rna-XM_022782546.1

Transcript Overview
Namerna-XM_022782546.1
Unique Namerna-XM_022782546.1_VrVC1973A-SNU_v1
TypemRNA
OrganismVigna radiata (Mung bean, green gram)
Sequence length804
Productuncharacterized LOC106763765, transcript variant X4
References
External references for this mRNA
DatabaseAccession
GeneID106763765
GenbankXM_022782546.1
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr06chromosomechr06:35230213..35234244 +Vigna radiata cv. VC1973A genome v6.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
asvrvL158Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvrvL652Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anvrvL0720Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL0861Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ccvrvL0959Cajanus cajan Asha genome v1.0Cajanus cajan
pvvrvL046Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
psvrvL522Pisum sativum Cameor genome v1aPisum sativum
psvrvL525Pisum sativum Cameor genome v1aPisum sativum
pvvrvL763Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
tifvrvL284Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvrvL363Vicia faba cv. Tiffany genome v1.0Vicia faba
vrvvrvL163Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvrvL296Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvrvL377Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvssR563Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvssR591Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvzwsR467Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvzwsR501Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvvuaR405Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvvuR448Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vrvvuaR431Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvvuR459Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canvrvL288Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvrvL408Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvrvL456Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvrvL604Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvrvL287Cicer arietinum
carvrvL421Cicer arietinum
ccavrvL457Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavrvL589Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vrvvumR465Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvumR473Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvvaR531Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvvaR564Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvstR459Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vrvvstR467Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvrvL238Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvrvL302Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvrvL039Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvrvL711Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vrvvunR422Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vrvvunR433Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LOC106763765gene-LOC106763765_VrVC1973A-SNU_v1Vigna radiatagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_022782546.1-1exon-XM_022782546.1-1_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_022782546.1-2exon-XM_022782546.1-2_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_022782546.1-3exon-XM_022782546.1-3_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_022782546.1-4exon-XM_022782546.1-4_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_022782546.1-5exon-XM_022782546.1-5_VrVC1973A-SNU_v1Vigna radiataexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-XP_022638267.1cds-XP_022638267.1_VrVC1973A-SNU_v1Vigna radiataCDS
cds-XP_022638267.1cds-XP_022638267.1_VrVC1973A-SNU_v1_2Vigna radiataCDS
cds-XP_022638267.1cds-XP_022638267.1_VrVC1973A-SNU_v1_3Vigna radiataCDS
cds-XP_022638267.1cds-XP_022638267.1_VrVC1973A-SNU_v1_4Vigna radiataCDS
cds-XP_022638267.1cds-XP_022638267.1_VrVC1973A-SNU_v1_5Vigna radiataCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-XM_022782546.1_VrVC1973A-SNU_v1rna-XM_022782546.1_VrVC1973A-SNU_v1Vigna radiatapolypeptide
rna-XM_022782546.1_VrVC1973A-SNU_v1rna-XM_022782546.1_VrVC1973A-SNU_v1-proteinVigna radiatapolypeptide


Homology
BLAST of rna-XM_022782546.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q8L8T7|COR27_ARATH (Cold-regulated protein 27 OS=Arabidopsis thaliana OX=3702 GN=COR27 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.234e-20
Identity = 70/197 (35.53%), Postives = 103/197 (52.28%), Query Frame = 0
Query:   82 MAAEWTDEKHSMYIKSIEASFVNQLYDS-----KQMRTSFPCK-GTSCDPATTSGQFKVLRGGCWQKINFERVNPQTSRIN-----HCHDLTENPWIQHYRSSSKQRSTVAPSLQESVSTSSKVADLGQRKGI---PSGSGHLHLCESRVCHKDMLSSDTEMSGQNFVDDEVKGKKQNKKSKVKRQRSLTDAKDNDQ 264
            M  EWT+EKHS+Y+KS+EASFV+QLY+S     K    S   + G+   P+    QFKVL  G WQKIN ++  P+  RIN     + H+   +PWI+HY+   K +  V    +  V +SS       +KGI    S S    L      H  +   + E+S QNFV++ +KG  +N  SK  +   ++++   DQ
Sbjct:   44 METEWTNEKHSLYLKSMEASFVDQLYNSLGALGKNENVSESTRFGSGRKPSQE--QFKVLHDGFWQKINVKQ--PE-HRINGRHGGNSHEFLRSPWIKHYKPLVKTQIPVTDEPENQVVSSSN-----GKKGICSSGSASSLKQLSSHSRDHDQISVGEAEVSDQNFVNEGIKG--ENGSSKKMKTVMMSESSSTDQ 228          
BLAST of rna-XM_022782546.1 vs. Araport11
Match: AT5G42900.3 (| cold regulated protein 27 | Chr5:17198366-17199712 REVERSE LENGTH=245 | 201606)

HSP 1 Score: 92.8189 bits (229), Expect = 3.334e-22
Identity = 73/196 (37.24%), Postives = 105/196 (53.57%), Query Frame = 0
Query:   82 MAAEWTDEKHSMYIKSIEASFVNQLYDS-----KQMRTSFPCK-GTSCDPATTSGQFKVLRGGCWQKINFERVNPQTSRIN-----HCHDLTENPWIQHYRSSSKQRSTVAPSLQESVSTSSKVADLGQRKGI-PSGSG-HLHLCESRVCHKDMLSSDTEMSGQNFVDDEVKGKKQNKKSKVKRQRSLTDAKDNDQ 264
            M  EWT+EKHS+Y+KS+EASFV+QLY+S     K    S   + G+   P+    QFKVL  G WQKIN ++  P+  RIN     + H+   +PWI+HY+   K +  V    +  V +SS       +KGI  SGS   L    S     D +S   E+S QNFV++ +KG  +N  SK  +   ++++   DQ
Sbjct:   44 METEWTNEKHSLYLKSMEASFVDQLYNSLGALGKNENVSESTRFGSGRKPSQE--QFKVLHDGFWQKINVKQ--PE-HRINGRHGGNSHEFLRSPWIKHYKPLVKTQIPVTDEPENQVVSSSN-----GKKGICSSGSASSLKQLSSHSRDHDQISVGEEVSDQNFVNEGIKG--ENGSSKKMKTVMMSESSSTDQ 227          
BLAST of rna-XM_022782546.1 vs. Araport11
Match: AT5G42900.2 (| cold regulated protein 27 | Chr5:17198366-17199712 REVERSE LENGTH=246 | 201606)

