rna-XM_022779740.1

Transcript Overview
Namerna-XM_022779740.1
Unique Namerna-XM_022779740.1_VrVC1973A-SNU_v1
TypemRNA
OrganismVigna radiata (Mung bean, green gram)
Sequence length423
Productuncharacterized LOC106758629, transcript variant X3
References
External references for this mRNA
DatabaseAccession
GeneID106758629
GenbankXM_022779740.1
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr04chromosomechr04:7195140..7198387 -Vigna radiata cv. VC1973A genome v6.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
asvrvL116Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvrvL556Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anvrvL1016Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL1089Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
caivrvL061Cicer arietinum ICC 4958 genome v2Cicer arietinum
caivrvL264Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavrvL039Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
crvrvL042Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ccvrvL0877Cajanus cajan Asha genome v1.0Cajanus cajan
ccvrvL0942Cajanus cajan Asha genome v1.0Cajanus cajan
pvvrvL027Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
psvrvL396Pisum sativum Cameor genome v1aPisum sativum
pvvrvL156Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvrvL457Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
tifvrvL167Vicia faba cv. Tiffany genome v1.0Vicia faba
vrvvrvL103Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvvrvL123Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvrvL172Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvssR355Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvssR382Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvssR409Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvuaR254Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvvuR275Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vrvvuR285Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vrvzwsR328Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvzwsR336Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvvuaR282Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvvuR305Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canvrvL037Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvrvL192Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvrvL067Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvrvL356Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvrvL515Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvrvL041Cicer arietinum
carvrvL498Cicer arietinum
ccavrvL093Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavrvL228Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavrvL408Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vrvvumR330Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvumR346Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvumR347Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvvaR323Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvvaR335Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvstR313Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vrvvstR329Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vrvvstR330Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvrvL481Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvrvL513Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvrvL023Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvrvL152Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvrvL414Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vrvvunR271Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vrvvunR288Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LOC106758629gene-LOC106758629_VrVC1973A-SNU_v1Vigna radiatagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_022779740.1-6exon-XM_022779740.1-6_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_022779740.1-5exon-XM_022779740.1-5_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_022779740.1-4exon-XM_022779740.1-4_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_022779740.1-3exon-XM_022779740.1-3_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_022779740.1-2exon-XM_022779740.1-2_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_022779740.1-1exon-XM_022779740.1-1_VrVC1973A-SNU_v1Vigna radiataexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-XP_022635461.1cds-XP_022635461.1_VrVC1973A-SNU_v1_6Vigna radiataCDS
