rna-XM_014664321.2

Transcript Overview


Name	rna-XM_014664321.2
Unique Name	rna-XM_014664321.2_VrVC1973A-SNU_v1
Type	mRNA
Organism	Vigna radiata (Mung bean, green gram)
Sequence length	768
Product	uncharacterized LOC106776828, transcript variant X4

References

External references for this mRNA


Database	Accession
GeneID	106776828
Genbank	XM_014664321.2

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
chr02	chromosome	chr02:8567649..8572437 -	Vigna radiata cv. VC1973A genome v6.0	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Vigna radiata cv. VC1973A genome v6.0	2023-06-13
InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0	2023-06-20
Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot	2023-06-20
Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11	2023-06-20
Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL	2023-06-20

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
asvrvL092	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
anvrvL0096	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anvrvL0275	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
asvrvL543	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
anvrvL0837	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anvrvL0925	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anvrvL1009	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anvrvL1068	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anvrvL1138	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
caivrvL041	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
caivrvL225	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
caivrvL642	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
cavrvL020	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
cavrvL192	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
cavrvL515	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
ccvrvL0177	Cajanus cajan Asha genome v1.0	Cajanus cajan
ccvrvL0364	Cajanus cajan Asha genome v1.0	Cajanus cajan
crvrvL030	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
crvrvL222	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
psvrvL169	Pisum sativum Cameor genome v1a	Pisum sativum
pvvrvL020	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
psvrvL380	Pisum sativum Cameor genome v1a	Pisum sativum
pvvrvL146	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
psvrvL639	Pisum sativum Cameor genome v1a	Pisum sativum
pvvrvL447	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
pvvrvL541	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
tifvrvL143	Vicia faba cv. Tiffany genome v1.0	Vicia faba
tifvrvL558	Vicia faba cv. Tiffany genome v1.0	Vicia faba
vfhvrvL150	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
vrvvssR224	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
vrvvssR242	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
vrvvssR274	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
vfhvrvL565	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
vfhvrvL673	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
vrvvuR198	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
vrvvuaR180	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
vrvzwsR208	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
vrvvuaR197	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
vrvvuR216	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
vrvzwsR227	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
canvrvL019	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
canvrvL175	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
canvrvL486	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
avjvrvL052	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
avjvrvL501	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
carvrvL028		Cicer arietinum
carvrvL176		Cicer arietinum
carvrvL478		Cicer arietinum
ccavrvL089	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
ccavrvL302	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
ccavrvL399	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
vrvvumR197	Vigna umbellata FF25 genome v1.0	Vigna umbellata
vrvvumR219	Vigna umbellata FF25 genome v1.0	Vigna umbellata
vrvvumR226	Vigna umbellata FF25 genome v1.0	Vigna umbellata
vrvvumR246	Vigna umbellata FF25 genome v1.0	Vigna umbellata
vrvvvaR222	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
vrvvvaR248	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
vrvvvaR264	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
vrvvstR207	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
vrvvstR213	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
vrvvstR235	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
vrvvstR237	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
vasvrvL467	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
vasvrvL509	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
pvfvrvL016	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
pvfvrvL140	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
pvfvrvL401	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
pvfvrvL500	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
vrvvunR191	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
vrvvunR209	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
gene-LOC106776828	gene-LOC106776828_VrVC1973A-SNU_v1	Vigna radiata	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
exon-XM_014664321.2-5	exon-XM_014664321.2-5_VrVC1973A-SNU_v1	Vigna radiata	exon
exon-XM_014664321.2-4	exon-XM_014664321.2-4_VrVC1973A-SNU_v1	Vigna radiata	exon
exon-XM_014664321.2-3	exon-XM_014664321.2-3_VrVC1973A-SNU_v1	Vigna radiata	exon
exon-XM_014664321.2-2	exon-XM_014664321.2-2_VrVC1973A-SNU_v1	Vigna radiata	exon
exon-XM_014664321.2-1	exon-XM_014664321.2-1_VrVC1973A-SNU_v1	Vigna radiata	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
cds-XP_014519807.1	cds-XP_014519807.1_VrVC1973A-SNU_v1_3	Vigna radiata	CDS
cds-XP_014519807.1	cds-XP_014519807.1_VrVC1973A-SNU_v1_2	Vigna radiata	CDS
cds-XP_014519807.1	cds-XP_014519807.1_VrVC1973A-SNU_v1	Vigna radiata	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
rna-XM_014664321.2_VrVC1973A-SNU_v1	rna-XM_014664321.2_VrVC1973A-SNU_v1	Vigna radiata	polypeptide
rna-XM_014664321.2_VrVC1973A-SNU_v1	rna-XM_014664321.2_VrVC1973A-SNU_v1-protein	Vigna radiata	polypeptide

Homology

[Close]

BLAST of rna-XM_014664321.2 vs. Araport11
Match: AT5G22040.3 (| ubiquitin carboxyl-terminal hydrolase | Chr5:7297154-7298363 REVERSE LENGTH=284 | 201606)

HSP 1 Score: 239.195 bits (609), Expect = 1.474e-78
Identity = 131/258 (50.78%), Postives = 178/258 (68.99%), Query Frame = 0

Query:   16 NFEGRLEAFTPERENPYANSKPEGQWRWEMDESKMSNSMASRMFSEGQ-GVDASKSYFQGQ-------GRNNNDSRSQA-HEEDMDVGYEGNHLSQTFEGLEQNFRDDIIKLTKEQNDAEDAEYARHREKINAINAQYEEKLAALRAQHSNRRAEFLQREAHARQQQYQQ----LIRDPYPS----SGMAPPRDPHGF-NNANAP-GVGGEVQRGYSADHFDPYRERARFLGGGRDQGFEPRGPYPGGRVYDTGSRYY 254
            +F+G+LEAFTPER+ PY++S+ EGQWRWE D   MS  MA+ +++EGQ GVD+S++Y++GQ        +  +D R+Q  H+E+   GY+ N   QTFEGLEQ F DDI +L K+Q +AEDAE ARHREKIN INA+YEE+LA LRA+H+ +R E +++E+ ARQQQ++Q    ++   +P+    + + P   P G+  +A  P  V     R Y +D F+ Y ERARF GG RD GFEPRGPYPGG VYDT SR+Y
Sbjct:   27 DFQGQLEAFTPERDQPYSDSQAEGQWRWERDGPNMSRPMATAVYNEGQQGVDSSRTYYRGQIDPKSGMEKQGSDPRAQPQHQENPKTGYDNNRGVQTFEGLEQKFMDDITRLAKDQIEAEDAEIARHREKINTINARYEEQLATLRARHTGKREEIMRKESLARQQQFKQQTMGMMDQYHPNVVGQANLMPSGHPQGYIGSAQDPAAVADAPPRSYGSDRFEAYGERARFQGGNRDHGFEPRGPYPGGNVYDTSSRFY 284