HSP 1 Score: 90.5077 bits (223), Expect = 2.285e-21
Identity = 70/197 (35.53%), Postives = 103/197 (52.28%), Query Frame = 0
Query:   82 MAAEWTDEKHSMYIKSIEASFVNQLYDS-----KQMRTSFPCK-GTSCDPATTSGQFKVLRGGCWQKINFERVNPQTSRIN-----HCHDLTENPWIQHYRSSSKQRSTVAPSLQESVSTSSKVADLGQRKGI---PSGSGHLHLCESRVCHKDMLSSDTEMSGQNFVDDEVKGKKQNKKSKVKRQRSLTDAKDNDQ 264
            M  EWT+EKHS+Y+KS+EASFV+QLY+S     K    S   + G+   P+    QFKVL  G WQKIN ++  P+  RIN     + H+   +PWI+HY+   K +  V    +  V +SS       +KGI    S S    L      H  +   + E+S QNFV++ +KG  +N  SK  +   ++++   DQ
Sbjct:   44 METEWTNEKHSLYLKSMEASFVDQLYNSLGALGKNENVSESTRFGSGRKPSQE--QFKVLHDGFWQKINVKQ--PE-HRINGRHGGNSHEFLRSPWIKHYKPLVKTQIPVTDEPENQVVSSSN-----GKKGICSSGSASSLKQLSSHSRDHDQISVGEAEVSDQNFVNEGIKG--ENGSSKKMKTVMMSESSSTDQ 228          
BLAST of rna-XM_022782546.1 vs. Araport11
Match: AT5G42900.1 (| cold regulated protein 27 | Chr5:17198366-17199712 REVERSE LENGTH=246 | 201606)

HSP 1 Score: 90.5077 bits (223), Expect = 2.285e-21
Identity = 70/197 (35.53%), Postives = 103/197 (52.28%), Query Frame = 0
Query:   82 MAAEWTDEKHSMYIKSIEASFVNQLYDS-----KQMRTSFPCK-GTSCDPATTSGQFKVLRGGCWQKINFERVNPQTSRIN-----HCHDLTENPWIQHYRSSSKQRSTVAPSLQESVSTSSKVADLGQRKGI---PSGSGHLHLCESRVCHKDMLSSDTEMSGQNFVDDEVKGKKQNKKSKVKRQRSLTDAKDNDQ 264
            M  EWT+EKHS+Y+KS+EASFV+QLY+S     K    S   + G+   P+    QFKVL  G WQKIN ++  P+  RIN     + H+   +PWI+HY+   K +  V    +  V +SS       +KGI    S S    L      H  +   + E+S QNFV++ +KG  +N  SK  +   ++++   DQ
Sbjct:   44 METEWTNEKHSLYLKSMEASFVDQLYNSLGALGKNENVSESTRFGSGRKPSQE--QFKVLHDGFWQKINVKQ--PE-HRINGRHGGNSHEFLRSPWIKHYKPLVKTQIPVTDEPENQVVSSSN-----GKKGICSSGSASSLKQLSSHSRDHDQISVGEAEVSDQNFVNEGIKG--ENGSSKKMKTVMMSESSSTDQ 228          
BLAST of rna-XM_022782546.1 vs. UniProtKB/TrEMBL
Match: tr|A0A3Q0F776|A0A3Q0F776_VIGRR (uncharacterized protein LOC106763765 isoform X4 OS=Vigna radiata var. radiata OX=3916 GN=LOC106763765 PE=4 SV=1)

HSP 1 Score: 561.992 bits (1447), Expect = 0.000e+0
Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 0
Query:    1 MTRVKAQTTVFPFCSPSPPLSLLLFIHFLHLPIPIANKNITYIHTYKMNNNFRVTRTPEETPTTSSTFLNPIQGIREIESTMAAEWTDEKHSMYIKSIEASFVNQLYDSKQMRTSFPCKGTSCDPATTSGQFKVLRGGCWQKINFERVNPQTSRINHCHDLTENPWIQHYRSSSKQRSTVAPSLQESVSTSSKVADLGQRKGIPSGSGHLHLCESRVCHKDMLSSDTEMSGQNFVDDEVKGKKQNKKSKVKRQRSLTDAKDNDQGAK 267
            MTRVKAQTTVFPFCSPSPPLSLLLFIHFLHLPIPIANKNITYIHTYKMNNNFRVTRTPEETPTTSSTFLNPIQGIREIESTMAAEWTDEKHSMYIKSIEASFVNQLYDSKQMRTSFPCKGTSCDPATTSGQFKVLRGGCWQKINFERVNPQTSRINHCHDLTENPWIQHYRSSSKQRSTVAPSLQESVSTSSKVADLGQRKGIPSGSGHLHLCESRVCHKDMLSSDTEMSGQNFVDDEVKGKKQNKKSKVKRQRSLTDAKDNDQGAK
Sbjct:    1 MTRVKAQTTVFPFCSPSPPLSLLLFIHFLHLPIPIANKNITYIHTYKMNNNFRVTRTPEETPTTSSTFLNPIQGIREIESTMAAEWTDEKHSMYIKSIEASFVNQLYDSKQMRTSFPCKGTSCDPATTSGQFKVLRGGCWQKINFERVNPQTSRINHCHDLTENPWIQHYRSSSKQRSTVAPSLQESVSTSSKVADLGQRKGIPSGSGHLHLCESRVCHKDMLSSDTEMSGQNFVDDEVKGKKQNKKSKVKRQRSLTDAKDNDQGAK 267          
BLAST of rna-XM_022782546.1 vs. UniProtKB/TrEMBL
Match: tr|A0A3Q0F446|A0A3Q0F446_VIGRR (uncharacterized protein LOC106763765 isoform X3 OS=Vigna radiata var. radiata OX=3916 GN=LOC106763765 PE=4 SV=1)

