rna-XM_022783990.1

Transcript Overview


Name	rna-XM_022783990.1
Unique Name	rna-XM_022783990.1_VrVC1973A-SNU_v1
Type	mRNA
Organism	Vigna radiata (Mung bean, green gram)
Sequence length	975
Product	uncharacterized LOC106765373, transcript variant X5

References

External references for this mRNA


Database	Accession
GeneID	106765373
Genbank	XM_022783990.1

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
chr01	chromosome	chr01:8898909..8903666 +	Vigna radiata cv. VC1973A genome v6.0	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Vigna radiata cv. VC1973A genome v6.0	2023-06-13
InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0	2023-06-20
Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot	2023-06-20
Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11	2023-06-20
Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL	2023-06-20

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
asvrvL200	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
ccvrvL0079	Cajanus cajan Asha genome v1.0	Cajanus cajan
cavrvL709	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
crvrvL452	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
psvrvL014	Pisum sativum Cameor genome v1a	Pisum sativum
psvrvL032	Pisum sativum Cameor genome v1a	Pisum sativum
pvvrvL402	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
tifvrvL116	Vicia faba cv. Tiffany genome v1.0	Vicia faba
tifvrvL137	Vicia faba cv. Tiffany genome v1.0	Vicia faba
vfhvrvL122	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
vfhvrvL142	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
vrvvssR165	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
vrvvssR191	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
vrvvuR144	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
vrvvuaR132	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
vrvzwsR133	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
vrvzwsR144	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
avjvrvL004	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
carvrvL654		Cicer arietinum
ccavrvL624	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
vrvvumR169	Vigna umbellata FF25 genome v1.0	Vigna umbellata
vrvvvaR172	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
vrvvstR147	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
vasvrvL158	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
pvfvrvL359	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
vrvvunR140	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata

Orthologs


Gene/Transcript	Assembly	Species
rna-KK1_016201	Cajanus cajan Asha genome v1.0	Cajanus cajan
Va10G005980.2	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
jg44958.t1	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
Vigan.11G216500.01	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
Vigun04g040500.2	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
Vigun04g040500.2	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
Cr_12777.1	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
Vigst.11G114500.01	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
Vum_11G01411.1	Vigna umbellata FF25 genome v1.0	Vigna umbellata
Cc_v2.0_17801.1	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
Vfaba.Hedin2.R1.1g088000.1	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
XM_058923448.1	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
LR48_mrnaVigan10g045500	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
Ca_18033	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
evm.model.Chr04.335.1.6211316a	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
Vfaba.Tiffany.R1.1g063840.1	Vicia faba cv. Tiffany genome v1.0	Vicia faba
Psat01G0344000-T1	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
gene-LOC106765373	gene-LOC106765373_VrVC1973A-SNU_v1	Vigna radiata	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
exon-XM_022783990.1-1	exon-XM_022783990.1-1_VrVC1973A-SNU_v1	Vigna radiata	exon
exon-XM_022783990.1-2	exon-XM_022783990.1-2_VrVC1973A-SNU_v1	Vigna radiata	exon
exon-XM_022783990.1-3	exon-XM_022783990.1-3_VrVC1973A-SNU_v1	Vigna radiata	exon
exon-XM_022783990.1-4	exon-XM_022783990.1-4_VrVC1973A-SNU_v1	Vigna radiata	exon
exon-XM_022783990.1-5	exon-XM_022783990.1-5_VrVC1973A-SNU_v1	Vigna radiata	exon
exon-XM_022783990.1-6	exon-XM_022783990.1-6_VrVC1973A-SNU_v1	Vigna radiata	exon
exon-XM_022783990.1-7	exon-XM_022783990.1-7_VrVC1973A-SNU_v1	Vigna radiata	exon
exon-XM_022783990.1-8	exon-XM_022783990.1-8_VrVC1973A-SNU_v1	Vigna radiata	exon
exon-XM_022783990.1-9	exon-XM_022783990.1-9_VrVC1973A-SNU_v1	Vigna radiata	exon
exon-XM_022783990.1-10	exon-XM_022783990.1-10_VrVC1973A-SNU_v1	Vigna radiata	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
cds-XP_022639711.1	cds-XP_022639711.1_VrVC1973A-SNU_v1	Vigna radiata	CDS
cds-XP_022639711.1	cds-XP_022639711.1_VrVC1973A-SNU_v1_2	Vigna radiata	CDS
cds-XP_022639711.1	cds-XP_022639711.1_VrVC1973A-SNU_v1_3	Vigna radiata	CDS
cds-XP_022639711.1	cds-XP_022639711.1_VrVC1973A-SNU_v1_4	Vigna radiata	CDS
cds-XP_022639711.1	cds-XP_022639711.1_VrVC1973A-SNU_v1_5	Vigna radiata	CDS
cds-XP_022639711.1	cds-XP_022639711.1_VrVC1973A-SNU_v1_6	Vigna radiata	CDS
cds-XP_022639711.1	cds-XP_022639711.1_VrVC1973A-SNU_v1_7	Vigna radiata	CDS
cds-XP_022639711.1	cds-XP_022639711.1_VrVC1973A-SNU_v1_8	Vigna radiata	CDS
cds-XP_022639711.1	cds-XP_022639711.1_VrVC1973A-SNU_v1_9	Vigna radiata	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
rna-XM_022783990.1_VrVC1973A-SNU_v1	rna-XM_022783990.1_VrVC1973A-SNU_v1	Vigna radiata	polypeptide
rna-XM_022783990.1_VrVC1973A-SNU_v1	rna-XM_022783990.1_VrVC1973A-SNU_v1-protein	Vigna radiata	polypeptide

