rna-XM_022778956.1

Transcript Overview
Namerna-XM_022778956.1
Unique Namerna-XM_022778956.1_VrVC1973A-SNU_v1
TypemRNA
OrganismVigna radiata (Mung bean, green gram)
Sequence length633
Productnon-specific lipid-transfer protein-like protein At5g64080, transcript variant X1
References
External references for this mRNA
DatabaseAccession
GeneID106757510
GenbankXM_022778956.1
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr03chromosomechr03:1418835..1420035 +Vigna radiata cv. VC1973A genome v6.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
asvrvL322Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvrvL335Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anvrvL0641Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL0763Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL0846Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL1078Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL1141Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
caivrvL229Cicer arietinum ICC 4958 genome v2Cicer arietinum
caivrvL240Cicer arietinum ICC 4958 genome v2Cicer arietinum
caivrvL337Cicer arietinum ICC 4958 genome v2Cicer arietinum
caivrvL343Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavrvL194Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavrvL293Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavrvL297Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvrvL0255Cajanus cajan Asha genome v1.0Cajanus cajan
ccvrvL0357Cajanus cajan Asha genome v1.0Cajanus cajan
ccvrvL0594Cajanus cajan Asha genome v1.0Cajanus cajan
crvrvL224Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crvrvL322Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
psvrvL181Pisum sativum Cameor genome v1aPisum sativum
pvvrvL023Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
psvrvL500Pisum sativum Cameor genome v1aPisum sativum
pvvrvL542Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvrvL546Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
tifvrvL343Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvrvL348Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvrvL561Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvrvL566Vicia faba cv. Tiffany genome v1.0Vicia faba
vrvvrvR142Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvrvL357Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvrvL363Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvssR301Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvssR324Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvssR343Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvrvL568Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvrvL571Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvuaR219Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvvuR239Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vrvzwsR260Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvvuaR241Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvvuaR244Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvzwsR284Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvvuR263Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vrvzwsR286Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvvuR267Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canvrvL177Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvrvL264Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvrvL268Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvrvL271Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvrvL283Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvrvL345Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvrvL179Cicer arietinum