cds-XP_022635461.1cds-XP_022635461.1_VrVC1973A-SNU_v1_5Vigna radiataCDS
cds-XP_022635461.1cds-XP_022635461.1_VrVC1973A-SNU_v1_4Vigna radiataCDS
cds-XP_022635461.1cds-XP_022635461.1_VrVC1973A-SNU_v1_3Vigna radiataCDS
cds-XP_022635461.1cds-XP_022635461.1_VrVC1973A-SNU_v1_2Vigna radiataCDS
cds-XP_022635461.1cds-XP_022635461.1_VrVC1973A-SNU_v1Vigna radiataCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-XM_022779740.1_VrVC1973A-SNU_v1rna-XM_022779740.1_VrVC1973A-SNU_v1Vigna radiatapolypeptide
rna-XM_022779740.1_VrVC1973A-SNU_v1rna-XM_022779740.1_VrVC1973A-SNU_v1-proteinVigna radiatapolypeptide


Homology
BLAST of rna-XM_022779740.1 vs. Araport11
Match: AT5G18250.1 (| transmembrane protein | Chr5:6033797-6035216 FORWARD LENGTH=133 | 201606)

HSP 1 Score: 176.407 bits (446), Expect = 8.940e-58
Identity = 84/120 (70.00%), Postives = 92/120 (76.67%), Query Frame = 0
Query:   19 NIRCHHCAGPLSNRMETSLWNVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSKNENIQKS 138
             IRCHHCAGPL+  +ETS W V P IRDSFSMIGSAVGGTASAF GFN  MPIV++ IKGPMWLHF +GAPPVIV SSACAGL GG +PA AQL SSSY AA  S   P   K+  +QKS
Sbjct:    9 EIRCHHCAGPLTRNLETSKWTVDPFIRDSFSMIGSAVGGTASAFIGFNHAMPIVRKWIKGPMWLHFLVGAPPVIVLSSACAGLAGGTVPALAQLASSSYRAAVHSSQPPQAQKDNKMQKS 128          
BLAST of rna-XM_022779740.1 vs. Araport11
Match: AT3G04040.1 (| transmembrane protein | Chr3:1047754-1049026 FORWARD LENGTH=138 | 201606)

HSP 1 Score: 172.94 bits (437), Expect = 2.084e-56
Identity = 84/127 (66.14%), Postives = 103/127 (81.10%), Query Frame = 0
Query:   10 TSKLSNSTQNI--RCHHCAGPLSNRMETSLWNVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSKNEN 134
            ++ +++S + I  RCHHCAGPL+  +ET+ W V+P IRDSFSMIGSAVGGTASAF GF+ VMPIV++ IKGPMWLHF +GAPPVIV SSACAGL GGA+PA AQL SSSYHAA  S + PP  +++N
Sbjct:    2 SATMADSGKEIGSRCHHCAGPLTKNLETNEWTVAPFIRDSFSMIGSAVGGTASAFIGFHHVMPIVRKWIKGPMWLHFLVGAPPVIVVSSACAGLAGGAVPALAQLASSSYHAAVHS-SQPPQGQDKN 127          
BLAST of rna-XM_022779740.1 vs. Araport11
Match: AT2G41945.1 (| transmembrane protein | Chr2:17511071-17512898 REVERSE LENGTH=158 | 201606)

HSP 1 Score: 69.3218 bits (168), Expect = 1.749e-15
Identity = 33/92 (35.87%), Postives = 50/92 (54.35%), Query Frame = 0
Query:   21 RCHHCAGPLSNRMETSLWNVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQL 112
            RC  C   L+   E   W ++P++ D+ ++ GS +GG  SA + FN  +P +Q R  G   L F +G P ++V+S   A   G A+P  AQL
Sbjct:   30 RCPRCLSLLNPNSEKGEWTITPVLHDAAAVAGSGIGGLLSAVHAFNTGIPYLQNRFSGSKRLSFLVGVPLLLVYSGVGAAFGGYALPKFAQL 121          
BLAST of rna-XM_022779740.1 vs. Araport11
Match: AT2G41945.2 (| transmembrane protein | Chr2:17509933-17512898 REVERSE LENGTH=166 | 201606)

HSP 1 Score: 68.9366 bits (167), Expect = 2.365e-15
Identity = 33/93 (35.48%), Postives = 50/93 (53.76%), Query Frame = 0
Query:   21 RCHHCAGPLSNRMETSLWNVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLV 113
            RC  C   L+   E   W ++P++ D+ ++ GS +GG  SA + FN  +P +Q R  G   L F +G P ++V+S   A   G A+P  AQL 
Sbjct:   30 RCPRCLSLLNPNSEKGEWTITPVLHDAAAVAGSGIGGLLSAVHAFNTGIPYLQNRFSGSKRLSFLVGVPLLLVYSGVGAAFGGYALPKFAQLT 122          
BLAST of rna-XM_022779740.1 vs. Araport11
Match: AT2G41945.3 (| transmembrane protein | Chr2:17509933-17512898 REVERSE LENGTH=204 | 201606)

HSP 1 Score: 59.3066 bits (142), Expect = 2.228e-11