Homology

[Close]

BLAST of rna-XM_022783990.1 vs. Araport11
Match: AT1G53345.1 (| DHHA1 domain protein | Chr1:19902561-19903538 FORWARD LENGTH=325 | 201606)

HSP 1 Score: 338.961 bits (868), Expect = 4.102e-116
Identity = 180/333 (54.05%), Postives = 227/333 (68.17%), Query Frame = 0

Query:   15 ITMGLKKKGNDQCSPAVLYHYPCPDGAFAALAAHLYFKATSLFSPLFFTNTVYNPIRVQDLPLNEIGDLYLLDFVGPDGFIEEVSTKVQRVIILDHHKTALERLGNDDSLVKH-SSVLD-----------------------------EFERARQLFLYVEDGDLWRWRLQNSKAFSSGLKDLNIEFDARKNPSLFDQLLSLDSNTIISRGMLSLSLKQNLIDDCLIKSYEIALG-NGAFGHCLAVNADTTLSQLRSELGHQLAIKSKEMKLRGIGAVVYKVPELENDQLLKISLRSEKNEDTTPITQEFGGGGHRNAGSFMLTADKFEQWKL 316
            + +G+KK        AVLYHYPC DG FAALAAHLYF A S+ S LFF NTVY+PI +  LPL +I  LYL DF GP GF+ +VS KV  V+ILDHHKTA++ LG+     K+ +SVLD                             +F+R R++F Y+ED D+W+W L  SKAF+SG+ DL IE+D  KN SLFDQLLSLD  ++I+RG  SLS K  LI + L +SYEI LG +  FG CLAVNAD  +++LRSELG+QLA KSK + LRG+GAVVY+VPEL ++  LKISLRS   EDTTP++Q FGGGGH+NA SF+L + +FEQWK+
Sbjct:    1 MNLGVKKM-------AVLYHYPCHDGVFAALAAHLYFSAKSIPS-LFFPNTVYSPITINQLPLQDISHLYLFDFTGPPGFVHQVSPKVDNVVILDHHKTAIDSLGDVSLTCKNVTSVLDIERSGATIAFDYFTQKLVEESRGSCKEMNDFKRMRRVFEYIEDADIWKWELPESKAFNSGILDLKIEYDFNKNQSLFDQLLSLDHESVINRGKQSLSKKHKLIHEVLEQSYEIVLGGDEEFGRCLAVNADE-ITELRSELGNQLAEKSKNLSLRGVGAVVYRVPELGDENKLKISLRSVAEEDTTPVSQRFGGGGHKNASSFLLNSMEFEQWKV 324

[Close]

BLAST of rna-XM_022783990.1 vs. Araport11
Match: AT5G09580.1 (| heat shock protein | Chr5:2972639-2974438 FORWARD LENGTH=393 | 201606)

