rna-XM_014664195.2

Transcript Overview
Namerna-XM_014664195.2
Unique Namerna-XM_014664195.2_VrVC1973A-SNU_v1
TypemRNA
OrganismVigna radiata (Mung bean, green gram)
Sequence length588
Productuncharacterized protein At4g22758-like
References
External references for this mRNA
DatabaseAccession
GeneID106776722
GenbankXM_014664195.2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr02chromosomechr02:7378633..7380041 -Vigna radiata cv. VC1973A genome v6.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
asvrvL100Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anvrvL0092Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL0271Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvrvL549Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anvrvL0688Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL0921Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL1000Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL1072Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
caivrvL048Cicer arietinum ICC 4958 genome v2Cicer arietinum
caivrvL626Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavrvL029Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavrvL190Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavrvL509Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvrvL0382Cajanus cajan Asha genome v1.0Cajanus cajan
crvrvL027Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crvrvL220Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ccvrvL0853Cajanus cajan Asha genome v1.0Cajanus cajan
crvrvL585Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
psvrvL171Pisum sativum Cameor genome v1aPisum sativum
pvvrvL017Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
psvrvL370Pisum sativum Cameor genome v1aPisum sativum
pvvrvL137Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
psvrvL651Pisum sativum Cameor genome v1aPisum sativum
psvrvL655Pisum sativum Cameor genome v1aPisum sativum
pvvrvL448Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
tifvrvL151Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvrvL329Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvrvL653Vicia faba cv. Tiffany genome v1.0Vicia faba
vrvvrvR103Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvrvL158Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvrvL343Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvssR235Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvssR253Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvssR297Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvrvL664Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvuR201Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vrvvuaR183Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvzwsR199Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvvuR218Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vrvvuaR199Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvzwsR234Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canvrvL026Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvrvL481Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvrvL057Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvrvL504Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvrvL023Cicer arietinum
carvrvL256Cicer arietinum
carvrvL486Cicer arietinum
ccavrvL079Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavrvL300Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavrvL392Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vrvvumR201Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvumR216Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvumR230Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvumR238Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvvaR217Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvvaR224Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvvaR257Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvstR202Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vrvvstR217Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vrvvstR225Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vrvvstR241Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvrvL471Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvrvL503Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvrvL012Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvrvL132Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvrvL403Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vrvvunR195Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vrvvunR211Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
PvulFLAVERTChr05.838Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
rna-TanjilR_30171Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
jg7913.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vum_06G01129.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vigun11g131400.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
LR48_mrnaVigan05g172200Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-KK1_022273Cajanus cajan Asha genome v1.0Cajanus cajan
Ca_00797.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
rna-TanjilR_17100Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Ca_16446Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vigst.07G053100.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Cc_v2.0_23722.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vfaba.Hedin2.R1.6g021240.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vigun05g240400.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vigan.07G070000.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Va05G048700.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vigan.06G171700.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
rna-KK1_026363Cajanus cajan Asha genome v1.0Cajanus cajan
XM_058923749.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
LR48_mrnaVigan08g142500Vigna angularis Jingnong 6 genome v1.1Vigna angularis
evm.model.Chr11.1260Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
XM_058877426.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
jg44267.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-TanjilR_04339Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vfaba.Tiffany.R1.1g045360.1Vicia faba cv. Tiffany genome v1.0Vicia faba
PvulFLAVERTChr11.1000566Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Psat05G0715700-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
rna-TanjilR_16268Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vfaba.Hedin2.R1.1g064920.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Cr_17349.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Vigst.06G152300.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
evm.model.Chr05.2275Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Phvul.005G127500.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vigun11g131400.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vigun05g240400.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Ca_07025Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Va08G060100.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vum_07G00565.1Vigna umbellata FF25 genome v1.0Vigna umbellata
rna-XM_004487473.2Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Phvul.011G090100.2Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Psat07G0449600-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vfaba.Tiffany.R1.6g016120.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Psat5g254560.1Pisum sativum Cameor genome v1aPisum sativum
Cr_01315.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-XM_014641996.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LOC106776722gene-LOC106776722_VrVC1973A-SNU_v1Vigna radiatagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_014664195.2-2exon-XM_014664195.2-2_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_014664195.2-1exon-XM_014664195.2-1_VrVC1973A-SNU_v1Vigna radiataexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-XP_014519681.1cds-XP_014519681.1_VrVC1973A-SNU_v1_2Vigna radiataCDS
cds-XP_014519681.1cds-XP_014519681.1_VrVC1973A-SNU_v1Vigna radiataCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-XM_014664195.2_VrVC1973A-SNU_v1rna-XM_014664195.2_VrVC1973A-SNU_v1Vigna radiatapolypeptide
rna-XM_014664195.2_VrVC1973A-SNU_v1rna-XM_014664195.2_VrVC1973A-SNU_v1-proteinVigna radiatapolypeptide