carvrvL266Cicer arietinum
carvrvL269Cicer arietinum
ccavrvL217Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavrvL220Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavrvL305Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vrvvumR257Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvumR268Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvumR285Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvvaR279Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvvaR280Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvvaR316Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvstR256Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vrvvstR267Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vrvvstR270Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvrvL350Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvrvL552Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvrvL564Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvrvL019Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvrvL501Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvrvL505Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vrvvunR228Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vrvvunR249Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vrvvunR253Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LOC106757510gene-LOC106757510_VrVC1973A-SNU_v1Vigna radiatagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_022778956.1-1exon-XM_022778956.1-1_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_022778956.1-2exon-XM_022778956.1-2_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_022778956.1-3exon-XM_022778956.1-3_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_022778956.1-4exon-XM_022778956.1-4_VrVC1973A-SNU_v1Vigna radiataexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-XP_022634677.1cds-XP_022634677.1_VrVC1973A-SNU_v1Vigna radiataCDS
cds-XP_022634677.1cds-XP_022634677.1_VrVC1973A-SNU_v1_2Vigna radiataCDS
cds-XP_022634677.1cds-XP_022634677.1_VrVC1973A-SNU_v1_3Vigna radiataCDS
cds-XP_022634677.1cds-XP_022634677.1_VrVC1973A-SNU_v1_4Vigna radiataCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-XM_022778956.1_VrVC1973A-SNU_v1rna-XM_022778956.1_VrVC1973A-SNU_v1Vigna radiatapolypeptide
rna-XM_022778956.1_VrVC1973A-SNU_v1rna-XM_022778956.1_VrVC1973A-SNU_v1-proteinVigna radiatapolypeptide


Homology
[Close]
BLAST of rna-XM_022778956.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q94AX3|LTG16_ARATH (Non-specific lipid transfer protein GPI-anchored 16 OS=Arabidopsis thaliana OX=3702 GN=LTPG16 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.922e-26
Identity = 75/202 (37.13%), Postives = 116/202 (57.43%), Query Frame = 0 
Query:   10 IGVILTAFMVGLISSVSGQVSTSCTTSMMNSITPCANIITGSTNNNGLKPPSTCCDSLRSLMNTNTNCACFLLSANAPFFQ--LPLTLALSFSQACNINGLPLQCKASASPLPAPGPA-VLPSNGPTLSPLSPPADSKMVEEEKYQKIQLAAASSPAEAEAPSRSRIPQIRPVLTPLPSPSRSSFLSSPPYAFLVGIVLLCL 208
            I V++++FM+G       Q+ST CT+SM+++ TPC N ITGS+  + + P + CCDSL++L NT   CAC +L+AN P     +  TLAL+  +AC + G+P+QC+A+ +PLPAPG    L +  P +S  SP A     +       Q  A  +PA+      ++   IRPV  P+  P+  +  S+ P+  L+ I L+ L
Sbjct:    7 IVVMMSSFMLG---GQGQQISTPCTSSMISTFTPCLNFITGSSGGS-VTPTAGCCDSLKTLTNTGMGCACLILTANVPLPTGFINRTLALALPRACKMGGVPIQCQAAGTPLPAPGQVPFLIAPPPQVSAFSPGAS----KAAGTTPTQAPAPDTPADGPTGPTTKS-GIRPVDQPM-QPTGLAQSSTSPFLPLLFISLILL 198