HSP 1 Score: 556.214 bits (1432), Expect = 0.000e+0
Identity = 267/270 (98.89%), Postives = 267/270 (98.89%), Query Frame = 0
Query:    1 MTRVKAQTTVFPFCSPSPPLSLLLFIHFLHLPIPIANKNITYIHTYKMNNNFRVTRTPEETPTTSSTFLNPIQGIREIESTMAAEWTDEKHSMYIKSIEASFVNQLYDSKQMRTSFPCKGTSCDPATTSGQFKVLRGGCWQKINFERVNPQTSRINHCHDLTENPWIQHYRSSSKQRSTVAPSLQESVSTSSKVADLGQRKGIPSGSGHLHLCESRVCHKDMLSSDTEMSGQNFVDDEVKGKKQNKKSKVKRQRSLTDAKDND---QGAK 267
            MTRVKAQTTVFPFCSPSPPLSLLLFIHFLHLPIPIANKNITYIHTYKMNNNFRVTRTPEETPTTSSTFLNPIQGIREIESTMAAEWTDEKHSMYIKSIEASFVNQLYDSKQMRTSFPCKGTSCDPATTSGQFKVLRGGCWQKINFERVNPQTSRINHCHDLTENPWIQHYRSSSKQRSTVAPSLQESVSTSSKVADLGQRKGIPSGSGHLHLCESRVCHKDMLSSDTEMSGQNFVDDEVKGKKQNKKSKVKRQRSLTDAKDND   QGAK
Sbjct:    1 MTRVKAQTTVFPFCSPSPPLSLLLFIHFLHLPIPIANKNITYIHTYKMNNNFRVTRTPEETPTTSSTFLNPIQGIREIESTMAAEWTDEKHSMYIKSIEASFVNQLYDSKQMRTSFPCKGTSCDPATTSGQFKVLRGGCWQKINFERVNPQTSRINHCHDLTENPWIQHYRSSSKQRSTVAPSLQESVSTSSKVADLGQRKGIPSGSGHLHLCESRVCHKDMLSSDTEMSGQNFVDDEVKGKKQNKKSKVKRQRSLTDAKDNDQNFQGAK 270          
BLAST of rna-XM_022782546.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3UBS0|A0A1S3UBS0_VIGRR (uncharacterized protein LOC106763765 isoform X1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106763765 PE=4 SV=2)

HSP 1 Score: 556.214 bits (1432), Expect = 0.000e+0
Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 0
Query:    1 MTRVKAQTTVFPFCSPSPPLSLLLFIHFLHLPIPIANKNITYIHTYKMNNNFRVTRTPEETPTTSSTFLNPIQGIREIESTMAAEWTDEKHSMYIKSIEASFVNQLYDSKQMRTSFPCKGTSCDPATTSGQFKVLRGGCWQKINFERVNPQTSRINHCHDLTENPWIQHYRSSSKQRSTVAPSLQESVSTSSKVADLGQRKGIPSGSGHLHLCESRVCHKDMLSSDTEMSGQNFVDDEVKGKKQNKKSKVKRQRSLTDAKDNDQ 264
            MTRVKAQTTVFPFCSPSPPLSLLLFIHFLHLPIPIANKNITYIHTYKMNNNFRVTRTPEETPTTSSTFLNPIQGIREIESTMAAEWTDEKHSMYIKSIEASFVNQLYDSKQMRTSFPCKGTSCDPATTSGQFKVLRGGCWQKINFERVNPQTSRINHCHDLTENPWIQHYRSSSKQRSTVAPSLQESVSTSSKVADLGQRKGIPSGSGHLHLCESRVCHKDMLSSDTEMSGQNFVDDEVKGKKQNKKSKVKRQRSLTDAKDNDQ
Sbjct:    1 MTRVKAQTTVFPFCSPSPPLSLLLFIHFLHLPIPIANKNITYIHTYKMNNNFRVTRTPEETPTTSSTFLNPIQGIREIESTMAAEWTDEKHSMYIKSIEASFVNQLYDSKQMRTSFPCKGTSCDPATTSGQFKVLRGGCWQKINFERVNPQTSRINHCHDLTENPWIQHYRSSSKQRSTVAPSLQESVSTSSKVADLGQRKGIPSGSGHLHLCESRVCHKDMLSSDTEMSGQNFVDDEVKGKKQNKKSKVKRQRSLTDAKDNDQ 264          
BLAST of rna-XM_022782546.1 vs. UniProtKB/TrEMBL
Match: tr|A0A3Q0F2M2|A0A3Q0F2M2_VIGRR (uncharacterized protein LOC106763765 isoform X2 OS=Vigna radiata var. radiata OX=3916 GN=LOC106763765 PE=4 SV=1)