HSP 1 Score: 128.257 bits (321), Expect = 9.448e-34
Identity = 111/354 (31.36%), Postives = 170/354 (48.02%), Query Frame = 0

Query:    5 QAKLHNSSNAITMGLKKKGNDQCSPAVLYHYPCPDGAFAALAAHLY---FKATSLFSPLFFTNTVYNPIRVQDLPLNEIGDLYLLDFVGPDGFIEEVSTKVQRVIILDHHKTALERLG-------------------NDDSLVKHSSV-----------------LDEFERARQLFLYVEDGDLWRWRLQNSKAFSSGLKDLNIEFDARKNPSLFDQLLSLDSNTIISRGMLSLSLKQNLIDD----CLIKSYEIALGNGAFGHCLAVNADTTLSQLRSELGHQLAIKSKEMKLRGIGAVVYKVPELENDQLLKISLRS-EKNEDTTPITQEFGGGGHRNAGSFMLTADKFEQW 314
            +AK    S+A    +     ++    VLY+YP   GAF+AL AHLY    +   L  P  F++ +  P RV+DL L      YLLDFV P  F          ++  DH  +AL+R+G                   +  ++ K+ S                  +++  R   +  Y+ED DL RW L + KAFS GLKD     +   NP +++QLL + S  +I+ G    S    LID      L K+++I LG G +G CL + AD    QL  ELG  L+++S    LR IGAV +    ++ +  LK+ LRS +   +T+ + + +GGGG  ++ SF++  D++ QW
Sbjct:   50 EAKRSFRSDAALEAIANALEEKVPNLVLYNYPSFSGAFSALFAHLYHYRLRLPCLILP--FSSLI--PFRVEDLCLEGFERCYLLDFVVPKDF--ACQKTACEIVCFDHRNSALKRIGLIKEEHKKRLKIYVDTETSSSKAVYKYFSSKLTDQRSSEVEALSLLSVEDKTRVESVLDYIEDIDLRRWMLPDIKAFSFGLKDWRSRINCIINPYMYEQLLKISSADLIAYGNSYFS--SRLIDAKKLLKLNKAFKIRLGRGLYGECLGMRADGN-HQLSDELGKLLSLQSSAAGLRPIGAVTF----VQRNN-LKMCLRSTDAITNTSEVAKAYGGGGTSSSSSFIIRMDEYNQW 389

[Close]

BLAST of rna-XM_022783990.1 vs. Araport11
Match: AT5G09580.2 (| heat shock protein | Chr5:2972639-2974024 FORWARD LENGTH=312 | 201606)

HSP 1 Score: 100.523 bits (249), Expect = 3.540e-24
Identity = 82/271 (30.26%), Postives = 121/271 (44.65%), Query Frame = 0

Query:    5 QAKLHNSSNAITMGLKKKGNDQCSPAVLYHYPCPDGAFAALAAHLY---FKATSLFSPLFFTNTVYNPIRVQDLPLNEIGDLYLLDFVGPDGFIEEVSTKVQRVIILDHHKTALERLG-------------------NDDSLVKHSSV-----------------LDEFERARQLFLYVEDGDLWRWRLQNSKAFSSGLKDLNIEFDARKNPSLFDQLLSLDSNTIISRGMLSLSLKQNLIDD----CLIKSYEIALGNGAFGHCLAVNAD 232
            +AK    S+A    +     ++    VLY+YP   GAF+AL AHLY    +   L  P  F++ +  P RV+DL L      YLLDFV P  F          ++  DH  +AL+R+G                   +  ++ K+ S                  +++  R   +  Y+ED DL RW L + KAFS GLKD     +   NP +++QLL + S  +I+ G    S    LID      L K+++I LG G +G CL V  +
Sbjct:   50 EAKRSFRSDAALEAIANALEEKVPNLVLYNYPSFSGAFSALFAHLYHYRLRLPCLILP--FSSLI--PFRVEDLCLEGFERCYLLDFVVPKDF--ACQKTACEIVCFDHRNSALKRIGLIKEEHKKRLKIYVDTETSSSKAVYKYFSSKLTDQRSSEVEALSLLSVEDKTRVESVLDYIEDIDLRRWMLPDIKAFSFGLKDWRSRINCIINPYMYEQLLKISSADLIAYGNSYFS--SRLIDAKKLLKLNKAFKIRLGRGLYGECLMVTIN 312