[Close]
BLAST of rna-XM_022778956.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q1G2Y5|LTG21_ARATH (Non-specific lipid transfer protein GPI-anchored 21 OS=Arabidopsis thaliana OX=3702 GN=LTPG21 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 8.714e-22
Identity = 59/153 (38.56%), Postives = 90/153 (58.82%), Query Frame = 0 
Query:   23 SSVSGQVSTSCTTSMMNSITPCANIITGSTNNNGLKPPSTCCDSLRSLMNTNTNCACFLLSANAPFFQLPL--TLALSFSQACNINGLPLQCKASASPLPAPGPAVLPSNGPTLSPLSPPADSKMVEEEKYQKIQLAAASSPAEAEAPSRSRI 173
            +S+  Q++T C+ SM++S+T C + +TG     G  P S CC +L+SL  T  +C C +++A  P   +P+  TLA+S  +AC I G+P+QCKASA+PLP PGPA   S GPT S    P DS+  + E     +    +SP  ++ P+   +
Sbjct:   23 TSILAQINTPCSPSMLSSVTGCTSFLTG----GGSFPTSDCCGALKSLTGTGMDCLCLIVTAGVPI-SIPINRTLAISLPRACGIPGVPVQCKASAAPLPTPGPA---SFGPTTS----PTDSQTSDPEGSASFR--PPTSPTTSQTPNDKDL 161
[Close]
BLAST of rna-XM_022778956.1 vs. Araport11
Match: AT2G48140.1 (| Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | Chr2:19686442-19687444 FORWARD LENGTH=200 | 201606)

HSP 1 Score: 103.605 bits (257), Expect = 1.967e-27
Identity = 75/202 (37.13%), Postives = 116/202 (57.43%), Query Frame = 0 
Query:   10 IGVILTAFMVGLISSVSGQVSTSCTTSMMNSITPCANIITGSTNNNGLKPPSTCCDSLRSLMNTNTNCACFLLSANAPFFQ--LPLTLALSFSQACNINGLPLQCKASASPLPAPGPA-VLPSNGPTLSPLSPPADSKMVEEEKYQKIQLAAASSPAEAEAPSRSRIPQIRPVLTPLPSPSRSSFLSSPPYAFLVGIVLLCL 208
            I V++++FM+G       Q+ST CT+SM+++ TPC N ITGS+  + + P + CCDSL++L NT   CAC +L+AN P     +  TLAL+  +AC + G+P+QC+A+ +PLPAPG    L +  P +S  SP A     +       Q  A  +PA+      ++   IRPV  P+  P+  +  S+ P+  L+ I L+ L
Sbjct:    7 IVVMMSSFMLG---GQGQQISTPCTSSMISTFTPCLNFITGSSGGS-VTPTAGCCDSLKTLTNTGMGCACLILTANVPLPTGFINRTLALALPRACKMGGVPIQCQAAGTPLPAPGQVPFLIAPPPQVSAFSPGAS----KAAGTTPTQAPAPDTPADGPTGPTTKS-GIRPVDQPM-QPTGLAQSSTSPFLPLLFISLILL 198
[Close]
BLAST of rna-XM_022778956.1 vs. Araport11
Match: AT2G48140.2 (| Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | Chr2:19686442-19687157 FORWARD LENGTH=131 | 201606)

HSP 1 Score: 99.7525 bits (247), Expect = 1.166e-26
Identity = 53/116 (45.69%), Postives = 80/116 (68.97%), Query Frame = 0 
Query:   10 IGVILTAFMVGLISSVSGQVSTSCTTSMMNSITPCANIITGSTNNNGLKPPSTCCDSLRSLMNTNTNCACFLLSANAPF--FQLPLTLALSFSQACNINGLPLQCKASASPLPAPG 123
            I V++++FM+G       Q+ST CT+SM+++ TPC N ITGS+  + + P + CCDSL++L NT   CAC +L+AN P     +  TLAL+  +AC + G+P+QC+A+ +PLPAPG
Sbjct:    7 IVVMMSSFMLG---GQGQQISTPCTSSMISTFTPCLNFITGSSGGS-VTPTAGCCDSLKTLTNTGMGCACLILTANVPLPTGFINRTLALALPRACKMGGVPIQCQAAGTPLPAPG 118
[Close]
BLAST of rna-XM_022778956.1 vs. Araport11
Match: AT1G05450.2 (| Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | Chr1:1600004-1601086 FORWARD LENGTH=205 | 201606)

HSP 1 Score: 91.6633 bits (226), Expect = 8.915e-23
Identity = 59/153 (38.56%), Postives = 90/153 (58.82%), Query Frame = 0 
Query:   23 SSVSGQVSTSCTTSMMNSITPCANIITGSTNNNGLKPPSTCCDSLRSLMNTNTNCACFLLSANAPFFQLPL--TLALSFSQACNINGLPLQCKASASPLPAPGPAVLPSNGPTLSPLSPPADSKMVEEEKYQKIQLAAASSPAEAEAPSRSRI 173
            +S+  Q++T C+ SM++S+T C + +TG     G  P S CC +L+SL  T  +C C +++A  P   +P+  TLA+S  +AC I G+P+QCKASA+PLP PGPA   S GPT S    P DS+  + E     +    +SP  ++ P+   +
Sbjct:   23 TSILAQINTPCSPSMLSSVTGCTSFLTG----GGSFPTSDCCGALKSLTGTGMDCLCLIVTAGVPI-SIPINRTLAISLPRACGIPGVPVQCKASAAPLPTPGPA---SFGPTTS----PTDSQTSDPEGSASFR--PPTSPTTSQTPNDKDL 161
[Close]
BLAST of rna-XM_022778956.1 vs. Araport11
Match: AT3G22620.1 (| Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | Chr3:8008615-8009415 FORWARD LENGTH=203 | 201606)