Homology
BLAST of rna-XM_014664195.2 vs. UniProtKB/Swiss-Prot
Match: sp|Q56XJ7|Y4276_ARATH (Uncharacterized protein At4g22758 OS=Arabidopsis thaliana OX=3702 GN=At4g22758 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.181e-13
Identity = 40/121 (33.06%), Postives = 72/121 (59.50%), Query Frame = 0
Query:   49 PELLLDRNRSSPAATAEVVR----RQPPKLLLKVTIMGSLGPVQVVMTTESAVGDLVAAAVNQYVKEGRRPILPSNDPSQFDLHYSQFTLESLDRNEKLSDIGSRNFFLCPRKHGGGDGGS 165
            P LL   N  SP++++ + +    ++ PK+++ V + GS GPV+ ++     V + +   V++Y KEGR P L  +  S F+LH S F+++ L++ E + ++GSR+F++  RK     GGS
Sbjct:   98 PSLL---NLYSPSSSSPINQEGNTKEAPKVIISVAVEGSPGPVRAMVKLSCNVEETIKIVVDKYCKEGRTPKL--DRDSAFELHQSHFSIQCLEKREIIGELGSRSFYM--RKKAPETGGS 211          
BLAST of rna-XM_014664195.2 vs. Araport11
Match: AT2G27830.1 (| hypothetical protein | Chr2:11860734-11861306 FORWARD LENGTH=190 | 201606)

HSP 1 Score: 175.637 bits (444), Expect = 8.979e-56
Identity = 96/194 (49.48%), Postives = 121/194 (62.37%), Query Frame = 0
Query:    1 MQNSKNHRNGQAEPHRRGKLTNKSSSFHSHSSSTAGMPGASIRRPMTVPELLLDRNRSSPAATAEVVRRQPP---KLLLKVTIMGSLGPVQVVMTTESAVGDLVAAAVNQYVKEGRRPILPSNDPSQFDLHYSQFTLESLDRNEKLSDIGSRNFFLCPRKHGGGDGGSTTSFASCSTEADKTTKGGAFGWLRFM 191
            M+N       + E   R KL+ K+ SFH   ++    PG  +RRP T+PEL       +   T  +    PP   KLLL VT+ GSLG VQ++++ ES V DL+ AAV QYVKE RRP LP ++PS+FDLHYSQF+LES+ R+EKL  +GSRNFFLC RK  GG  G   S  SCS EA+K  K G F WL+FM
Sbjct:    1 MKNGNRKTTPETEKSHRRKLSEKAMSFHGRGTTPLSNPG-ELRRPKTLPELFSTGQSITVPETVSL----PPRLTKLLLNVTVQGSLGAVQIIISPESTVSDLIDAAVRQYVKEARRPFLPESEPSRFDLHYSQFSLESIVRDEKLISLGSRNFFLCGRKETGGFIGCGLSSESCSKEAEKVAKTG-FHWLKFM 188          
BLAST of rna-XM_014664195.2 vs. Araport11
Match: AT4G22758.1 (| PPR containing protein | Chr4:11958477-11959904 FORWARD LENGTH=255 | 201606)

HSP 1 Score: 70.4774 bits (171), Expect = 1.208e-14
Identity = 40/121 (33.06%), Postives = 72/121 (59.50%), Query Frame = 0
Query:   49 PELLLDRNRSSPAATAEVVR----RQPPKLLLKVTIMGSLGPVQVVMTTESAVGDLVAAAVNQYVKEGRRPILPSNDPSQFDLHYSQFTLESLDRNEKLSDIGSRNFFLCPRKHGGGDGGS 165
            P LL   N  SP++++ + +    ++ PK+++ V + GS GPV+ ++     V + +   V++Y KEGR P L  +  S F+LH S F+++ L++ E + ++GSR+F++  RK     GGS
Sbjct:   98 PSLL---NLYSPSSSSPINQEGNTKEAPKVIISVAVEGSPGPVRAMVKLSCNVEETIKIVVDKYCKEGRTPKL--DRDSAFELHQSHFSIQCLEKREIIGELGSRSFYM--RKKAPETGGS 211          
BLAST of rna-XM_014664195.2 vs. Araport11
Match: AT1G70780.1 (| hypothetical protein | Chr1:26695462-26695975 REVERSE LENGTH=140 | 201606)

