rna-XM_022779290.1
Transcript Overview
References
External references for this mRNA
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of rna-XM_022779290.1 vs. Araport11
Match: AT2G33180.1 (| hypothetical protein | Chr2:14066479-14067314 FORWARD LENGTH=166 | 201606) HSP 1 Score: 151.754 bits (382), Expect = 2.854e-47 Identity = 68/93 (73.12%), Postives = 81/93 (87.10%), Query Frame = 0 Query: 69 PPLDLTEDNVRQALEDARQELSQIFDTSVGMTGVVELADLDGPFVKLSLRGRFWHKRSTVVARIANYLKQRIPEILEVDIEDEKQLDDSPENF 161 PPLDLTEDN+ L +AR EL+Q+FD+SVG+TG VEL +LDGPFV +SLRG+FWH R+ V+AR+ NYLKQRIPEILEV+IEDEKQLDDSP NF Sbjct: 74 PPLDLTEDNIHLVLSEARIELAQLFDSSVGITGQVELVELDGPFVTISLRGKFWHTRAMVLARLGNYLKQRIPEILEVNIEDEKQLDDSPANF 166
BLAST of rna-XM_022779290.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3TN81|A0A1S3TN81_VIGRR (uncharacterized protein LOC106757135 OS=Vigna radiata var. radiata OX=3916 GN=LOC106757135 PE=4 SV=1) HSP 1 Score: 333.183 bits (853), Expect = 1.797e-115 Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0 Query: 1 MSLLQKGLCCVFDVRNHNVSSLNLSSAMVCTTANFHAPNPPSKTNLQSMGCGKARRILKPLSAALPVPPPLDLTEDNVRQALEDARQELSQIFDTSVGMTGVVELADLDGPFVKLSLRGRFWHKRSTVVARIANYLKQRIPEILEVDIEDEKQLDDSPENF 161 MSLLQKGLCCVFDVRNHNVSSLNLSSAMVCTTANFHAPNPPSKTNLQSMGCGKARRILKPLSAALPVPPPLDLTEDNVRQALEDARQELSQIFDTSVGMTGVVELADLDGPFVKLSLRGRFWHKRSTVVARIANYLKQRIPEILEVDIEDEKQLDDSPENF Sbjct: 1 MSLLQKGLCCVFDVRNHNVSSLNLSSAMVCTTANFHAPNPPSKTNLQSMGCGKARRILKPLSAALPVPPPLDLTEDNVRQALEDARQELSQIFDTSVGMTGVVELADLDGPFVKLSLRGRFWHKRSTVVARIANYLKQRIPEILEVDIEDEKQLDDSPENF 161
BLAST of rna-XM_022779290.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3RZ96|A0A0S3RZ96_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.04G351500 PE=4 SV=1) HSP 1 Score: 313.153 bits (801), Expect = 1.315e-107 Identity = 153/161 (95.03%), Postives = 153/161 (95.03%), Query Frame = 0 Query: 1 MSLLQKGLCCVFDVRNHNVSSLNLSSAMVCTTANFHAPNPPSKTNLQSMGCGKARRILKPLSAALPVPPPLDLTEDNVRQALEDARQELSQIFDTSVGMTGVVELADLDGPFVKLSLRGRFWHKRSTVVARIANYLKQRIPEILEVDIEDEKQLDDSPENF 161 MSLLQKGLCCVF VRN NVSSLNLSS MVCT NFHAPNPPSKTNLQSMG GKARRILKPLSAALPVPPPLDLTEDNVRQALEDAR EL QIFDTSVGMTGVVELADLDGPFVKLSLRGRFWHKRSTVVARIANYLKQRIPEILEVDIEDEKQLDDSPENF Sbjct: 1 MSLLQKGLCCVFHVRNRNVSSLNLSSGMVCTATNFHAPNPPSKTNLQSMGRGKARRILKPLSAALPVPPPLDLTEDNVRQALEDARLELGQIFDTSVGMTGVVELADLDGPFVKLSLRGRFWHKRSTVVARIANYLKQRIPEILEVDIEDEKQLDDSPENF 161