HSP 1 Score: 57.3806 bits (137), Expect = 4.856e-10
Identity = 40/111 (36.04%), Postives = 63/111 (56.76%), Query Frame = 0 
Query:    9 QIGVILTAFMVGLISSVSGQVS--TSCTTSMMNSITPCANIITGSTNNNGLKPPSTCCDSLRSLMNTNTNCACFLLSANAPFFQLPL--TLALSFSQACNINGLPLQCKAS 115
            +I  ++ A +  L   + GQ    + CT SMM +++PC   IT S++N      S CC+SLRSL      C C +++   P F +P+  T A+S  +ACN+  +PLQC+A+
Sbjct:    3 KIISLVVAMIAVLALPIRGQQQPLSQCTPSMMTTVSPCMGFITNSSSNGTSPS-SDCCNSLRSLTTGGMGCLCLIVTGTVP-FNIPINRTTAVSLPRACNMPRVPLQCQAN 111
[Close]
BLAST of rna-XM_022778956.1 vs. UniProtKB/TrEMBL
Match: tr|A0A3Q0EX05|A0A3Q0EX05_VIGRR (non-specific lipid transfer protein GPI-anchored 2 isoform X1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106757510 PE=4 SV=1)

HSP 1 Score: 408.297 bits (1048), Expect = 1.162e-143
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0 
Query:    1 MLSSLMAFQIGVILTAFMVGLISSVSGQVSTSCTTSMMNSITPCANIITGSTNNNGLKPPSTCCDSLRSLMNTNTNCACFLLSANAPFFQLPLTLALSFSQACNINGLPLQCKASASPLPAPGPAVLPSNGPTLSPLSPPADSKMVEEEKYQKIQLAAASSPAEAEAPSRSRIPQIRPVLTPLPSPSRSSFLSSPPYAFLVGIVLLCLYS 210
            MLSSLMAFQIGVILTAFMVGLISSVSGQVSTSCTTSMMNSITPCANIITGSTNNNGLKPPSTCCDSLRSLMNTNTNCACFLLSANAPFFQLPLTLALSFSQACNINGLPLQCKASASPLPAPGPAVLPSNGPTLSPLSPPADSKMVEEEKYQKIQLAAASSPAEAEAPSRSRIPQIRPVLTPLPSPSRSSFLSSPPYAFLVGIVLLCLYS
Sbjct:    1 MLSSLMAFQIGVILTAFMVGLISSVSGQVSTSCTTSMMNSITPCANIITGSTNNNGLKPPSTCCDSLRSLMNTNTNCACFLLSANAPFFQLPLTLALSFSQACNINGLPLQCKASASPLPAPGPAVLPSNGPTLSPLSPPADSKMVEEEKYQKIQLAAASSPAEAEAPSRSRIPQIRPVLTPLPSPSRSSFLSSPPYAFLVGIVLLCLYS 210
[Close]
BLAST of rna-XM_022778956.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3TPE7|A0A1S3TPE7_VIGRR (non-specific lipid transfer protein GPI-anchored 2 isoform X2 OS=Vigna radiata var. radiata OX=3916 GN=LOC106757510 PE=4 SV=2)

HSP 1 Score: 402.134 bits (1032), Expect = 3.677e-141
Identity = 209/210 (99.52%), Postives = 209/210 (99.52%), Query Frame = 0 
Query:    1 MLSSLMAFQIGVILTAFMVGLISSVSGQVSTSCTTSMMNSITPCANIITGSTNNNGLKPPSTCCDSLRSLMNTNTNCACFLLSANAPFFQLPLTLALSFSQACNINGLPLQCKASASPLPAPGPAVLPSNGPTLSPLSPPADSKMVEEEKYQKIQLAAASSPAEAEAPSRSRIPQIRPVLTPLPSPSRSSFLSSPPYAFLVGIVLLCLYS 210
            MLSSLMAFQIGVILTAFMVGLISSVSGQVSTSCTTSMMNSITPCANIITGSTNNNGLKPPSTCCDSLRSLMNTNTNCACFLLSANAPFFQLPLTLALSFSQACNINGLPLQCKASASPLPAPGPAVLPSNGPTLSPLSPP DSKMVEEEKYQKIQLAAASSPAEAEAPSRSRIPQIRPVLTPLPSPSRSSFLSSPPYAFLVGIVLLCLYS
Sbjct:    1 MLSSLMAFQIGVILTAFMVGLISSVSGQVSTSCTTSMMNSITPCANIITGSTNNNGLKPPSTCCDSLRSLMNTNTNCACFLLSANAPFFQLPLTLALSFSQACNINGLPLQCKASASPLPAPGPAVLPSNGPTLSPLSPP-DSKMVEEEKYQKIQLAAASSPAEAEAPSRSRIPQIRPVLTPLPSPSRSSFLSSPPYAFLVGIVLLCLYS 209
[Close]
BLAST of rna-XM_022778956.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3RXY3|A0A0S3RXY3_PHAAN (AAI domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.04G301600 PE=4 SV=1)

HSP 1 Score: 348.977 bits (894), Expect = 3.334e-120
Identity = 195/210 (92.86%), Postives = 201/210 (95.71%), Query Frame = 0 
Query:    1 MLSSLMAFQIGVILTAFMVGLISSVSGQVSTSCTTSMMNSITPCANIITGSTNNNGLKPPSTCCDSLRSLMNTNTNCACFLLSANAPFFQLPLTLALSFSQACNINGLPLQCKASASPLPAPGPAVLPSNGPTLSPLSPPADSKMVEEEKYQKIQLAAASSPAEAEAPSRSRIPQIRPVLTPLPSPSRSSFLSSPPYAFLVGIVLLCLYS 210
            MLSSLMAFQIGVILTA +VG ++SV+GQVS+SCTTSMMNSITPCANIITGSTNNNGLKPPSTCCDSLRSLMNTNTNCACFLLSANAPFFQLPLTLALSFSQACNINGLPLQCKASASPLPAPGPAVL SN PTLSPLS P DSKMVEEEKYQK+QLAAAS PAEA APSRSRIPQIRPVLTPLPSPSRSSFLSSPPY FLVGIVLLCLYS
Sbjct:    1 MLSSLMAFQIGVILTALIVGSVNSVTGQVSSSCTTSMMNSITPCANIITGSTNNNGLKPPSTCCDSLRSLMNTNTNCACFLLSANAPFFQLPLTLALSFSQACNINGLPLQCKASASPLPAPGPAVLGSNAPTLSPLS-PQDSKMVEEEKYQKVQLAAASVPAEAGAPSRSRIPQIRPVLTPLPSPSRSSFLSSPPYDFLVGIVLLCLYS 209