HSP 1 Score: 58.151 bits (139), Expect = 6.299e-11
Identity = 28/82 (34.15%), Postives = 48/82 (58.54%), Query Frame = 0
Query:   73 KLLLKVTIMGSLGPVQVVMTTESAVGDLVAAAVNQYVKEGRRPILPSNDPSQFDLHYSQFTLESLDRNEKLSDIGSRNFFLC 154
            ++L+ VT++GS GP++ V   +  V  ++  A+  Y +EGR P+L S D + F L+      E+L   + +  +G+RNF LC
Sbjct:   17 RILISVTVLGSAGPIRFVAYEDDLVASVIDTALKGYAREGRLPLLGS-DFNDFLLYCPMVGPEALSTWDAIGSLGARNFMLC 97          
BLAST of rna-XM_014664195.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3VMT5|A0A1S3VMT5_VIGRR (uncharacterized protein At4g22758-like OS=Vigna radiata var. radiata OX=3916 GN=LOC106776722 PE=4 SV=1)

HSP 1 Score: 404.06 bits (1037), Expect = 1.829e-142
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0
Query:    1 MQNSKNHRNGQAEPHRRGKLTNKSSSFHSHSSSTAGMPGASIRRPMTVPELLLDRNRSSPAATAEVVRRQPPKLLLKVTIMGSLGPVQVVMTTESAVGDLVAAAVNQYVKEGRRPILPSNDPSQFDLHYSQFTLESLDRNEKLSDIGSRNFFLCPRKHGGGDGGSTTSFASCSTEADKTTKGGAFGWLRFMDLSR 195
            MQNSKNHRNGQAEPHRRGKLTNKSSSFHSHSSSTAGMPGASIRRPMTVPELLLDRNRSSPAATAEVVRRQPPKLLLKVTIMGSLGPVQVVMTTESAVGDLVAAAVNQYVKEGRRPILPSNDPSQFDLHYSQFTLESLDRNEKLSDIGSRNFFLCPRKHGGGDGGSTTSFASCSTEADKTTKGGAFGWLRFMDLSR
Sbjct:    1 MQNSKNHRNGQAEPHRRGKLTNKSSSFHSHSSSTAGMPGASIRRPMTVPELLLDRNRSSPAATAEVVRRQPPKLLLKVTIMGSLGPVQVVMTTESAVGDLVAAAVNQYVKEGRRPILPSNDPSQFDLHYSQFTLESLDRNEKLSDIGSRNFFLCPRKHGGGDGGSTTSFASCSTEADKTTKGGAFGWLRFMDLSR 195          
BLAST of rna-XM_014664195.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3SCA5|A0A0S3SCA5_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.06G171700 PE=4 SV=1)

HSP 1 Score: 391.734 bits (1005), Expect = 1.358e-137
Identity = 189/195 (96.92%), Postives = 190/195 (97.44%), Query Frame = 0
Query:    1 MQNSKNHRNGQAEPHRRGKLTNKSSSFHSHSSSTAGMPGASIRRPMTVPELLLDRNRSSPAATAEVVRRQPPKLLLKVTIMGSLGPVQVVMTTESAVGDLVAAAVNQYVKEGRRPILPSNDPSQFDLHYSQFTLESLDRNEKLSDIGSRNFFLCPRKHGGGDGGSTTSFASCSTEADKTTKGGAFGWLRFMDLSR 195
            MQNSKNHRNGQAE HRRGKLTNKSSSFHS S+ST GMPGASIRRPMTVPELLLDRNRSSPAA AEVVRRQPPKLLLKVTIMGSLGPVQVVMTTESAVGDLVAAAVNQYVKEGRRPILPSNDPSQFDLHYSQFTLESLDRNEKLSDIGSRNFFLCPRKHGGGDGGSTTSF SCSTEADKTTKGGAFGWLRFMDLSR
Sbjct:    1 MQNSKNHRNGQAELHRRGKLTNKSSSFHSQSTSTTGMPGASIRRPMTVPELLLDRNRSSPAAAAEVVRRQPPKLLLKVTIMGSLGPVQVVMTTESAVGDLVAAAVNQYVKEGRRPILPSNDPSQFDLHYSQFTLESLDRNEKLSDIGSRNFFLCPRKHGGGDGGSTTSFTSCSTEADKTTKGGAFGWLRFMDLSR 195          
BLAST of rna-XM_014664195.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9V6I6|A0A0L9V6I6_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan08g142500 PE=4 SV=1)

