rna-XM_022779290.1

Transcript Overview
Namerna-XM_022779290.1
Unique Namerna-XM_022779290.1_VrVC1973A-SNU_v1
TypemRNA
OrganismVigna radiata (Mung bean, green gram)
Sequence length486
Productuncharacterized LOC106757135, transcript variant X3
References
External references for this mRNA
DatabaseAccession
GeneID106757135
GenbankXM_022779290.1
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr03chromosomechr03:6486530..6489880 +Vigna radiata cv. VC1973A genome v6.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
asvrvL112Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvrvL403Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anvrvL0557Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvrvL553Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anvrvL0642Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL0843Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL0845Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL0926Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL1014Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL1144Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
caivrvL226Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavrvL035Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavrvL193Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavrvL295Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavrvL528Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
crvrvL038Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ccvrvL0598Cajanus cajan Asha genome v1.0Cajanus cajan
ccvrvL0707Cajanus cajan Asha genome v1.0Cajanus cajan
crvrvL223Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ccvrvL0873Cajanus cajan Asha genome v1.0Cajanus cajan
crvrvL602Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
psvrvL180Pisum sativum Cameor genome v1aPisum sativum
pvvrvL022Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
psvrvL388Pisum sativum Cameor genome v1aPisum sativum
pvvrvL155Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
psvrvL496Pisum sativum Cameor genome v1aPisum sativum
pvvrvL455Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvrvL551Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
tifvrvL155Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvrvL346Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvrvL560Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvrvL663Vicia faba cv. Tiffany genome v1.0Vicia faba
vrvvrvL102Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvvrvR134Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvrvL162Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvrvL360Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvssR304Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvssR308Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvssR323Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvssR341Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvrvL567Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvrvL678Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvuaR218Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvvuR238Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vrvzwsR259Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvvuaR222Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvvuR242Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vrvvuaR229Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvzwsR267Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvvuR248Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vrvvuaR231Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvzwsR274Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvvuR253Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vrvzwsR289Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canvrvL033Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvrvL176Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvrvL266Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvrvL501Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvrvL065Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvrvL272Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvrvL344Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvrvL512Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvrvL035Cicer arietinum
carvrvL178Cicer arietinum
carvrvL259Cicer arietinum
carvrvL495Cicer arietinum
ccavrvL091Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavrvL214Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavrvL304Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavrvL407Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vrvvumR269Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvumR284Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvumR291Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvumR292Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvvaR278Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvvaR291Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvvaR306Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvvaR315Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvstR255Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vrvvstR263Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vrvvstR264Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vrvvstR282Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvrvL349Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvrvL479Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvrvL511Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvrvL565Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvrvL018Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvrvL150Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvrvL411Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvrvL510Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vrvvunR227Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vrvvunR231Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vrvvunR235Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vrvvunR239Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LOC106757135gene-LOC106757135_VrVC1973A-SNU_v1Vigna radiatagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_022779290.1-1exon-XM_022779290.1-1_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_022779290.1-2exon-XM_022779290.1-2_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_022779290.1-3exon-XM_022779290.1-3_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_022779290.1-4exon-XM_022779290.1-4_VrVC1973A-SNU_v1Vigna radiataexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-XP_022635011.1cds-XP_022635011.1_VrVC1973A-SNU_v1Vigna radiataCDS