[Close]

BLAST of rna-XM_014664321.2 vs. Araport11
Match: AT5G22040.2 (| ubiquitin carboxyl-terminal hydrolase | Chr5:7297154-7298363 REVERSE LENGTH=284 | 201606)

HSP 1 Score: 239.195 bits (609), Expect = 1.474e-78
Identity = 131/258 (50.78%), Postives = 178/258 (68.99%), Query Frame = 0

Query:   16 NFEGRLEAFTPERENPYANSKPEGQWRWEMDESKMSNSMASRMFSEGQ-GVDASKSYFQGQ-------GRNNNDSRSQA-HEEDMDVGYEGNHLSQTFEGLEQNFRDDIIKLTKEQNDAEDAEYARHREKINAINAQYEEKLAALRAQHSNRRAEFLQREAHARQQQYQQ----LIRDPYPS----SGMAPPRDPHGF-NNANAP-GVGGEVQRGYSADHFDPYRERARFLGGGRDQGFEPRGPYPGGRVYDTGSRYY 254
            +F+G+LEAFTPER+ PY++S+ EGQWRWE D   MS  MA+ +++EGQ GVD+S++Y++GQ        +  +D R+Q  H+E+   GY+ N   QTFEGLEQ F DDI +L K+Q +AEDAE ARHREKIN INA+YEE+LA LRA+H+ +R E +++E+ ARQQQ++Q    ++   +P+    + + P   P G+  +A  P  V     R Y +D F+ Y ERARF GG RD GFEPRGPYPGG VYDT SR+Y
Sbjct:   27 DFQGQLEAFTPERDQPYSDSQAEGQWRWERDGPNMSRPMATAVYNEGQQGVDSSRTYYRGQIDPKSGMEKQGSDPRAQPQHQENPKTGYDNNRGVQTFEGLEQKFMDDITRLAKDQIEAEDAEIARHREKINTINARYEEQLATLRARHTGKREEIMRKESLARQQQFKQQTMGMMDQYHPNVVGQANLMPSGHPQGYIGSAQDPAAVADAPPRSYGSDRFEAYGERARFQGGNRDHGFEPRGPYPGGNVYDTSSRFY 284

[Close]

BLAST of rna-XM_014664321.2 vs. Araport11
Match: AT5G22040.1 (| ubiquitin carboxyl-terminal hydrolase | Chr5:7297154-7298363 REVERSE LENGTH=284 | 201606)

HSP 1 Score: 239.195 bits (609), Expect = 1.474e-78
Identity = 131/258 (50.78%), Postives = 178/258 (68.99%), Query Frame = 0

Query:   16 NFEGRLEAFTPERENPYANSKPEGQWRWEMDESKMSNSMASRMFSEGQ-GVDASKSYFQGQ-------GRNNNDSRSQA-HEEDMDVGYEGNHLSQTFEGLEQNFRDDIIKLTKEQNDAEDAEYARHREKINAINAQYEEKLAALRAQHSNRRAEFLQREAHARQQQYQQ----LIRDPYPS----SGMAPPRDPHGF-NNANAP-GVGGEVQRGYSADHFDPYRERARFLGGGRDQGFEPRGPYPGGRVYDTGSRYY 254
            +F+G+LEAFTPER+ PY++S+ EGQWRWE D   MS  MA+ +++EGQ GVD+S++Y++GQ        +  +D R+Q  H+E+   GY+ N   QTFEGLEQ F DDI +L K+Q +AEDAE ARHREKIN INA+YEE+LA LRA+H+ +R E +++E+ ARQQQ++Q    ++   +P+    + + P   P G+  +A  P  V     R Y +D F+ Y ERARF GG RD GFEPRGPYPGG VYDT SR+Y
Sbjct:   27 DFQGQLEAFTPERDQPYSDSQAEGQWRWERDGPNMSRPMATAVYNEGQQGVDSSRTYYRGQIDPKSGMEKQGSDPRAQPQHQENPKTGYDNNRGVQTFEGLEQKFMDDITRLAKDQIEAEDAEIARHREKINTINARYEEQLATLRARHTGKREEIMRKESLARQQQFKQQTMGMMDQYHPNVVGQANLMPSGHPQGYIGSAQDPAAVADAPPRSYGSDRFEAYGERARFQGGNRDHGFEPRGPYPGGNVYDTSSRFY 284

[Close]

BLAST of rna-XM_014664321.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3VN53|A0A1S3VN53_VIGRR (uncharacterized protein LOC106776828 isoform X1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106776828 PE=4 SV=1)

HSP 1 Score: 525.398 bits (1352), Expect = 0.000e+0
Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 0

Query:    1 MHHMVAGPRGEAKSGNFEGRLEAFTPERENPYANSKPEGQWRWEMDESKMSNSMASRMFSEGQGVDASKSYFQGQGRNNNDSRSQAHEEDMDVGYEGNHLSQTFEGLEQNFRDDIIKLTKEQNDAEDAEYARHREKINAINAQYEEKLAALRAQHSNRRAEFLQREAHARQQQYQQLIRDPYPSSGMAPPRDPHGFNNANAPGVGGEVQRGYSADHFDPYRERARFLGGGRDQGFEPRGPYPGGRVYDTGSRYYN 255
            MHHMVAGPRGEAKSGNFEGRLEAFTPERENPYANSKPEGQWRWEMDESKMSNSMASRMFSEGQGVDASKSYFQGQGRNNNDSRSQAHEEDMDVGYEGNHLSQTFEGLEQNFRDDIIKLTKEQNDAEDAEYARHREKINAINAQYEEKLAALRAQHSNRRAEFLQREAHARQQQYQQLIRDPYPSSGMAPPRDPHGFNNANAPGVGGEVQRGYSADHFDPYRERARFLGGGRDQGFEPRGPYPGGRVYDTGSRYYN
Sbjct:   20 MHHMVAGPRGEAKSGNFEGRLEAFTPERENPYANSKPEGQWRWEMDESKMSNSMASRMFSEGQGVDASKSYFQGQGRNNNDSRSQAHEEDMDVGYEGNHLSQTFEGLEQNFRDDIIKLTKEQNDAEDAEYARHREKINAINAQYEEKLAALRAQHSNRRAEFLQREAHARQQQYQQLIRDPYPSSGMAPPRDPHGFNNANAPGVGGEVQRGYSADHFDPYRERARFLGGGRDQGFEPRGPYPGGRVYDTGSRYYN 274