HSP 1 Score: 391.734 bits (1005), Expect = 1.358e-137
Identity = 189/195 (96.92%), Postives = 190/195 (97.44%), Query Frame = 0
Query:    1 MQNSKNHRNGQAEPHRRGKLTNKSSSFHSHSSSTAGMPGASIRRPMTVPELLLDRNRSSPAATAEVVRRQPPKLLLKVTIMGSLGPVQVVMTTESAVGDLVAAAVNQYVKEGRRPILPSNDPSQFDLHYSQFTLESLDRNEKLSDIGSRNFFLCPRKHGGGDGGSTTSFASCSTEADKTTKGGAFGWLRFMDLSR 195
            MQNSKNHRNGQAE HRRGKLTNKSSSFHS S+ST GMPGASIRRPMTVPELLLDRNRSSPAA AEVVRRQPPKLLLKVTIMGSLGPVQVVMTTESAVGDLVAAAVNQYVKEGRRPILPSNDPSQFDLHYSQFTLESLDRNEKLSDIGSRNFFLCPRKHGGGDGGSTTSF SCSTEADKTTKGGAFGWLRFMDLSR
Sbjct:    1 MQNSKNHRNGQAELHRRGKLTNKSSSFHSQSTSTTGMPGASIRRPMTVPELLLDRNRSSPAAAAEVVRRQPPKLLLKVTIMGSLGPVQVVMTTESAVGDLVAAAVNQYVKEGRRPILPSNDPSQFDLHYSQFTLESLDRNEKLSDIGSRNFFLCPRKHGGGDGGSTTSFTSCSTEADKTTKGGAFGWLRFMDLSR 195          
BLAST of rna-XM_014664195.2 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6LHI1|A0A4D6LHI1_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG3g2632 PE=4 SV=1)

HSP 1 Score: 325.094 bits (832), Expect = 3.874e-111
Identity = 180/197 (91.37%), Postives = 183/197 (92.89%), Query Frame = 0
Query:    1 MQNSKNHRNGQAEPHRRGKLTNKSSSFHSHSSSTAGMPGASIRRPMTVPELLLDRNRSSPAATAEVVRRQPPKLLLKVTIMGSLGPVQVVMTTESAVGDLVAAAVNQYVKEGRRPILPSNDPSQFDLHYSQFTLESLDRNEKLSDIGSRNFFLCPRKH--GGGDGGSTTSFASCSTEADKTTKGGAFGWLRFMDLSR 195
            MQNSKNHRNGQAE HRR KLTNKSSSFHS SSS A M G SIRRPMTVPELLLDRNRS+PAA AEVVRRQPPKLLLKVTIMGSLGPVQVVMT ESAVGDLVAAAVNQY+KEGRRPILPSNDPSQFDLHYSQFTLESLDRNEKL DIGSRNFFLCP+KH  GGGDGGSTT FASCS EADKTTKGGAFGWLRFMDLSR
Sbjct:    1 MQNSKNHRNGQAESHRRWKLTNKSSSFHSQSSSAAAMSGTSIRRPMTVPELLLDRNRSAPAAAAEVVRRQPPKLLLKVTIMGSLGPVQVVMTPESAVGDLVAAAVNQYIKEGRRPILPSNDPSQFDLHYSQFTLESLDRNEKLKDIGSRNFFLCPKKHGGGGGDGGSTTPFASCSREADKTTKGGAFGWLRFMDLSR 197          
BLAST of rna-XM_014664195.2 vs. UniProtKB/TrEMBL
Match: tr|V7AGG6|V7AGG6_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_011G090100g PE=4 SV=1)

HSP 1 Score: 311.997 bits (798), Expect = 5.843e-106
Identity = 168/196 (85.71%), Postives = 174/196 (88.78%), Query Frame = 0
Query:    1 MQNSKNHRNGQAEPHRRGKLTNKSSSFHSHSSSTAGMPGASIRRPMTVPELLLDRNRSSPAATAEVVRRQPPKLLLKVTIMGSLGPVQVVMTTESAVGDLVAAAVNQYVKEGRRPILPSNDPSQFDLHYSQFTLESLDRNEKLSDIGSRNFFLCPRKH--GGGDGGSTTSFASCSTEADKTTKGGAFGWLRFMDLS 194
            MQNSKNHRNGQAEPHRRGKLTNKSSSFHS+SS  A M    +RRPMT+PELLLD+NR  P A  EVV RQPPKLLLKVTIMGSLGPVQVVMTTESAVGDLVAAAVNQY+KEGRRPILPSNDPS FDLHYSQFTLESLDR EKL DIGSRNF+LCPRKH  GGGD GSTT FASCS EADKTTKGGAFGWLRFMD S
Sbjct:    1 MQNSKNHRNGQAEPHRRGKLTNKSSSFHSNSSPPATMSSTPLRRPMTLPELLLDKNR--PTAVVEVVPRQPPKLLLKVTIMGSLGPVQVVMTTESAVGDLVAAAVNQYIKEGRRPILPSNDPSHFDLHYSQFTLESLDRKEKLRDIGSRNFYLCPRKHGGGGGDDGSTTPFASCSREADKTTKGGAFGWLRFMDFS 194          
BLAST of rna-XM_014664195.2 vs. UniProtKB/TrEMBL
Match: tr|A0A151TNN0|A0A151TNN0_CAJCA (Uncharacterized protein At4g22760 family OS=Cajanus cajan OX=3821 GN=KK1_022273 PE=4 SV=1)

