTLLSAPPRFSSAQPFNTLRDA-KLDDPDAKSSSLSKNSIWVNPKSSRVKQLWKNSPQTRSSFLSKLAKSLDSCNPTNEHVFQILDVLGDNILERDAVFILNVMVNPTTALLALEHFQQKINPAKHVVLYNVTLKVFREVRDFEGIEKLFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESSNPWEQQVSTILKGIVGKISERDAIFILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQTPKEEFGKLTDCIEKANPKLGTAIRYLVEGKEGNGDFRKETVELLNSFHAEVKKPLCNCLIDLCVKLNVPERACDLLDLGLMLEIYTDIQSRSQNQWSLHLKELSVGAAMTALHVWINDLSRELESGKDLPPLLGINTGQGKHKYSDKGLATVFESHLKELNAPFYEASDNPGWFLVTKPAAISWLESRVSTESIASLNTLALGVPAMAL 1020
MAQP+PLCSS ++ S + F IIPS SKTLL AP RFS QPFNTL+DA KLDDPDAKS SLSK S WVNP+S R KQL +NSP RSS L+KLAKSLDSCNPT EHV +IL+VLG+N+ ERDAVFILN M NP TALLAL++FQQKI+P KHVVLYNVTLKV REV+DFEG EKLFDEMLQRGV PN+ITFSTII+SAS+CSLP KA+EWFEKM SFGVEPD S+ FMI AYA SGNA++A+KLY RAKAEKWRVDT FSALIK CG+ ENFDGCLSVYNDMKVLG KPNMVTYN LLYAMGR +RALDAKAIYE+M+++GFSP+W T+AALLQAYCKARF EDALGVY EMK+KGMDV+ LYNLLFDMCADVGC+DEA EIFE+MK SGTCQPDNFTY+CLINMYSSHLK +SLESSNPWEQQVS ILKG+ +SE D IFIL +MVD NTA FVLRYF + INFTRDKEVI YNV +NLFRKSRDF+GAEKLFDEML RGVKPDNITFST+ CASVSG P+KAV LFEKM FGCE D VT SAM+Y+YARTN VDKA+ LY RAKAEKW +DAVTFS LIKM+S+AG YDKCL +YQ+MKV GVKP+V TYN LLGA+LR++ HRQAK IY EMK++GVSPDFITYASLLEVYTRA C E+ALG+YKEM+GNG+++TADLYNKLL+MCAD+GY D+A EIFY+MKSS +CQPDSWTF+ ++TMYSRSG+VSEAEG+LNEMIQSG QP IFVMTSL+ CYGK KRTDDVVKIF QLL+LGI PNDHFC LLNVLTQTPKEE GKLTDCIEKAN KLGT +RYL+E EG+ FRKE +ELLNS AEVKKPLCNCLIDLCVKLNVPERA DLLDLGLMLEIYT+IQ +SQ QWSLHLKELSVGAAMTALHVWINDLS+ LESG+DLPPLLGINTGQGKHKYSDKGLA+VFESHLKELNAPF+E+ GWFLVTK AA SWLESR STESIA LN+L LGVP M L
Sbjct: 1 MAQPYPLCSSRSASSFSSHYRIPFFTIIPSHSKTLLHAP-RFS-FQPFNTLQDAAKLDDPDAKSPSLSKKSFWVNPRSPRAKQLQQNSPHARSSSLTKLAKSLDSCNPTEEHVSEILNVLGNNVAERDAVFILNTMANPNTALLALKYFQQKISPGKHVVLYNVTLKVLREVKDFEGSEKLFDEMLQRGVEPNLITFSTIISSASVCSLPDKAMEWFEKMPSFGVEPDASVASFMIHAYAHSGNADMALKLYGRAKAEKWRVDTAAFSALIKMCGMLENFDGCLSVYNDMKVLGAKPNMVTYNALLYAMGRAKRALDAKAIYEEMISNGFSPNWPTHAALLQAYCKARFPEDALGVYNEMKKKGMDVNLFLYNLLFDMCADVGCMDEAVEIFENMKRSGTCQPDNFTYSCLINMYSSHLKLIESLESSNPWEQQVSAILKGLGDDVSEGDIIFILNRMVDRNTASFVLRYFQNMINFTRDKEVILYNVVMNLFRKSRDFQGAEKLFDEMLQRGVKPDNITFSTLVNCASVSGLPNKAVVLFEKMSHFGCEPDGVTCSAMVYAYARTNNVDKAVNLYDRAKAEKWSLDAVTFSTLIKMYSMAGKYDKCLEVYQEMKVVGVKPNVVTYNTLLGALLRSKKHRQAKAIYKEMKSNGVSPDFITYASLLEVYTRAQCSEEALGVYKEMKGNGMDITADLYNKLLAMCADVGYTDRASEIFYEMKSSGTCQPDSWTFSSMITMYSRSGKVSEAEGMLNEMIQSGFQPTIFVMTSLICCYGKAKRTDDVVKIFKQLLDLGIVPNDHFCCSLLNVLTQTPKEELGKLTDCIEKANTKLGTVVRYLMEELEGDEAFRKEALELLNSIDAEVKKPLCNCLIDLCVKLNVPERARDLLDLGLMLEIYTNIQFKSQTQWSLHLKELSVGAAMTALHVWINDLSKALESGEDLPPLLGINTGQGKHKYSDKGLASVFESHLKELNAPFHES--KAGWFLVTKAAAKSWLESRDSTESIAGLNSLVLGVPTMVL 1017