[Close]

BLAST of rna-XM_014664321.2 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3VNP2|A0A1S3VNP2_VIGRR (uncharacterized protein LOC106776828 isoform X2 OS=Vigna radiata var. radiata OX=3916 GN=LOC106776828 PE=4 SV=1)

HSP 1 Score: 525.013 bits (1351), Expect = 0.000e+0
Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 0

Query:    1 MHHMVAGPRGEAKSGNFEGRLEAFTPERENPYANSKPEGQWRWEMDESKMSNSMASRMFSEGQGVDASKSYFQGQGRNNNDSRSQAHEEDMDVGYEGNHLSQTFEGLEQNFRDDIIKLTKEQNDAEDAEYARHREKINAINAQYEEKLAALRAQHSNRRAEFLQREAHARQQQYQQLIRDPYPSSGMAPPRDPHGFNNANAPGVGGEVQRGYSADHFDPYRERARFLGGGRDQGFEPRGPYPGGRVYDTGSRYYN 255
            MHHMVAGPRGEAKSGNFEGRLEAFTPERENPYANSKPEGQWRWEMDESKMSNSMASRMFSEGQGVDASKSYFQGQGRNNNDSRSQAHEEDMDVGYEGNHLSQTFEGLEQNFRDDIIKLTKEQNDAEDAEYARHREKINAINAQYEEKLAALRAQHSNRRAEFLQREAHARQQQYQQLIRDPYPSSGMAPPRDPHGFNNANAPGVGGEVQRGYSADHFDPYRERARFLGGGRDQGFEPRGPYPGGRVYDTGSRYYN
Sbjct:    1 MHHMVAGPRGEAKSGNFEGRLEAFTPERENPYANSKPEGQWRWEMDESKMSNSMASRMFSEGQGVDASKSYFQGQGRNNNDSRSQAHEEDMDVGYEGNHLSQTFEGLEQNFRDDIIKLTKEQNDAEDAEYARHREKINAINAQYEEKLAALRAQHSNRRAEFLQREAHARQQQYQQLIRDPYPSSGMAPPRDPHGFNNANAPGVGGEVQRGYSADHFDPYRERARFLGGGRDQGFEPRGPYPGGRVYDTGSRYYN 255

[Close]

BLAST of rna-XM_014664321.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3SBZ7|A0A0S3SBZ7_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.06G155600 PE=4 SV=1)

HSP 1 Score: 517.694 bits (1332), Expect = 0.000e+0
Identity = 253/255 (99.22%), Postives = 254/255 (99.61%), Query Frame = 0

Query:    1 MHHMVAGPRGEAKSGNFEGRLEAFTPERENPYANSKPEGQWRWEMDESKMSNSMASRMFSEGQGVDASKSYFQGQGRNNNDSRSQAHEEDMDVGYEGNHLSQTFEGLEQNFRDDIIKLTKEQNDAEDAEYARHREKINAINAQYEEKLAALRAQHSNRRAEFLQREAHARQQQYQQLIRDPYPSSGMAPPRDPHGFNNANAPGVGGEVQRGYSADHFDPYRERARFLGGGRDQGFEPRGPYPGGRVYDTGSRYYN 255
            MHHMVAGPRGEAKSGNFEGRLEAFTPERENPYANSKPEGQWRWEMDESKMSNSMASRMFSEGQGVDASKSYFQGQGRNNNDSRSQAHEEDMDVGYEGNHLSQTFEGLEQNFRDDIIKLTKEQNDAEDAEYARHREKINAINAQYEEKLAALRAQHSNRRAEFLQREAHARQQQYQQLIRDPYPSSGMA PRDPHGFNNANAPGVGGEVQRGYSADHFDPY+ERARFLGGGRDQGFEPRGPYPGGRVYDTGSRYYN
Sbjct:   20 MHHMVAGPRGEAKSGNFEGRLEAFTPERENPYANSKPEGQWRWEMDESKMSNSMASRMFSEGQGVDASKSYFQGQGRNNNDSRSQAHEEDMDVGYEGNHLSQTFEGLEQNFRDDIIKLTKEQNDAEDAEYARHREKINAINAQYEEKLAALRAQHSNRRAEFLQREAHARQQQYQQLIRDPYPSSGMA-PRDPHGFNNANAPGVGGEVQRGYSADHFDPYKERARFLGGGRDQGFEPRGPYPGGRVYDTGSRYYN 273

[Close]

BLAST of rna-XM_014664321.2 vs. UniProtKB/TrEMBL
Match: tr|V7AI02|V7AI02_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_011G100200g PE=4 SV=1)

HSP 1 Score: 502.671 bits (1293), Expect = 3.528e-179
Identity = 247/255 (96.86%), Postives = 251/255 (98.43%), Query Frame = 0

Query:    1 MHHMVAGPRGEAKSGNFEGRLEAFTPERENPYANSKPEGQWRWEMDESKMSNSMASRMFSEGQGVDASKSYFQGQGRNNNDSRSQAHEEDMDVGYEGNHLSQTFEGLEQNFRDDIIKLTKEQNDAEDAEYARHREKINAINAQYEEKLAALRAQHSNRRAEFLQREAHARQQQYQQLIRDPYPSSGMAPPRDPHGFNNANAPGVGGEVQRGYSADHFDPYRERARFLGGGRDQGFEPRGPYPGGRVYDTGSRYYN 255
            MHHMVAGPRGEAKSGNFEGRLEAFTPERENPYANSK EGQWRWEMDESK+SNSMASRMFSEGQGVDASKSYFQGQ RNNNDSRSQAHEEDMDVGYEGNHLSQTFEGLEQNFRDDI+KLTKEQNDAEDAEYARHREKINAINAQYEEKLAALRAQHSNRRAEFLQREAHARQQQYQQ+IRDPYPSSGMA PRDPHGFNNANAP VGGEVQRGYSADHFDPYRERARFLGGGRDQGFEPRGPYPGGRVYDTGSRYY+
Sbjct:   20 MHHMVAGPRGEAKSGNFEGRLEAFTPERENPYANSKSEGQWRWEMDESKLSNSMASRMFSEGQGVDASKSYFQGQSRNNNDSRSQAHEEDMDVGYEGNHLSQTFEGLEQNFRDDIMKLTKEQNDAEDAEYARHREKINAINAQYEEKLAALRAQHSNRRAEFLQREAHARQQQYQQIIRDPYPSSGMA-PRDPHGFNNANAP-VGGEVQRGYSADHFDPYRERARFLGGGRDQGFEPRGPYPGGRVYDTGSRYYS 272