cds-XP_022635011.1cds-XP_022635011.1_VrVC1973A-SNU_v1_2Vigna radiataCDS
cds-XP_022635011.1cds-XP_022635011.1_VrVC1973A-SNU_v1_3Vigna radiataCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-XM_022779290.1_VrVC1973A-SNU_v1rna-XM_022779290.1_VrVC1973A-SNU_v1Vigna radiatapolypeptide
rna-XM_022779290.1_VrVC1973A-SNU_v1rna-XM_022779290.1_VrVC1973A-SNU_v1-proteinVigna radiatapolypeptide


Homology
BLAST of rna-XM_022779290.1 vs. Araport11
Match: AT2G33180.1 (| hypothetical protein | Chr2:14066479-14067314 FORWARD LENGTH=166 | 201606)

HSP 1 Score: 151.754 bits (382), Expect = 2.854e-47
Identity = 68/93 (73.12%), Postives = 81/93 (87.10%), Query Frame = 0
Query:   69 PPLDLTEDNVRQALEDARQELSQIFDTSVGMTGVVELADLDGPFVKLSLRGRFWHKRSTVVARIANYLKQRIPEILEVDIEDEKQLDDSPENF 161
            PPLDLTEDN+   L +AR EL+Q+FD+SVG+TG VEL +LDGPFV +SLRG+FWH R+ V+AR+ NYLKQRIPEILEV+IEDEKQLDDSP NF
Sbjct:   74 PPLDLTEDNIHLVLSEARIELAQLFDSSVGITGQVELVELDGPFVTISLRGKFWHTRAMVLARLGNYLKQRIPEILEVNIEDEKQLDDSPANF 166          
BLAST of rna-XM_022779290.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3TN81|A0A1S3TN81_VIGRR (uncharacterized protein LOC106757135 OS=Vigna radiata var. radiata OX=3916 GN=LOC106757135 PE=4 SV=1)

HSP 1 Score: 333.183 bits (853), Expect = 1.797e-115
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0
Query:    1 MSLLQKGLCCVFDVRNHNVSSLNLSSAMVCTTANFHAPNPPSKTNLQSMGCGKARRILKPLSAALPVPPPLDLTEDNVRQALEDARQELSQIFDTSVGMTGVVELADLDGPFVKLSLRGRFWHKRSTVVARIANYLKQRIPEILEVDIEDEKQLDDSPENF 161
            MSLLQKGLCCVFDVRNHNVSSLNLSSAMVCTTANFHAPNPPSKTNLQSMGCGKARRILKPLSAALPVPPPLDLTEDNVRQALEDARQELSQIFDTSVGMTGVVELADLDGPFVKLSLRGRFWHKRSTVVARIANYLKQRIPEILEVDIEDEKQLDDSPENF
Sbjct:    1 MSLLQKGLCCVFDVRNHNVSSLNLSSAMVCTTANFHAPNPPSKTNLQSMGCGKARRILKPLSAALPVPPPLDLTEDNVRQALEDARQELSQIFDTSVGMTGVVELADLDGPFVKLSLRGRFWHKRSTVVARIANYLKQRIPEILEVDIEDEKQLDDSPENF 161          
BLAST of rna-XM_022779290.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3RZ96|A0A0S3RZ96_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.04G351500 PE=4 SV=1)

HSP 1 Score: 313.153 bits (801), Expect = 1.315e-107
Identity = 153/161 (95.03%), Postives = 153/161 (95.03%), Query Frame = 0
Query:    1 MSLLQKGLCCVFDVRNHNVSSLNLSSAMVCTTANFHAPNPPSKTNLQSMGCGKARRILKPLSAALPVPPPLDLTEDNVRQALEDARQELSQIFDTSVGMTGVVELADLDGPFVKLSLRGRFWHKRSTVVARIANYLKQRIPEILEVDIEDEKQLDDSPENF 161
            MSLLQKGLCCVF VRN NVSSLNLSS MVCT  NFHAPNPPSKTNLQSMG GKARRILKPLSAALPVPPPLDLTEDNVRQALEDAR EL QIFDTSVGMTGVVELADLDGPFVKLSLRGRFWHKRSTVVARIANYLKQRIPEILEVDIEDEKQLDDSPENF
Sbjct:    1 MSLLQKGLCCVFHVRNRNVSSLNLSSGMVCTATNFHAPNPPSKTNLQSMGRGKARRILKPLSAALPVPPPLDLTEDNVRQALEDARLELGQIFDTSVGMTGVVELADLDGPFVKLSLRGRFWHKRSTVVARIANYLKQRIPEILEVDIEDEKQLDDSPENF 161          
BLAST of rna-XM_022779290.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9U8K0|A0A0L9U8K0_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan03g247500 PE=4 SV=1)

HSP 1 Score: 313.153 bits (801), Expect = 1.315e-107
Identity = 153/161 (95.03%), Postives = 153/161 (95.03%), Query Frame = 0