[Close]
BLAST of rna-XM_022778956.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6M891|A0A4D6M891_VIGUN (AAI domain-containing protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG6g2313 PE=4 SV=1)

HSP 1 Score: 296.204 bits (757), Expect = 3.453e-99
Identity = 183/214 (85.51%), Postives = 192/214 (89.72%), Query Frame = 0 
Query:    1 MLSSLMAFQIGVILTAFMVGLISSVSGQVSTSCTTSMMNSITPCANIITGSTNNNGLKPPSTCCDSLRSLMNTNTNCACFLLSANAPFFQLPLTLALSFSQACNINGLPLQCKASASPLPAPGPAVLPSNGPTLSPLS--PPADSKMVEEEKYQKIQL--AAASSPAEAEAPSRSRIPQIRPVLTPLPSPSRSSFLSSPPYAFLVGIVLLCLYS 210
            ML SLMAFQIGVILTA  V  ++SV+GQVSTSCTTSMMNS TPCAN+ITGSTNNNGLKPPSTCCDSLRS MNTN+NCACFLLSANAPF QLPLTLALSFSQACNIN LPLQCKAS SPLPAPGPAVL SNGP LSP +     DSKMVEEEKY+K+QL  AAA+SPAEAEAPSRSRIPQIRPVLTPLPSPSRSSFLSSPP  FLVGIVLLCLYS
Sbjct:    1 MLLSLMAFQIGVILTALAVSSVNSVTGQVSTSCTTSMMNSFTPCANVITGSTNNNGLKPPSTCCDSLRSFMNTNSNCACFLLSANAPFLQLPLTLALSFSQACNINALPLQCKASGSPLPAPGPAVLGSNGPALSPGASNESKDSKMVEEEKYEKVQLAAAAAASPAEAEAPSRSRIPQIRPVLTPLPSPSRSSFLSSPPSTFLVGIVLLCLYS 214
[Close]
BLAST of rna-XM_022778956.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9T3H1|A0A0L9T3H1_PHAAN (AAI domain-containing protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan50s003200 PE=4 SV=1)

HSP 1 Score: 291.582 bits (745), Expect = 4.537e-98
Identity = 166/174 (95.40%), Postives = 167/174 (95.98%), Query Frame = 0 
Query:   37 MMNSITPCANIITGSTNNNGLKPPSTCCDSLRSLMNTNTNCACFLLSANAPFFQLPLTLALSFSQACNINGLPLQCKASASPLPAPGPAVLPSNGPTLSPLSPPADSKMVEEEKYQKIQLAAASSPAEAEAPSRSRIPQIRPVLTPLPSPSRSSFLSSPPYAFLVGIVLLCLYS 210
            MMNSITPCANIITGSTNNNGLKPPSTCCDSLRSLMNTNTNCACFLLSANAPFFQLPLTLALSFSQACNINGLPLQCKASASPLPAPGPAVL SN PTLSPLS P DSKMVEEEKYQK+QLAAAS PAEA APSRSRIPQIRPVLTPLPSPSRSSFLSSPPY FLVGIVLLCLYS
Sbjct:    1 MMNSITPCANIITGSTNNNGLKPPSTCCDSLRSLMNTNTNCACFLLSANAPFFQLPLTLALSFSQACNINGLPLQCKASASPLPAPGPAVLGSNAPTLSPLS-PQDSKMVEEEKYQKVQLAAASVPAEAGAPSRSRIPQIRPVLTPLPSPSRSSFLSSPPYDFLVGIVLLCLYS 173
[Close]
BLAST of rna-XM_022778956.1 vs. UniProtKB/TrEMBL
Match: tr|V7CW87|V7CW87_PHAVU (AAI domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_001G153600g PE=4 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 8.624e-92
Identity = 165/213 (77.46%), Postives = 181/213 (84.98%), Query Frame = 0 
Query:    6 MAFQIGVILTAFM-VGLISSVSGQVSTSCTTSMMNSITPCANIITGSTNNNGLKPPSTCCDSLRSLMNTNTNCACFLLSANAPFFQLPLT--LALSFSQACNINGLPLQCKASASPLPAPGPAVLPSNGPTL-----SPLSPPADSKMVEEEKYQKIQLAAASSPAEAEAPSRSRIPQIRPVLTPLPSPSRSSFLSSPPYAFLVGIVLLCLYS 210
            MAFQIG ILTA + V  ++SV+GQV+ SCTTSMM++ TPCANIITGSTNNNGL PPSTCCDSLRSLM TNT+CAC L+SA APFFQLP+T  L+LSFSQACNINGLPL CKAS S LPAPGPAVL SNGPTL     SPLS P DSKMVEEEKY+K+QLA ASSP EAEAPS  R+ QI PVLTP PSPSRSSFLSSPPYAFL+G+VLL LYS
Sbjct:    1 MAFQIGPILTALITVASLNSVNGQVTGSCTTSMMSTFTPCANIITGSTNNNGLMPPSTCCDSLRSLMTTNTDCACLLVSAYAPFFQLPITQALSLSFSQACNINGLPLHCKASGSNLPAPGPAVLGSNGPTLPSAAPSPLS-PQDSKMVEEEKYEKVQLAVASSPVEAEAPSGDRVSQIIPVLTPRPSPSRSSFLSSPPYAFLIGMVLLGLYS 212
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BLAST of rna-XM_022778956.1 vs. UniProtKB/TrEMBL
Match: tr|A0A3Q0ESE8|A0A3Q0ESE8_VIGRR (non-specific lipid-transfer protein-like protein At5g64080 isoform X3 OS=Vigna radiata var. radiata OX=3916 GN=LOC106757510 PE=4 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 4.032e-90
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0 
Query:    1 MLSSLMAFQIGVILTAFMVGLISSVSGQVSTSCTTSMMNSITPCANIITGSTNNNGLKPPSTCCDSLRSLMNTNTNCACFLLSANAPFFQLPLTLALSFSQACNINGLPLQCKASASPLPAPGPAVLPSNGPTLSPLSPP 140