BLAST of rna-XM_014663436.2 vs. UniProtKB/TrEMBL
Match: tr|A0A371FDH3|A0A371FDH3_MUCPR (Pentatricopeptide repeat-containing protein, chloroplastic (Fragment) OS=Mucuna pruriens OX=157652 GN=P67 PE=3 SV=1) HSP 1 Score: 1623.99 bits (4204), Expect = 0.000e+0 Identity = 787/1020 (77.16%), Postives = 883/1020 (86.57%), Query Frame = 0
Query: 1 MAQPHPLCSSHCSTYSFSFHSGKPFIIIPSRSKTLLSAPPRFSSAQPFNTLRDAKLDDPDAKSSSLSKNSIWVNPKSSRVKQLWKNSPQTRSSFLSKLAKSLDSCNPTNEHVFQILDVLGDNILERDAVFILNVMVNPTTALLALEHFQQKINPAKHVVLYNVTLKVFREVRDFEGIEKLFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESSNPWEQQVSTILKGIVGKISERDAIFILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQTPKEEFGKLTDCIEKANPKLGTAIRYLVEGKEGNGDFRKETVELLNSFHAEVKKPLCNCLIDLCVKLNVPERACDLLDLGLMLEIYTDIQSRSQNQWSLHLKELSVGAAMTALHVWINDLSRELESGKDLPPLLGINTGQGKHKYSDKGLATVFESHLKELNAPFYEASDNPGWFLVTKPAAISWLESRVSTESIASLNTLALGVPAMAL 1020
M QP+PLCSS S FH G PFII S KTL AP RFS L+++KL DPDAKSSS SK SIWVNPK+ R +QL NSP RSS L+KLAKSLDSC+PT EHV +IL+VLGDN+ ERDAVFILN+MVNP ALLAL++FQQKINPAKHVVLYNVTLK+ REVRDF+G+EKLFDEMLQRGVNP++ITFST+I+SASMCSLP KA+EWFEKM SFGVEPD+S+ FMI AYA SGNA++A+KLYDRAKA KWR+DT FSALIK G+ ENFDGCLSVYNDMKVLG KPNMVTYN LLYAMGR +RALDAKAIYE+M+++GFSP+W TYAALLQA+CKAR EDALGVY+EMKEKGM+VD VLYNLLFDMCADVGCL EA EIFEDMKSSG CQPDNFTY+CLINMYSSHLK ++SLES+NPWEQ VSTILK + K+SE D IFIL +MVD NTA FVLR+F SK+ FTRDKEVI YNVTLNLF+KSRDFEGAEKLFDEML RGVKP+NITFSTM CAS+SG P+KAVE FEKM FGCE D +T SAM+Y+YARTN VDKAL LY RAKAE W +D VTFSALIKM+S+AGNYD+CL IYQ+MK+ GVKP+VATYN L GAMLRA+ HRQAKTIY EMK++GVSPDFITYASLL VYTRA C EDALG+YKEM+GNG+++TADLYNK+L+MCAD+GYIDKAVEIFY+MKSS +CQPD WTF+ L+T+YSRSG+VSEAEGILNEMIQSG QPNIFV+TSLV CYGK RTDDVVKIF QLLELG PNDHFC CLLNVL QTP+EE GKLTDCI+KAN KLG+ +RYLVE ++G+GDFRKE ELLNS EVKKPLCNCLIDLCV LNVPERACDLLDLGLMLEIYT+IQSRSQ QWSLH+K LSVGAAMTALHVWI+DLS+ LESG+D+PPLLGINTGQGKHKYSDKGLA++FESHLKELNAPF+EA GWFLVTK AA WLES STESIA LN+L LGVP MAL