Query:    1 MSLLQKGLCCVFDVRNHNVSSLNLSSAMVCTTANFHAPNPPSKTNLQSMGCGKARRILKPLSAALPVPPPLDLTEDNVRQALEDARQELSQIFDTSVGMTGVVELADLDGPFVKLSLRGRFWHKRSTVVARIANYLKQRIPEILEVDIEDEKQLDDSPENF 161
            MSLLQKGLCCVF VRN NVSSLNLSS MVCT  NFHAPNPPSKTNLQSMG GKARRILKPLSAALPVPPPLDLTEDNVRQALEDAR EL QIFDTSVGMTGVVELADLDGPFVKLSLRGRFWHKRSTVVARIANYLKQRIPEILEVDIEDEKQLDDSPENF
Sbjct:    1 MSLLQKGLCCVFHVRNRNVSSLNLSSGMVCTATNFHAPNPPSKTNLQSMGRGKARRILKPLSAALPVPPPLDLTEDNVRQALEDARLELGQIFDTSVGMTGVVELADLDGPFVKLSLRGRFWHKRSTVVARIANYLKQRIPEILEVDIEDEKQLDDSPENF 161          
BLAST of rna-XM_022779290.1 vs. UniProtKB/TrEMBL
Match: tr|V7D0B2|V7D0B2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_001G194300g PE=4 SV=1)

HSP 1 Score: 296.59 bits (758), Expect = 4.690e-101
Identity = 139/161 (86.34%), Postives = 151/161 (93.79%), Query Frame = 0
Query:    1 MSLLQKGLCCVFDVRNHNVSSLNLSSAMVCTTANFHAPNPPSKTNLQSMGCGKARRILKPLSAALPVPPPLDLTEDNVRQALEDARQELSQIFDTSVGMTGVVELADLDGPFVKLSLRGRFWHKRSTVVARIANYLKQRIPEILEVDIEDEKQLDDSPENF 161
            MS++QKGLCCVF +RNHNVS+LNLSS +VCTT N+HAP PPS TNLQSM  GKARR+LKPLSAALPVPPP+DLTE+NV+Q LEDARQEL QIFDTSVGMTGVVELADLDGPFVKLSLRGRFWH+RS V+ARIANYLKQRIPEILEVDIEDEKQLDDSPENF
Sbjct:    1 MSVIQKGLCCVFHIRNHNVSTLNLSSVVVCTTTNYHAPKPPSTTNLQSMTRGKARRMLKPLSAALPVPPPIDLTENNVKQVLEDARQELGQIFDTSVGMTGVVELADLDGPFVKLSLRGRFWHERSMVLARIANYLKQRIPEILEVDIEDEKQLDDSPENF 161          
BLAST of rna-XM_022779290.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6MBB7|A0A4D6MBB7_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG6g2819 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 8.994e-98
Identity = 152/161 (94.41%), Postives = 154/161 (95.65%), Query Frame = 0
Query:    1 MSLLQKGLCCVFDVRNHNVSSLNLSSAMVCTTANFHAPNPPSKTNLQSMGCGKARRILKPLSAALPVPPPLDLTEDNVRQALEDARQELSQIFDTSVGMTGVVELADLDGPFVKLSLRGRFWHKRSTVVARIANYLKQRIPEILEVDIEDEKQLDDSPENF 161
            MSLLQKGLCCVF +RNHNVSSLNLSSA+VCT  NFHAPNPPSKTNLQSM  GKARRILKPL AALPVPPPLDLTEDNVRQALEDARQEL QIFDTSVGMTGVVELADLDGPFVKLSLRGRFWHKRSTVVARIANYLKQRIPEILEVDIEDEKQLDDSPENF
Sbjct:    1 MSLLQKGLCCVFHIRNHNVSSLNLSSAVVCTATNFHAPNPPSKTNLQSMTRGKARRILKPLPAALPVPPPLDLTEDNVRQALEDARQELGQIFDTSVGMTGVVELADLDGPFVKLSLRGRFWHKRSTVVARIANYLKQRIPEILEVDIEDEKQLDDSPENF 161          
BLAST of rna-XM_022779290.1 vs. UniProtKB/TrEMBL
Match: tr|A0A371FSQ0|A0A371FSQ0_MUCPR (Uncharacterized protein OS=Mucuna pruriens OX=157652 GN=CR513_38162 PE=4 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 2.156e-85
Identity = 128/165 (77.58%), Postives = 140/165 (84.85%), Query Frame = 0
Query:    1 MSLLQKGLCCVFDVRNHNVSSLNLSSAMVCTTANFHAPNPPSKTN----LQSMGCGKARRILKPLSAALPVPPPLDLTEDNVRQALEDARQELSQIFDTSVGMTGVVELADLDGPFVKLSLRGRFWHKRSTVVARIANYLKQRIPEILEVDIEDEKQLDDSPENF 161
            MSLLQ GL   F +RNHNVSSLNLS+  V    N++AP PPSKT+    LQS   GK RR LKPLSAALPVPPPLDLTE+NVRQ L+DARQEL QIFDTSVGMTGVVELADLDGPFVK+SL+GRFWH+RS V+AR+ NYLKQRIPEILEVDIEDEKQLDDSPENF
Sbjct:    1 MSLLQNGLYGGFHIRNHNVSSLNLSAGAVT---NYNAPKPPSKTSPNSPLQSTTRGKRRRTLKPLSAALPVPPPLDLTENNVRQVLDDARQELGQIFDTSVGMTGVVELADLDGPFVKISLKGRFWHQRSMVLARVGNYLKQRIPEILEVDIEDEKQLDDSPENF 162          
BLAST of rna-XM_022779290.1 vs. UniProtKB/TrEMBL
Match: tr|C6SWB3|C6SWB3_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 2.457e-84
