rna-XM_022782546.1
Transcript Overview
References
External references for this mRNA
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of rna-XM_022782546.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q8L8T7|COR27_ARATH (Cold-regulated protein 27 OS=Arabidopsis thaliana OX=3702 GN=COR27 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.234e-20 Identity = 70/197 (35.53%), Postives = 103/197 (52.28%), Query Frame = 0 Query: 82 MAAEWTDEKHSMYIKSIEASFVNQLYDS-----KQMRTSFPCK-GTSCDPATTSGQFKVLRGGCWQKINFERVNPQTSRIN-----HCHDLTENPWIQHYRSSSKQRSTVAPSLQESVSTSSKVADLGQRKGI---PSGSGHLHLCESRVCHKDMLSSDTEMSGQNFVDDEVKGKKQNKKSKVKRQRSLTDAKDNDQ 264 M EWT+EKHS+Y+KS+EASFV+QLY+S K S + G+ P+ QFKVL G WQKIN ++ P+ RIN + H+ +PWI+HY+ K + V + V +SS +KGI S S L H + + E+S QNFV++ +KG +N SK + ++++ DQ Sbjct: 44 METEWTNEKHSLYLKSMEASFVDQLYNSLGALGKNENVSESTRFGSGRKPSQE--QFKVLHDGFWQKINVKQ--PE-HRINGRHGGNSHEFLRSPWIKHYKPLVKTQIPVTDEPENQVVSSSN-----GKKGICSSGSASSLKQLSSHSRDHDQISVGEAEVSDQNFVNEGIKG--ENGSSKKMKTVMMSESSSTDQ 228
BLAST of rna-XM_022782546.1 vs. Araport11
Match: AT5G42900.3 (| cold regulated protein 27 | Chr5:17198366-17199712 REVERSE LENGTH=245 | 201606) HSP 1 Score: 92.8189 bits (229), Expect = 3.334e-22 Identity = 73/196 (37.24%), Postives = 105/196 (53.57%), Query Frame = 0 Query: 82 MAAEWTDEKHSMYIKSIEASFVNQLYDS-----KQMRTSFPCK-GTSCDPATTSGQFKVLRGGCWQKINFERVNPQTSRIN-----HCHDLTENPWIQHYRSSSKQRSTVAPSLQESVSTSSKVADLGQRKGI-PSGSG-HLHLCESRVCHKDMLSSDTEMSGQNFVDDEVKGKKQNKKSKVKRQRSLTDAKDNDQ 264 M EWT+EKHS+Y+KS+EASFV+QLY+S K S + G+ P+ QFKVL G WQKIN ++ P+ RIN + H+ +PWI+HY+ K + V + V +SS +KGI SGS L S D +S E+S QNFV++ +KG +N SK + ++++ DQ Sbjct: 44 METEWTNEKHSLYLKSMEASFVDQLYNSLGALGKNENVSESTRFGSGRKPSQE--QFKVLHDGFWQKINVKQ--PE-HRINGRHGGNSHEFLRSPWIKHYKPLVKTQIPVTDEPENQVVSSSN-----GKKGICSSGSASSLKQLSSHSRDHDQISVGEEVSDQNFVNEGIKG--ENGSSKKMKTVMMSESSSTDQ 227
BLAST of rna-XM_022782546.1 vs. Araport11
Match: AT5G42900.2 (| cold regulated protein 27 | Chr5:17198366-17199712 REVERSE LENGTH=246 | 201606) HSP 1 Score: 90.5077 bits (223), Expect = 2.285e-21 Identity = 70/197 (35.53%), Postives = 103/197 (52.28%), Query Frame = 0 Query: 82 MAAEWTDEKHSMYIKSIEASFVNQLYDS-----KQMRTSFPCK-GTSCDPATTSGQFKVLRGGCWQKINFERVNPQTSRIN-----HCHDLTENPWIQHYRSSSKQRSTVAPSLQESVSTSSKVADLGQRKGI---PSGSGHLHLCESRVCHKDMLSSDTEMSGQNFVDDEVKGKKQNKKSKVKRQRSLTDAKDNDQ 