Identity = 30/89 (33.71%), Postives = 48/89 (53.93%), Query Frame = 0
Query:   21 RCHHCAGPLSNRMETSLWNVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAA 109
            RC  C   L+   E   W ++P++ D+ ++ GS +GG  SA + FN  +P +Q R  G   L F +G P ++V+S   A   G ++ AA
Sbjct:   30 RCPRCLSLLNPNSEKGEWTITPVLHDAAAVAGSGIGGLLSAVHAFNTGIPYLQNRFSGSKRLSFLVGVPLLLVYSGVGAAF-GESLQAA 117          
BLAST of rna-XM_022779740.1 vs. UniProtKB/TrEMBL
Match: tr|A0A3Q0EWD2|A0A3Q0EWD2_VIGRR (uncharacterized protein LOC106758629 isoform X2 OS=Vigna radiata var. radiata OX=3916 GN=LOC106758629 PE=4 SV=1)

HSP 1 Score: 290.812 bits (743), Expect = 1.851e-99
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0
Query:    1 MQHCDNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLWNVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSKNENIQKSIK 140
            MQHCDNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLWNVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSKNENIQKSIK
Sbjct:    1 MQHCDNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLWNVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSKNENIQKSIK 140          
BLAST of rna-XM_022779740.1 vs. UniProtKB/TrEMBL
Match: tr|A0A3Q0EUR3|A0A3Q0EUR3_VIGRR (uncharacterized protein LOC106758629 isoform X1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106758629 PE=4 SV=1)

HSP 1 Score: 285.419 bits (729), Expect = 3.063e-97
Identity = 140/144 (97.22%), Postives = 140/144 (97.22%), Query Frame = 0
Query:    1 MQHCDNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLWNVSPLIRDSFSMIGSAVGGTASAFYGFNLV----MPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSKNENIQKSIK 140
            MQHCDNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLWNVSPLIRDSFSMIGSAVGGTASAFYGFNLV    MPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSKNENIQKSIK
Sbjct:    1 MQHCDNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLWNVSPLIRDSFSMIGSAVGGTASAFYGFNLVSNAVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSKNENIQKSIK 144          
BLAST of rna-XM_022779740.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3SGZ7|A0A0S3SGZ7_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.07G073600 PE=4 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 6.572e-97
Identity = 137/140 (97.86%), Postives = 138/140 (98.57%), Query Frame = 0
Query:    1 MQHCDNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLWNVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSKNENIQKSIK 140
            MQH DNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLW VSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPS+NENIQKSIK
Sbjct:    1 MQHSDNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSENENIQKSIK 140          
BLAST of rna-XM_022779740.1 vs. UniProtKB/TrEMBL
Match: tr|V7BYF3|V7BYF3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_005G124000g PE=4 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 4.682e-84
Identity = 123/140 (87.86%), Postives = 125/140 (89.29%), Query Frame = 0
Query:    1 MQHCDNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLWNVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSKNENIQKSIK 140
            MQH DN ME SKLSNS QNIRCHHCAGPLSNRMETS W VSPLIRDSFSMIGSAVGGT SAFYGFNLVMPIVQRRIKGPMWLHF IGAPPVIVFSSACAGL GGA+PAAAQLVSSSYHAAY     PPPSK+E IQKSIK
Sbjct:    1 MQHSDNEMEASKLSNSIQNIRCHHCAGPLSNRMETSHWTVSPLIRDSFSMIGSAVGGTTSAFYGFNLVMPIVQRRIKGPMWLHFLIGAPPVIVFSSACAGLAGGAVPAAAQLVSSSYHAAY-----PPPSKDEYIQKSIK 135          
BLAST of rna-XM_022779740.1 vs. UniProtKB/TrEMBL
Match: tr|C6TB57|C6TB57_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 3.117e-78
Identity = 114/136 (83.82%), Postives = 121/136 (88.97%), Query Frame = 0
Query:    5 DNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLWNVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSKNENIQKSIK 140
            ++ ME SKLS+S QN+RCHHCAGPLS  METS W VSPLIRDSFSMIGSAVGG ASAFYGFNLVMPIVQRRIKGPMWLHF IGAPPVIVFSSACAGL GGA+PAAAQLVSS YHAAY  PT PPPSK+ENIQ+S K