[Close]

BLAST of rna-XM_022783990.1 vs. UniProtKB/TrEMBL
Match: tr|A0A3Q0F833|A0A3Q0F833_VIGRR (uncharacterized protein LOC106765373 isoform X3 OS=Vigna radiata var. radiata OX=3916 GN=LOC106765373 PE=4 SV=1)

HSP 1 Score: 671.389 bits (1731), Expect = 0.000e+0
Identity = 324/324 (100.00%), Postives = 324/324 (100.00%), Query Frame = 0

Query:    1 MMMSQAKLHNSSNAITMGLKKKGNDQCSPAVLYHYPCPDGAFAALAAHLYFKATSLFSPLFFTNTVYNPIRVQDLPLNEIGDLYLLDFVGPDGFIEEVSTKVQRVIILDHHKTALERLGNDDSLVKHSSVLDEFERARQLFLYVEDGDLWRWRLQNSKAFSSGLKDLNIEFDARKNPSLFDQLLSLDSNTIISRGMLSLSLKQNLIDDCLIKSYEIALGNGAFGHCLAVNADTTLSQLRSELGHQLAIKSKEMKLRGIGAVVYKVPELENDQLLKISLRSEKNEDTTPITQEFGGGGHRNAGSFMLTADKFEQWKLCIKNHDQG 324
            MMMSQAKLHNSSNAITMGLKKKGNDQCSPAVLYHYPCPDGAFAALAAHLYFKATSLFSPLFFTNTVYNPIRVQDLPLNEIGDLYLLDFVGPDGFIEEVSTKVQRVIILDHHKTALERLGNDDSLVKHSSVLDEFERARQLFLYVEDGDLWRWRLQNSKAFSSGLKDLNIEFDARKNPSLFDQLLSLDSNTIISRGMLSLSLKQNLIDDCLIKSYEIALGNGAFGHCLAVNADTTLSQLRSELGHQLAIKSKEMKLRGIGAVVYKVPELENDQLLKISLRSEKNEDTTPITQEFGGGGHRNAGSFMLTADKFEQWKLCIKNHDQG
Sbjct:    1 MMMSQAKLHNSSNAITMGLKKKGNDQCSPAVLYHYPCPDGAFAALAAHLYFKATSLFSPLFFTNTVYNPIRVQDLPLNEIGDLYLLDFVGPDGFIEEVSTKVQRVIILDHHKTALERLGNDDSLVKHSSVLDEFERARQLFLYVEDGDLWRWRLQNSKAFSSGLKDLNIEFDARKNPSLFDQLLSLDSNTIISRGMLSLSLKQNLIDDCLIKSYEIALGNGAFGHCLAVNADTTLSQLRSELGHQLAIKSKEMKLRGIGAVVYKVPELENDQLLKISLRSEKNEDTTPITQEFGGGGHRNAGSFMLTADKFEQWKLCIKNHDQG 324

[Close]

BLAST of rna-XM_022783990.1 vs. UniProtKB/TrEMBL
Match: tr|A0A3Q0F6Q7|A0A3Q0F6Q7_VIGRR (uncharacterized protein LOC106765373 isoform X1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106765373 PE=4 SV=1)

HSP 1 Score: 655.21 bits (1689), Expect = 0.000e+0
Identity = 324/356 (91.01%), Postives = 324/356 (91.01%), Query Frame = 0