Sbjct: 1 MGQPYPLCSSPSS-----FHYGIPFIITLSHPKTLPHAP-RFS-------LQESKLVDPDAKSSSSSKTSIWVNPKNPRAQQLRNNSPHARSSSLTKLAKSLDSCHPTQEHVSEILNVLGDNVSERDAVFILNIMVNPNIALLALKNFQQKINPAKHVVLYNVTLKLLREVRDFQGVEKLFDEMLQRGVNPDLITFSTVISSASMCSLPHKAMEWFEKMPSFGVEPDDSVASFMIHAYARSGNADIALKLYDRAKAAKWRIDTAAFSALIKMYGMLENFDGCLSVYNDMKVLGAKPNMVTYNALLYAMGRAKRALDAKAIYEEMISNGFSPNWPTYAALLQAFCKARCLEDALGVYKEMKEKGMNVDLVLYNLLFDMCADVGCLGEAVEIFEDMKSSGACQPDNFTYSCLINMYSSHLKPAESLESTNPWEQHVSTILKDLGDKVSEGDVIFILNRMVDANTASFVLRFFQSKVKFTRDKEVIVYNVTLNLFKKSRDFEGAEKLFDEMLQRGVKPNNITFSTMVNCASLSGLPNKAVEWFEKMSGFGCEPDGITCSAMVYAYARTNNVDKALNLYDRAKAENWCLDVVTFSALIKMYSMAGNYDQCLTIYQEMKILGVKPNVATYNTLFGAMLRAKKHRQAKTIYKEMKSNGVSPDFITYASLLGVYTRAQCSEDALGVYKEMKGNGIDMTADLYNKVLAMCADVGYIDKAVEIFYEMKSSGTCQPDRWTFSSLITLYSRSGKVSEAEGILNEMIQSGYQPNIFVLTSLVQCYGKATRTDDVVKIFKQLLELGTVPNDHFCCCLLNVLIQTPREEHGKLTDCIQKANTKLGSVVRYLVEEQKGDGDFRKEASELLNSIDVEVKKPLCNCLIDLCVNLNVPERACDLLDLGLMLEIYTNIQSRSQTQWSLHVKGLSVGAAMTALHVWISDLSKALESGEDMPPLLGINTGQGKHKYSDKGLASIFESHLKELNAPFHEA--RAGWFLVTKAAAKPWLESTDSTESIAGLNSLVLGVPTMAL 1005
BLAST of rna-XM_014663436.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2RI04|A0A0B2RI04_GLYSO (Pentatricopeptide repeat-containing protein, chloroplastic OS=Glycine soja OX=3848 GN=glysoja_043287 PE=3 SV=1) HSP 1 Score: 1565.82 bits (4053), Expect = 0.000e+0 Identity = 751/956 (78.56%), Postives = 836/956 (87.45%), Query Frame = 0
Query: 1 MAQPHPLCSSHCSTYSFSFHSGKPFIIIPSRSKTLLSAPPRFSSAQPFNTLRDAKLDDPDAKSSSLSKNSIWVNPKSSRVKQLWKNSPQTRSSFLSKLAKSLDSCNPTNEHVFQILDVLGDNILERDAVFILNVMVNPTTALLALEHFQQKINPAKHVVLYNVTLKVFREVRDFEGIEKLFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMKEKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESSNPWEQQVSTILKGIVGKISERDAIFILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQTPKEEFGKLTDCIEKANPKLGTAIRYLVEGKEGNGDFRKETVELLNSFHAEVKKPLCNCLIDLCVKLNVPERACDLLDLGLMLEIYTDIQSRSQNQWSLHLKELSVGAAMTALHVWINDLSRELESGKDLPPLLGINTGQGKHKYS 956
MAQP+PLC S ++ F I+PS SKTLL AP RFS QP NTL+DAKLDDPDAKS SLSKNSIWVNP+S R K L KNSP RSS L+KLAKSLDSCNPT +HV +IL+VL DN+ ERDAVFILN MVNP TALLAL++FQ KINPAKHVVLYNVTLKV REV+DFEG EKLFDEMLQRGV PN+ITFSTII+SAS+CSLP KA++WFEKM SFGVEPD S+ FMI AYA SG A++A++LYDRAKAEKWRVDT FS LIK CG+ ENFDGCLSVYNDMKVLG KPNMVTYNTLLYAMGR +RALDAKAIYE+M+++GFSP+W T+AALLQAYCKARF EDALGVY+EMK+KGMDV+ LYNLLFDMCADVGC+DEA EIFEDMKSSGTCQPDNFTY+CLINMYSSHLK +DSLESSNPWEQQVSTILKG+ +SE D IFIL +MVDPNTA FVLRYF + +NFTRDKEVI YNV +NLFRKSRDFEGAEKLFDEML RGVKPDNITFST+ CAS+SG P+KAVELFEKM FGCE D +T S M+Y+YARTN VDKA+ LY RAKAE W +DAVTFS LIKM+S+AGNYDKCL +YQ+MKV GVKP+VATYN LLGAMLR++ HRQAK I+ EMK++GVSPDFITYASLLEVYTRA C EDALG+YKEM+GNG+N+TADLYNKLL+MCAD+GY D+AVEIFY+MKSS +CQPDSWTF+ L+T+YSRSG+VSE EG+LNEMIQSG QP IFVMTSL+ CYGK KRTDDVVKIF QLL+LGI PNDHFC CLLNVLTQTPKEE GKLTDCIEKAN KLGT +RYLVE +E + FRKET+ELLNS AEVKKPLCNCLIDLCVKLNVPERAC LLDLGLMLEIY +IQS+SQ QWSLHLKELSVGAAMTALHVWINDLS LESG+DLPPLLGINTGQGKHK S