HSP 1 Score: 296.59 bits (758), Expect = 6.873e-100
Identity = 151/197 (76.65%), Postives = 162/197 (82.23%), Query Frame = 0
Query:    1 MQNSKNHRNGQAEPHRRGKLTNKSSSFHSHSSSTAGMPG-ASIRRPMTVPELLLDRNRSSPAATAEV-VRRQPPKLLLKVTIMGSLGPVQVVMTTESAVGDLVAAAVNQYVKEGRRPILPSNDPSQFDLHYSQFTLESLDRNEKLSDIGSRNFFLCPRKHGGGDGGSTTSFASCSTEADKTTKGGAFGWLRFMDLSR 195
            M NSKNHRNGQ EPHRRGKLT KSSSF+ HSS+   +   A IRRP TVP+LL DRNR   AA A   + +QPPKLLLKVT MGSLGPVQVVMT ES VGDLVA AV QYVKEGRRPILPSNDPSQFDLHYSQF+LESLDR EKL DIGSRNFFLCPRK  G DGG+TT FASCS EA++ +KGGAFGWLRFMD SR
Sbjct:    1 MANSKNHRNGQGEPHRRGKLTKKSSSFYGHSSTPPPIVSEAQIRRPKTVPDLLSDRNRXPAAAPAAAALPKQPPKLLLKVTTMGSLGPVQVVMTPESTVGDLVAVAVRQYVKEGRRPILPSNDPSQFDLHYSQFSLESLDREEKLKDIGSRNFFLCPRKCDGEDGGATTPFASCSREAERASKGGAFGWLRFMDFSR 197          
BLAST of rna-XM_014664195.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445HNH9|A0A445HNH9_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_033735 PE=4 SV=1)

HSP 1 Score: 288.886 bits (738), Expect = 6.747e-97
Identity = 152/196 (77.55%), Postives = 162/196 (82.65%), Query Frame = 0
Query:    1 MQNSKNHRNGQAEPHRRGKLTNKSSSFHSHSSSTAGMPGASIRRPMTVPELLLDRNRSSPAATAEVVRRQPPKLLLKVTIMGSLGPVQVVMTTESAVGDLVAAAVNQYVKEGRRPILPSNDPSQFDLHYSQFTLESLDRNEKLSDIGSRNFFLCPRK--HGGGDGGSTTSFASCSTEADKTTKGGAFGWLRFMDLS 194
            M NSKN+RNGQ EPHRRGKLT KSSSF+ HSS  A M G  I RP TVP+LL +R+R++     EVV +QPPKLLLKVT MGSLGPVQVVMT ES VGDLVAAAV QYVKEGRRPILPSNDPS FDLHYSQF+LESLDR EKL DIGSRNFF+CPRK   GGGDG  TT FASCS EADKTTKGGAFGWLRFMD S
Sbjct:    1 MPNSKNNRNGQGEPHRRGKLTKKSSSFYGHSSP-AAMSGDPILRPKTVPDLLSERHRAAATPLVEVVPKQPPKLLLKVTSMGSLGPVQVVMTPESTVGDLVAAAVRQYVKEGRRPILPSNDPSHFDLHYSQFSLESLDREEKLRDIGSRNFFMCPRKCGGGGGDGRGTTPFASCSREADKTTKGGAFGWLRFMDFS 195          
BLAST of rna-XM_014664195.2 vs. UniProtKB/TrEMBL
Match: tr|I1LRC3|I1LRC3_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100792165 PE=4 SV=1)

HSP 1 Score: 288.886 bits (738), Expect = 6.747e-97
Identity = 152/196 (77.55%), Postives = 162/196 (82.65%), Query Frame = 0
Query:    1 MQNSKNHRNGQAEPHRRGKLTNKSSSFHSHSSSTAGMPGASIRRPMTVPELLLDRNRSSPAATAEVVRRQPPKLLLKVTIMGSLGPVQVVMTTESAVGDLVAAAVNQYVKEGRRPILPSNDPSQFDLHYSQFTLESLDRNEKLSDIGSRNFFLCPRK--HGGGDGGSTTSFASCSTEADKTTKGGAFGWLRFMDLS 194
            M NSKN+RNGQ EPHRRGKLT KSSSF+ HSS  A M G  I RP TVP+LL +R+R++     EVV +QPPKLLLKVT MGSLGPVQVVMT ES VGDLVAAAV QYVKEGRRPILPSNDPS FDLHYSQF+LESLDR EKL DIGSRNFF+CPRK   GGGDG  TT FASCS EADKTTKGGAFGWLRFMD S
Sbjct:    1 MPNSKNNRNGQGEPHRRGKLTKKSSSFYGHSSP-AAMSGDPILRPKTVPDLLSERHRAAATPLVEVVPKQPPKLLLKVTSMGSLGPVQVVMTPESTVGDLVAAAVRQYVKEGRRPILPSNDPSHFDLHYSQFSLESLDREEKLRDIGSRNFFMCPRKCGGGGGDGRGTTPFASCSREADKTTKGGAFGWLRFMDFS 195          
BLAST of rna-XM_014664195.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445I343|A0A445I343_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_030182 PE=4 SV=1)