Sbjct:    3 NSAMEASKLSSSDQNVRCHHCAGPLSKDMETSHWTVSPLIRDSFSMIGSAVGGVASAFYGFNLVMPIVQRRIKGPMWLHFLIGAPPVIVFSSACAGLAGGAVPAAAQLVSSFYHAAYFFPTSPPPSKDENIQRSRK 138          
BLAST of rna-XM_022779740.1 vs. UniProtKB/TrEMBL
Match: tr|A0A151RMW4|A0A151RMW4_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_034640 PE=4 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 5.909e-73
Identity = 106/122 (86.89%), Postives = 115/122 (94.26%), Query Frame = 0
Query:   19 NIRCHHCAGPLSNRMETSLWNVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSKNENIQKSIK 140
            +IRCHHCAGPLSN+MET+ W VSPLIRDSFSMIGSAVGGTASAFYGFNLVMP+VQRRIKGPMWLHF IGAPPVIVFSSACAGL GGA+PAAAQLVSSSY+AAYS+ T+PPPSK+ NIQKS K
Sbjct:   14 DIRCHHCAGPLSNQMETTHWTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPVVQRRIKGPMWLHFLIGAPPVIVFSSACAGLAGGAVPAAAQLVSSSYNAAYSTSTLPPPSKDGNIQKSRK 135          
BLAST of rna-XM_022779740.1 vs. UniProtKB/TrEMBL
Match: tr|A0A5N6RG49|A0A5N6RG49_9ROSI (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_016430 PE=4 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 7.053e-67
Identity = 97/125 (77.60%), Postives = 108/125 (86.40%), Query Frame = 0
Query:   14 SNSTQNIRCHHCAGPLSNRMETSLWNVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSKNENIQKS 138
            S  + N+RCHHCAGPLS  METS W V PLIRDSFSMIGSAVGGT SAFYGFN VMPIV+RR+KGPMWLHF IGAPPVIVFSSACAGL GGA+PA AQL SSSYHAA +SP++PPPS++E + KS
Sbjct:    4 SKPSINMRCHHCAGPLSKEMETSRWTVPPLIRDSFSMIGSAVGGTTSAFYGFNHVMPIVRRRVKGPMWLHFLIGAPPVIVFSSACAGLAGGAVPALAQLASSSYHAAITSPSLPPPSQDEKMHKS 128          
BLAST of rna-XM_022779740.1 vs. UniProtKB/TrEMBL
Match: tr|I1M4D1|I1M4D1_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100787081 PE=4 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 7.205e-67
Identity = 117/136 (86.03%), Postives = 124/136 (91.18%), Query Frame = 0
Query:    5 DNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLWNVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSKNENIQKSIK 140
            ++ ME SKLS+S QN+RCHHCAGPLS  METS W VSPLIRDSFSMIGSAVGG ASAFYGFNLVMPIVQRRIKGPMWLHF IGAPPVIVFSSACAGL GGA+PAAAQLVSSSYHAAYSSPT PPPSK+ENIQ+S K
Sbjct:    3 NSAMEASKLSSSDQNVRCHHCAGPLSKDMETSHWTVSPLIRDSFSMIGSAVGGVASAFYGFNLVMPIVQRRIKGPMWLHFLIGAPPVIVFSSACAGLAGGAVPAAAQLVSSSYHAAYSSPTSPPPSKDENIQRSRK 138          
BLAST of rna-XM_022779740.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2RM07|A0A0B2RM07_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_032355 PE=4 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 7.205e-67
Identity = 117/136 (86.03%), Postives = 124/136 (91.18%), Query Frame = 0
Query:    5 DNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLWNVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSKNENIQKSIK 140
            ++ ME SKLS+S QN+RCHHCAGPLS  METS W VSPLIRDSFSMIGSAVGG ASAFYGFNLVMPIVQRRIKGPMWLHF IGAPPVIVFSSACAGL GGA+PAAAQLVSSSYHAAYSSPT PPPSK+ENIQ+S K
Sbjct:    3 NSAMEASKLSSSDQNVRCHHCAGPLSKDMETSHWTVSPLIRDSFSMIGSAVGGVASAFYGFNLVMPIVQRRIKGPMWLHFLIGAPPVIVFSSACAGLAGGAVPAAAQLVSSSYHAAYSSPTSPPPSKDENIQRSRK 138          
BLAST of rna-XM_022779740.1 vs. UniProtKB/TrEMBL
Match: tr|C6SWA2|C6SWA2_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 3.455e-66
Identity = 117/140 (83.57%), Postives = 122/140 (87.14%), Query Frame = 0
Query:    1 MQHCDNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLWNVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSKNENIQKSIK 140
            MQH  + ME SK SNS QN+RCHHCAGPLS  METS W VSPLIRDSFSMIGSAVGG AS FYGFNLVMPIVQRRIKGPMWLHF IGAPPVIV SSACAGL GGA+PAAAQLVSSSYHAAYSSP  PPPSK+ENIQ+S K
Sbjct:    1 MQH--SAMEASKFSNSDQNVRCHHCAGPLSKDMETSHWTVSPLIRDSFSMIGSAVGGVASTFYGFNLVMPIVQRRIKGPMWLHFLIGAPPVIVLSSACAGLAGGAVPAAAQLVSSSYHAAYSSPISPPPSKDENIQRSRK 138          
The following BLAST results are available for this feature:
BLAST of rna-XM_022779740.1 vs.