Sbjct: 1 MAQPYPLCPSPSASSFSFHSRIPFFTIVPSHSKTLLHAP-RFS-LQPVNTLQDAKLDDPDAKSPSLSKNSIWVNPRSPRAKHLQKNSPHARSSSLTKLAKSLDSCNPTEQHVSEILNVLRDNVSERDAVFILNTMVNPNTALLALKYFQPKINPAKHVVLYNVTLKVLREVKDFEGAEKLFDEMLQRGVEPNLITFSTIISSASVCSLPDKAIKWFEKMPSFGVEPDASVGSFMIHAYAHSGKADMALELYDRAKAEKWRVDTVAFSVLIKMCGMLENFDGCLSVYNDMKVLGAKPNMVTYNTLLYAMGRAKRALDAKAIYEEMISNGFSPNWPTHAALLQAYCKARFCEDALGVYKEMKKKGMDVNLFLYNLLFDMCADVGCMDEAVEIFEDMKSSGTCQPDNFTYSCLINMYSSHLKRTDSLESSNPWEQQVSTILKGLGDNVSEGDVIFILNRMVDPNTASFVLRYFQNMVNFTRDKEVILYNVVINLFRKSRDFEGAEKLFDEMLQRGVKPDNITFSTLVNCASLSGLPNKAVELFEKMSGFGCEPDGITCSGMVYAYARTNNVDKAVNLYDRAKAENWSLDAVTFSTLIKMYSMAGNYDKCLEVYQEMKVLGVKPNVATYNTLLGAMLRSKKHRQAKAIHKEMKSNGVSPDFITYASLLEVYTRAQCSEDALGVYKEMKGNGMNMTADLYNKLLAMCADVGYTDRAVEIFYEMKSSGTCQPDSWTFSSLITIYSRSGKVSEVEGMLNEMIQSGFQPTIFVMTSLIRCYGKAKRTDDVVKIFKQLLDLGIVPNDHFCCCLLNVLTQTPKEELGKLTDCIEKANTKLGTVVRYLVEEQESDEGFRKETLELLNSIDAEVKKPLCNCLIDLCVKLNVPERACGLLDLGLMLEIYKNIQSKSQTQWSLHLKELSVGAAMTALHVWINDLSEALESGEDLPPLLGINTGQGKHKSS 954 HSP 2 Score: 1417.91 bits (3669), Expect = 0.000e+0 Identity = 699/949 (73.66%), Postives = 791/949 (83.35%), Query Frame = 0
Query: 71 IWVNPKSSRVKQ-------LWKNSPQTR--SSFLSKLAKSLDSCNPTNEHVFQILDVLGDNILERDAVFILNVMVNPTTALLALEHFQQKINPAKHVVLYNVTLKVFREVRDFEGIEKLFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMK-EKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESSNPWEQQVSTILKGIVGKISERDAIFILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQTPKEEFGKLTDCIEKANPKLGTAIRYLVEGKEGNGDFRKETVELLNSFHAEVKKPLCNCLIDLCVKLNVPERACDLLDLGLMLEIYTDIQSRSQNQWSLHLKELSVGAAMTALHVWINDLSRELESGKDLPPLLGINTGQGKHKYSDKGLATVFESHLKELNAPFYEASDNPGWFLVTKPAAISWLESRVSTESIASLN 1009