HSP 1 Score: 285.419 bits (729), Expect = 1.677e-95
Identity = 149/198 (75.25%), Postives = 161/198 (81.31%), Query Frame = 0
Query:    1 MQNSKNHRNGQAEPHRRGKLTNKSSSFHSHSSSTAGMPGASIRRPMTVPELLLDRNRSSPAATA-EVVRRQPPKLLLKVTIMGSLGPVQVVMTTESAVGDLVAAAVNQYVKEGRRPILPSNDPSQFDLHYSQFTLESLDRNEKLSDIGSRNFFLCPRKHGG-GDGGS-TTSFASCSTEADKTTKGGAFGWLRFMDLSR 195
            M NSKN+RNG  EPHRR KLT KSSSF+ HSS  + M G  IRRP TVP+LL +R+R++ A  A +VV +QPPKLLLKVT MGSLGPVQVVMT ES VGDLVA  V QYVKEGRRPILPSNDPS FDLHYSQF+L+SLDR EKL DIGSRNFFLCPRK GG GD GS TT F SCS EADKT KGGAFGWLRFMD SR
Sbjct:    1 MPNSKNNRNGHGEPHRREKLTKKSSSFYGHSSPPS-MSGEPIRRPKTVPDLLSERHRAALATPATDVVPKQPPKLLLKVTPMGSLGPVQVVMTPESTVGDLVAVTVRQYVKEGRRPILPSNDPSHFDLHYSQFSLQSLDREEKLMDIGSRNFFLCPRKCGGNGDEGSGTTPFGSCSREADKTNKGGAFGWLRFMDFSR 197          
BLAST of rna-XM_014664195.2 vs. UniProtKB/TrEMBL
Match: tr|C6TDI1|C6TDI1_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100801688 PE=2 SV=1)

HSP 1 Score: 285.419 bits (729), Expect = 1.677e-95
Identity = 149/198 (75.25%), Postives = 161/198 (81.31%), Query Frame = 0
Query:    1 MQNSKNHRNGQAEPHRRGKLTNKSSSFHSHSSSTAGMPGASIRRPMTVPELLLDRNRSSPAATA-EVVRRQPPKLLLKVTIMGSLGPVQVVMTTESAVGDLVAAAVNQYVKEGRRPILPSNDPSQFDLHYSQFTLESLDRNEKLSDIGSRNFFLCPRKHGG-GDGGS-TTSFASCSTEADKTTKGGAFGWLRFMDLSR 195
            M NSKN+RNG  EPHRR KLT KSSSF+ HSS  + M G  IRRP TVP+LL +R+R++ A  A +VV +QPPKLLLKVT MGSLGPVQVVMT ES VGDLVA  V QYVKEGRRPILPSNDPS FDLHYSQF+L+SLDR EKL DIGSRNFFLCPRK GG GD GS TT F SCS EADKT KGGAFGWLRFMD SR
Sbjct:    1 MPNSKNNRNGHGEPHRREKLTKKSSSFYGHSSPPS-MSGEPIRRPKTVPDLLSERHRAALATPATDVVPKQPPKLLLKVTPMGSLGPVQVVMTPESTVGDLVAVTVRQYVKEGRRPILPSNDPSHFDLHYSQFSLQSLDREEKLMDIGSRNFFLCPRKCGGNGDEGSGTTPFGSCSREADKTNKGGAFGWLRFMDFSR 197          
The following BLAST results are available for this feature:
BLAST of rna-XM_014664195.2 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
sp|Q56XJ7|Y4276_ARATH1.181e-1333.06Uncharacterized protein At4g22758 OS=Arabidopsis t... [more]
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BLAST of rna-XM_014664195.2 vs. Araport11
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11)
Total hits: 3
Match NameE-valueIdentityDescription
AT2G27830.18.979e-5649.48| hypothetical protein | Chr2:11860734-11861306 FO... [more]
AT4G22758.11.208e-1433.06| PPR containing protein | Chr4:11958477-11959904 ... [more]
AT1G70780.16.299e-1134.15| hypothetical protein | Chr1:26695462-26695975 RE... [more]
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BLAST of rna-XM_014664195.2 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S3VMT5|A0A1S3VMT5_VIGRR1.829e-142100.00uncharacterized protein At4g22758-like OS=Vigna ra... [more]
tr|A0A0S3SCA5|A0A0S3SCA5_PHAAN1.358e-13796.92Uncharacterized protein OS=Vigna angularis var. an... [more]
tr|A0A0L9V6I6|A0A0L9V6I6_PHAAN1.358e-13796.92Uncharacterized protein OS=Phaseolus angularis OX=... [more]
tr|A0A4D6LHI1|A0A4D6LHI1_VIGUN3.874e-11191.37Uncharacterized protein OS=Vigna unguiculata OX=39... [more]
tr|V7AGG6|V7AGG6_PHAVU5.843e-10685.71Uncharacterized protein OS=Phaseolus vulgaris OX=3... [more]
tr|A0A151TNN0|A0A151TNN0_CAJCA6.873e-10076.65Uncharacterized protein At4g22760 family OS=Cajanu... [more]
tr|A0A445HNH9|A0A445HNH9_GLYSO6.747e-9777.55Uncharacterized protein OS=Glycine soja OX=3848 GN... [more]
tr|I1LRC3|I1LRC3_SOYBN6.747e-9777.55Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|A0A445I343|A0A445I343_GLYSO1.677e-9575.25Uncharacterized protein OS=Glycine soja OX=3848 GN... [more]
tr|C6TDI1|C6TDI1_SOYBN1.677e-9575.25Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0
Date Performed: 2023-06-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..49
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 24..38
IPR040358Uncharacterized protein At4g22758-likePANTHERPTHR33270BNAC05G50380D PROTEINcoord: 19..192