HSP 1 Score: 555.829 bits (1431), Expect = 0.000e+0
Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 0
Query:    1 MTRVKAQTTVFPFCSPSPPLSLLLFIHFLHLPIPIANKNITYIHTYKMNNNFRVTRTPEETPTTSSTFLNPIQGIREIESTMAAEWTDEKHSMYIKSIEASFVNQLYDSKQMRTSFPCKGTSCDPATTSGQFKVLRGGCWQKINFERVNPQTSRINHCHDLTENPWIQHYRSSSKQRSTVAPSLQESVSTSSKVADLGQRKGIPSGSGHLHLCESRVCHKDMLSSDTEMSGQNFVDDEVKGKKQNKKSKVKRQRSLTDAKDNDQ 264
            MTRVKAQTTVFPFCSPSPPLSLLLFIHFLHLPIPIANKNITYIHTYKMNNNFRVTRTPEETPTTSSTFLNPIQGIREIESTMAAEWTDEKHSMYIKSIEASFVNQLYDSKQMRTSFPCKGTSCDPATTSGQFKVLRGGCWQKINFERVNPQTSRINHCHDLTENPWIQHYRSSSKQRSTVAPSLQESVSTSSKVADLGQRKGIPSGSGHLHLCESRVCHKDMLSSDTEMSGQNFVDDEVKGKKQNKKSKVKRQRSLTDAKDNDQ
Sbjct:    1 MTRVKAQTTVFPFCSPSPPLSLLLFIHFLHLPIPIANKNITYIHTYKMNNNFRVTRTPEETPTTSSTFLNPIQGIREIESTMAAEWTDEKHSMYIKSIEASFVNQLYDSKQMRTSFPCKGTSCDPATTSGQFKVLRGGCWQKINFERVNPQTSRINHCHDLTENPWIQHYRSSSKQRSTVAPSLQESVSTSSKVADLGQRKGIPSGSGHLHLCESRVCHKDMLSSDTEMSGQNFVDDEVKGKKQNKKSKVKRQRSLTDAKDNDQ 264          
BLAST of rna-XM_022782546.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9V2R0|A0A0L9V2R0_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan07g270800 PE=4 SV=1)

HSP 1 Score: 436.032 bits (1120), Expect = 1.197e-152
Identity = 254/269 (94.42%), Postives = 258/269 (95.91%), Query Frame = 0
Query:    1 MTRVKAQTTVFPFCSPSPPLSLLLFIHFLHLPIPIANKNITYIHTYKMNNNFRVTRTPEETPTTSSTFLN----PIQGIREIESTMAAEWTDEKHSMYIKSIEASFVNQLYDSKQMRTSFPCKGTSCDPATTSGQFKVLRGGCWQKINFERVNPQTSRINHCHDLTENPWIQHYRSSSKQRSTVAPSLQESVSTSSKVADLGQRKGIPSGSGHLHLCESRVCHKDMLSSDTEMSGQNFVDDEVKGKKQNKKSKVKRQRSLTDAKDNDQG 265
            MTRVKAQTTVFPFCSPS PLSLLLFIHFLHLPIPIANKNIT+ HTYKMNNNFRVTRTPEETPTTSSTFLN    PIQGIREI+STMAAEWTDEKHSMYIKSIEASFVNQLYDSKQMR SFPCKGTSCDPATTSGQFKVLRGGCWQKINFER  PQTSRIN CHDLTENPWIQHYRSSSKQR+TVAPSLQESVSTS+KV DLGQRKGIPSGSGHLHLCESRVCHKDMLSSDTEMSGQNFVDDEVKGKKQNKKSKVKRQRSLTDAKDNDQG
Sbjct:    1 MTRVKAQTTVFPFCSPSLPLSLLLFIHFLHLPIPIANKNITHKHTYKMNNNFRVTRTPEETPTTSSTFLNSHNNPIQGIREIDSTMAAEWTDEKHSMYIKSIEASFVNQLYDSKQMRASFPCKGTSCDPATTSGQFKVLRGGCWQKINFER--PQTSRINQCHDLTENPWIQHYRSSSKQRNTVAPSLQESVSTSNKVVDLGQRKGIPSGSGHLHLCESRVCHKDMLSSDTEMSGQNFVDDEVKGKKQNKKSKVKRQRSLTDAKDNDQG 267          
BLAST of rna-XM_022782546.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3RQ01|A0A0S3RQ01_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.03G270300 PE=4 SV=1)

HSP 1 Score: 432.95 bits (1112), Expect = 3.249e-151
Identity = 253/268 (94.40%), Postives = 257/268 (95.90%), Query Frame = 0
Query:    1 MTRVKAQTTVFPFCSPSPPLSLLLFIHFLHLPIPIANKNITYIHTYKMNNNFRVTRTPEETPTTSSTFLN----PIQGIREIESTMAAEWTDEKHSMYIKSIEASFVNQLYDSKQMRTSFPCKGTSCDPATTSGQFKVLRGGCWQKINFERVNPQTSRINHCHDLTENPWIQHYRSSSKQRSTVAPSLQESVSTSSKVADLGQRKGIPSGSGHLHLCESRVCHKDMLSSDTEMSGQNFVDDEVKGKKQNKKSKVKRQRSLTDAKDNDQ 264
            MTRVKAQTTVFPFCSPS PLSLLLFIHFLHLPIPIANKNIT+ HTYKMNNNFRVTRTPEETPTTSSTFLN    PIQGIREI+STMAAEWTDEKHSMYIKSIEASFVNQLYDSKQMR SFPCKGTSCDPATTSGQFKVLRGGCWQKINFER  PQTSRIN CHDLTENPWIQHYRSSSKQR+TVAPSLQESVSTS+KV DLGQRKGIPSGSGHLHLCESRVCHKDMLSSDTEMSGQNFVDDEVKGKKQNKKSKVKRQRSLTDAKDNDQ
Sbjct:    1 MTRVKAQTTVFPFCSPSLPLSLLLFIHFLHLPIPIANKNITHKHTYKMNNNFRVTRTPEETPTTSSTFLNSHNNPIQGIREIDSTMAAEWTDEKHSMYIKSIEASFVNQLYDSKQMRASFPCKGTSCDPATTSGQFKVLRGGCWQKINFER--PQTSRINQCHDLTENPWIQHYRSSSKQRNTVAPSLQESVSTSNKVVDLGQRKGIPSGSGHLHLCESRVCHKDMLSSDTEMSGQNFVDDEVKGKKQNKKSKVKRQRSLTDAKDNDQ 266          
BLAST of rna-XM_022782546.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6MDB1|A0A4D6MDB1_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG7g245 PE=4 SV=1)