+W+N S ++ L N+ Q + SS L+KLAKSLDSCNPT +HV +IL VLGDN+ E DAV ILN MVNP TALLA+ +F QKI P++HVVLYNVTLK+FR VRDFEG EK+FDEMLQRGVNPN+ITFSTII+SASM SLP KA+E+FEKM SFGV+PD + FMI AYA S NA++A++LYDRAKAE+WRVDT F ALIK G +NFDGCL VYNDMKVLG KP TY+TLLY MGR +RA DAKAIYE+M+++GFSP+W TYAALL+AYCKAR EDAL VY+EMK EKGM+VD LYNLLFDMCADVGC+DEA EIFEDMKSS TCQPDNFTY+CLINMYSSHLK ++SLESSNPWEQQVSTILKGI +SE D IFIL KMV+PNTA FVLRYF +KINFT DKE+I YN TLNLFRKSRDFEGAEKLFDEML RGVKP+N TFSTM CA +K VELFEKM FG E D +T SAM+Y+YA +N VDKA+ LY RA AEKW +DA FSALIKM+S+AGNYD+CL IYQ+MKV GVKP+V TYN LLGAML+A HRQAK IY EM+++GVSPDFITYA LLEVYT A EDALG+YKEM+GNG+++TADLYNKLL+M AD+GYID+AVEIFY+M SS +CQPDSWTF L+ +YSRSG+VSEAEG+LNEMIQSG QP IFV+TSLVHCYGK KRTDDVVK+F QLLELGI PNDHFC LLNVLTQ PKEE GKLTDCIEKAN KLG+ ++YLVE +EG+GDFR E E LNS AEVK PLCNCLIDLCVKLNVPERACDLLDLGLMLEIY +IQS+SQ QWSLHLKELSVGAAMTALHVWINDLS+ LESG+DLPPLLGINTG+GKHKYS+KGLA +FESHLKELNAPF+EA GWFL TK A SWLESR SIA LN
Sbjct: 923 VWINDLSEALESGEDLPPLLGINTGQGKHKSSSLTKLAKSLDSCNPTQQHVSEILRVLGDNVFESDAVVILNSMVNPYTALLAVNYFNQKIKPSRHVVLYNVTLKLFRAVRDFEGEEKVFDEMLQRGVNPNLITFSTIISSASMFSLPHKAIEFFEKMPSFGVQPDAGLTSFMIHAYACSWNADMALELYDRAKAERWRVDTAAFLALIKMFGKFDNFDGCLRVYNDMKVLGTKPIKETYDTLLYVMGRAKRAGDAKAIYEEMISNGFSPNWPTYAALLEAYCKARCHEDALRVYKEMKKEKGMNVDVFLYNLLFDMCADVGCMDEAVEIFEDMKSSRTCQPDNFTYSCLINMYSSHLKQTESLESSNPWEQQVSTILKGIGDMVSEGDVIFILNKMVNPNTASFVLRYFLNKINFTTDKELILYNATLNLFRKSRDFEGAEKLFDEMLQRGVKPNNFTFSTMVNCA------NKPVELFEKMSGFGYEPDGITCSAMVYAYALSNNVDKAVSLYDRAIAEKWCLDAAAFSALIKMYSMAGNYDRCLKIYQEMKVLGVKPNVVTYNTLLGAMLKAEKHRQAKAIYKEMRSNGVSPDFITYACLLEVYTIAHYSEDALGVYKEMKGNGMDMTADLYNKLLAMYADMGYIDRAVEIFYEMNSSGTCQPDSWTFASLIAIYSRSGKVSEAEGMLNEMIQSGFQPTIFVLTSLVHCYGKAKRTDDVVKVFKQLLELGIVPNDHFCCSLLNVLTQAPKEELGKLTDCIEKANTKLGSVVKYLVE-EEGDGDFRNEVSEFLNSIDAEVKMPLCNCLIDLCVKLNVPERACDLLDLGLMLEIYKNIQSKSQTQWSLHLKELSVGAAMTALHVWINDLSKALESGEDLPPLLGINTGKGKHKYSEKGLAGIFESHLKELNAPFHEAK--AGWFLATKAPAKSWLESR---GSIADLN 1859
BLAST of rna-XM_014663436.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0R0FZH3|A0A0R0FZH3_SOYBN (Smr domain-containing protein OS=Glycine max OX=3847 GN=106796311 PE=3 SV=1) HSP 1 Score: 1467.98 bits (3799), Expect = 0.000e+0 Identity = 732/1008 (72.62%), Postives = 824/1008 (81.75%), Query Frame = 0
Query: 8 CSSHCSTYS----FSFHSGKP-FIIIPSRSKTLLSAPPRFSSAQPFNTLRDAKLDDPDAKSSSLSKNSIWVNPKSSRVKQLWKNSPQTRSSFLSKLAKSLDSCNPTNEHVFQILDVLGDNILERDAVFILNVMVNPTTALLALEHFQQKINPAKHVVLYNVTLKVFREVRDFEGIEKLFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMK-EKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESSNPWEQQVSTILKGIVGKISERDAIFILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQTPKEEFGKLTDCIEKANPKLGTAIRYLVEGKEGNGDFRKETVELLNSFHAEVKKPLCNCLIDLCVKLNVPERACDLLDLGLMLEIYTDIQSRSQNQWSLHLKELSVGAAMTALHVWINDLSRELESGKDLPPLLGINTGQGKHKYSDKGLATVFESHLKELNAPFYEASDNPGWFLVTKPAAISWLESRVSTESIASLN 1009