Identity = 130/167 (77.84%), Postives = 142/167 (85.03%), Query Frame = 0
Query:    1 MSLLQKGLCCVFDVRNHN-VSSLNLSSAMVCTTANFHAPNPPSKTN----LQSMGCGKARR-ILKPLSAALPVPPPLDLTEDNVRQALEDARQELSQIFDTSVGMTGVVELADLDGPFVKLSLRGRFWHKRSTVVARIANYLKQRIPEILEVDIEDEKQLDDSPENF 161
            MSLLQKGLCCVFD+RNHN VSSLNLS        N+HA  P SKT     LQS+  GK RR +LKP+SAALP PPPLDLTE+NV+Q L+DAR+EL QIFDTSVGMTGVVELADLDGPFVK+SL GRFWHKRSTV+AR+ANYLKQRIPEILEVDIEDEKQLDDSPENF
Sbjct:    1 MSLLQKGLCCVFDIRNHNNVSSLNLS------ITNYHAAKPLSKTTTYSPLQSLTRGKPRRRMLKPISAALPAPPPLDLTENNVKQVLDDARKELGQIFDTSVGMTGVVELADLDGPFVKISLSGRFWHKRSTVLARVANYLKQRIPEILEVDIEDEKQLDDSPENF 161          
BLAST of rna-XM_022779290.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445LEH7|A0A445LEH7_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_007695 PE=4 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 2.457e-84
Identity = 130/167 (77.84%), Postives = 142/167 (85.03%), Query Frame = 0
Query:    1 MSLLQKGLCCVFDVRNHN-VSSLNLSSAMVCTTANFHAPNPPSKTN----LQSMGCGKARR-ILKPLSAALPVPPPLDLTEDNVRQALEDARQELSQIFDTSVGMTGVVELADLDGPFVKLSLRGRFWHKRSTVVARIANYLKQRIPEILEVDIEDEKQLDDSPENF 161
            MSLLQKGLCCVFD+RNHN VSSLNLS        N+HA  P SKT     LQS+  GK RR +LKP+SAALP PPPLDLTE+NV+Q L+DAR+EL QIFDTSVGMTGVVELADLDGPFVK+SL GRFWHKRSTV+AR+ANYLKQRIPEILEVDIEDEKQLDDSPENF
Sbjct:    1 MSLLQKGLCCVFDIRNHNNVSSLNLS------ITNYHAAKPLSKTTTYSPLQSLTRGKPRRRMLKPISAALPAPPPLDLTENNVKQVLDDARKELGQIFDTSVGMTGVVELADLDGPFVKISLSGRFWHKRSTVLARVANYLKQRIPEILEVDIEDEKQLDDSPENF 161          
BLAST of rna-XM_022779290.1 vs. UniProtKB/TrEMBL
Match: tr|I1JQ74|I1JQ74_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_03G200700 PE=4 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 4.297e-84
Identity = 130/167 (77.84%), Postives = 142/167 (85.03%), Query Frame = 0
Query:    1 MSLLQKGLCCVFDVRNHN-VSSLNLSSAMVCTTANFHAPNPPSKTN----LQSMGCGKARR-ILKPLSAALPVPPPLDLTEDNVRQALEDARQELSQIFDTSVGMTGVVELADLDGPFVKLSLRGRFWHKRSTVVARIANYLKQRIPEILEVDIEDEKQLDDSPENF 161
            MSLLQKGLCCVFD+RNHN VSSLNLS        N+HA  P SKT     LQS+  GK RR +LKP+SAALP PPPLDLTE+NV+Q L+DAR+EL QIFDTSVGMTGVVELADLDGPFVK+SL GRFWHKRSTV+AR+ANYLKQRIPEILEVDIEDEKQLDDSPENF
Sbjct:    1 MSLLQKGLCCVFDIRNHNNVSSLNLS------ITNYHAAKPLSKTATYSPLQSLTRGKPRRRMLKPISAALPAPPPLDLTENNVKQVLDDARKELGQIFDTSVGMTGVVELADLDGPFVKISLSGRFWHKRSTVLARVANYLKQRIPEILEVDIEDEKQLDDSPENF 161          
BLAST of rna-XM_022779290.1 vs. UniProtKB/TrEMBL
Match: tr|C6T1T6|C6T1T6_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 1.529e-81
Identity = 127/164 (77.44%), Postives = 144/164 (87.80%), Query Frame = 0
Query:    1 MSLLQKGLCCVFDVRNHNVSSLNLSSAMVCTTA--NFHAPNPPSKTNLQSMGCGKARRIL-KPLSAALPVPPPLDLTEDNVRQALEDARQELSQIFDTSVGMTGVVELADLDGPFVKLSLRGRFWHKRSTVVARIANYLKQRIPEILEVDIEDEKQLDDSPENF 161
            MSLLQKGLCCVFD+RN NV SL L S   C+T   NFHAPN  S + LQS+  GK+RR++ KP+SAALP PPPLDLTE+NV+Q LEDAR+EL QIFD+SVG+TGVVELADLDGPFVK+SL+GRFWHKRSTV+AR+ANYLKQRIPEILEVDIEDEKQLDDSPENF
Sbjct:    1 MSLLQKGLCCVFDIRN-NVRSLRLPS---CSTRIRNFHAPNN-SNSPLQSLTRGKSRRMISKPISAALPAPPPLDLTENNVKQVLEDARKELGQIFDSSVGITGVVELADLDGPFVKISLKGRFWHKRSTVLARVANYLKQRIPEILEVDIEDEKQLDDSPENF 159          
The following BLAST results are available for this feature:
BLAST of rna-XM_022779290.1 vs.