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of rna-XM_022779740.1 vs. Araport11
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11)
Total hits: 5
Match NameE-valueIdentityDescription
AT5G18250.18.940e-5870.00| transmembrane protein | Chr5:6033797-6035216 FOR... [more]
AT3G04040.12.084e-5666.14| transmembrane protein | Chr3:1047754-1049026 FOR... [more]
AT2G41945.11.749e-1535.87| transmembrane protein | Chr2:17511071-17512898 R... [more]
AT2G41945.22.365e-1535.48| transmembrane protein | Chr2:17509933-17512898 R... [more]
AT2G41945.32.228e-1133.71| transmembrane protein | Chr2:17509933-17512898 R... [more]
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BLAST of rna-XM_022779740.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A3Q0EWD2|A0A3Q0EWD2_VIGRR1.851e-99100.00uncharacterized protein LOC106758629 isoform X2 OS... [more]
tr|A0A3Q0EUR3|A0A3Q0EUR3_VIGRR3.063e-9797.22uncharacterized protein LOC106758629 isoform X1 OS... [more]
tr|A0A0S3SGZ7|A0A0S3SGZ7_PHAAN6.572e-9797.86Uncharacterized protein OS=Vigna angularis var. an... [more]
tr|V7BYF3|V7BYF3_PHAVU4.682e-8487.86Uncharacterized protein OS=Phaseolus vulgaris OX=3... [more]
tr|C6TB57|C6TB57_SOYBN3.117e-7883.82Uncharacterized protein OS=Glycine max OX=3847 PE=... [more]
tr|A0A151RMW4|A0A151RMW4_CAJCA5.909e-7386.89Uncharacterized protein OS=Cajanus cajan OX=3821 G... [more]
tr|A0A5N6RG49|A0A5N6RG49_9ROSI7.053e-6777.60Uncharacterized protein OS=Carpinus fangiana OX=17... [more]
tr|I1M4D1|I1M4D1_SOYBN7.205e-6786.03Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|A0A0B2RM07|A0A0B2RM07_GLYSO7.205e-6786.03Uncharacterized protein OS=Glycine soja OX=3848 GN... [more]
tr|C6SWA2|C6SWA2_SOYBN3.455e-6683.57Uncharacterized protein OS=Glycine max OX=3847 PE=... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0
Date Performed: 2023-06-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34459OS01G0264500 PROTEINcoord: 3..138

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-XM_022779740.1_VrVC1973A-SNU_v1 ID=rna-XM_022779740.1_VrVC1973A-SNU_v1; Name=rna-XM_022779740.1; organism=Vigna radiata; type=mRNA; length=423bp
ATGCAGCACTGTGATAATAACATGGAAACCTCCAAACTCAGTAACAGTAC
TCAAAATATTCGATGCCATCACTGCGCAGGGCCCCTTTCAAACCGCATGG
AAACTAGTCTCTGGAACGTTTCGCCTCTCATCAGGGATAGCTTCTCTATG
ATTGGTTCTGCCGTTGGCGGCACGGCGAGTGCATTTTATGGATTCAATCT
TGTTATGCCAATTGTCCAGAGAAGAATAAAAGGACCCATGTGGTTGCATT
TTTTCATTGGTGCACCCCCTGTGATAGTATTCTCTTCAGCATGCGCGGGA
CTGACAGGTGGTGCTATTCCTGCTGCGGCACAACTTGTTTCCTCCTCTTA