C +TY+ FS H P F + ++ KTLL Q NT +D PDAKSS L + SIWVNPKS R K LWKN RSS L+KLAKSLDSCNPT +HV +IL VLGDN+ E DAV ILN MVNP TALLA+ +F QKI P++HVVLYNVTLK+FR VRDFEG EK+FDEMLQRGVNPN+ITFSTII+SASM SLP KA+E+FEKM SFGV+PD + FMI AYA S NA++A++LYDRAKAE+WRVDT F ALIK G +NFDGCL VYNDMKVLG KP TY+TLLY MGR +RA DAKAIYE+M+++GFSP+W TYAALL+AYCKAR EDAL VY+EMK EKGM+VD LYNLLFDMCADVGC+DEA EIFEDMKSS TCQPDNFTY+CLINMYSSHLK ++SLESSNPWEQQVSTILKGI +SE D IFIL KMV+PNTA FVLRYF SKINFT DKE+I YN TLNLFRKSRDFEGAEKLFDEML RGVKP+N TFSTM CA +K VELFEKM FG E D +T SAM+Y+YA +N VDKA+ LY RA AEKW +DA FSALIKM+S+AGNYD+CL IYQ+MKV GVKP+V TYN LLGAML+A HRQAK IY EM+++GVSPDFITYA LLEVYT A EDALG+YKEM+GNG+++TADLYNKLL+M AD+GYID+AVEIFY+M SS +CQPDSWTF L+ +YSRSG+VSEAEG+LNEMIQSG QP IFV+TSLVHCYGK KRTDDVVK+F QLLELGI PNDHFC LLNVLTQ PKEE GKLTDCIEKAN KLG+ ++YLVE +EG+GDFR E E LNS AEVK PLCNCLIDLCVKLNVPERACDLLDLGLMLEIY +IQS+SQ QWSLHLKELSVGAAMTALHVWINDLS+ LESG+DLPPLLGINTG+GKHKYS+KGLA +FESHLKELNAPF+EA GWFL TK A SWLESR SIA LN
Sbjct: 33 CRKPITTYNSFSYFSRHFKLPTFPLSHNKPKTLLQV-------QAANTPQD-----PDAKSSPLPQTSIWVNPKSPRAKHLWKNPYHARSSSLTKLAKSLDSCNPTQQHVSEILRVLGDNVFESDAVVILNSMVNPYTALLAVNYFNQKIKPSRHVVLYNVTLKLFRAVRDFEGEEKVFDEMLQRGVNPNLITFSTIISSASMFSLPHKAIEFFEKMPSFGVQPDAGLTSFMIHAYACSWNADMALELYDRAKAERWRVDTAAFLALIKMFGKFDNFDGCLRVYNDMKVLGTKPIKETYDTLLYVMGRAKRAGDAKAIYEEMISNGFSPNWPTYAALLEAYCKARCHEDALRVYKEMKKEKGMNVDVFLYNLLFDMCADVGCMDEAVEIFEDMKSSRTCQPDNFTYSCLINMYSSHLKQTESLESSNPWEQQVSTILKGIGDMVSEGDVIFILNKMVNPNTASFVLRYFLSKINFTTDKELILYNATLNLFRKSRDFEGAEKLFDEMLQRGVKPNNFTFSTMVNCA------NKPVELFEKMSGFGYEPDGITCSAMVYAYALSNNVDKAVSLYDRAIAEKWCLDAAAFSALIKMYSMAGNYDRCLKIYQEMKVLGVKPNVVTYNTLLGAMLKAEKHRQAKAIYKEMRSNGVSPDFITYACLLEVYTIAHYSEDALGVYKEMKGNGMDMTADLYNKLLAMYADMGYIDRAVEIFYEMNSSGTCQPDSWTFASLIAIYSRSGKVSEAEGMLNEMIQSGFQPTIFVLTSLVHCYGKAKRTDDVVKVFKQLLELGIVPNDHFCCSLLNVLTQAPKEELGKLTDCIEKANTKLGSVVKYLVE-EEGDGDFRNEVSEFLNSIDAEVKMPLCNCLIDLCVKLNVPERACDLLDLGLMLEIYKNIQSKSQTQWSLHLKELSVGAAMTALHVWINDLSKALESGEDLPPLLGINTGKGKHKYSEKGLAGIFESHLKELNAPFHEAK--AGWFLATKAPAKSWLESR---GSIADLN 1016
BLAST of rna-XM_014663436.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445GSH3|A0A445GSH3_GLYSO (Pentatricopeptide repeat-containing protein, chloroplastic OS=Glycine soja OX=3848 GN=D0Y65_040649 PE=3 SV=1) HSP 1 Score: 1467.21 bits (3797), Expect = 0.000e+0 Identity = 731/1008 (72.52%), Postives = 824/1008 (81.75%), Query Frame = 0