[Close]

BLAST of rna-XM_014664321.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9V615|A0A0L9V615_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan08g130300 PE=4 SV=1)

HSP 1 Score: 499.204 bits (1284), Expect = 1.768e-177
Identity = 251/278 (90.29%), Postives = 252/278 (90.65%), Query Frame = 0

Query:    1 MHHMVAGPRGEAKSGNFEGRLEAFTPERENPYANSKPEGQWRWEMDESKMSNSMASRM-----------------------FSEGQGVDASKSYFQGQGRNNNDSRSQAHEEDMDVGYEGNHLSQTFEGLEQNFRDDIIKLTKEQNDAEDAEYARHREKINAINAQYEEKLAALRAQHSNRRAEFLQREAHARQQQYQQLIRDPYPSSGMAPPRDPHGFNNANAPGVGGEVQRGYSADHFDPYRERARFLGGGRDQGFEPRGPYPGGRVYDTGSRYYN 255
            MHHMVAGPRGEAKSGNFEGRLEAFTPERENPYANSKPEGQWRWEMDESKMSNSMASRM                        S GQGVDASKSYFQGQGRNNNDSRSQAHEEDMDVGYEGNHLSQTFEGLEQNFRDDIIKLTKEQNDAEDAEYARHREKINAINAQYEEKLAALRAQHSNRRAEFLQREAHARQQQYQQLIRDPYPSSGMA PRDPHGFNNANAPGVGGEVQRGYSADHFDPY+ERARFLGGGRDQGFEPRGPYPGGRVYDTGSRYYN
Sbjct:   20 MHHMVAGPRGEAKSGNFEGRLEAFTPERENPYANSKPEGQWRWEMDESKMSNSMASRMPGYTGLYYGQSFQTPKQRGTVSCSSVGQGVDASKSYFQGQGRNNNDSRSQAHEEDMDVGYEGNHLSQTFEGLEQNFRDDIIKLTKEQNDAEDAEYARHREKINAINAQYEEKLAALRAQHSNRRAEFLQREAHARQQQYQQLIRDPYPSSGMA-PRDPHGFNNANAPGVGGEVQRGYSADHFDPYKERARFLGGGRDQGFEPRGPYPGGRVYDTGSRYYN 296

[Close]

BLAST of rna-XM_014664321.2 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6LHE9|A0A4D6LHE9_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG3g2513 PE=4 SV=1)

HSP 1 Score: 495.352 bits (1274), Expect = 1.011e-175
Identity = 251/297 (84.51%), Postives = 253/297 (85.19%), Query Frame = 0

Query:    1 MHHMVAGPRGEAKSGNFEGRLEAFTPERENPYANSKPEGQWRWEMDESKMSNSMASRMFSEG------------------------------------------QGVDASKSYFQGQGRNNNDSRSQAHEEDMDVGYEGNHLSQTFEGLEQNFRDDIIKLTKEQNDAEDAEYARHREKINAINAQYEEKLAALRAQHSNRRAEFLQREAHARQQQYQQLIRDPYPSSGMAPPRDPHGFNNANAPGVGGEVQRGYSADHFDPYRERARFLGGGRDQGFEPRGPYPGGRVYDTGSRYYN 255
            MHHMVAGPRGEAKSGNFEGRLEAFTPERENPYANSKPEGQWRWEMDESKMSNSM SRMFSEG                                          QGVDASKSYFQGQGR+NNDSRSQAHEEDMDVGYEGNHLSQTFEGLEQNFRDDIIKLTKEQNDAEDAEYARHREKINAINAQYEEKLAALRAQHSNRRAEFLQREAHARQQQYQQLIRDPYPSSGMA PRDPHGFNN+NAPGVGGEVQRGYSADHFDPYRERARFLGGGRDQGFEPRGPYPGGRVYDTGSRYYN
Sbjct:   20 MHHMVAGPRGEAKSGNFEGRLEAFTPERENPYANSKPEGQWRWEMDESKMSNSMTSRMFSEGKYFSLPLHTSSVSRRPGYTGLYYRKSFQTPKQRGTVSCSSVGQGVDASKSYFQGQGRSNNDSRSQAHEEDMDVGYEGNHLSQTFEGLEQNFRDDIIKLTKEQNDAEDAEYARHREKINAINAQYEEKLAALRAQHSNRRAEFLQREAHARQQQYQQLIRDPYPSSGMA-PRDPHGFNNSNAPGVGGEVQRGYSADHFDPYRERARFLGGGRDQGFEPRGPYPGGRVYDTGSRYYN 315

[Close]

BLAST of rna-XM_014664321.2 vs. UniProtKB/TrEMBL
Match: tr|A0A445I3M0|A0A445I3M0_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_030056 PE=4 SV=1)

HSP 1 Score: 456.447 bits (1173), Expect = 8.925e-161
Identity = 233/260 (89.62%), Postives = 240/260 (92.31%), Query Frame = 0

Query:    1 MHHMVAGPRGEAKSGNFEGRLEAFTPERENPYANSKPEGQWRWEMDESKMSNSMASRMFSEGQGVDASKSYFQGQGRNNNDSRSQAHEEDMDVGYEGNHLSQTFEGLEQNFRDDIIKLTKEQNDAEDAEYARHREKINAINAQYEEKLAALRAQHSNRRAEFLQREAHARQQQYQQLIRDPYPSSGMAP-----PRDPHGFNNANAPGVGGEVQRGYSADHFDPYRERARFLGGGRDQGFEPRGPYPGGRVYDTGSRYYN 255
            MHHM AG RGEAKSGNFEGRLEAFTPERENPY NSKPEGQWRWEMDESKMSNSMASRMF+EGQGVDASK YFQGQ RNN+DSRSQAHEEDMDV YEG HLSQ+FEGLEQNF DDIIKLTKEQNDAEDAEYARHREKINAINAQYEEKLAALRAQHS+RRAEFLQRE+HARQQQYQQ+IRDPYP  GMAP     PRDPHG+NN N  G GGEVQ GYSADHFDPYRERARFLGGGRDQGFEPRGPYPGGRVYDTGSRYYN
Sbjct:   21 MHHM-AGQRGEAKSGNFEGRLEAFTPERENPYGNSKPEGQWRWEMDESKMSNSMASRMFNEGQGVDASKPYFQGQSRNNSDSRSQAHEEDMDVRYEGEHLSQSFEGLEQNFHDDIIKLTKEQNDAEDAEYARHREKINAINAQYEEKLAALRAQHSSRRAEFLQRESHARQQQYQQIIRDPYPGGGMAPRDPHAPRDPHGYNNVNDSGAGGEVQLGYSADHFDPYRERARFLGGGRDQGFEPRGPYPGGRVYDTGSRYYN 279