HSP 1 Score: 372.089 bits (954), Expect = 8.383e-128
Identity = 201/221 (90.95%), Postives = 202/221 (91.40%), Query Frame = 0
Query:   48 MNNNFRVTRTPEETPTTSSTFLN----PIQGIREIESTMAAEWTDEKHSMYIKSIEASFVNQLYDSKQMRTSFPCKGTSCDPATTSGQFKVLRGGCWQKINFERVNPQTSRINHCHDLTENPWIQHYRSSSKQRSTVAPSLQESVSTSSKVADLGQRKGIPSGSGHLHLCESRVCHKDMLSSDTEMSGQNFVDDEVKGKKQNKKSKVKRQRSLTDAKDNDQ 264
            M NNFRVT TPEE PTTSSTFLN    PIQGIREIE TMAAEWTDEKHSMYIKSIEASFVNQLYDSKQM+ SF  KGTS DPATTSGQFKVLRGGCWQKINFERVNPQTSR N CHDL ENPWIQHYRSSSKQRSTVAPSLQESVSTSSKV DLGQRKG PSGSGHLHLCESRVCHKDMLSSDTEMSGQNFVDDEVKGKKQNKK K KRQRSLTDAKDNDQ
Sbjct:    1 MKNNFRVTTTPEEAPTTSSTFLNSINNPIQGIREIEPTMAAEWTDEKHSMYIKSIEASFVNQLYDSKQMKASFSLKGTSGDPATTSGQFKVLRGGCWQKINFERVNPQTSRSNQCHDLAENPWIQHYRSSSKQRSTVAPSLQESVSTSSKVVDLGQRKGTPSGSGHLHLCESRVCHKDMLSSDTEMSGQNFVDDEVKGKKQNKKCKGKRQRSLTDAKDNDQ 221          
BLAST of rna-XM_022782546.1 vs. UniProtKB/TrEMBL
Match: tr|V7CVB3|V7CVB3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_001G022200g PE=4 SV=1)

HSP 1 Score: 361.303 bits (926), Expect = 8.976e-124
Identity = 199/228 (87.28%), Postives = 203/228 (89.04%), Query Frame = 0
Query:   48 MNNNFRVTRTPEE----TPTTSSTFL-----NPIQGIREIESTMAAEWTDEKHSMYIKSIEASFVNQLYDSKQMRTSFPCKGTSCDPATTSGQFKVLRGGCWQKINFERVNPQTSRINHCHDLTENPWIQHYRSSSKQRSTVAPSLQESVSTSSKVADLGQRKGIPSGSGHLHLCESRVCHKDMLSS--DTEMSGQNFVDDEVKGKKQNKKSKVKRQRSL-TDAKDND 263
            MNNNFRVT T EE     PTTSSTFL     NPIQGIREI+STMAAEWTDEKHSMYIKSIEASFVNQLYDSKQM+ SF CKGTSCDPATTSGQFKVLRGGCWQKINFER+NPQTSRIN  HDL ENPWIQHYRSSSKQRSTV PSLQESV  SSKV DLGQRKG PSGSGHLHLCESRVCHKDMLSS  DTEMSGQNFVDDEVKGKKQNKKSKVKRQRSL TDAKDN+
Sbjct:    1 MNNNFRVTTTTEEQQQQAPTTSSTFLTSHNNNPIQGIREIDSTMAAEWTDEKHSMYIKSIEASFVNQLYDSKQMKASFSCKGTSCDPATTSGQFKVLRGGCWQKINFERLNPQTSRINQRHDLGENPWIQHYRSSSKQRSTVVPSLQESVHASSKVVDLGQRKGTPSGSGHLHLCESRVCHKDMLSSDTDTEMSGQNFVDDEVKGKKQNKKSKVKRQRSLITDAKDNN 228          
BLAST of rna-XM_022782546.1 vs. UniProtKB/TrEMBL
Match: tr|V7CRN3|V7CRN3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_001G022200g PE=4 SV=1)

HSP 1 Score: 360.918 bits (925), Expect = 2.509e-123
Identity = 199/228 (87.28%), Postives = 203/228 (89.04%), Query Frame = 0
Query:   48 MNNNFRVTRTPEE----TPTTSSTFL-----NPIQGIREIESTMAAEWTDEKHSMYIKSIEASFVNQLYDSKQMRTSFPCKGTSCDPATTSGQFKVLRGGCWQKINFERVNPQTSRINHCHDLTENPWIQHYRSSSKQRSTVAPSLQESVSTSSKVADLGQRKGIPSGSGHLHLCESRVCHKDMLSS--DTEMSGQNFVDDEVKGKKQNKKSKVKRQRSL-TDAKDND 263
            MNNNFRVT T EE     PTTSSTFL     NPIQGIREI+STMAAEWTDEKHSMYIKSIEASFVNQLYDSKQM+ SF CKGTSCDPATTSGQFKVLRGGCWQKINFER+NPQTSRIN  HDL ENPWIQHYRSSSKQRSTV PSLQESV  SSKV DLGQRKG PSGSGHLHLCESRVCHKDMLSS  DTEMSGQNFVDDEVKGKKQNKKSKVKRQRSL TDAKDN+
Sbjct:    1 MNNNFRVTTTTEEQQQQAPTTSSTFLTSHNNNPIQGIREIDSTMAAEWTDEKHSMYIKSIEASFVNQLYDSKQMKASFSCKGTSCDPATTSGQFKVLRGGCWQKINFERLNPQTSRINQRHDLGENPWIQHYRSSSKQRSTVVPSLQESVHASSKVVDLGQRKGTPSGSGHLHLCESRVCHKDMLSSDTDTEMSGQNFVDDEVKGKKQNKKSKVKRQRSLITDAKDNN 228          
BLAST of rna-XM_022782546.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0R0FHV6|A0A0R0FHV6_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100814610 PE=4 SV=1)