264 M EWT+EKHS+Y+KS+EASFV+QLY+S K S + G+ P+ QFKVL G WQKIN ++ P+ RIN + H+ +PWI+HY+ K + V + V +SS +KGI S S L H + + E+S QNFV++ +KG +N SK + ++++ DQ Sbjct: 44 METEWTNEKHSLYLKSMEASFVDQLYNSLGALGKNENVSESTRFGSGRKPSQE--QFKVLHDGFWQKINVKQ--PE-HRINGRHGGNSHEFLRSPWIKHYKPLVKTQIPVTDEPENQVVSSSN-----GKKGICSSGSASSLKQLSSHSRDHDQISVGEAEVSDQNFVNEGIKG--ENGSSKKMKTVMMSESSSTDQ 228
BLAST of rna-XM_022782546.1 vs. Araport11
Match: AT5G42900.1 (| cold regulated protein 27 | Chr5:17198366-17199712 REVERSE LENGTH=246 | 201606) HSP 1 Score: 90.5077 bits (223), Expect = 2.285e-21 Identity = 70/197 (35.53%), Postives = 103/197 (52.28%), Query Frame = 0 Query: 82 MAAEWTDEKHSMYIKSIEASFVNQLYDS-----KQMRTSFPCK-GTSCDPATTSGQFKVLRGGCWQKINFERVNPQTSRIN-----HCHDLTENPWIQHYRSSSKQRSTVAPSLQESVSTSSKVADLGQRKGI---PSGSGHLHLCESRVCHKDMLSSDTEMSGQNFVDDEVKGKKQNKKSKVKRQRSLTDAKDNDQ 264 M EWT+EKHS+Y+KS+EASFV+QLY+S K S + G+ P+ QFKVL G WQKIN ++ P+ RIN + H+ +PWI+HY+ K + V + V +SS +KGI S S L H + + E+S QNFV++ +KG +N SK + ++++ DQ Sbjct: 44 METEWTNEKHSLYLKSMEASFVDQLYNSLGALGKNENVSESTRFGSGRKPSQE--QFKVLHDGFWQKINVKQ--PE-HRINGRHGGNSHEFLRSPWIKHYKPLVKTQIPVTDEPENQVVSSSN-----GKKGICSSGSASSLKQLSSHSRDHDQISVGEAEVSDQNFVNEGIKG--ENGSSKKMKTVMMSESSSTDQ 228
BLAST of rna-XM_022782546.1 vs. UniProtKB/TrEMBL
Match: tr|A0A3Q0F776|A0A3Q0F776_VIGRR (uncharacterized protein LOC106763765 isoform X4 OS=Vigna radiata var. radiata OX=3916 GN=LOC106763765 PE=4 SV=1) HSP 1 Score: 561.992 bits (1447), Expect = 0.000e+0 Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 0 Query: 1 MTRVKAQTTVFPFCSPSPPLSLLLFIHFLHLPIPIANKNITYIHTYKMNNNFRVTRTPEETPTTSSTFLNPIQGIREIESTMAAEWTDEKHSMYIKSIEASFVNQLYDSKQMRTSFPCKGTSCDPATTSGQFKVLRGGCWQKINFERVNPQTSRINHCHDLTENPWIQHYRSSSKQRSTVAPSLQESVSTSSKVADLGQRKGIPSGSGHLHLCESRVCHKDMLSSDTEMSGQNFVDDEVKGKKQNKKSKVKRQRSLTDAKDNDQGAK 267 MTRVKAQTTVFPFCSPSPPLSLLLFIHFLHLPIPIANKNITYIHTYKMNNNFRVTRTPEETPTTSSTFLNPIQGIREIESTMAAEWTDEKHSMYIKSIEASFVNQLYDSKQMRTSFPCKGTSCDPATTSGQFKVLRGGCWQKINFERVNPQTSRINHCHDLTENPWIQHYRSSSKQRSTVAPSLQESVSTSSKVADLGQRKGIPSGSGHLHLCESRVCHKDMLSSDTEMSGQNFVDDEVKGKKQNKKSKVKRQRSLTDAKDNDQGAK Sbjct: 1 MTRVKAQTTVFPFCSPSPPLSLLLFIHFLHLPIPIANKNITYIHTYKMNNNFRVTRTPEETPTTSSTFLNPIQGIREIESTMAAEWTDEKHSMYIKSIEASFVNQLYDSKQMRTSFPCKGTSCDPATTSGQFKVLRGGCWQKINFERVNPQTSRINHCHDLTENPWIQHYRSSSKQRSTVAPSLQESVSTSSKVADLGQRKGIPSGSGHLHLCESRVCHKDMLSSDTEMSGQNFVDDEVKGKKQNKKSKVKRQRSLTDAKDNDQGAK 267