[Close]

BLAST of rna-XM_014664321.2 vs. UniProtKB/TrEMBL
Match: tr|A0A151RBE8|A0A151RBE8_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_038970 PE=4 SV=1)

HSP 1 Score: 453.366 bits (1165), Expect = 1.610e-159
Identity = 235/264 (89.02%), Postives = 245/264 (92.80%), Query Frame = 0

Query:    1 MHHMVAGPRGEAKSGNFEGRLEAFTPERENPYANSKPEGQWRWEMDESKMSNSMASR-MFSEG--QGVDASKSYFQGQGRNNNDSRSQAHEEDMDVGYEGNHLSQTFEGLEQNFRDDIIKLTKEQNDAEDAEYARHREKINAINAQYEEKLAALRAQHSNRRAEFLQREAHARQQQYQQLIRDPYPSSGMAP-----PRDPHGFNNANAPGVG-GEVQRGYSADHFDPYRERARFLGGGRDQGFEPRGPYPGGRVYDTGSRYYN 255
            MH+M AG R EAKSGNFEGRLEAFTPERENPYANSKPEGQWRWEMDESKMSNSM SR MF+EG  QGVDASKSYFQGQ RNNNDSRSQAHEEDMDVGYEGNH+SQTFEGLEQNFRDDIIKLTKEQNDAEDAEYARHREKINAINAQYEEKLAALRAQHS+RRAEF QRE+HARQQQYQQ+IRDPYPSSG+AP     PRDPHG+NN NA G G GEVQRG+SADHFDPYRERARFLG GRDQGFEPRGPYPGGRVYDTGSR+YN
Sbjct:   20 MHYM-AGQRAEAKSGNFEGRLEAFTPERENPYANSKPEGQWRWEMDESKMSNSMTSRSMFNEGKCQGVDASKSYFQGQSRNNNDSRSQAHEEDMDVGYEGNHISQTFEGLEQNFRDDIIKLTKEQNDAEDAEYARHREKINAINAQYEEKLAALRAQHSSRRAEFFQRESHARQQQYQQIIRDPYPSSGVAPRDPHAPRDPHGYNNVNASGAGAGEVQRGFSADHFDPYRERARFLGSGRDQGFEPRGPYPGGRVYDTGSRFYN 282

[Close]

BLAST of rna-XM_014664321.2 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2PZR5|A0A0B2PZR5_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=glysoja_040596 PE=4 SV=1)

HSP 1 Score: 451.44 bits (1160), Expect = 8.684e-159
Identity = 233/262 (88.93%), Postives = 240/262 (91.60%), Query Frame = 0

Query:    1 MHHMVAGPRGEAKSGNFEGRLEAFTPERENPYANSKPEGQWRWEMDESKMSNSMASRMFSEG--QGVDASKSYFQGQGRNNNDSRSQAHEEDMDVGYEGNHLSQTFEGLEQNFRDDIIKLTKEQNDAEDAEYARHREKINAINAQYEEKLAALRAQHSNRRAEFLQREAHARQQQYQQLIRDPYPSSGMAP-----PRDPHGFNNANAPGVGGEVQRGYSADHFDPYRERARFLGGGRDQGFEPRGPYPGGRVYDTGSRYYN 255
            MHHM AG RGEAKSGNFEGRLEAFTPERENPY NSKPEGQWRWEMDESKMSNSMASRMF+EG  QGVDASK YFQGQ RNN+DSRSQAHEEDMDV YEG HLSQ+FEGLEQNF DDIIKLTKEQNDAEDAEYARHREKINAINAQYEEKLAALRAQHS+RRAEFLQRE+HARQQQYQQ+IRDPYP  GMAP     PRDPHG+NN N  G GGEVQ GYSADHFDPYRERARFLGGGRDQGFEPRGPYPGGRVYDTGSRYYN
Sbjct:   21 MHHM-AGQRGEAKSGNFEGRLEAFTPERENPYGNSKPEGQWRWEMDESKMSNSMASRMFNEGKCQGVDASKPYFQGQSRNNSDSRSQAHEEDMDVRYEGEHLSQSFEGLEQNFHDDIIKLTKEQNDAEDAEYARHREKINAINAQYEEKLAALRAQHSSRRAEFLQRESHARQQQYQQIIRDPYPGGGMAPRDPHAPRDPHGYNNVNDSGAGGEVQLGYSADHFDPYRERARFLGGGRDQGFEPRGPYPGGRVYDTGSRYYN 281

[Close]

BLAST of rna-XM_014664321.2 vs. UniProtKB/TrEMBL
Match: tr|I1LRM4|I1LRM4_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100789541 PE=4 SV=1)

HSP 1 Score: 444.506 bits (1142), Expect = 3.894e-156
Identity = 230/257 (89.49%), Postives = 240/257 (93.39%), Query Frame = 0

Query:    1 MHHMVAGPRGEAKSGNFEGRLEAFTPERENPYANSKPEGQ--WRWEMDESKMSNSMASRMFSEGQGVDASKSYFQGQGRNNNDSRSQAHEEDMDVGYEGNHLSQTFEGLEQNFRDDIIKLTKEQNDAEDAEYARHREKINAINAQYEEKLAALRAQHSNRRAEFLQREAHARQQQYQQLIRDPYPSSGMAPPRDPHGFNNANAPGVGGEVQRGYSADHFDPYRERARFLGGGRDQGFEPRGPYPGGRVYDTGSRYYN 255
            MHHM AG RGEAKSGNFEGRLEAFTP+RENPYANSK EGQ  WRWE+DE+KMSNSMASRMF+EGQGVDASKSYFQG  RNN+DSRSQAH EDMDVGYEGNHLSQ+FEGLEQNF DDIIKLTKEQNDAEDAEYARHREKINAINAQYEEKLAALRAQHS+RRAEFLQRE+HARQQQYQQ+IRDPYPS GMAP  DPHG+NN NA G  GEVQRGYSADH DPYRERARFLGGGRDQGFEPRGPYPGGRVYDTGSRYYN
Sbjct:   21 MHHM-AGQRGEAKSGNFEGRLEAFTPQRENPYANSKQEGQGQWRWEIDEAKMSNSMASRMFNEGQGVDASKSYFQGPSRNNSDSRSQAHGEDMDVGYEGNHLSQSFEGLEQNFHDDIIKLTKEQNDAEDAEYARHREKINAINAQYEEKLAALRAQHSSRRAEFLQRESHARQQQYQQIIRDPYPSGGMAPG-DPHGYNNVNASGT-GEVQRGYSADHLDPYRERARFLGGGRDQGFEPRGPYPGGRVYDTGSRYYN 274