BLAST of rna-XM_022779290.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9U8K0|A0A0L9U8K0_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan03g247500 PE=4 SV=1) HSP 1 Score: 313.153 bits (801), Expect = 1.315e-107 Identity = 153/161 (95.03%), Postives = 153/161 (95.03%), Query Frame = 0 Query: 1 MSLLQKGLCCVFDVRNHNVSSLNLSSAMVCTTANFHAPNPPSKTNLQSMGCGKARRILKPLSAALPVPPPLDLTEDNVRQALEDARQELSQIFDTSVGMTGVVELADLDGPFVKLSLRGRFWHKRSTVVARIANYLKQRIPEILEVDIEDEKQLDDSPENF 161 MSLLQKGLCCVF VRN NVSSLNLSS MVCT NFHAPNPPSKTNLQSMG GKARRILKPLSAALPVPPPLDLTEDNVRQALEDAR EL QIFDTSVGMTGVVELADLDGPFVKLSLRGRFWHKRSTVVARIANYLKQRIPEILEVDIEDEKQLDDSPENF Sbjct: 1 MSLLQKGLCCVFHVRNRNVSSLNLSSGMVCTATNFHAPNPPSKTNLQSMGRGKARRILKPLSAALPVPPPLDLTEDNVRQALEDARLELGQIFDTSVGMTGVVELADLDGPFVKLSLRGRFWHKRSTVVARIANYLKQRIPEILEVDIEDEKQLDDSPENF 161
BLAST of rna-XM_022779290.1 vs. UniProtKB/TrEMBL
Match: tr|V7D0B2|V7D0B2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_001G194300g PE=4 SV=1) HSP 1 Score: 296.59 bits (758), Expect = 4.690e-101 Identity = 139/161 (86.34%), Postives = 151/161 (93.79%), Query Frame = 0 Query: 1 MSLLQKGLCCVFDVRNHNVSSLNLSSAMVCTTANFHAPNPPSKTNLQSMGCGKARRILKPLSAALPVPPPLDLTEDNVRQALEDARQELSQIFDTSVGMTGVVELADLDGPFVKLSLRGRFWHKRSTVVARIANYLKQRIPEILEVDIEDEKQLDDSPENF 161 MS++QKGLCCVF +RNHNVS+LNLSS +VCTT N+HAP PPS TNLQSM GKARR+LKPLSAALPVPPP+DLTE+NV+Q LEDARQEL QIFDTSVGMTGVVELADLDGPFVKLSLRGRFWH+RS V+ARIANYLKQRIPEILEVDIEDEKQLDDSPENF Sbjct: 1 MSVIQKGLCCVFHIRNHNVSTLNLSSVVVCTTTNYHAPKPPSTTNLQSMTRGKARRMLKPLSAALPVPPPIDLTENNVKQVLEDARQELGQIFDTSVGMTGVVELADLDGPFVKLSLRGRFWHERSMVLARIANYLKQRIPEILEVDIEDEKQLDDSPENF 161
BLAST of rna-XM_022779290.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6MBB7|A0A4D6MBB7_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG6g2819 PE=4 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 8.994e-98 Identity = 152/161 (94.41%), Postives = 154/161 (95.65%), Query Frame = 0 Query: 1 MSLLQKGLCCVFDVRNHNVSSLNLSSAMVCTTANFHAPNPPSKTNLQSMGCGKARRILKPLSAALPVPPPLDLTEDNVRQALEDARQELSQIFDTSVGMTGVVELADLDGPFVKLSLRGRFWHKRSTVVARIANYLKQRIPEILEVDIEDEKQLDDSPENF 161 MSLLQKGLCCVF +RNHNVSSLNLSSA+VCT NFHAPNPPSKTNLQSM GKARRILKPL AALPVPPPLDLTEDNVRQALEDARQEL QIFDTSVGMTGVVELADLDGPFVKLSLRGRFWHKRSTVVARIANYLKQRIPEILEVDIEDEKQLDDSPENF Sbjct: 1 MSLLQKGLCCVFHIRNHNVSSLNLSSAVVCTATNFHAPNPPSKTNLQSMTRGKARRILKPLPAALPVPPPLDLTEDNVRQALEDARQELGQIFDTSVGMTGVVELADLDGPFVKLSLRGRFWHKRSTVVARIANYLKQRIPEILEVDIEDEKQLDDSPENF 161
BLAST of rna-XM_022779290.1 vs. UniProtKB/TrEMBL