BLAST of rna-XM_022782546.1 vs. UniProtKB/TrEMBL
Match: tr|A0A3Q0F446|A0A3Q0F446_VIGRR (uncharacterized protein LOC106763765 isoform X3 OS=Vigna radiata var. radiata OX=3916 GN=LOC106763765 PE=4 SV=1) HSP 1 Score: 556.214 bits (1432), Expect = 0.000e+0 Identity = 267/270 (98.89%), Postives = 267/270 (98.89%), Query Frame = 0 Query: 1 MTRVKAQTTVFPFCSPSPPLSLLLFIHFLHLPIPIANKNITYIHTYKMNNNFRVTRTPEETPTTSSTFLNPIQGIREIESTMAAEWTDEKHSMYIKSIEASFVNQLYDSKQMRTSFPCKGTSCDPATTSGQFKVLRGGCWQKINFERVNPQTSRINHCHDLTENPWIQHYRSSSKQRSTVAPSLQESVSTSSKVADLGQRKGIPSGSGHLHLCESRVCHKDMLSSDTEMSGQNFVDDEVKGKKQNKKSKVKRQRSLTDAKDND---QGAK 267 MTRVKAQTTVFPFCSPSPPLSLLLFIHFLHLPIPIANKNITYIHTYKMNNNFRVTRTPEETPTTSSTFLNPIQGIREIESTMAAEWTDEKHSMYIKSIEASFVNQLYDSKQMRTSFPCKGTSCDPATTSGQFKVLRGGCWQKINFERVNPQTSRINHCHDLTENPWIQHYRSSSKQRSTVAPSLQESVSTSSKVADLGQRKGIPSGSGHLHLCESRVCHKDMLSSDTEMSGQNFVDDEVKGKKQNKKSKVKRQRSLTDAKDND QGAK Sbjct: 1 MTRVKAQTTVFPFCSPSPPLSLLLFIHFLHLPIPIANKNITYIHTYKMNNNFRVTRTPEETPTTSSTFLNPIQGIREIESTMAAEWTDEKHSMYIKSIEASFVNQLYDSKQMRTSFPCKGTSCDPATTSGQFKVLRGGCWQKINFERVNPQTSRINHCHDLTENPWIQHYRSSSKQRSTVAPSLQESVSTSSKVADLGQRKGIPSGSGHLHLCESRVCHKDMLSSDTEMSGQNFVDDEVKGKKQNKKSKVKRQRSLTDAKDNDQNFQGAK 270
BLAST of rna-XM_022782546.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3UBS0|A0A1S3UBS0_VIGRR (uncharacterized protein LOC106763765 isoform X1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106763765 PE=4 SV=2) HSP 1 Score: 556.214 bits (1432), Expect = 0.000e+0 Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 0 Query: 1 MTRVKAQTTVFPFCSPSPPLSLLLFIHFLHLPIPIANKNITYIHTYKMNNNFRVTRTPEETPTTSSTFLNPIQGIREIESTMAAEWTDEKHSMYIKSIEASFVNQLYDSKQMRTSFPCKGTSCDPATTSGQFKVLRGGCWQKINFERVNPQTSRINHCHDLTENPWIQHYRSSSKQRSTVAPSLQESVSTSSKVADLGQRKGIPSGSGHLHLCESRVCHKDMLSSDTEMSGQNFVDDEVKGKKQNKKSKVKRQRSLTDAKDNDQ 264 MTRVKAQTTVFPFCSPSPPLSLLLFIHFLHLPIPIANKNITYIHTYKMNNNFRVTRTPEETPTTSSTFLNPIQGIREIESTMAAEWTDEKHSMYIKSIEASFVNQLYDSKQMRTSFPCKGTSCDPATTSGQFKVLRGGCWQKINFERVNPQTSRINHCHDLTENPWIQHYRSSSKQRSTVAPSLQESVSTSSKVADLGQRKGIPSGSGHLHLCESRVCHKDMLSSDTEMSGQNFVDDEVKGKKQNKKSKVKRQRSLTDAKDNDQ Sbjct: 1 MTRVKAQTTVFPFCSPSPPLSLLLFIHFLHLPIPIANKNITYIHTYKMNNNFRVTRTPEETPTTSSTFLNPIQGIREIESTMAAEWTDEKHSMYIKSIEASFVNQLYDSKQMRTSFPCKGTSCDPATTSGQFKVLRGGCWQKINFERVNPQTSRINHCHDLTENPWIQHYRSSSKQRSTVAPSLQESVSTSSKVADLGQRKGIPSGSGHLHLCESRVCHKDMLSSDTEMSGQNFVDDEVKGKKQNKKSKVKRQRSLTDAKDNDQ 264