The following BLAST results are available for this feature:

BLAST of rna-XM_014664321.2 vs.
BLAST of rna-XM_014664321.2 vs. Araport11
BLAST of rna-XM_014664321.2 vs. UniProtKB/TrEMBL

BLAST of rna-XM_014664321.2 vs.
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of rna-XM_014664321.2 vs. Araport11
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11)
Total hits: 3


Match Name	E-value	Identity	Description
AT5G22040.3	1.474e-78	50.78	\| ubiquitin carboxyl-terminal hydrolase \| Chr5:729...	[more]
AT5G22040.2	1.474e-78	50.78	\| ubiquitin carboxyl-terminal hydrolase \| Chr5:729...	[more]
AT5G22040.1	1.474e-78	50.78	\| ubiquitin carboxyl-terminal hydrolase \| Chr5:729...	[more]

BLAST of rna-XM_014664321.2 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
tr\|A0A1S3VN53\|A0A1S3VN53_VIGRR	0.000e+0	100.00	uncharacterized protein LOC106776828 isoform X1 OS...	[more]
tr\|A0A1S3VNP2\|A0A1S3VNP2_VIGRR	0.000e+0	100.00	uncharacterized protein LOC106776828 isoform X2 OS...	[more]
tr\|A0A0S3SBZ7\|A0A0S3SBZ7_PHAAN	0.000e+0	99.22	Uncharacterized protein OS=Vigna angularis var. an...	[more]
tr\|V7AI02\|V7AI02_PHAVU	3.528e-179	96.86	Uncharacterized protein OS=Phaseolus vulgaris OX=3...	[more]
tr\|A0A0L9V615\|A0A0L9V615_PHAAN	1.768e-177	90.29	Uncharacterized protein OS=Phaseolus angularis OX=...	[more]
tr\|A0A4D6LHE9\|A0A4D6LHE9_VIGUN	1.011e-175	84.51	Uncharacterized protein OS=Vigna unguiculata OX=39...	[more]
tr\|A0A445I3M0\|A0A445I3M0_GLYSO	8.925e-161	89.62	Uncharacterized protein OS=Glycine soja OX=3848 GN...	[more]
tr\|A0A151RBE8\|A0A151RBE8_CAJCA	1.610e-159	89.02	Uncharacterized protein OS=Cajanus cajan OX=3821 G...	[more]
tr\|A0A0B2PZR5\|A0A0B2PZR5_GLYSO	8.684e-159	88.93	Uncharacterized protein OS=Glycine soja OX=3848 GN...	[more]
tr\|I1LRM4\|I1LRM4_SOYBN	3.894e-156	89.49	Uncharacterized protein OS=Glycine max OX=3847 GN=...	[more]

InterPro

Analysis Name: InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0
Date Performed: 2023-06-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..255
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 214..229
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..81
None	No IPR available	PANTHER	PTHR34210	OS01G0252900 PROTEIN	coord: 78..253

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr02:8567649..8572437-
coding sequence from alignment at chr02:8567649..8572437-

mRNA sequence

>rna-XM_014664321.2_VrVC1973A-SNU_v1 ID=rna-XM_014664321.2_VrVC1973A-SNU_v1; Name=rna-XM_014664321.2; organism=Vigna radiata; type=mRNA; length=768bp
ATGCATCATATGGTAGCCGGTCCAAGGGGGGAGGCCAAGTCTGGTAATTT
TGAAGGACGGCTCGAAGCCTTTACTCCAGAAAGAGAGAATCCGTATGCGA
ATTCCAAGCCAGAGGGTCAGTGGAGATGGGAAATGGACGAATCGAAGATG
TCCAATTCAATGGCATCTCGAATGTTTAGTGAAGGTCAAGGGGTTGATGC
TTCAAAGTCCTATTTTCAAGGGCAGGGCCGGAACAACAATGATTCCAGAT
CTCAGGCTCATGAAGAAGATATGGATGTTGGATACGAAGGAAATCATTTA
TCACAAACTTTTGAAGGTCTTGAGCAGAATTTTCGTGATGACATTATTAA
ACTCACTAAAGAACAGAATGATGCTGAAGATGCAGAATATGCCAGACACA
GAGAGAAAATTAATGCAATCAATGCTCAGTATGAAGAAAAACTGGCAGCA
CTTCGAGCTCAGCATAGCAACCGAAGAGCTGAATTTCTTCAAAGGGAAGC
ACATGCTAGGCAACAACAGTACCAGCAACTCATAAGGGATCCTTACCCAA
GCAGTGGCATGGCACCACCCCGAGACCCTCATGGTTTCAACAATGCGAAT
GCTCCAGGTGTAGGTGGAGAAGTGCAACGAGGTTATTCTGCCGATCACTT
TGATCCTTACAGGGAGAGAGCTCGATTTCTTGGAGGTGGTAGAGATCAAG
GATTTGAACCTAGGGGTCCATATCCTGGTGGTCGTGTCTACGACACTGGT
TCACGCTACTACAATTGA

protein sequence of rna-XM_014664321.2_VrVC1973A-SNU_v1

>rna-XM_014664321.2_VrVC1973A-SNU_v1 ID=rna-XM_014664321.2_VrVC1973A-SNU_v1; Name=rna-XM_014664321.2_VrVC1973A-SNU_v1; organism=Vigna radiata; type=polypeptide; length=255bp
MHHMVAGPRGEAKSGNFEGRLEAFTPERENPYANSKPEGQWRWEMDESKM
SNSMASRMFSEGQGVDASKSYFQGQGRNNNDSRSQAHEEDMDVGYEGNHL
SQTFEGLEQNFRDDIIKLTKEQNDAEDAEYARHREKINAINAQYEEKLAA
LRAQHSNRRAEFLQREAHARQQQYQQLIRDPYPSSGMAPPRDPHGFNNAN
APGVGGEVQRGYSADHFDPYRERARFLGGGRDQGFEPRGPYPGGRVYDTG
SRYYN