TCATGCAGCATACTCATCTCCTACCGTACCTCCGCCATCAAAGAATGAAA
ATATTCAAAAGTCAATAAAATGA
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protein sequence of rna-XM_022779740.1_VrVC1973A-SNU_v1

>rna-XM_022779740.1_VrVC1973A-SNU_v1 ID=rna-XM_022779740.1_VrVC1973A-SNU_v1; Name=rna-XM_022779740.1_VrVC1973A-SNU_v1; organism=Vigna radiata; type=polypeptide; length=140bp
MQHCDNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLWNVSPLIRDSFSM
IGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAG
LTGGAIPAAAQLVSSSYHAAYSSPTVPPPSKNENIQKSIK
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mRNA from alignment at chr04:7195140..7198387-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-XM_022779740.1_VrVC1973A-SNU_v1 ID=rna-XM_022779740.1_VrVC1973A-SNU_v1; Name=rna-XM_022779740.1; organism=Vigna radiata; type=mRNA; length=3248bp; location=Sequence derived from: chr04:7195140..7198387- (Vigna radiata
AGCTCTGTTTACCTTTTTCGTTTCCTATCTGCATCGAATTTTTGCATTTG ATTTGTATAGTTTGTTTCTTTGCACAACCAAGACCACGTGTGCGTTCCTG GACTAGTAGTAGTACGAATCGGAGTGAGAGGGTTCTTCTGTTCTGGTCAG GTTACGCTGTATGCAGCACTGTGATAATAACATGGAAACCTCCAAACTCA GTAACAGTACTCAAAATATTCGATGCCATCACTGCGCAGGGCCCCTTTCA AACCGCATGGTATATTTCTTCCCAATAATTCTTATTCTTTTATCTCTTTC TCTCTTACCAATTTCATTCCTTTGATTCAGGAAACTAGTCTCTGGAACGT TTCGCCTCTCATCAGGGATAGCTTCTCTATGGTGAATTATTCTCACCCAT TTCGTTTTTTTCTTCGATATCTATGTGGGTGTGCGAAATTTCTGATCTTT GTTTTTGGGGTTGAACATTTTCAGATTGGTTCTGCCGTTGGCGGCACGGC GAGTGCATTTTATGGATTCAATCTTGGTATACACTCTTGCTCCTCGCTTT TTGGTTATTTTTTAAAAAAGCTTGCTAAGATTCTCTGGAATTAAAGGGGG GTAATGCATGGTGGTCAGTTGGAGACTGTTATTGCGAAATAGGAACACTA TGTATGTATAGAATTGCTTTGTGCATCATGTCTGTATTGCTTCTAAGATG TGTTGTACAGAAACTTGAGTTATGTAAAGATTATGGGAACGATTAAGTGT CTGTTTGTATTGAAGTTAGGTTTAACATAACTGAAATTTAACACCACACT TCCTTGTATTTTTTCACATTGGAAAGTGGTATGTTAAATATCCATTTAAC TGTTGTTGAATGTGTTTCCATACACAGCTGAAGTTTGAGTGGTTTGCAAA CTTTATTTGTGGTAACTGTTTACCTTCCAAACTGAAGAATTTTAATTTTT CATAGGTTTAATTAATCATTTGTTCCTACATAACTTTTTGTTTTTGTTCC TATATCTAAAAGCTCTATATGTTAGTCTTATACAAGCATTTGTTTTTGTT TTAACCCTTGTTAGCTTTCTAACAGTATAAAACTGTCTCAAAATGTGGTA TATAGACTAAAATTTAAGAGAAGACTAAAATTTTAGATATAGGGACCAAA AAGAAAACTTGGCACAAATGTAAGGATCAAATGATCAATGAAACATTTTT AATATTTAGAAACTAAACTATTTTTTTTTTTAGCATGAAACTCTATACGT ATATATTTTTGCTTATTTTCTTAGATGATTTTAACATTACACTGAATCTT TTGTCCATGAAGGCTGCTTGTTTTTATGTATTTAACATATTCAGATTTCC GAAGTAATTTTTTAGTGTCCAATGCAGTTATGCCAATTGTCCAGAGAAGA ATAAAAGGACCCATGTGGTTGCATTTTTTCATTGGTGTAAGTTCATTATT GTTTTTTTTTATTATTATTTCTGTTGCTTTTAGTTTTTGTTTGTTGTTTT TTTTGCTAATTTTTTCCTTTTCATAACACTAGTTCATGGTTTTTCCTCGT ATTCAATGCTTTAGGAGATGTAAATCTTTGACTAGTTAACTGAGTATAAC