BLAST of rna-XM_022782546.1 vs. UniProtKB/TrEMBL
Match: tr|A0A3Q0F2M2|A0A3Q0F2M2_VIGRR (uncharacterized protein LOC106763765 isoform X2 OS=Vigna radiata var. radiata OX=3916 GN=LOC106763765 PE=4 SV=1) HSP 1 Score: 555.829 bits (1431), Expect = 0.000e+0 Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 0 Query: 1 MTRVKAQTTVFPFCSPSPPLSLLLFIHFLHLPIPIANKNITYIHTYKMNNNFRVTRTPEETPTTSSTFLNPIQGIREIESTMAAEWTDEKHSMYIKSIEASFVNQLYDSKQMRTSFPCKGTSCDPATTSGQFKVLRGGCWQKINFERVNPQTSRINHCHDLTENPWIQHYRSSSKQRSTVAPSLQESVSTSSKVADLGQRKGIPSGSGHLHLCESRVCHKDMLSSDTEMSGQNFVDDEVKGKKQNKKSKVKRQRSLTDAKDNDQ 264 MTRVKAQTTVFPFCSPSPPLSLLLFIHFLHLPIPIANKNITYIHTYKMNNNFRVTRTPEETPTTSSTFLNPIQGIREIESTMAAEWTDEKHSMYIKSIEASFVNQLYDSKQMRTSFPCKGTSCDPATTSGQFKVLRGGCWQKINFERVNPQTSRINHCHDLTENPWIQHYRSSSKQRSTVAPSLQESVSTSSKVADLGQRKGIPSGSGHLHLCESRVCHKDMLSSDTEMSGQNFVDDEVKGKKQNKKSKVKRQRSLTDAKDNDQ Sbjct: 1 MTRVKAQTTVFPFCSPSPPLSLLLFIHFLHLPIPIANKNITYIHTYKMNNNFRVTRTPEETPTTSSTFLNPIQGIREIESTMAAEWTDEKHSMYIKSIEASFVNQLYDSKQMRTSFPCKGTSCDPATTSGQFKVLRGGCWQKINFERVNPQTSRINHCHDLTENPWIQHYRSSSKQRSTVAPSLQESVSTSSKVADLGQRKGIPSGSGHLHLCESRVCHKDMLSSDTEMSGQNFVDDEVKGKKQNKKSKVKRQRSLTDAKDNDQ 264
BLAST of rna-XM_022782546.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9V2R0|A0A0L9V2R0_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan07g270800 PE=4 SV=1) HSP 1 Score: 436.032 bits (1120), Expect = 1.197e-152 Identity = 254/269 (94.42%), Postives = 258/269 (95.91%), Query Frame = 0 Query: 1 MTRVKAQTTVFPFCSPSPPLSLLLFIHFLHLPIPIANKNITYIHTYKMNNNFRVTRTPEETPTTSSTFLN----PIQGIREIESTMAAEWTDEKHSMYIKSIEASFVNQLYDSKQMRTSFPCKGTSCDPATTSGQFKVLRGGCWQKINFERVNPQTSRINHCHDLTENPWIQHYRSSSKQRSTVAPSLQESVSTSSKVADLGQRKGIPSGSGHLHLCESRVCHKDMLSSDTEMSGQNFVDDEVKGKKQNKKSKVKRQRSLTDAKDNDQG 265 MTRVKAQTTVFPFCSPS PLSLLLFIHFLHLPIPIANKNIT+ HTYKMNNNFRVTRTPEETPTTSSTFLN PIQGIREI+STMAAEWTDEKHSMYIKSIEASFVNQLYDSKQMR SFPCKGTSCDPATTSGQFKVLRGGCWQKINFER PQTSRIN CHDLTENPWIQHYRSSSKQR+TVAPSLQESVSTS+KV DLGQRKGIPSGSGHLHLCESRVCHKDMLSSDTEMSGQNFVDDEVKGKKQNKKSKVKRQRSLTDAKDNDQG Sbjct: 1 MTRVKAQTTVFPFCSPSLPLSLLLFIHFLHLPIPIANKNITHKHTYKMNNNFRVTRTPEETPTTSSTFLNSHNNPIQGIREIDSTMAAEWTDEKHSMYIKSIEASFVNQLYDSKQMRASFPCKGTSCDPATTSGQFKVLRGGCWQKINFER--PQTSRINQCHDLTENPWIQHYRSSSKQRNTVAPSLQESVSTSNKVVDLGQRKGIPSGSGHLHLCESRVCHKDMLSSDTEMSGQNFVDDEVKGKKQNKKSKVKRQRSLTDAKDNDQG 267