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of rna-XM_022779290.1 vs. Araport11
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11)
Total hits: 1
Match NameE-valueIdentityDescription
AT2G33180.12.854e-4773.12| hypothetical protein | Chr2:14066479-14067314 FO... [more]
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BLAST of rna-XM_022779290.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S3TN81|A0A1S3TN81_VIGRR1.797e-115100.00uncharacterized protein LOC106757135 OS=Vigna radi... [more]
tr|A0A0S3RZ96|A0A0S3RZ96_PHAAN1.315e-10795.03Uncharacterized protein OS=Vigna angularis var. an... [more]
tr|A0A0L9U8K0|A0A0L9U8K0_PHAAN1.315e-10795.03Uncharacterized protein OS=Phaseolus angularis OX=... [more]
tr|V7D0B2|V7D0B2_PHAVU4.690e-10186.34Uncharacterized protein OS=Phaseolus vulgaris OX=3... [more]
tr|A0A4D6MBB7|A0A4D6MBB7_VIGUN8.994e-9894.41Uncharacterized protein OS=Vigna unguiculata OX=39... [more]
tr|A0A371FSQ0|A0A371FSQ0_MUCPR2.156e-8577.58Uncharacterized protein OS=Mucuna pruriens OX=1576... [more]
tr|C6SWB3|C6SWB3_SOYBN2.457e-8477.84Uncharacterized protein OS=Glycine max OX=3847 PE=... [more]
tr|A0A445LEH7|A0A445LEH7_GLYSO2.457e-8477.84Uncharacterized protein OS=Glycine soja OX=3848 GN... [more]
tr|I1JQ74|I1JQ74_SOYBN4.297e-8477.84Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|C6T1T6|C6T1T6_SOYBN1.529e-8177.44Uncharacterized protein OS=Glycine max OX=3847 PE=... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0
Date Performed: 2023-06-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR034904Fe-S cluster assembly domain superfamilyGENE3D3.30.300.130coord: 70..148
e-value: 1.9E-16
score: 61.9
IPR034904Fe-S cluster assembly domain superfamilySUPERFAMILY117916Fe-S cluster assembly (FSCA) domain-likecoord: 100..147
NoneNo IPR availablePANTHERPTHR36018OS09G0481800 PROTEINcoord: 27..161

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-XM_022779290.1_VrVC1973A-SNU_v1 ID=rna-XM_022779290.1_VrVC1973A-SNU_v1; Name=rna-XM_022779290.1; organism=Vigna radiata; type=mRNA; length=486bp
ATGTCCTTATTACAGAAGGGCCTGTGTTGTGTCTTTGACGTCCGTAACCA
CAATGTAAGCTCTCTCAACCTCTCATCGGCAATGGTATGCACCACCGCCA
ATTTCCATGCCCCAAATCCCCCATCCAAAACAAACCTTCAATCGATGGGA
TGTGGCAAAGCAAGGAGGATCTTGAAACCTCTATCAGCGGCTCTTCCCGT
TCCACCGCCGCTTGACCTCACAGAAGACAACGTGAGACAGGCTTTGGAGG
ACGCTCGACAGGAGCTGAGTCAAATCTTTGACACCTCTGTTGGTATGACA
GGAGTGGTTGAACTAGCTGACTTGGATGGACCTTTTGTAAAGCTTAGCCT
TAGGGGTCGCTTTTGGCACAAGCGTTCCACGGTCGTAGCCAGAATCGCCA
ATTATCTCAAACAGAGGATTCCTGAGATTTTGGAGGTTGACATAGAAGAC
GAGAAACAATTGGATGATAGTCCTGAGAATTTTTAA