HSP 1 Score: 335.109 bits (858), Expect = 9.591e-114
Identity = 180/221 (81.45%), Postives = 191/221 (86.43%), Query Frame = 0
Query:   48 MNNNFRVTRTPEETPTTSSTFLNPIQGIREIESTMAAEWTDEKHSMYIKSIEASFVNQLYDSKQMRTSFPCKGTSCDPATTSGQFKVLRGGCWQKINFERVNPQTSRINHCHDLTENPWIQHYRSSSKQRSTVAPSLQESVSTSSKVADLGQRKGIPSGSGHLHLCESRVCHKDMLSSDTEMSGQNFVDDEVKGKKQNKKSKVKRQRSL-TDAKDNDQGAK 267
            M NNFR+ RT E+T  +S     P QGIRE ESTMA EWTDEKHSMYIKSIEASFVNQLYDSKQM+TS+       DPATTSGQFKVLRGGCWQKINFERVNPQTSRIN CHDLTENPWIQHYRSSSKQRS    SLQESV+T+SKV DLGQRKG+PSGSGHLHLCESRVCHKDML SDTEMS QNFVD+EVKGKKQNKKSKVKRQRSL +DA+DNDQG K
Sbjct:    1 MKNNFRLIRT-EKTRISS-----PTQGIRETESTMAPEWTDEKHSMYIKSIEASFVNQLYDSKQMKTSY-------DPATTSGQFKVLRGGCWQKINFERVNPQTSRINQCHDLTENPWIQHYRSSSKQRSIAVSSLQESVTTTSKVVDLGQRKGVPSGSGHLHLCESRVCHKDMLYSDTEMSDQNFVDEEVKGKKQNKKSKVKRQRSLISDAQDNDQGTK 208          
The following BLAST results are available for this feature:
BLAST of rna-XM_022782546.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
sp|Q8L8T7|COR27_ARATH2.234e-2035.53Cold-regulated protein 27 OS=Arabidopsis thaliana ... [more]
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BLAST of rna-XM_022782546.1 vs. Araport11
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11)
Total hits: 3
Match NameE-valueIdentityDescription
AT5G42900.33.334e-2237.24| cold regulated protein 27 | Chr5:17198366-171997... [more]
AT5G42900.22.285e-2135.53| cold regulated protein 27 | Chr5:17198366-171997... [more]
AT5G42900.12.285e-2135.53| cold regulated protein 27 | Chr5:17198366-171997... [more]
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BLAST of rna-XM_022782546.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A3Q0F776|A0A3Q0F776_VIGRR0.000e+0100.00uncharacterized protein LOC106763765 isoform X4 OS... [more]
tr|A0A3Q0F446|A0A3Q0F446_VIGRR0.000e+098.89uncharacterized protein LOC106763765 isoform X3 OS... [more]
tr|A0A1S3UBS0|A0A1S3UBS0_VIGRR0.000e+0100.00uncharacterized protein LOC106763765 isoform X1 OS... [more]
tr|A0A3Q0F2M2|A0A3Q0F2M2_VIGRR0.000e+0100.00uncharacterized protein LOC106763765 isoform X2 OS... [more]
tr|A0A0L9V2R0|A0A0L9V2R0_PHAAN1.197e-15294.42Uncharacterized protein OS=Phaseolus angularis OX=... [more]
tr|A0A0S3RQ01|A0A0S3RQ01_PHAAN3.249e-15194.40Uncharacterized protein OS=Vigna angularis var. an... [more]
tr|A0A4D6MDB1|A0A4D6MDB1_VIGUN8.383e-12890.95Uncharacterized protein OS=Vigna unguiculata OX=39... [more]
tr|V7CVB3|V7CVB3_PHAVU8.976e-12487.28Uncharacterized protein OS=Phaseolus vulgaris OX=3... [more]
tr|V7CRN3|V7CRN3_PHAVU2.509e-12387.28Uncharacterized protein OS=Phaseolus vulgaris OX=3... [more]
tr|A0A0R0FHV6|A0A0R0FHV6_SOYBN9.591e-11481.45Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0
Date Performed: 2023-06-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 251..267
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 227..267
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 169..196
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 169..201
IPR044678Cold-regulated protein 27/28PANTHERPTHR33676COLD REGULATED PROTEIN 27coord: 77..264

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-XM_022782546.1_VrVC1973A-SNU_v1 ID=rna-XM_022782546.1_VrVC1973A-SNU_v1; Name=rna-XM_022782546.1; organism=Vigna radiata; type=mRNA; length=804bp
ATGACACGTGTAAAAGCGCAGACAACTGTATTCCCTTTTTGTTCACCATC
ACCGCCCCTTTCTCTCCTCTTATTCATTCATTTCCTTCACCTTCCAATTC
CCATTGCAAACAAAAATATCACATACATACATACCTATAAGATGAACAAC
AATTTCAGAGTAACAAGAACGCCAGAAGAAACTCCAACCACTTCTTCCAC
CTTCCTCAACCCGATTCAGGGCATTAGAGAGATAGAATCCACAATGGCTG
CAGAGTGGACAGATGAGAAACACAGCATGTATATCAAGTCTATAGAAGCA
TCTTTTGTTAATCAGTTATATGATTCTAAGCAAATGAGGACTTCCTTTCC
CTGCAAAGGAACTTCCTGTGACCCTGCTACCACTTCTGGCCAGTTCAAGG
TACTTCGTGGCGGGTGTTGGCAAAAAATCAATTTTGAAAGAGTGAATCCG
CAAACGAGTAGGATTAACCACTGTCATGATTTGACGGAAAATCCATGGAT
TCAGCACTATCGATCTTCAAGCAAACAGAGAAGCACAGTTGCTCCATCCC
TTCAAGAAAGTGTCAGTACCTCAAGCAAAGTTGCTGATTTAGGCCAAAGG
AAAGGAATTCCCTCTGGGTCAGGACATCTTCATTTGTGTGAATCTCGTGT
CTGCCATAAAGATATGCTTTCTAGTGACACAGAGATGTCAGGCCAGAACT
TTGTTGATGATGAAGTGAAAGGCAAAAAGCAGAATAAAAAAAGCAAAGTG
AAACGACAAAGATCTTTAACTGATGCAAAAGACAATGATCAGGGGGCAAA
ATAA
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protein sequence of rna-XM_022782546.1_VrVC1973A-SNU_v1