BLAST of rna-XM_022782546.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3RQ01|A0A0S3RQ01_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.03G270300 PE=4 SV=1) HSP 1 Score: 432.95 bits (1112), Expect = 3.249e-151 Identity = 253/268 (94.40%), Postives = 257/268 (95.90%), Query Frame = 0 Query: 1 MTRVKAQTTVFPFCSPSPPLSLLLFIHFLHLPIPIANKNITYIHTYKMNNNFRVTRTPEETPTTSSTFLN----PIQGIREIESTMAAEWTDEKHSMYIKSIEASFVNQLYDSKQMRTSFPCKGTSCDPATTSGQFKVLRGGCWQKINFERVNPQTSRINHCHDLTENPWIQHYRSSSKQRSTVAPSLQESVSTSSKVADLGQRKGIPSGSGHLHLCESRVCHKDMLSSDTEMSGQNFVDDEVKGKKQNKKSKVKRQRSLTDAKDNDQ 264 MTRVKAQTTVFPFCSPS PLSLLLFIHFLHLPIPIANKNIT+ HTYKMNNNFRVTRTPEETPTTSSTFLN PIQGIREI+STMAAEWTDEKHSMYIKSIEASFVNQLYDSKQMR SFPCKGTSCDPATTSGQFKVLRGGCWQKINFER PQTSRIN CHDLTENPWIQHYRSSSKQR+TVAPSLQESVSTS+KV DLGQRKGIPSGSGHLHLCESRVCHKDMLSSDTEMSGQNFVDDEVKGKKQNKKSKVKRQRSLTDAKDNDQ Sbjct: 1 MTRVKAQTTVFPFCSPSLPLSLLLFIHFLHLPIPIANKNITHKHTYKMNNNFRVTRTPEETPTTSSTFLNSHNNPIQGIREIDSTMAAEWTDEKHSMYIKSIEASFVNQLYDSKQMRASFPCKGTSCDPATTSGQFKVLRGGCWQKINFER--PQTSRINQCHDLTENPWIQHYRSSSKQRNTVAPSLQESVSTSNKVVDLGQRKGIPSGSGHLHLCESRVCHKDMLSSDTEMSGQNFVDDEVKGKKQNKKSKVKRQRSLTDAKDNDQ 266
BLAST of rna-XM_022782546.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6MDB1|A0A4D6MDB1_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG7g245 PE=4 SV=1) HSP 1 Score: 372.089 bits (954), Expect = 8.383e-128 Identity = 201/221 (90.95%), Postives = 202/221 (91.40%), Query Frame = 0 Query: 48 MNNNFRVTRTPEETPTTSSTFLN----PIQGIREIESTMAAEWTDEKHSMYIKSIEASFVNQLYDSKQMRTSFPCKGTSCDPATTSGQFKVLRGGCWQKINFERVNPQTSRINHCHDLTENPWIQHYRSSSKQRSTVAPSLQESVSTSSKVADLGQRKGIPSGSGHLHLCESRVCHKDMLSSDTEMSGQNFVDDEVKGKKQNKKSKVKRQRSLTDAKDNDQ 264 M NNFRVT TPEE PTTSSTFLN PIQGIREIE TMAAEWTDEKHSMYIKSIEASFVNQLYDSKQM+ SF KGTS DPATTSGQFKVLRGGCWQKINFERVNPQTSR N CHDL ENPWIQHYRSSSKQRSTVAPSLQESVSTSSKV DLGQRKG PSGSGHLHLCESRVCHKDMLSSDTEMSGQNFVDDEVKGKKQNKK K KRQRSLTDAKDNDQ Sbjct: 1 MKNNFRVTTTPEEAPTTSSTFLNSINNPIQGIREIEPTMAAEWTDEKHSMYIKSIEASFVNQLYDSKQMKASFSLKGTSGDPATTSGQFKVLRGGCWQKINFERVNPQTSRSNQCHDLAENPWIQHYRSSSKQRSTVAPSLQESVSTSSKVVDLGQRKGTPSGSGHLHLCESRVCHKDMLSSDTEMSGQNFVDDEVKGKKQNKKCKGKRQRSLTDAKDNDQ 221