TTCAGCTCGTCATATTATGTTCCTTAAAATAGTTATGAACTTTGATATTT CCTTTATTGTTTAATAAGAAATCAGGGAAAGATTCTTAACCAAGAGATTC TTTCTTGTTAACCTTCTAATATACTGACGCTGTACTGTAGTTGGCAAAGT TATATAAATTCTTAAATGTACAAAGTTAAACCATTTGTCCCCTAACTAAT TCTCGCTAGCTATTGAAATTATTCTATTTCTGTGACATCATGAGACAGTT AACTGATACTATAACCCTGTAACTTTCATACAGTGGTAAAGGTACAGCCC TCGTGATCTAGACTCCTTTGCTTTCTCTGATGATCTGAACACATTTTGTC ATCTTAAATAGAAGTGAGATGACTTATATCATTTTATTATCTGCAAAAGA ATCATAAAGGATAAATAGAACTTAAAACAGGAGAATTCACTGATTATTAG TTAATTCCTGTTGTGTTTTCGACATACAGAATTCTTTGATGGCTAAGTTT TGAACCAGATAGATAGTTTATTTTCAGTAAACAAAAGGGGAAACAATATT GTTGGGAATATTTGTGGGAGGGTTTGGCTTTTATTATGTTCTTGAAGCGG CTTCTAAAAGTTACCTTTCTCCATCCACTTTGAACTTTTTTTTTATGAAA AATTTTGTTCACATTTTCTAACACTGCTGGTGTTGTTTGTCTACACCATC TTGGATCATCATTGTTTTCCATTTTGTATCAGTCTTGTTTTGATGCATAT ATCATTGGTTGGTTTCCAGGTAAACAATATTAGTATTTTTCTATTACCTG TAAATTCAGCTGGACCCATTTCTTCTCCGTCTAATTGTGTAATTTGTGCC ATTGAGGGCATTCATAGTATATTTTGCAATATCATCGGGAAAGAATCAAG CTTCTTAGATGATGAAGCATCTTAGAGTTTTTCACTCATAAATTGTACAT TTGAATACTGTGTTCCTTCTTAATGCAGTCAAAACATTTTTACCATCTTA TTGACATAACTTCTCTGTAATTCAGGCACCCCCTGTGATAGTATTCTCTT CAGCATGCGCGGGACTGACAGGTGAGTTCTGAATTTGTTGTTTTTTGCTG GCATGTGTATAATACTCCTTCTGTGTTGTTTTTGAATTTGTAATTCTGTA GGGAAAGTTTTGGGAAAATAAAAAACACCTACAAGACTTAGTTGTGTTGA GAAGTGAAAAAACTTTTATGACAACACCTACTTAAAATGTTTTTCTGTTT CTATGGAGTGCTAGCCATTGTATTTGTACATTTGAGTAGTCAAAATTCTT GATTGAAACCGTGAACTTATTGTTTTTTATTGTGTTAATAATTGAAGAAT CATAACCTGTGTTTATCATGTTATCATCTGACAATTCAATTCAAGTATTG GAAGTCTTCATTTATAGGAGGACAAGGGGTGAAGTTTGTTTCATGCTGAT GAAAGTTTCATTGGCATAATGCAGGTGGTGCTATTCCTGCTGCGGCACAA CTTGTTTCCTCCTCTTATCATGCAGCATACTCATCTCCTACCGTACCTCC GCCATCAAAGAATGAAAATATTCAAAAGTCAATAAAATGAGATAATTGCT TTCTGTATGTGATCATGCATTCATCATAATGTGTGTGCTGATGAGTTT
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Coding sequence (CDS) from alignment at chr04:7195140..7198387-

>rna-XM_022779740.1_VrVC1973A-SNU_v1 ID=rna-XM_022779740.1_VrVC1973A-SNU_v1; Name=rna-XM_022779740.1; organism=Vigna radiata; type=CDS; length=423bp; location=Sequence derived from: chr04:7195140..7198387- (Vigna radiata
ATGCAGCACTGTGATAATAACATGGAAACCTCCAAACTCAGTAACAGTAC
TCAAAATATTCGATGCCATCACTGCGCAGGGCCCCTTTCAAACCGCATGG
AAACTAGTCTCTGGAACGTTTCGCCTCTCATCAGGGATAGCTTCTCTATG
ATTGGTTCTGCCGTTGGCGGCACGGCGAGTGCATTTTATGGATTCAATCT
TGTTATGCCAATTGTCCAGAGAAGAATAAAAGGACCCATGTGGTTGCATT
TTTTCATTGGTGCACCCCCTGTGATAGTATTCTCTTCAGCATGCGCGGGA
CTGACAGGTGGTGCTATTCCTGCTGCGGCACAACTTGTTTCCTCCTCTTA
TCATGCAGCATACTCATCTCCTACCGTACCTCCGCCATCAAAGAATGAAA
ATATTCAAAAGTCAATAAAATGA
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