mRNA from alignment at chr02:8567649..8572437-

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>rna-XM_014664321.2_VrVC1973A-SNU_v1 ID=rna-XM_014664321.2_VrVC1973A-SNU_v1; Name=rna-XM_014664321.2; organism=Vigna radiata; type=mRNA; length=4789bp; location=Sequence derived from: chr02:8567649..8572437- (Vigna radiata
TGTCTTTATTTTTTCCATGTGTATTTTGCAAATTGTGAGCAATGCTGGTA
GAATTACGGGTTCTTCCTCCTTCTTGAATTAGGGTTTTCAGATTTTCATT
TCACTCTCACTTCATCATCGTCGTCACCGGCAATGTCTTTTCCTTTGGAT
TGCTAACTGTCGAACATATCATTACATTTCCACTCTCGTTCCGTTTCGCT
AGCTCGATATTCCAAGTGCTAATTGATTCGGTACGTTATATAGCTCAGTT
GACATATTTTATCCTTTTTATTTTCCCGTTATTTTTCACGTTCTATACAC
TTGCTTGTCTTCTATGATTGATTTACTTAACTTTTTAGTTTGATTTCTTT
ATTCAACCCTAGGATTCTATGACTTATGTTTATTATACAGACTGATATGT
CTTGATGGTTCTATTTGGGATTATGTTCCCAGTTTGTAATTATTTTGAAA
TATATGTATCAATTTGTTTGTGGAATGTTTCATGTGAGAGCAAGTAATCG
GTACATGCATTTTTCTATATGATTGTAGTGTGGGTTATGTGGTTTAGTGA
TTGGTTTGGGTTTTGTGGTTTTGATGTCTCAGAGGTTGTGTTCACATAGG
CGTTGTTTGTGACAATGCGACGGCAGGGGCACTATGGGGATCCATCGGCC
AACACTAGTGTTGGTGGCCAGATGCATCATATGGTAGCCGGTCCAAGGGG
GGAGGCCAAGTCTGGTAATTTTGAAGGACGGCTCGAAGCCTTTACTCCAG
AAAGAGAGAATCCGTATGCGAATTCCAAGCCAGAGGGTCAGTGGAGATGG
GAAATGGACGAATCGAAGATGTCCAATTCAATGGCATCTCGAATGTTTAG
TGAAGGCAAGTATTTTTCGCTGCCACTTCACACTTGTTTATCCTTCTGTT
AACCTAGCTATGTGCTGCATCTGGCTTTGCGGAAACAATCATGTTTTTGA
AGTATGTCACGTGAGGGGCCCATATATCTTGAATTAGTAACTAAGTATTG
TTTTTACAAGTTTTTATGATTATTTAGTATAATTTATATTTTCATTTCTT
TCCATTTTTTTCATGAAATCGACAAAAATGTGGAGTCTTGAACCGTTGCT
TTTTCACTAAATAAAATATAGGATCTATGATGTAGTCTTAAAGGAGAATA
GTGTGTATGTATGATATATCTGCTGCTTTTTACGCTGTTGCCAGAACTAA
ATCACCTGATAAATGGCATAAGACAGAAAAATAACTCATGCTGCACTTGT
GTACTGAATTTTGTAAAAAAATACCGAGAAAATGAAAATGCTGAATTTGA
GAAAGAGTAAAGAGAAGATGAGGAAACAAAGAGATAGTAAATGAGACTAT
AAAGAAGACTAGGAAAAGAAGAGGAAGAGACGATATATGGTGTAGTCATA
GTTATCTAAAGTATTGTGGCTTAAATATGTTTTTTGTCCTCAAAAGTATG
ATATTTTTTGGTTTTAATTCCTATATAAGGTTTGTTTGTTTTTAGTCCCA
ACATTTTAAAAAATGTGGTTTTACTTTCAGGTGAGGGACTAAAAAAGCTC
ATGATTTTTGTAACTTTCAATGACTAAAAATCAATATAATATAAATATAT
ACATTTTTTTTTAATTTTGTGCGGAGAAATCTTCTCTACTAAATGAAAAA
AAAAAACAGTTAAGTTCCCTGTAGATTGTGATTGTTAACCTTTCTTCTGT
ATTTCAATATGGAGATTTTTGTTTCTAAATTAGAAGTGAGGTATTAGCGA
CTCAATTGGGCAGCATAATCCTTCAGAAAACAGATTAACAATTCACGTGA
CTAAATTGGGAAGCATAATCCTTTTAAACGTCATCCTTTCCAATTTGCTA
TTAAAGGCTATAGTTATTCTTGTTCCTGGCATCCTTTCTGCAAATTTTTC
TTCTTTTTCAATGAACTGACTTGAAAGTAGTACTTGATGTATAGGAGATG
AATTTATTTTACTTTTGATGTCTGCTTTTGAGGAGTTCTAATTCAGCAAA
CATAGCGCATTTTCAGAACCTATTTTAGTTTTGAATTTTTAAAACATTAG
CTTCCGTGTCTAGAAGGCCTGGTTACACAGGTTTATATTACGGAAAGAAT
TTTCAAACTCCTAAACAGAGGGGAACCGTTTCATGTTCTAGTGTAGGTCA
AGGGGTTGATGCTTCAAAGTCCTATTTTCAAGGGCAGGGCCGGAACAACA
ATGATTCCAGATCTCAGGCTCATGAAGAAGATATGGATGTTGGATACGAA
GGAAATCATTTATCACAAACTTTTGAAGGTCTTGAGCAGAATTTTCGTGA
TGACATTATTAAACTCACTAAAGAACAGAATGATGCTGAAGATGCAGAAT
ATGCCAGACACAGAGAGGTTTGTGATAAACATAAAAATAAACATTATTAA
TTTGTTTGTGTTCTTGAAATACCCTTTGTTCTCTACTCTTTTTGCAACTT
CTTCTGTCTTGTTTCTTTCTTTTTCCTAATAGATGTTAGACAGTTTACCT
TTTTTTGAAGCTGTTAAAGATACTGTATTGAAAGTTAGAAACACACCAAG
GTATCAGATACAGATCCTCTTAGAATTACGATTTACAGGGATCGAACTAT
GTCAATGCAAGCTTATCAACGGATTGCTATCCCCATTTATGGAAGGAAAA
AATTGTTTGTAATGGATAGTTTTCTTGTAACTTGTATACCTAGGCTTTTT
CCATTTGATAAACTTGAAGTCATTATGCAAATGCGAAACTGCAGTTATAT
ACTGCTCCTTTTGCATCTAGGTTGATAAACTTGACGTGATAATGCAAAAC
TTCGAATGCAGCAGTTGCGTTTACTTTTGTGCATCGTTTAAACTATATGA
ACTTGCCCAGTGTGTTGTCTGATCGTTCTGTGACCCATTTTTATGATACT
TCCTCAATATTAAATTGATGTGCAAAGTCATCTCTGCATGAGTATTCTTA
TTTTTTATTATTGAGTTGGGTTCTTCTCTTAGCTAACTGTGAGCACTGGG
CCAGTTGTTACCTGCATCTTTCCTTGTATTTTGAATAATCTATATAACTA
TGTCTTGAAGCTGGATATTTGCAGCACACTGGGTGTTGCAAGGATAATCT
TATTCGTGTTGAATTCTGTATATTTTTCAATTCCATTGAGCTTTAACTAA
GTTCTACATATTGCTTTTCAGAAAATTAATGCAATCAATGCTCAGTATGA
AGAAAAACTGGCAGCACTTCGAGCTCAGCATAGCAACCGAAGAGCTGAAT
TTCTTCAAAGGGAAGCACATGCTAGGCAACAACAGTACCAGCAACTCATA
AGGGATCCTTACCCAAGCAGTGGCATGGCACCACCCCGAGACCCTCATGG
TTTCAACAATGCGAATGCTCCAGGTGTAGGTGGAGAAGTGCAACGAGGTT
ATTCTGCCGATCACTTTGATCCTTACAGGGAGAGAGCTCGATTTCTTGGA
GGTGGTAGAGATCAAGGATTTGAACCTAGGGGTCCATATCCTGGTGGTCG
TGTCTACGACACTGGTTCACGCTACTACAATTGAGTTTTGACCCAAAGGT
TTATCTCTCATTTTGGGTTTCTACTGCAGGTGAAATTATATTTGACATGA
TCTAATGCTTTGTCGTTTTGTCATCTTTTCATTACCCTGTTTATGGAAGT
TAACTGTTATTTATATAGATCAACATTGGAGGTGCAACATTGCTGTTGTG
CATTTAGATGTAGAACCGCTAGGATATTTGTTGTTTGTGCTTATGAAAGT
CAATAACATAAAAAACTATGTAATACAGTATTTTATTTAATTCAACTGCA
TACGGAGAGATAGCATTACTCGGATAACTTGTAGCAAGCATCGATGCCAA
CCACACAAGAAGCATAGCAAAGCACCAAACCTTATGCTTTTGCTGCTGGT
CTTCGATGTTTGTGATTCAAATAGTAAAAAAACGCTTTAAACCAAACAGA
TAACAAACGAGTGAACCATTTTAGTTCCTAAATGTGTCTTGTTCACACCT
TGACTTTTGAAGCTAAGGAGATTATAAATAAGTTTCTACGCCTTACTATT
TATCGTCATGTTGGTCACTTATAATTTCAGTCACATTTTAATTTTTAAAG
TACTATGGTTGATCAATAATACTTTAGATAATCTTTTTAGTGTTTATCTT
TCAGTTTTAGGACTATTGTGATTGTTATACACTTTTAGGACTAAAGTGAT
TTCCTGGAAAAAAAAGAAAAAACTCTAAAATCCAAGCTGGGCACAAAAGA
ATATAGAATGGCCTTTAAATGTTTCAATGACTCATGATAGGACATATGTT
GCAGTATATCTAATGCCATAAATTTAATACCTTTATTAAGTGACTGATGT
TATATTATAAATAAGCAAGTTATTGTATAAAATTGTTTGGAGGGTGAAGA
ATGAGCAATTCATATAATTTTTGTAGTTAAACTTATACCATAAGTCTTTT
TATTCCAATTTCTTCCCCAGCCCATGTAACCGTACACACCATAGCCCTGC
ATGATCAGAAGGTGGGAGAAGAATGGTAGCGTTGGGGTGGACGCAATCGG
AGCTCAGGCAAGGAGAATACGGCAGAAGACGATGCTTCGAACCACTCGGT
GGGCCTGGATCGCGAACTTGTACAAGCCCATCAGATAGTGCTTCTTAAAG
AGCTTCTTTGCGATTCCAAGAAGACTGTTGTTGCGCATTGCATCTGTTGG
CACTGATTGGTTGTAGAGGGAGAACATCTTTTTAAGCTTTTTCGTTGGTT
TGTTGGTTTTAATTTTTCAAGTTTACTGGTTCTGATTTT