Query:    1 MMMSQAKLHNSSNAITMGLKKKGNDQCSPAVLYHYPCPDGAFAALAAHLYFKATSLFSPLFFTNTVYNPIRVQDLPLNEIGDLYLLDFVGPDGFIEEVSTKVQRVIILDHHKTALERLGNDDSL--------------------------------VKHSSVLDEFERARQLFLYVEDGDLWRWRLQNSKAFSSGLKDLNIEFDARKNPSLFDQLLSLDSNTIISRGMLSLSLKQNLIDDCLIKSYEIALGNGAFGHCLAVNADTTLSQLRSELGHQLAIKSKEMKLRGIGAVVYKVPELENDQLLKISLRSEKNEDTTPITQEFGGGGHRNAGSFMLTADKFEQWKLCIKNHDQG 324
            MMMSQAKLHNSSNAITMGLKKKGNDQCSPAVLYHYPCPDGAFAALAAHLYFKATSLFSPLFFTNTVYNPIRVQDLPLNEIGDLYLLDFVGPDGFIEEVSTKVQRVIILDHHKTALERLGNDDSL                                VKHSSVLDEFERARQLFLYVEDGDLWRWRLQNSKAFSSGLKDLNIEFDARKNPSLFDQLLSLDSNTIISRGMLSLSLKQNLIDDCLIKSYEIALGNGAFGHCLAVNADTTLSQLRSELGHQLAIKSKEMKLRGIGAVVYKVPELENDQLLKISLRSEKNEDTTPITQEFGGGGHRNAGSFMLTADKFEQWKLCIKNHDQG
Sbjct:    1 MMMSQAKLHNSSNAITMGLKKKGNDQCSPAVLYHYPCPDGAFAALAAHLYFKATSLFSPLFFTNTVYNPIRVQDLPLNEIGDLYLLDFVGPDGFIEEVSTKVQRVIILDHHKTALERLGNDDSLGENVVKVIDMERSGATIAFDYFKDKLLSPDIAVKHSSVLDEFERARQLFLYVEDGDLWRWRLQNSKAFSSGLKDLNIEFDARKNPSLFDQLLSLDSNTIISRGMLSLSLKQNLIDDCLIKSYEIALGNGAFGHCLAVNADTTLSQLRSELGHQLAIKSKEMKLRGIGAVVYKVPELENDQLLKISLRSEKNEDTTPITQEFGGGGHRNAGSFMLTADKFEQWKLCIKNHDQG 356

[Close]

BLAST of rna-XM_022783990.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3UHN3|A0A1S3UHN3_VIGRR (uncharacterized protein LOC106765373 isoform X2 OS=Vigna radiata var. radiata OX=3916 GN=LOC106765373 PE=4 SV=1)

HSP 1 Score: 636.336 bits (1640), Expect = 0.000e+0
Identity = 315/348 (90.52%), Postives = 316/348 (90.80%), Query Frame = 0

Query:    1 MMMSQAKLHNSSNAITMGLKKKGNDQCSPAVLYHYPCPDGAFAALAAHLYFKATSLFSPLFFTNTVYNPIRVQDLPLNEIGDLYLLDFVGPDGFIEEVSTKVQRVIILDHHKTALERLGNDDSL--------------------------------VKHSSVLDEFERARQLFLYVEDGDLWRWRLQNSKAFSSGLKDLNIEFDARKNPSLFDQLLSLDSNTIISRGMLSLSLKQNLIDDCLIKSYEIALGNGAFGHCLAVNADTTLSQLRSELGHQLAIKSKEMKLRGIGAVVYKVPELENDQLLKISLRSEKNEDTTPITQEFGGGGHRNAGSFMLTADKFEQWKL 316
            MMMSQAKLHNSSNAITMGLKKKGNDQCSPAVLYHYPCPDGAFAALAAHLYFKATSLFSPLFFTNTVYNPIRVQDLPLNEIGDLYLLDFVGPDGFIEEVSTKVQRVIILDHHKTALERLGNDDSL                                VKHSSVLDEFERARQLFLYVEDGDLWRWRLQNSKAFSSGLKDLNIEFDARKNPSLFDQLLSLDSNTIISRGMLSLSLKQNLIDDCLIKSYEIALGNGAFGHCLAVNADTTLSQLRSELGHQLAIKSKEMKLRGIGAVVYKVPELENDQLLKISLRSEKNEDTTPITQEFGGGGHRNAGSFMLTADKFEQWK+
Sbjct:    1 MMMSQAKLHNSSNAITMGLKKKGNDQCSPAVLYHYPCPDGAFAALAAHLYFKATSLFSPLFFTNTVYNPIRVQDLPLNEIGDLYLLDFVGPDGFIEEVSTKVQRVIILDHHKTALERLGNDDSLGENVVKVIDMERSGATIAFDYFKDKLLSPDIAVKHSSVLDEFERARQLFLYVEDGDLWRWRLQNSKAFSSGLKDLNIEFDARKNPSLFDQLLSLDSNTIISRGMLSLSLKQNLIDDCLIKSYEIALGNGAFGHCLAVNADTTLSQLRSELGHQLAIKSKEMKLRGIGAVVYKVPELENDQLLKISLRSEKNEDTTPITQEFGGGGHRNAGSFMLTADKFEQWKV 348