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-XM_014664195.2_VrVC1973A-SNU_v1 ID=rna-XM_014664195.2_VrVC1973A-SNU_v1; Name=rna-XM_014664195.2; organism=Vigna radiata; type=mRNA; length=588bp
ATGCAAAACTCGAAGAACCACCGCAACGGCCAGGCCGAGCCTCATCGCCG
GGGGAAGTTAACAAACAAATCCTCTTCCTTTCACAGTCACTCATCGTCAA
CCGCCGGCATGCCGGGCGCATCAATTCGGCGGCCAATGACGGTGCCGGAA
CTTCTGCTAGACAGAAACCGCTCCTCTCCGGCCGCGACGGCGGAGGTTGT
CCGGAGGCAACCTCCGAAGCTCTTGCTGAAGGTTACGATCATGGGAAGCC
TGGGTCCCGTGCAGGTGGTGATGACGACGGAATCCGCCGTCGGAGATTTA
GTAGCGGCGGCGGTGAACCAGTACGTTAAGGAAGGTCGCCGACCAATTCT
TCCGTCGAACGATCCTTCACAATTCGATCTTCACTATTCTCAGTTCACCT
TAGAAAGTTTGGACAGGAATGAGAAACTGAGCGATATCGGGTCTAGAAAT
TTCTTTCTGTGTCCGAGGAAGCATGGTGGTGGTGATGGTGGCTCGACGAC
GTCGTTTGCTTCGTGCTCTACAGAGGCTGACAAAACGACGAAGGGTGGTG
CGTTTGGATGGCTAAGGTTCATGGATTTGTCACGCTGA
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protein sequence of rna-XM_014664195.2_VrVC1973A-SNU_v1