>rna-XM_022782546.1_VrVC1973A-SNU_v1 ID=rna-XM_022782546.1_VrVC1973A-SNU_v1; Name=rna-XM_022782546.1_VrVC1973A-SNU_v1; organism=Vigna radiata; type=polypeptide; length=267bp
MTRVKAQTTVFPFCSPSPPLSLLLFIHFLHLPIPIANKNITYIHTYKMNN
NFRVTRTPEETPTTSSTFLNPIQGIREIESTMAAEWTDEKHSMYIKSIEA
SFVNQLYDSKQMRTSFPCKGTSCDPATTSGQFKVLRGGCWQKINFERVNP
QTSRINHCHDLTENPWIQHYRSSSKQRSTVAPSLQESVSTSSKVADLGQR
KGIPSGSGHLHLCESRVCHKDMLSSDTEMSGQNFVDDEVKGKKQNKKSKV
KRQRSLTDAKDNDQGAK
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mRNA from alignment at chr06:35230213..35234244+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-XM_022782546.1_VrVC1973A-SNU_v1 ID=rna-XM_022782546.1_VrVC1973A-SNU_v1; Name=rna-XM_022782546.1; organism=Vigna radiata; type=mRNA; length=4032bp; location=Sequence derived from: chr06:35230213..35234244+ (Vigna radiata
ACAATATAATAGAACTGTCGTTGATGTGAATGAGaattaatattatgaaa attttgttataataagaTAAACAATGTGAGGAAGGAAAATAACAGATATT TTGATGGGCAGATGAAAATATCTCCCATGCTAATGTAGCCTGACGGTGAC GTGGCCATGGATTGGCCCCATGACACGTGTAAAAGCGCAGACAACTGTAT TCCCTTTTTGTTCACCATCACCGCCCCTTTCTCTCCTCTTATTCATTCAT TTCCTTCACCTTCCAATTCCCATTGCAAACAAAAATATCACATACATACA TACCTATAAGATGAACAACAATTTCAGAGTAACAAGAACGCCAGAAGAAA CTCCAACCACTTCTTCCACCTTCCTCAACCCGATTCAGGTATCTTCACTC TTCGTTAACTTTcctttttactttcttaatttcttcttcttctgggGAAC TCTTGCAGTATTCTCTAGGGTTACGGATGGGATGAAGGAtgctaactttt tttttttttttttttggaaaaaagaaaatctgTTCACGCTTTGCTTGCTT GATCTGCAATGGAGAATATTCTGATATTCGtaataactctttttttattt tttctttcctttttacgAGGCGGAGATTTCATAATCTTCTTTATTTAAAT CCATTAATGATTTAAAGTCTTCCAGATATTAAATGGGAGACTTTGGAGGT ATTGGCTTTtggtaaaattattattattattattattattttcctgAAAT TTAAGTGGTTGTAATTAAGTGAAGTTTGGGTTTCAACTTGCATTACGCAA TTCATAAATAGATATCCATGTAAAGTTTGTATATTTAATGTATGATTAGA CAGGAGCTTGGTTTCATGTTATGTTTGctttatgaatttaattaaataat taggtgttttcaaaagataaatagGAAATCAATTGACGAACTTTGATTTT AAGTAACTCTGTCTGAAATCTTGCTTAACGTTTTAATATTTGTGGAATTA GAAACAACTAACtgcatataatataattattttgttctgaattaatttca caaatattttctgACACAAAGTTGGTGTGACTTTACCAAAAAATTAAACG GTGGAGTgagtttcttttcttaaaagcgaaagctttttttatttttattt ttatatatttcataattttaaaaatctcatTCTCTtcgaaaataaattaa agcacTAAATGTATAGAACTTtgttttcctttcctttccttTCAACTGAT AGAAATTTGGTTTCtaaacatttttcttgttttaatttatttttatttga aaattagtgGTATACTATCTATTCTGTTAACATGATTCTGGGGTTtgata tgtatgtatgtatgtatcaGGGCATTAGAGAGATAGAATCCACAATGGCT GCAGAGTGGACAGATGAGAAACACAGCATGTATATCAAGTCTATAGAAGC ATCTTTTGTTAATCAGTTATATGATTCTAAGCAAATGAGGACTTCCTTTC CCTGCAAAGGAACTTCCTGTGACCCTGCTACCACTTCTGGCCAGgtttcc tttttaatttgttcTGCACTGACTTGTTTTAATatgaacaaaaattaaga tatgGATTTGGTTGTTATCATGAATGTCATCACTATAAATCTCTAAATGC AAAGATTTGTCAATCTGTAATTAACATAGACACGACTTTGAGTCTGTTAT GGTAAAATCAAACATCAATTAGCTTATCATGAAGCTATAAGATTAGCCTG GTAAAAATTGGAAGGGAGAGTTAACCAATTTGGAATTGAAAACTCGGTTT TTGCcttataaaagattatatacaCGGTCTATGATGATCTTAGATTAACT TGTATGCCTTCCCTCTTCTCTTACACCTTAAGAGGactaagttatttttt tcttttgaactgTAACAGTTCAAGGTACTTCGTGGCGGGTGTTGgcaaaa aatcaattttgaaagaGTGAATCCGCAAACGAGTAGGATTAACCACTGTC ATGATTTGACGGAAAATCCATGGATTCAGCACTATCGATCTTCAAGCAAA CAGAGAAGCACAGTTGCTCCATCCCTTCAAGAAAGTGTCAGTACCTCAAG CAAAGTTGCTGATTTAGGCCAAAGGAAAGGAATTCCCTCTGGGTCAGGAC ATCTTCATTTGTGTGAATCTCGTGTCTGCCATAAAGATATGCTTTCTAGT GACACAGGTGACCCaaattcttcttctcctttgaAAATATCATCTTCAAA ATTGGCTTTACTGTCTGCATGGCATGCTTAGCATAACCCacattgttttt ttcatttttttgttgtgttatattattttatgtttaagacCAAATATGAT TAACAAATGTTAACTGGTGGCCCTCTATAAAGGGTATACTAGAATTCCAC CTTTATAGAGTGTAATTAAGTGAATgtttagaaaattgattttatagaCT AtggttaaaatgttttaatgttattattatgttaataacCAACAAAGTGA GCATATGAGGGAAgttcattttaatctttttgaaaaaataaaaataaaat attgacctAAACCAAAAATGCACTATTTTTGGTAAGCATTATCTAACTAC TTATAAAACTTTATCTAAATCATTTGAAAGATTAAATGTGATACATTTCA Gaattagaagaataaaaaatgaacaaatttaaagaaaaaacaaattagat tttaaaaatgttagtgATACAAAATTTGTCTTGAGCtgtattaataaaaa ttcatttctttaCTCAGTACTTAACCTAAAACACATAAACACTTACTGAA ATTACATTGTGTTTTGAGTTGGTTTTGGATGATTCAACCTGAATCAAACC AGATACATAAGATTTCAGATAGGTCTGGCGTTTGCAGTGTGAAGATTATT GCTTCATGTGTGCATCATCCATAACACAATAGTTTGGTTTACTGCTTTTT TATATATCTACTCTCTGTTATGATTTGCATTCCATTTATTGAaggatttt aatttttctatctGTTCCTTGCAGAGATGTCAGGCCAGAACTttgttgat gatgaagtgaaAGGCAAAAAGCAGAATAAAAAAAGCAAAGTGAAACGACA AAGATCTTTAACTGATGCAAAAGACAATGATCAggtaatatatgatttta tattataactattttttgcCTGGGATCTCAGAATTTCATGTGCGTGGAGC TGAGTTATGACCATTTCAAATTGCTTTTTCAGATGGTACCTAACCGAAAA TCTTCTTCTGGTGGAGATTTTACCAAAGATTTCGTTTCTGCTTGATTAAA ATAGAGTGAAACTCAGTTTTGTTTCTGCAAGATTTAGAGTTGGTCACGTT AGTCTCAATCAACCATGAAAAAAAtgatactatttttaaattaaagaatg tCGATCAATCCTAATTGATGATTAAAAGAGGTGTATTATCATTGATTGAC TTCCATTTCTCAAACATTAACATGTTATCAACACACTTTTTGATAAATAC TTTTGATTAAACcctttattgttatttaaaattcataaaaagacTACAAA AGTTTTGTTGGTCTCTTGTTCGACAGAGTCTTGTTCatatttttgtagtt ttcaAGGAATTTTAATTAACAGTAGACCAGTGTGTTAAAAGAATGtgttc ttataattttttttcaatgtgaTTTTGGTTTTCTAGGACTAACGTGACTG GTCTCAAAATTTTCAGGGGGCAAAATAATAGTTTAGTCACTTAAAAATTC GAGGGGTTATCAGAAATGTGATTGCTGTAACTTTTATGGATGACACCTTC TTACTTCGCATCGGAGTTACCAGGGAATTATTACTACTGTGATTAATTCC TATGAATCAAAAAGATTCTCTGCTGAGATTGCACATGCTAATATTGTACC CAGAAATTTAATATACAATTAATACTTCTTTATGAACACCCATGCTTCGG GTTTTCTAGAGTTGTTGCTGTCTGACATAAAAATTATGAAGTTTCTGTAC ATACATGAAAACTaatttcagtattttttttc
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Coding sequence (CDS) from alignment at chr06:35230213..35234244+