Query: 8 CSSHCSTYS----FSFHSGKP-FIIIPSRSKTLLSAPPRFSSAQPFNTLRDAKLDDPDAKSSSLSKNSIWVNPKSSRVKQLWKNSPQTRSSFLSKLAKSLDSCNPTNEHVFQILDVLGDNILERDAVFILNVMVNPTTALLALEHFQQKINPAKHVVLYNVTLKVFREVRDFEGIEKLFDEMLQRGVNPNIITFSTIITSASMCSLPRKAVEWFEKMRSFGVEPDNSMFLFMIRAYASSGNAEVAMKLYDRAKAEKWRVDTGVFSALIKTCGISENFDGCLSVYNDMKVLGVKPNMVTYNTLLYAMGRGRRALDAKAIYEDMLNSGFSPSWATYAALLQAYCKARFREDALGVYREMK-EKGMDVDAVLYNLLFDMCADVGCLDEASEIFEDMKSSGTCQPDNFTYACLINMYSSHLKHSDSLESSNPWEQQVSTILKGIVGKISERDAIFILTKMVDPNTALFVLRYFHSKINFTRDKEVITYNVTLNLFRKSRDFEGAEKLFDEMLYRGVKPDNITFSTMAICASVSGFPDKAVELFEKMPSFGCERDDVTSSAMIYSYARTNKVDKALELYGRAKAEKWRVDAVTFSALIKMFSVAGNYDKCLIIYQDMKVRGVKPSVATYNNLLGAMLRARNHRQAKTIYNEMKNSGVSPDFITYASLLEVYTRALCGEDALGLYKEMQGNGVNVTADLYNKLLSMCADLGYIDKAVEIFYDMKSSESCQPDSWTFTFLMTMYSRSGRVSEAEGILNEMIQSGLQPNIFVMTSLVHCYGKFKRTDDVVKIFNQLLELGIDPNDHFCSCLLNVLTQTPKEEFGKLTDCIEKANPKLGTAIRYLVEGKEGNGDFRKETVELLNSFHAEVKKPLCNCLIDLCVKLNVPERACDLLDLGLMLEIYTDIQSRSQNQWSLHLKELSVGAAMTALHVWINDLSRELESGKDLPPLLGINTGQGKHKYSDKGLATVFESHLKELNAPFYEASDNPGWFLVTKPAAISWLESRVSTESIASLN 1009
C +TY+ FS H P F + ++ KTLL Q NT +D PDAKSS L + SIWVNPKS R K LWKN RSS L+KLAKSLDSCNPT +HV +IL VLGDN+ E DAV ILN MVNP TALLA+ +F QKI P++HVVLYNVTLK+FR VRDFEG EK+FDEMLQRGVNPN+ITFSTII+SASM SLP KA+E+FEKM SFGV+PD + FMI AYA S NA++A++LYDRAKAE+WRVDT F ALIK G +NFDGCL VYNDMKVLG KP TY+TLLY MGR +RA DAKAIYE+M+++GFSP+W TYAALL+AYCKAR EDAL VY+EMK EKGM+VD LYNLLFDMCADVGC+DEA EIFEDMKSS TCQPDNFTY+CLINMYSSHLK ++SLESSNPWEQQVSTILKGI +SE D IFIL KMV+PNTA FVLRYF +KINFT DKE+I YN TLNLFRKSRDFEGAEKLFDEML RGVKP+N TFSTM CA +K VELFEKM FG E D +T SAM+Y+YA +N VDKA+ LY RA AEKW +DA FSALIKM+S+AGNYD+CL IYQ+MKV GVKP+V TYN LLGAML+A HRQAK IY EM+++GVSPDFITYA LLEVYT A EDALG+YKEM+GNG+++TADLYNKLL+M AD+GYID+AVEIFY+M SS +CQPDSWTF L+ +YSRSG+VSEAEG+LNEMIQSG QP IFV+TSLVHCYGK KRTDDVVK+F QLLELGI PNDHFC LLNVLTQ PKEE GKLTDCIEKAN KLG+ ++YLVE +EG+GDFR E E LNS AEVK PLCNCLIDLCVKLNVPERACDLLDLGLMLEIY +IQS+SQ QWSLHLKELSVGAAMTALHVWINDLS+ LESG+DLPPLLGINTG+GKHKYS+KGLA +FESHLKELNAPF+EA GWFL TK A SWLESR SIA LN