>rna-XM_014664195.2_VrVC1973A-SNU_v1 ID=rna-XM_014664195.2_VrVC1973A-SNU_v1; Name=rna-XM_014664195.2_VrVC1973A-SNU_v1; organism=Vigna radiata; type=polypeptide; length=195bp
MQNSKNHRNGQAEPHRRGKLTNKSSSFHSHSSSTAGMPGASIRRPMTVPE
LLLDRNRSSPAATAEVVRRQPPKLLLKVTIMGSLGPVQVVMTTESAVGDL
VAAAVNQYVKEGRRPILPSNDPSQFDLHYSQFTLESLDRNEKLSDIGSRN
FFLCPRKHGGGDGGSTTSFASCSTEADKTTKGGAFGWLRFMDLSR
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mRNA from alignment at chr02:7378633..7380041-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-XM_014664195.2_VrVC1973A-SNU_v1 ID=rna-XM_014664195.2_VrVC1973A-SNU_v1; Name=rna-XM_014664195.2; organism=Vigna radiata; type=mRNA; length=1409bp; location=Sequence derived from: chr02:7378633..7380041- (Vigna radiata
GGCCAACCGCGTTTGGCCACAGTCAATCAAGTCCAACCTCGAAACCGTTC CAATCCCACTCTCTATAAATCTAACCCAAGCAATTCTACCACTCCAAAGC GAGAAAAAGTCCCACACCGAGAAAATCGATAACAACTCATGGAAAGTTTG TAGCGCCGCCATAACCCTACCTTTTTTCAATTTTTTTTTTTTGATTTTGC TCTTTTGTGGCCCTTAAATTACAGTTATACCCTTCTGGTTATGAGAGCTT CCAACCGGCGCAAGCCAGAGCCACCGAGCCGAAGCTCTTCTTCACTACTC GGCTTCCCTCGTCACAGATATTGCCGGTACCGCCGATTGAAATAGAGAGC CGCCGAGCCAGCCCAACAAACACTTCTCAAACTCCATCTTTACCCTTTCC TGTAAATATTCTTTCTTTTTTACTTAACGGTTCGTAACCACCATGCAAAA CTCGAAGAACCACCGCAACGGCCAGGCCGAGCCTCATCGCCGGGGGAAGT TAACAAACAAATCCTCTTCCTTTCACAGTCACTCATCGTCAACCGCCGGC ATGCCGGGCGCATCAATTCGGCGGCCAATGACGGTGCCGGAACTTCTGCT AGACAGAAACCGCTCCTCTCCGGCCGCGACGGCGGAGGTTGTCCGGAGGC AACCTCCGAAGCTCTTGCTGAAGGTTACGATCATGGGAAGCCTGGGTCCC GTGCAGGTGGTGATGACGACGGAATCCGCCGTCGGAGATTTAGTAGCGGC GGCGGTGAACCAGTACGTTAAGGAAGGTCGCCGACCAATTCTTCCGTCGA ACGATCCTTCACAATTCGATCTTCACTATTCTCAGTTCACCTTAGAAAGT AATCTTCCCTTACCAAAAAAAAAATGATTTTTTCTGAACGGAAAATCGTT AGGGATGTTAATTTTCTTGTTACTGTGTATGTATTCAGGTTTGGACAGGA ATGAGAAACTGAGCGATATCGGGTCTAGAAATTTCTTTCTGTGTCCGAGG AAGCATGGTGGTGGTGATGGTGGCTCGACGACGTCGTTTGCTTCGTGCTC TACAGAGGCTGACAAAACGACGAAGGGTGGTGCGTTTGGATGGCTAAGGT TCATGGATTTGTCACGCTGAAAATTACTGTTGGAGGATCCTACTATTTTA AAACAGTTATTTGCAGATATTTTTGTTAATAGATTTTTAATCTTTAATTA TTTGTAATTAATGGCCGATTAGTGTAAACAGAATATGTCGGCCATTTCTT ATTTAAATTTTTGGACGAATCTTCCTTTTTTATTTTTTTGGGTTTTTGGT CTCCTTCACGAGAAGCTATTCCATTCTGCAACTTGAAATGGTGCGCACAC AGTCTAGTTTCGTAATAAAAGCCAGTGATGTTGATATTTATAAATGATTC ATTTTTATA
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Coding sequence (CDS) from alignment at chr02:7378633..7380041-

>rna-XM_014664195.2_VrVC1973A-SNU_v1 ID=rna-XM_014664195.2_VrVC1973A-SNU_v1; Name=rna-XM_014664195.2; organism=Vigna radiata; type=CDS; length=588bp; location=Sequence derived from: chr02:7378633..7380041- (Vigna radiata
ATGCAAAACTCGAAGAACCACCGCAACGGCCAGGCCGAGCCTCATCGCCG
GGGGAAGTTAACAAACAAATCCTCTTCCTTTCACAGTCACTCATCGTCAA
CCGCCGGCATGCCGGGCGCATCAATTCGGCGGCCAATGACGGTGCCGGAA
CTTCTGCTAGACAGAAACCGCTCCTCTCCGGCCGCGACGGCGGAGGTTGT
CCGGAGGCAACCTCCGAAGCTCTTGCTGAAGGTTACGATCATGGGAAGCC
TGGGTCCCGTGCAGGTGGTGATGACGACGGAATCCGCCGTCGGAGATTTA
GTAGCGGCGGCGGTGAACCAGTACGTTAAGGAAGGTCGCCGACCAATTCT
TCCGTCGAACGATCCTTCACAATTCGATCTTCACTATTCTCAGTTCACCT
TAGAAAGTTTGGACAGGAATGAGAAACTGAGCGATATCGGGTCTAGAAAT
TTCTTTCTGTGTCCGAGGAAGCATGGTGGTGGTGATGGTGGCTCGACGAC
GTCGTTTGCTTCGTGCTCTACAGAGGCTGACAAAACGACGAAGGGTGGTG
CGTTTGGATGGCTAAGGTTCATGGATTTGTCACGCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR040358At4g22758-like