BLAST of rna-XM_022782546.1 vs. UniProtKB/TrEMBL
Match: tr|V7CVB3|V7CVB3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_001G022200g PE=4 SV=1) HSP 1 Score: 361.303 bits (926), Expect = 8.976e-124 Identity = 199/228 (87.28%), Postives = 203/228 (89.04%), Query Frame = 0 Query: 48 MNNNFRVTRTPEE----TPTTSSTFL-----NPIQGIREIESTMAAEWTDEKHSMYIKSIEASFVNQLYDSKQMRTSFPCKGTSCDPATTSGQFKVLRGGCWQKINFERVNPQTSRINHCHDLTENPWIQHYRSSSKQRSTVAPSLQESVSTSSKVADLGQRKGIPSGSGHLHLCESRVCHKDMLSS--DTEMSGQNFVDDEVKGKKQNKKSKVKRQRSL-TDAKDND 263 MNNNFRVT T EE PTTSSTFL NPIQGIREI+STMAAEWTDEKHSMYIKSIEASFVNQLYDSKQM+ SF CKGTSCDPATTSGQFKVLRGGCWQKINFER+NPQTSRIN HDL ENPWIQHYRSSSKQRSTV PSLQESV SSKV DLGQRKG PSGSGHLHLCESRVCHKDMLSS DTEMSGQNFVDDEVKGKKQNKKSKVKRQRSL TDAKDN+ Sbjct: 1 MNNNFRVTTTTEEQQQQAPTTSSTFLTSHNNNPIQGIREIDSTMAAEWTDEKHSMYIKSIEASFVNQLYDSKQMKASFSCKGTSCDPATTSGQFKVLRGGCWQKINFERLNPQTSRINQRHDLGENPWIQHYRSSSKQRSTVVPSLQESVHASSKVVDLGQRKGTPSGSGHLHLCESRVCHKDMLSSDTDTEMSGQNFVDDEVKGKKQNKKSKVKRQRSLITDAKDNN 228
BLAST of rna-XM_022782546.1 vs. UniProtKB/TrEMBL
Match: tr|V7CRN3|V7CRN3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_001G022200g PE=4 SV=1) HSP 1 Score: 360.918 bits (925), Expect = 2.509e-123 Identity = 199/228 (87.28%), Postives = 203/228 (89.04%), Query Frame = 0 Query: 48 MNNNFRVTRTPEE----TPTTSSTFL-----NPIQGIREIESTMAAEWTDEKHSMYIKSIEASFVNQLYDSKQMRTSFPCKGTSCDPATTSGQFKVLRGGCWQKINFERVNPQTSRINHCHDLTENPWIQHYRSSSKQRSTVAPSLQESVSTSSKVADLGQRKGIPSGSGHLHLCESRVCHKDMLSS--DTEMSGQNFVDDEVKGKKQNKKSKVKRQRSL-TDAKDND 263 MNNNFRVT T EE PTTSSTFL NPIQGIREI+STMAAEWTDEKHSMYIKSIEASFVNQLYDSKQM+ SF CKGTSCDPATTSGQFKVLRGGCWQKINFER+NPQTSRIN HDL ENPWIQHYRSSSKQRSTV PSLQESV SSKV DLGQRKG PSGSGHLHLCESRVCHKDMLSS DTEMSGQNFVDDEVKGKKQNKKSKVKRQRSL TDAKDN+ Sbjct: 1 MNNNFRVTTTTEEQQQQAPTTSSTFLTSHNNNPIQGIREIDSTMAAEWTDEKHSMYIKSIEASFVNQLYDSKQMKASFSCKGTSCDPATTSGQFKVLRGGCWQKINFERLNPQTSRINQRHDLGENPWIQHYRSSSKQRSTVVPSLQESVHASSKVVDLGQRKGTPSGSGHLHLCESRVCHKDMLSSDTDTEMSGQNFVDDEVKGKKQNKKSKVKRQRSLITDAKDNN 228