[Close]

BLAST of rna-XM_022783990.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3TBT3|A0A0S3TBT3_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.11G216500 PE=4 SV=1)

HSP 1 Score: 635.18 bits (1637), Expect = 0.000e+0
Identity = 314/354 (88.70%), Postives = 316/354 (89.27%), Query Frame = 0

Query:    1 MMMSQAKLHNSSNAITMGLKKKGNDQCSPAVLYHYPCPDGAFAALAAHLYFKATSLFSPLFFTNTVYNPIRVQDLPLNEIGDLYLLDFVGPDGFIEEVSTKVQRVIILDHHKTALERLGNDDSL--------------------------------VKHSSVLDEFERARQLFLYVEDGDLWRWRLQNSKAFSSGLKDLNIEFDARKNPSLFDQLLSLDSNTIISRGMLSLSLKQNLIDDCLIKSYEIALGNGAFGHCLAVNADTTLSQLRSELGHQLAIKSKEMKLRGIGAVVYKVPELENDQLLKISLRSEKNEDTTPITQEFGGGGHRNAGSFMLTADKFEQWKLCIKNHD 322
            MMMSQ KLHN SNAITMGLKKK NDQCSPAVLYHYPCPDGAFAALAAHLYFKATSLFSPLFFTNTVYNPIRVQDLPLNEIGDLYLLDFVGPDGFIEEVSTKVQRVI+LDHHKTALERLGNDDSL                                VKHSSVLDEFERARQLFLYVEDGDLWRWRLQNSKAFSSGLKDLNIEFDARKNPSLFDQLLSLDSNTIISRGMLSLSLKQ LIDDCL KSYEIALGNGAFGHCLAVNADTTLSQLRSELGHQLAIKSKEMKLRGIGAVVYKVPELENDQLLKISLRSEKNEDTTPITQEFGGGGHRNAGSFMLTADKFEQWK CIKNH+
Sbjct:    1 MMMSQPKLHNISNAITMGLKKKANDQCSPAVLYHYPCPDGAFAALAAHLYFKATSLFSPLFFTNTVYNPIRVQDLPLNEIGDLYLLDFVGPDGFIEEVSTKVQRVIVLDHHKTALERLGNDDSLGENVVKVIDMERSGATIAFDYFKDKLLSPDIAVKHSSVLDEFERARQLFLYVEDGDLWRWRLQNSKAFSSGLKDLNIEFDARKNPSLFDQLLSLDSNTIISRGMLSLSLKQKLIDDCLSKSYEIALGNGAFGHCLAVNADTTLSQLRSELGHQLAIKSKEMKLRGIGAVVYKVPELENDQLLKISLRSEKNEDTTPITQEFGGGGHRNAGSFMLTADKFEQWKFCIKNHN 354

[Close]

BLAST of rna-XM_022783990.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9VHW3|A0A0L9VHW3_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan10g045500 PE=4 SV=1)

HSP 1 Score: 624.009 bits (1608), Expect = 0.000e+0
Identity = 309/348 (88.79%), Postives = 311/348 (89.37%), Query Frame = 0