Match: tr|A0A371FSQ0|A0A371FSQ0_MUCPR (Uncharacterized protein OS=Mucuna pruriens OX=157652 GN=CR513_38162 PE=4 SV=1) HSP 1 Score: 256.914 bits (655), Expect = 2.156e-85 Identity = 128/165 (77.58%), Postives = 140/165 (84.85%), Query Frame = 0 Query: 1 MSLLQKGLCCVFDVRNHNVSSLNLSSAMVCTTANFHAPNPPSKTN----LQSMGCGKARRILKPLSAALPVPPPLDLTEDNVRQALEDARQELSQIFDTSVGMTGVVELADLDGPFVKLSLRGRFWHKRSTVVARIANYLKQRIPEILEVDIEDEKQLDDSPENF 161 MSLLQ GL F +RNHNVSSLNLS+ V N++AP PPSKT+ LQS GK RR LKPLSAALPVPPPLDLTE+NVRQ L+DARQEL QIFDTSVGMTGVVELADLDGPFVK+SL+GRFWH+RS V+AR+ NYLKQRIPEILEVDIEDEKQLDDSPENF Sbjct: 1 MSLLQNGLYGGFHIRNHNVSSLNLSAGAVT---NYNAPKPPSKTSPNSPLQSTTRGKRRRTLKPLSAALPVPPPLDLTENNVRQVLDDARQELGQIFDTSVGMTGVVELADLDGPFVKISLKGRFWHQRSMVLARVGNYLKQRIPEILEVDIEDEKQLDDSPENF 162
BLAST of rna-XM_022779290.1 vs. UniProtKB/TrEMBL
Match: tr|C6SWB3|C6SWB3_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 2.457e-84 Identity = 130/167 (77.84%), Postives = 142/167 (85.03%), Query Frame = 0 Query: 1 MSLLQKGLCCVFDVRNHN-VSSLNLSSAMVCTTANFHAPNPPSKTN----LQSMGCGKARR-ILKPLSAALPVPPPLDLTEDNVRQALEDARQELSQIFDTSVGMTGVVELADLDGPFVKLSLRGRFWHKRSTVVARIANYLKQRIPEILEVDIEDEKQLDDSPENF 161 MSLLQKGLCCVFD+RNHN VSSLNLS N+HA P SKT LQS+ GK RR +LKP+SAALP PPPLDLTE+NV+Q L+DAR+EL QIFDTSVGMTGVVELADLDGPFVK+SL GRFWHKRSTV+AR+ANYLKQRIPEILEVDIEDEKQLDDSPENF Sbjct: 1 MSLLQKGLCCVFDIRNHNNVSSLNLS------ITNYHAAKPLSKTTTYSPLQSLTRGKPRRRMLKPISAALPAPPPLDLTENNVKQVLDDARKELGQIFDTSVGMTGVVELADLDGPFVKISLSGRFWHKRSTVLARVANYLKQRIPEILEVDIEDEKQLDDSPENF 161
BLAST of rna-XM_022779290.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445LEH7|A0A445LEH7_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_007695 PE=4 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 2.457e-84 Identity = 130/167 (77.84%), Postives = 142/167 (85.03%), Query Frame = 0 Query: 1 MSLLQKGLCCVFDVRNHN-VSSLNLSSAMVCTTANFHAPNPPSKTN----LQSMGCGKARR-ILKPLSAALPVPPPLDLTEDNVRQALEDARQELSQIFDTSVGMTGVVELADLDGPFVKLSLRGRFWHKRSTVVARIANYLKQRIPEILEVDIEDEKQLDDSPENF 161 MSLLQKGLCCVFD+RNHN VSSLNLS N+HA P SKT LQS+ GK RR +LKP+SAALP PPPLDLTE+NV+Q L+DAR+EL QIFDTSVGMTGVVELADLDGPFVK+SL GRFWHKRSTV+AR+ANYLKQRIPEILEVDIEDEKQLDDSPENF Sbjct: 1 MSLLQKGLCCVFDIRNHNNVSSLNLS------ITNYHAAKPLSKTTTYSPLQSLTRGKPRRRMLKPISAALPAPPPLDLTENNVKQVLDDARKELGQIFDTSVGMTGVVELADLDGPFVKISLSGRFWHKRSTVLARVANYLKQRIPEILEVDIEDEKQLDDSPENF 161
BLAST of rna-XM_022779290.1 vs. UniProtKB/TrEMBL
Match: tr|I1JQ74|I1JQ74_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_03G200700 PE=4 SV=1) HSP 1 Score: 253.832 bits (647), Expect = 4.297e-84 Identity = 130/167 (77.84%), Postives = 142/167 (85.03%), Query Frame = 0 Query: 1 MSLLQKGLCCVFDVRNHN-VSSLNLSSAMVCTTANFHAPNPPSKTN----LQSMGCGKARR-ILKPLSAALPVPPPLDLTEDNVRQALEDARQELSQIFDTSVGMTGVVELADLDGPFVKLSLRGRFWHKRSTVVARIANYLKQRIPEILEVDIEDEKQLDDSPENF 161 MSLLQKGLCCVFD+RNHN VSSLNLS N+HA P SKT LQS+ GK RR +LKP+SAALP PPPLDLTE+NV+Q L+DAR+EL QIFDTSVGMTGVVELADLDGPFVK+SL GRFWHKRSTV+AR+ANYLKQRIPEILEVDIEDEKQLDDSPENF Sbjct: 1 MSLLQKGLCCVFDIRNHNNVSSLNLS------ITNYHAAKPLSKTATYSPLQSLTRGKPRRRMLKPISAALPAPPPLDLTENNVKQVLDDARKELGQIFDTSVGMTGVVELADLDGPFVKISLSGRFWHKRSTVLARVANYLKQRIPEILEVDIEDEKQLDDSPENF 161