            MLSSLMAFQIGVILTAFMVGLISSVSGQVSTSCTTSMMNSITPCANIITGSTNNNGLKPPSTCCDSLRSLMNTNTNCACFLLSANAPFFQLPLTLALSFSQACNINGLPLQCKASASPLPAPGPAVLPSNGPTLSPLSPP
Sbjct:    1 MLSSLMAFQIGVILTAFMVGLISSVSGQVSTSCTTSMMNSITPCANIITGSTNNNGLKPPSTCCDSLRSLMNTNTNCACFLLSANAPFFQLPLTLALSFSQACNINGLPLQCKASASPLPAPGPAVLPSNGPTLSPLSPP 140
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BLAST of rna-XM_022778956.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445FH05|A0A445FH05_GLYSO (AAI domain-containing protein OS=Glycine soja OX=3848 GN=D0Y65_051617 PE=4 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 6.219e-81
Identity = 142/218 (65.14%), Postives = 164/218 (75.23%), Query Frame = 0 
Query:    6 MAFQIGVILTAFMVGLISSVSGQVSTSCTTSMMNSITPCANIITGSTNNNGLKPPSTCCDSLRSLMNTNTNCACFLLSANAPFFQLPLT--LALSFSQACNINGLPLQCKASASPLPAPGPAVLPSNGPTL-----SPLSPPADSKMV---EEEKYQKIQLAA----ASSPAEAEAPSRSRIPQIRPVLTPLPSPSRSSFLSSPPYAFLVGIVLLCLY 209
            MAFQI VIL   +V  ++ V GQVSTSCTTSMM+S TPCANIITGSTNN GL PPSTCCD LRSLM+TN +CAC ++SANAPFFQ PL+  LALS SQACNING+PLQCKAS SPL  PGPAVL  N PTL     SPLS P DS+MV   + +KY+ +QLA     ASSP EAE P+R+RIPQIRPVLTP PS S SSF S   + F +GI++  +Y
Sbjct:    1 MAFQIRVILATLIVASVNLVYGQVSTSCTTSMMSSFTPCANIITGSTNN-GLVPPSTCCDLLRSLMSTNMDCACMVISANAPFFQQPLSQALALSLSQACNINGVPLQCKASGSPLLVPGPAVLGPNSPTLPSIATSPLS-PQDSRMVAMGKAQKYENMQLARELSPASSPVEAETPTRTRIPQIRPVLTPRPSASHSSFASPSAFPFFIGILVFGIY 216
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BLAST of rna-XM_022778956.1 vs. UniProtKB/TrEMBL
Match: tr|K7MYL7|K7MYL7_SOYBN (AAI domain-containing protein OS=Glycine max OX=3847 GN=100786841 PE=4 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 6.219e-81
Identity = 142/218 (65.14%), Postives = 164/218 (75.23%), Query Frame = 0 
Query:    6 MAFQIGVILTAFMVGLISSVSGQVSTSCTTSMMNSITPCANIITGSTNNNGLKPPSTCCDSLRSLMNTNTNCACFLLSANAPFFQLPLT--LALSFSQACNINGLPLQCKASASPLPAPGPAVLPSNGPTL-----SPLSPPADSKMV---EEEKYQKIQLAA----ASSPAEAEAPSRSRIPQIRPVLTPLPSPSRSSFLSSPPYAFLVGIVLLCLY 209
            MAFQI VIL   +V  ++ V GQVSTSCTTSMM+S TPCANIITGSTNN GL PPSTCCD LRSLM+TN +CAC ++SANAPFFQ PL+  LALS SQACNING+PLQCKAS SPL  PGPAVL  N PTL     SPLS P DS+MV   + +KY+ +QLA     ASSP EAE P+R+RIPQIRPVLTP PS S SSF S   + F +GI++  +Y
Sbjct:    1 MAFQIRVILATLIVASVNLVYGQVSTSCTTSMMSSFTPCANIITGSTNN-GLVPPSTCCDLLRSLMSTNMDCACMVISANAPFFQQPLSQALALSLSQACNINGVPLQCKASGSPLLVPGPAVLGPNSPTLPSIATSPLS-PQDSRMVAMGKAQKYENMQLARELSPASSPVEAETPTRTRIPQIRPVLTPRPSASHSSFASPSAFPFFIGILVFGIY 216
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BLAST of rna-XM_022778956.1 vs. UniProtKB/TrEMBL
Match: tr|A0A151RU63|A0A151RU63_CAJCA (AAI domain-containing protein OS=Cajanus cajan OX=3821 GN=KK1_032380 PE=4 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 1.471e-79
Identity = 149/240 (62.08%), Postives = 172/240 (71.67%), Query Frame = 0 
Query:    7 AFQIGVILTAFMVGLISSVSGQVSTSCTTSMMNSITPCANIITGSTNNNGLKPPSTCCDSLRSLMNTNTNCACFLLSANAPFFQLPLT--LALSFSQACNINGLPLQCKASASPLPAPGPAVLPSNGPTL-----SPLSPPAD---------------------------SKMV---EEEKYQKIQLAAASSPAEAEAPSRSRIPQIRPVLTPLPSPSRSSFLSSPPYAFLVGIVLLCLY 209
            AFQIGVIL A +V     V+GQ+STSCTTSMM+S TPCANIITGSTNNNGL PPSTCCDSLRSLM+TN +CAC ++SANAPFFQLPL+  LALS SQACNING+ LQCKAS SPL APGPAVL S+GPTL     SPLSP                              SK+V   E EKY+K++LAAASSP EAE P  +RIPQIRPVLTP PS S SS++S  P+AFL+GI++  +Y
Sbjct:    8 AFQIGVILAALVVASAKLVNGQISTSCTTSMMSSFTPCANIITGSTNNNGLTPPSTCCDSLRSLMSTNMDCACLMISANAPFFQLPLSQALALSLSQACNINGVSLQCKASGSPLSAPGPAVLGSSGPTLPSIATSPLSPQVYNCKTEVRPFFIKNKQSYFLLLLIYKRISKIVALEEAEKYEKVELAAASSPVEAEVP--TRIPQIRPVLTPRPSASPSSYVSPSPFAFLIGIMVFGIY 245