Query:    1 MMMSQAKLHNSSNAITMGLKKKGNDQCSPAVLYHYPCPDGAFAALAAHLYFKATSLFSPLFFTNTVYNPIRVQDLPLNEIGDLYLLDFVGPDGFIEEVSTKVQRVIILDHHKTALERLGNDDSL--------------------------------VKHSSVLDEFERARQLFLYVEDGDLWRWRLQNSKAFSSGLKDLNIEFDARKNPSLFDQLLSLDSNTIISRGMLSLSLKQNLIDDCLIKSYEIALGNGAFGHCLAVNADTTLSQLRSELGHQLAIKSKEMKLRGIGAVVYKVPELENDQLLKISLRSEKNEDTTPITQEFGGGGHRNAGSFMLTADKFEQWKL 316
            MMMSQ KLHN SNAITMGLKKK NDQCSPAVLYHYPCPDGAFAALAAHLYFKATSLFSPLFFTNTVYNPIRVQDLPLNEIGDLYLLDFVGPDGFIEEVSTKVQRVI+LDHHKTALERLGNDDSL                                VKHSSVLDEFERARQLFLYVEDGDLWRWRLQNSKAFSSGLKDLNIEFDARKNPSLFDQLLSLDSNTIISRGMLSLSLKQ LIDDCL KSYEIALGNGAFGHCLAVNADTTLSQLRSELGHQLAIKSKEMKLRGIGAVVYKVPELENDQLLKISLRSEKNEDTTPITQEFGGGGHRNAGSFMLTADKFEQWK+
Sbjct:    1 MMMSQPKLHNISNAITMGLKKKANDQCSPAVLYHYPCPDGAFAALAAHLYFKATSLFSPLFFTNTVYNPIRVQDLPLNEIGDLYLLDFVGPDGFIEEVSTKVQRVIVLDHHKTALERLGNDDSLGENVVKVIDMERSGATIAFDYFKDKLLSPDIAVKHSSVLDEFERARQLFLYVEDGDLWRWRLQNSKAFSSGLKDLNIEFDARKNPSLFDQLLSLDSNTIISRGMLSLSLKQKLIDDCLSKSYEIALGNGAFGHCLAVNADTTLSQLRSELGHQLAIKSKEMKLRGIGAVVYKVPELENDQLLKISLRSEKNEDTTPITQEFGGGGHRNAGSFMLTADKFEQWKV 348

[Close]

BLAST of rna-XM_022783990.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6LWN3|A0A4D6LWN3_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG5g468 PE=4 SV=1)

HSP 1 Score: 562.762 bits (1449), Expect = 0.000e+0
Identity = 283/349 (81.09%), Postives = 292/349 (83.67%), Query Frame = 0

Query:    1 MMMSQAKLHNSSNAITMGLKKKGNDQ-CSPAVLYHYPCPDGAFAALAAHLYFKATSLFSPLFFTNTVYNPIRVQDLPLNEIGDLYLLDFVGPDGFIEEVSTKVQRVIILDHHKTALERLGNDDSL--------------------------------VKHSSVLDEFERARQLFLYVEDGDLWRWRLQNSKAFSSGLKDLNIEFDARKNPSLFDQLLSLDSNTIISRGMLSLSLKQNLIDDCLIKSYEIALGNGAFGHCLAVNADTTLSQLRSELGHQLAIKSKEMKLRGIGAVVYKVPELENDQLLKISLRSEKNEDTTPITQEFGGGGHRNAGSFMLTADKFEQWKL 316
            M+MSQAKLHN SNAI MGLKK  N   CS AVLYHYPCPDGAFAALAAHLYFKATS FSPLFF NTVYNPIR +DLPL+EI DLYLLDFVGPDGFIEE+STKV RVI+LDHHKTALERLG +DSL                                 KHS VLDEFERARQLFLYVED DLWRWRLQNSKAFSSGLKDLNIEFDARKNPSLFDQLLSLD N IISRGM SLSLKQ LIDDCL KSYEIALGNGAFGHCLAVNAD+TLS LRSELGHQLA KSKEMKLRGIGAVVYKVPELENDQLLKISLRSE+ EDTTPITQEFGGGGHRNAGSFMLTADKFEQWK+
Sbjct:    1 MLMSQAKLHNISNAIKMGLKKNDNHHHCSAAVLYHYPCPDGAFAALAAHLYFKATSSFSPLFFPNTVYNPIRAEDLPLDEIDDLYLLDFVGPDGFIEEISTKVPRVIVLDHHKTALERLGKEDSLGENVVKVLDMERSGATIAFDYFKDKLLSPDIAAKHSPVLDEFERARQLFLYVEDVDLWRWRLQNSKAFSSGLKDLNIEFDARKNPSLFDQLLSLDLNAIISRGMQSLSLKQKLIDDCLSKSYEIALGNGAFGHCLAVNADSTLSLLRSELGHQLATKSKEMKLRGIGAVVYKVPELENDQLLKISLRSEEKEDTTPITQEFGGGGHRNAGSFMLTADKFEQWKV 349