Coding sequence (CDS) from alignment at chr02:8567649..8572437-

>rna-XM_014664321.2_VrVC1973A-SNU_v1 ID=rna-XM_014664321.2_VrVC1973A-SNU_v1; Name=rna-XM_014664321.2; organism=Vigna radiata; type=CDS; length=768bp; location=Sequence derived from: chr02:8567649..8572437- (Vigna radiata
ATGCATCATATGGTAGCCGGTCCAAGGGGGGAGGCCAAGTCTGGTAATTT
TGAAGGACGGCTCGAAGCCTTTACTCCAGAAAGAGAGAATCCGTATGCGA
ATTCCAAGCCAGAGGGTCAGTGGAGATGGGAAATGGACGAATCGAAGATG
TCCAATTCAATGGCATCTCGAATGTTTAGTGAAGGTCAAGGGGTTGATGC
TTCAAAGTCCTATTTTCAAGGGCAGGGCCGGAACAACAATGATTCCAGAT
CTCAGGCTCATGAAGAAGATATGGATGTTGGATACGAAGGAAATCATTTA
TCACAAACTTTTGAAGGTCTTGAGCAGAATTTTCGTGATGACATTATTAA
ACTCACTAAAGAACAGAATGATGCTGAAGATGCAGAATATGCCAGACACA
GAGAGAAAATTAATGCAATCAATGCTCAGTATGAAGAAAAACTGGCAGCA
CTTCGAGCTCAGCATAGCAACCGAAGAGCTGAATTTCTTCAAAGGGAAGC
ACATGCTAGGCAACAACAGTACCAGCAACTCATAAGGGATCCTTACCCAA
GCAGTGGCATGGCACCACCCCGAGACCCTCATGGTTTCAACAATGCGAAT
GCTCCAGGTGTAGGTGGAGAAGTGCAACGAGGTTATTCTGCCGATCACTT
TGATCCTTACAGGGAGAGAGCTCGATTTCTTGGAGGTGGTAGAGATCAAG
GATTTGAACCTAGGGGTCCATATCCTGGTGGTCGTGTCTACGACACTGGT
TCACGCTACTACAATTGA

Search form

rna-XM_014664321.2