The following BLAST results are available for this feature:
BLAST of rna-XM_022778956.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot)
Total hits: 2
Match NameE-valueIdentityDescription
sp|Q94AX3|LTG16_ARATH1.922e-2637.13Non-specific lipid transfer protein GPI-anchored 1... [more]
sp|Q1G2Y5|LTG21_ARATH8.714e-2238.56Non-specific lipid transfer protein GPI-anchored 2... [more]
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BLAST of rna-XM_022778956.1 vs. Araport11
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11)
Total hits: 4
Match NameE-valueIdentityDescription
AT2G48140.11.967e-2737.13| Bifunctional inhibitor/lipid-transfer protein/se... [more]
AT2G48140.21.166e-2645.69| Bifunctional inhibitor/lipid-transfer protein/se... [more]
AT1G05450.28.915e-2338.56| Bifunctional inhibitor/lipid-transfer protein/se... [more]
AT3G22620.14.856e-1036.04| Bifunctional inhibitor/lipid-transfer protein/se... [more]
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BLAST of rna-XM_022778956.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A3Q0EX05|A0A3Q0EX05_VIGRR1.162e-143100.00non-specific lipid transfer protein GPI-anchored 2... [more]
tr|A0A1S3TPE7|A0A1S3TPE7_VIGRR3.677e-14199.52non-specific lipid transfer protein GPI-anchored 2... [more]
tr|A0A0S3RXY3|A0A0S3RXY3_PHAAN3.334e-12092.86AAI domain-containing protein OS=Vigna angularis v... [more]
tr|A0A4D6M891|A0A4D6M891_VIGUN3.453e-9985.51AAI domain-containing protein OS=Vigna unguiculata... [more]
tr|A0A0L9T3H1|A0A0L9T3H1_PHAAN4.537e-9895.40AAI domain-containing protein OS=Phaseolus angular... [more]
tr|V7CW87|V7CW87_PHAVU8.624e-9277.46AAI domain-containing protein OS=Phaseolus vulgari... [more]
tr|A0A3Q0ESE8|A0A3Q0ESE8_VIGRR4.032e-90100.00non-specific lipid-transfer protein-like protein A... [more]
tr|A0A445FH05|A0A445FH05_GLYSO6.219e-8165.14AAI domain-containing protein OS=Glycine soja OX=3... [more]
tr|K7MYL7|K7MYL7_SOYBN6.219e-8165.14AAI domain-containing protein OS=Glycine max OX=38... [more]
tr|A0A151RU63|A0A151RU63_CAJCA1.471e-7962.08AAI domain-containing protein OS=Cajanus cajan OX=... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0
Date Performed: 2023-06-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainPFAMPF14368LTP_2coord: 19..112
e-value: 8.2E-13
score: 48.4
IPR036312Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamilyGENE3D1.10.110.10coord: 30..115
e-value: 5.1E-8
score: 34.7
IPR036312Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamilySUPERFAMILY47699Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumincoord: 37..110
IPR043325Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) ProteinPANTHERPTHR33044BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATEDcoord: 18..150
NoneNo IPR availableCDDcd00010AAI_LTSScoord: 41..105
e-value: 6.78345E-8
score: 46.2659

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-XM_022778956.1_VrVC1973A-SNU_v1 ID=rna-XM_022778956.1_VrVC1973A-SNU_v1; Name=rna-XM_022778956.1; organism=Vigna radiata; type=mRNA; length=633bp
ATGCTCTCATCCCTCATGGCTTTTCAAATAGGAGTGATTCTGACAGCTTT
CATGGTGGGTTTAATAAGTTCGGTTAGTGGACAAGTTAGCACTTCTTGCA
CAACCTCTATGATGAACAGTATCACACCATGCGCCAACATCATCACAGGA
AGTACTAATAATAATGGTTTAAAGCCACCAAGTACGTGTTGTGATTCACT
GAGGTCTTTGATGAACACCAACACCAACTGTGCTTGCTTTCTGCTCTCTG
CCAATGCTCCATTTTTTCAACTACCCCTCACCCTTGCCCTATCATTTTCA
CAAGCATGCAACATCAATGGACTTCCTTTGCAGTGCAAAGCTTCTGCTTC