BLAST of rna-XM_022782546.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0R0FHV6|A0A0R0FHV6_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100814610 PE=4 SV=1) HSP 1 Score: 335.109 bits (858), Expect = 9.591e-114 Identity = 180/221 (81.45%), Postives = 191/221 (86.43%), Query Frame = 0 Query: 48 MNNNFRVTRTPEETPTTSSTFLNPIQGIREIESTMAAEWTDEKHSMYIKSIEASFVNQLYDSKQMRTSFPCKGTSCDPATTSGQFKVLRGGCWQKINFERVNPQTSRINHCHDLTENPWIQHYRSSSKQRSTVAPSLQESVSTSSKVADLGQRKGIPSGSGHLHLCESRVCHKDMLSSDTEMSGQNFVDDEVKGKKQNKKSKVKRQRSL-TDAKDNDQGAK 267 M NNFR+ RT E+T +S P QGIRE ESTMA EWTDEKHSMYIKSIEASFVNQLYDSKQM+TS+ DPATTSGQFKVLRGGCWQKINFERVNPQTSRIN CHDLTENPWIQHYRSSSKQRS SLQESV+T+SKV DLGQRKG+PSGSGHLHLCESRVCHKDML SDTEMS QNFVD+EVKGKKQNKKSKVKRQRSL +DA+DNDQG K Sbjct: 1 MKNNFRLIRT-EKTRISS-----PTQGIRETESTMAPEWTDEKHSMYIKSIEASFVNQLYDSKQMKTSY-------DPATTSGQFKVLRGGCWQKINFERVNPQTSRINQCHDLTENPWIQHYRSSSKQRSIAVSSLQESVTTTSKVVDLGQRKGVPSGSGHLHLCESRVCHKDMLYSDTEMSDQNFVDEEVKGKKQNKKSKVKRQRSLISDAQDNDQGTK 208 The following BLAST results are available for this feature:
BLAST of rna-XM_022782546.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot) Total hits: 1
BLAST of rna-XM_022782546.1 vs. Araport11
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11) Total hits: 3
BLAST of rna-XM_022782546.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0
Date Performed: 2023-06-20
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-XM_022782546.1_VrVC1973A-SNU_v1 ID=rna-XM_022782546.1_VrVC1973A-SNU_v1; Name=rna-XM_022782546.1; organism=Vigna radiata; type=mRNA; length=804bpback to top protein sequence of rna-XM_022782546.1_VrVC1973A-SNU_v1 >rna-XM_022782546.1_VrVC1973A-SNU_v1 ID=rna-XM_022782546.1_VrVC1973A-SNU_v1; Name=rna-XM_022782546.1_VrVC1973A-SNU_v1; organism=Vigna radiata; type=polypeptide; length=267bpback to top mRNA from alignment at chr06:35230213..35234244+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>rna-XM_022782546.1_VrVC1973A-SNU_v1 ID=rna-XM_022782546.1_VrVC1973A-SNU_v1; Name=rna-XM_022782546.1; organism=Vigna radiata; type=mRNA; length=4032bp; location=Sequence derived from: chr06:35230213..35234244+ (Vigna radiataback to top Coding sequence (CDS) from alignment at chr06:35230213..35234244+ >rna-XM_022782546.1_VrVC1973A-SNU_v1 ID=rna-XM_022782546.1_VrVC1973A-SNU_v1; Name=rna-XM_022782546.1; organism=Vigna radiata; type=CDS; length=804bp; location=Sequence derived from: chr06:35230213..35234244+ (Vigna radiataback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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