Sbjct: 33 CRKPITTYNSFSYFSRHFKLPTFPLSHNKPKTLLQV-------QAANTPQD-----PDAKSSPLPQTSIWVNPKSPRAKHLWKNPYHARSSSLTKLAKSLDSCNPTQQHVSEILRVLGDNVFESDAVVILNSMVNPYTALLAVNYFNQKIKPSRHVVLYNVTLKLFRAVRDFEGEEKVFDEMLQRGVNPNLITFSTIISSASMFSLPHKAIEFFEKMPSFGVQPDAGLTSFMIHAYACSWNADMALELYDRAKAERWRVDTAAFLALIKMFGKFDNFDGCLRVYNDMKVLGTKPIKETYDTLLYVMGRAKRAGDAKAIYEEMISNGFSPNWPTYAALLEAYCKARCHEDALRVYKEMKKEKGMNVDVFLYNLLFDMCADVGCMDEAVEIFEDMKSSRTCQPDNFTYSCLINMYSSHLKQTESLESSNPWEQQVSTILKGIGDMVSEGDVIFILNKMVNPNTASFVLRYFLNKINFTTDKELILYNATLNLFRKSRDFEGAEKLFDEMLQRGVKPNNFTFSTMVNCA------NKPVELFEKMSGFGYEPDGITCSAMVYAYALSNNVDKAVSLYDRAIAEKWCLDAAAFSALIKMYSMAGNYDRCLKIYQEMKVLGVKPNVVTYNTLLGAMLKAEKHRQAKAIYKEMRSNGVSPDFITYACLLEVYTIAHYSEDALGVYKEMKGNGMDMTADLYNKLLAMYADMGYIDRAVEIFYEMNSSGTCQPDSWTFASLIAIYSRSGKVSEAEGMLNEMIQSGFQPTIFVLTSLVHCYGKAKRTDDVVKVFKQLLELGIVPNDHFCCSLLNVLTQAPKEELGKLTDCIEKANTKLGSVVKYLVE-EEGDGDFRNEVSEFLNSIDAEVKMPLCNCLIDLCVKLNVPERACDLLDLGLMLEIYKNIQSKSQTQWSLHLKELSVGAAMTALHVWINDLSKALESGEDLPPLLGINTGKGKHKYSEKGLAGIFESHLKELNAPFHEAK--AGWFLATKAPAKSWLESR---GSIADLN 1016 The following BLAST results are available for this feature:
BLAST of rna-XM_014663436.2 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot) Total hits: 10
BLAST of rna-XM_014663436.2 vs. Araport11
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11) Total hits: 10
BLAST of rna-XM_014663436.2 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0
Date Performed: 2023-06-20
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-XM_014663436.2_VrVC1973A-SNU_v1 ID=rna-XM_014663436.2_VrVC1973A-SNU_v1; Name=rna-XM_014663436.2; organism=Vigna radiata; type=mRNA; length=3063bpback to top protein sequence of rna-XM_014663436.2_VrVC1973A-SNU_v1 >rna-XM_014663436.2_VrVC1973A-SNU_v1 ID=rna-XM_014663436.2_VrVC1973A-SNU_v1; Name=rna-XM_014663436.2_VrVC1973A-SNU_v1; organism=Vigna radiata; type=polypeptide; length=1020bpback to top mRNA from alignment at chr10:14703579..14706901+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>rna-XM_014663436.2_VrVC1973A-SNU_v1 ID=rna-XM_014663436.2_VrVC1973A-SNU_v1; Name=rna-XM_014663436.2; organism=Vigna radiata; type=mRNA; length=3323bp; location=Sequence derived from: chr10:14703579..14706901+ (Vigna radiataback to top Coding sequence (CDS) from alignment at chr10:14703579..14706901+ >rna-XM_014663436.2_VrVC1973A-SNU_v1 ID=rna-XM_014663436.2_VrVC1973A-SNU_v1; Name=rna-XM_014663436.2; organism=Vigna radiata; type=CDS; length=3063bp; location=Sequence derived from: chr10:14703579..14706901+ (Vigna radiataback to top |