>rna-XM_022782546.1_VrVC1973A-SNU_v1 ID=rna-XM_022782546.1_VrVC1973A-SNU_v1; Name=rna-XM_022782546.1; organism=Vigna radiata; type=CDS; length=804bp; location=Sequence derived from: chr06:35230213..35234244+ (Vigna radiata
ATGACACGTGTAAAAGCGCAGACAACTGTATTCCCTTTTTGTTCACCATC
ACCGCCCCTTTCTCTCCTCTTATTCATTCATTTCCTTCACCTTCCAATTC
CCATTGCAAACAAAAATATCACATACATACATACCTATAAGATGAACAAC
AATTTCAGAGTAACAAGAACGCCAGAAGAAACTCCAACCACTTCTTCCAC
CTTCCTCAACCCGATTCAGGGCATTAGAGAGATAGAATCCACAATGGCTG
CAGAGTGGACAGATGAGAAACACAGCATGTATATCAAGTCTATAGAAGCA
TCTTTTGTTAATCAGTTATATGATTCTAAGCAAATGAGGACTTCCTTTCC
CTGCAAAGGAACTTCCTGTGACCCTGCTACCACTTCTGGCCAGTTCAAGG
TACTTCGTGGCGGGTGTTGgcaaaaaatcaattttgaaagaGTGAATCCG
CAAACGAGTAGGATTAACCACTGTCATGATTTGACGGAAAATCCATGGAT
TCAGCACTATCGATCTTCAAGCAAACAGAGAAGCACAGTTGCTCCATCCC
TTCAAGAAAGTGTCAGTACCTCAAGCAAAGTTGCTGATTTAGGCCAAAGG
AAAGGAATTCCCTCTGGGTCAGGACATCTTCATTTGTGTGAATCTCGTGT
CTGCCATAAAGATATGCTTTCTAGTGACACAGAGATGTCAGGCCAGAACT
ttgttgatgatgaagtgaaAGGCAAAAAGCAGAATAAAAAAAGCAAAGTG
AAACGACAAAGATCTTTAACTGATGCAAAAGACAATGATCAgGGGGCAAA
ATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR044678COR27/28
Vocabulary: Biological Process
TermDefinition
GO:0042752regulation of circadian rhythm
GO:0009409response to cold