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protein sequence of rna-XM_022779290.1_VrVC1973A-SNU_v1

>rna-XM_022779290.1_VrVC1973A-SNU_v1 ID=rna-XM_022779290.1_VrVC1973A-SNU_v1; Name=rna-XM_022779290.1_VrVC1973A-SNU_v1; organism=Vigna radiata; type=polypeptide; length=161bp
MSLLQKGLCCVFDVRNHNVSSLNLSSAMVCTTANFHAPNPPSKTNLQSMG
CGKARRILKPLSAALPVPPPLDLTEDNVRQALEDARQELSQIFDTSVGMT
GVVELADLDGPFVKLSLRGRFWHKRSTVVARIANYLKQRIPEILEVDIED
EKQLDDSPENF
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mRNA from alignment at chr03:6486530..6489880+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-XM_022779290.1_VrVC1973A-SNU_v1 ID=rna-XM_022779290.1_VrVC1973A-SNU_v1; Name=rna-XM_022779290.1; organism=Vigna radiata; type=mRNA; length=3351bp; location=Sequence derived from: chr03:6486530..6489880+ (Vigna radiata
AagatgtcttttttttttagcatATGAATATCATCCATATCCGATGATAT TCACCCACTTCACTGTGTTGCATTATCCTGAAGTTAGAAATCCAGACAAT TGAATTTGAGGTAGAAATTCAGGAAAAGAAAAAGCGGAGATTGAAGGAGT ATGTCCTTATTACAGAAGGGCCTGTGTTGTGTCTTTGACGTCCGTAACCA CAATGTAAGCTCTCTCAACCTCTCATCGGCAATGGTATGCACCACCGCCA ATTTCCATGCCCCAAATCCCCCATCCAAAACAAACCTTCAATCGATGGGA TGTGGCAAAGCAAGGAGGATCTTGAAACCTCTATCAGCGGCTCTTCCCGT TCCACCGCCGCTTGACCTCACAGAAGACAACGTGAGACAGGCTTTGGAGG ACGCTCGACAGGAGCTGAGTCAAATCTTTGACACCTCTGTTGGTATGACA GGTAAGGTAAGCATTATTTGACTGTTACTTGGTAGTTTCTGGTTTGTTGA TAACTGTAATGGAACAACACAACATAATCTAATTTCAGGAGTGGTTGAAC TAGCTGACTTGGATGGACCTTTTGTAAAGCTTAGCCTTAGGGGTCGCTTT TGGCACAAGCGTTCCACGGTCGTAGCCAGAATCGCCAATTATCTCAAACA GAGGATTCCTGTGAGTCTCTTATGGTTGTTTTCTAAAACGCCAAAATAAC CACTCAAGTAAACTATTACAGTGCAAAGCTAAAGAGTTACATAACTTTTG CCCCTTTAATGCATTGGTTTCAGGAGATTTTGGAGGTTGACATAGAAGAC GAGAAACAATTGGATGATAGTCCTGAGAATTTTTAAGGTACTGTGCACGG CTCGCGTCCTTTAGATTTTgctctattctttcttttgaTTCAGTTGGTCT TCGACTCGacaaagaaaatttgtttggtGCGGATGAGAAACCATTGGAAA AATGTTTCTATGGGAATATCTGTATAATTGTGCTATCTTCGTTAGATGTT ATTGTTACATACACATCAAAGCTTCTTGCACAATCCTCATTATAATCCCC TTTCTATCCTTTcctttttgtttcaaaatcaaatagTGCACATTCTGTAT GGCAGATTATGtgcataaaaatatacaaacaacaTTTGGTCTTTGGGAAC TGCCTTGTTGGTGTCATTGGTCAGGTTCACCAAACGACATTATCTCTTAT TGTGTTGAAGTCATTGAGTGAGTAGTCACCAATCAACATAAAACATTTGG GGCAAGTTTCGGTAGAATTGTCCATATATTCATCATTGGCTAAGTGCTGA AGTTTCCATTTTGTTTCGATCGAGGTATCAGTTATCAACAATAAGGTTCT TTGGTAAATTAATCAAAGAATTTTATCAAAGAGAATTTGATTTCTTACAA AACTCAATGATGTCATGAGAGATTCATTGAACATTCTTTTTGTTGTTGAC AGCTAAATTGAGGGAAAGGACAGAGAAGATCTGgtcttattttcttttcg aGCAATGATACACATACAACTTGATTTCATCTACACCTATCACACACTTG ATTTTTCTTCTACCTCTCTTCTTATCAAATCATATAACCTATAAACCTAT CATTTTTGTTCTCTCTCTAAGTGTATATTAAGTCTTAATGTACCTTTTTG GTGTCTAtgaatcatttttcttttcttaattaccAGCAACCTGTAGCACA GGAATGTTGGTTTACAAAATTGCAATGCATATTGATTCGTTTGATCTTAC