TCCTTTACCAGCTCCAGGTCCTGCAGTGCTTCCATCGAACGGTCCAACCC
TATCACCCTTGAGCCCACCAGCAGATTCAAAAATGGTTGAAGAAGAGAAA
TATCAGAAAATTCAATTGGCGGCGGCGTCCTCTCCGGCGGAAGCAGAAGC
ACCCAGTAGAAGTAGAATTCCACAGATCAGACCAGTGTTGACTCCACTTC
CTTCGCCATCTCGTTCATCTTTTCTCTCATCACCACCTTATGCTTTTCTC
GTAGGAATCGTGCTTTTGTGCCTCTATTCCTAA
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protein sequence of rna-XM_022778956.1_VrVC1973A-SNU_v1

>rna-XM_022778956.1_VrVC1973A-SNU_v1 ID=rna-XM_022778956.1_VrVC1973A-SNU_v1; Name=rna-XM_022778956.1_VrVC1973A-SNU_v1; organism=Vigna radiata; type=polypeptide; length=210bp
MLSSLMAFQIGVILTAFMVGLISSVSGQVSTSCTTSMMNSITPCANIITG
STNNNGLKPPSTCCDSLRSLMNTNTNCACFLLSANAPFFQLPLTLALSFS
QACNINGLPLQCKASASPLPAPGPAVLPSNGPTLSPLSPPADSKMVEEEK
YQKIQLAAASSPAEAEAPSRSRIPQIRPVLTPLPSPSRSSFLSSPPYAFL
VGIVLLCLYS
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mRNA from alignment at chr03:1418835..1420035+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-XM_022778956.1_VrVC1973A-SNU_v1 ID=rna-XM_022778956.1_VrVC1973A-SNU_v1; Name=rna-XM_022778956.1; organism=Vigna radiata; type=mRNA; length=1201bp; location=Sequence derived from: chr03:1418835..1420035+ (Vigna radiata
TATTGATGCTCTCATCCCTCATGGCTTTTCAAATAGGAGTGATTCTGACA
GCTTTCATGGTGGGTTTAATAAGTTCGGTTAGTGGACAAGTTAGCACTTC
TTGCACAACCTCTATGATGAACAGTATCACACCATGCGCCAACATCATCA
CAGGAAGTACTAATAATAATGGTTTAAAGCCACCAAGTACGTGTTGTGAT
TCACTGAGGTCTTTGATGAACACCAACACCAACTGTGCTTGCTTTCTGCT
CTCTGCCAATGCTCCATTTTTTCAACTACCCCTCACCCTTGCCCTATCAT
TTTCACAAGCATGCAACATCAATGGACTTCCTTTGCAGTGCAAAGGTTTG
CATCACAAGCTTAGCTTTCCCATTTTCATTTCTCATTATCAAATTACATT
TCTAATACTGTTCTTTTCGCAGCTTCTGCTTCTCCTTTACCAGCTCCAGG
TATTTTGCATTTTTCCagattatcaaaatttataccTTCCTTggtttcta
aatatatattattttttgttaggtCCTGCAGTGCTTCCATCGAACGGTCC
AACCCTATCACCCTTGAGCCCACCAGGTTCGTGAAAAATTGGCCTTAACA
AAAGACATGAATATAATGTTACtgctttttaaatttgaatagtaagttta
tatactaatttacaTAAGAGAAGTTTAGCAGATTCAAAAATGGTtgaaga
agagaaatatcagAAAATTCAATTGGCGGCGGCGTCCTCTCCGGCGGAAG
CAGAAGCACCCAGTAGAAGTAGAATTCCACAGATCAGACCAGTGTTGACT
CCACTTCCTTCGCCATCTCGTTCATCTTTTCTCTCATCACCACCTTATGC
TTTTCTCGTAGGAATCGTGCTTTTGTGCCTCTATTCCTAATTTTTATTGT
ACAATGCATTACACCAAAACCCTAATCCAATCACTCTGCACAACCTGCTT
TCTCTATGTTTCTGCTTACTCATACAAATAATAATGTTCTAGCAAATAAC
GAAATATTGAAACTTCACGGTCTCATTTCATGCATAGTTTCAAATTTGGA
TACATTAAGCGACACATCAATGTCTAATTTCTTGATCGTTTCATCTTCTG
CGTGGTTATGTGACTCATTATCAATCTTAGCCAAATTACCACTGCTGTAA
CAAGTTTTAAATCTGATATGAACAAGGTATAGAGATGATTCAGGTGGTGT
T
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Coding sequence (CDS) from alignment at chr03:1418835..1420035+

>rna-XM_022778956.1_VrVC1973A-SNU_v1 ID=rna-XM_022778956.1_VrVC1973A-SNU_v1; Name=rna-XM_022778956.1; organism=Vigna radiata; type=CDS; length=633bp; location=Sequence derived from: chr03:1418835..1420035+ (Vigna radiata
ATGCTCTCATCCCTCATGGCTTTTCAAATAGGAGTGATTCTGACAGCTTT
CATGGTGGGTTTAATAAGTTCGGTTAGTGGACAAGTTAGCACTTCTTGCA
CAACCTCTATGATGAACAGTATCACACCATGCGCCAACATCATCACAGGA
AGTACTAATAATAATGGTTTAAAGCCACCAAGTACGTGTTGTGATTCACT
GAGGTCTTTGATGAACACCAACACCAACTGTGCTTGCTTTCTGCTCTCTG
CCAATGCTCCATTTTTTCAACTACCCCTCACCCTTGCCCTATCATTTTCA
CAAGCATGCAACATCAATGGACTTCCTTTGCAGTGCAAAGCTTCTGCTTC
TCCTTTACCAGCTCCAGgtCCTGCAGTGCTTCCATCGAACGGTCCAACCC
TATCACCCTTGAGCCCACCAGCAGATTCAAAAATGGTtgaagaagagaaa
tatcagAAAATTCAATTGGCGGCGGCGTCCTCTCCGGCGGAAGCAGAAGC
ACCCAGTAGAAGTAGAATTCCACAGATCAGACCAGTGTTGACTCCACTTC
CTTCGCCATCTCGTTCATCTTTTCTCTCATCACCACCTTATGCTTTTCTC
GTAGGAATCGTGCTTTTGTGCCTCTATTCCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR016140Bifunc_inhib/LTP/seed_store
IPR036312Bifun_inhib/LTP/seed_sf
IPR043325LTSS