BLAST of rna-XM_022779290.1 vs. UniProtKB/TrEMBL
Match: tr|C6T1T6|C6T1T6_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 1.529e-81 Identity = 127/164 (77.44%), Postives = 144/164 (87.80%), Query Frame = 0 Query: 1 MSLLQKGLCCVFDVRNHNVSSLNLSSAMVCTTA--NFHAPNPPSKTNLQSMGCGKARRIL-KPLSAALPVPPPLDLTEDNVRQALEDARQELSQIFDTSVGMTGVVELADLDGPFVKLSLRGRFWHKRSTVVARIANYLKQRIPEILEVDIEDEKQLDDSPENF 161 MSLLQKGLCCVFD+RN NV SL L S C+T NFHAPN S + LQS+ GK+RR++ KP+SAALP PPPLDLTE+NV+Q LEDAR+EL QIFD+SVG+TGVVELADLDGPFVK+SL+GRFWHKRSTV+AR+ANYLKQRIPEILEVDIEDEKQLDDSPENF Sbjct: 1 MSLLQKGLCCVFDIRN-NVRSLRLPS---CSTRIRNFHAPNN-SNSPLQSLTRGKSRRMISKPISAALPAPPPLDLTENNVKQVLEDARKELGQIFDSSVGITGVVELADLDGPFVKISLKGRFWHKRSTVLARVANYLKQRIPEILEVDIEDEKQLDDSPENF 159 The following BLAST results are available for this feature:
BLAST of rna-XM_022779290.1 vs.
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot) Total hits: 0
BLAST of rna-XM_022779290.1 vs. Araport11
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11) Total hits: 1
BLAST of rna-XM_022779290.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0
Date Performed: 2023-06-20
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-XM_022779290.1_VrVC1973A-SNU_v1 ID=rna-XM_022779290.1_VrVC1973A-SNU_v1; Name=rna-XM_022779290.1; organism=Vigna radiata; type=mRNA; length=486bpback to top protein sequence of rna-XM_022779290.1_VrVC1973A-SNU_v1 >rna-XM_022779290.1_VrVC1973A-SNU_v1 ID=rna-XM_022779290.1_VrVC1973A-SNU_v1; Name=rna-XM_022779290.1_VrVC1973A-SNU_v1; organism=Vigna radiata; type=polypeptide; length=161bpback to top mRNA from alignment at chr03:6486530..6489880+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>rna-XM_022779290.1_VrVC1973A-SNU_v1 ID=rna-XM_022779290.1_VrVC1973A-SNU_v1; Name=rna-XM_022779290.1; organism=Vigna radiata; type=mRNA; length=3351bp; location=Sequence derived from: chr03:6486530..6489880+ (Vigna radiataback to top Coding sequence (CDS) from alignment at chr03:6486530..6489880+ >rna-XM_022779290.1_VrVC1973A-SNU_v1 ID=rna-XM_022779290.1_VrVC1973A-SNU_v1; Name=rna-XM_022779290.1; organism=Vigna radiata; type=CDS; length=486bp; location=Sequence derived from: chr03:6486530..6489880+ (Vigna radiataback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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