TGTTTTACTGCATTTAGCGGTCATTACATCTGTGGCGTGCTGTGTTGTAC ACACTCGTTCATTTACTGATTGAGGTGCTTCTGAGTGTCCCTACCTTATC CATAACTACAAGGCTTTTGTTTTGGTGGCCTGTAATTGTTCGATTAACTT AGTTTTGGTTTCTAAGGATATGCCAATGCCTTTTTGGCTTAAGATTATCA TTTGACACGGAACTGAAGACAACAAACCCCTCTTGTAAAGAAACTTTATT CGccttattgtttttgtttcatttatacAATCAACAATACAATTTATAGA CTTACCTATCAAAATAGACAAAATGACGATAAACGACCATAAATGAGTAA CCCATTAACTAACTACCAATAATTCTCCAACCGATAATACATTAACTAGT CATATAGTCATAAGACTCCAACGAACTAATTCATTTAAGTTTATCATTTA ACACGGAACAGTTCAGTTATGCCTTTCCCTCTATGTTTGACTAAATTAGA CATGGTAAGAACTTCACTATGTCCAAATTTATGATATGAATCCAGAGTAG TGCGATCCAGAAActcatgttttgttatttactTACCAACTTTACTATGT TTCTGATGGGCAATGCAGTTGGGAATTGAATAAAACTACAATGATCTCTA GCAGCTAAACCTGGTCTTGACCTGCCACCATTTATGAATGCTCTAGTTTC TGGTTGAACGATGACCCTCTTTTTTTTGGTTTGAATTCTCGTTGTAGTCT GAGTGGAGCTTGGTGAATCCATTTAGCCAGGTTGTTAGAGTTAGTTTCTG TCGTTTCATGCGTATATCGTAGTTGGTGACCACAATTTTCCAAGAAACGT AGATTAGATTATCTGATCTGAGTGACTTAATTGAATGCCATTAGTGGGTA CTGAATTTATGCCAACCATTTACCTCATTAATTCAGCTATTTGAAATAAC TTTGACTCCACTTTTTTACGAACTATTTTATATTGGATTATTGAACTTTG AAAACATTGTTCTGAGAAAAAGGGAATTAATTTTTCAGTCATCTAATTGT TTTTACTAAGAGGCGAATATATCCAGTGAAAAGTTGAGTAGCTTAAACTT AAACTAATTTCATTGTTTAACTAACACATAGCTGGGTAACTTACTAACTA ATTGTTAGTAGTATTAGTAGTAACACCCCTCAAGGTCGAAAGTAAAGACA AAGGATGGTTTGAAAAGTAAGGTCTGAAAATGAGCAGCAGTTAATGACTT AAGTAACAAATCAATATTCTGATGGGCAGATTTGACATGAACTAATTGGA CTAATTCTCTTATGAAGTGAATGTCAATGTGGATGTGTTTGAAGTCAAAT GAATAGTTGATTGgttgtaatattaaataatgatagaTGAAATGGAAACT CAAAGTGAGAGACGTTGGAGCCACACAACTTCACTACCAACAGGCAAATG CTTTACACTCGGTGTCTATTGATGATCTTGAAACAGTAGAGATTCACCCA AGAACACACAAAAACTAGTAGTAGATTGCCTAGTGTCAGTACAACTTTAG TAGGAAGCCATATCTACTGGAAAATACCCTAAAAGCTACCACTAAAGCTG T
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Coding sequence (CDS) from alignment at chr03:6486530..6489880+

>rna-XM_022779290.1_VrVC1973A-SNU_v1 ID=rna-XM_022779290.1_VrVC1973A-SNU_v1; Name=rna-XM_022779290.1; organism=Vigna radiata; type=CDS; length=486bp; location=Sequence derived from: chr03:6486530..6489880+ (Vigna radiata
ATGTCCTTATTACAGAAGGGCCTGTGTTGTGTCTTTGACGTCCGTAACCA
CAATGTAAGCTCTCTCAACCTCTCATCGGCAATGGTATGCACCACCGCCA
ATTTCCATGCCCCAAATCCCCCATCCAAAACAAACCTTCAATCGATGGGA
TGTGGCAAAGCAAGGAGGATCTTGAAACCTCTATCAGCGGCTCTTCCCGT
TCCACCGCCGCTTGACCTCACAGAAGACAACGTGAGACAGGCTTTGGAGG
ACGCTCGACAGGAGCTGAGTCAAATCTTTGACACCTCTGTTGGTATGACA
GGAGTGGTTGAACTAGCTGACTTGGATGGACCTTTTGTAAAGCTTAGCCT
TAGGGGTCGCTTTTGGCACAAGCGTTCCACGGTCGTAGCCAGAATCGCCA
ATTATCTCAAACAGAGGATTCCTGAGATTTTGGAGGTTGACATAGAAGAC
GAGAAACAATTGGATGATAGTCCTGAGAATTTTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR034904FSCA_dom_sf