[Close]

BLAST of rna-XM_022783990.1 vs. UniProtKB/TrEMBL
Match: tr|V7C339|V7C339_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_004G143000g PE=4 SV=1)

HSP 1 Score: 558.14 bits (1437), Expect = 0.000e+0
Identity = 278/350 (79.43%), Postives = 295/350 (84.29%), Query Frame = 0

Query:    1 MMMSQAKLHNSSNAITMGLKKKGND--QCSPAVLYHYPCPDGAFAALAAHLYFKATSLFSPLFFTNTVYNPIRVQDLPLNEIGDLYLLDFVGPDGFIEEVSTKVQRVIILDHHKTALERLGNDDSL--------------------------------VKHSSVLDEFERARQLFLYVEDGDLWRWRLQNSKAFSSGLKDLNIEFDARKNPSLFDQLLSLDSNTIISRGMLSLSLKQNLIDDCLIKSYEIALGNGAFGHCLAVNADTTLSQLRSELGHQLAIKSKEMKLRGIGAVVYKVPELENDQLLKISLRSEKNEDTTPITQEFGGGGHRNAGSFMLTADKFEQWKL 316
            M++SQAKLHN SNAI MG KK+ N+    SPA+LYHYPCPDGAFAALAAHLYFKATSLFSPLFF NTVY P+  +DLPLNEIGDLYLLDFVGPDGFI+E+STKV RVI+LDHHKTALE+LGN+ SL                                VKH SVLDEFE ARQLFLYVEDGDLWRWRLQNSKAFSSGLKDLNIEFDARKNPSLFDQLLSL+ NTIISRGMLS+SLKQ LIDD L KSYEIALGNGAFG CLAVNADTTLSQLRSELGHQLA KSKEMKLRGIGAVVYKVPELENDQLLKISLRS ++EDTTPITQEFGGGGHRNAGSFMLTADKFEQWK+
Sbjct:    1 MLLSQAKLHNISNAINMGSKKRSNNINHASPAILYHYPCPDGAFAALAAHLYFKATSLFSPLFFPNTVYKPLSAEDLPLNEIGDLYLLDFVGPDGFIQEISTKVSRVIVLDHHKTALEKLGNEVSLGENVVKVIDMERSGATIAFDYFKDKLLSPDIAVKHPSVLDEFELARQLFLYVEDGDLWRWRLQNSKAFSSGLKDLNIEFDARKNPSLFDQLLSLNLNTIISRGMLSISLKQKLIDDGLSKSYEIALGNGAFGRCLAVNADTTLSQLRSELGHQLATKSKEMKLRGIGAVVYKVPELENDQLLKISLRSVESEDTTPITQEFGGGGHRNAGSFMLTADKFEQWKV 350

[Close]

BLAST of rna-XM_022783990.1 vs. UniProtKB/TrEMBL
Match: tr|V7C363|V7C363_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_004G143200g PE=4 SV=1)

HSP 1 Score: 547.354 bits (1409), Expect = 0.000e+0
Identity = 274/350 (78.29%), Postives = 291/350 (83.14%), Query Frame = 0

Query:    1 MMMSQAKLHNSSNAITMGLKKKGND--QCSPAVLYHYPCPDGAFAALAAHLYFKATSLFSPLFFTNTVYNPIRVQDLPLNEIGDLYLLDFVGPDGFIEEVSTKVQRVIILDHHKTALERLGNDDSL--------------------------------VKHSSVLDEFERARQLFLYVEDGDLWRWRLQNSKAFSSGLKDLNIEFDARKNPSLFDQLLSLDSNTIISRGMLSLSLKQNLIDDCLIKSYEIALGNGAFGHCLAVNADTTLSQLRSELGHQLAIKSKEMKLRGIGAVVYKVPELENDQLLKISLRSEKNEDTTPITQEFGGGGHRNAGSFMLTADKFEQWKL 316
            M++SQAKL N SNAI MG KK+ N+    SPA+LYHYPCPDGAFAALAAHLYFKATSLFSPLFF NTV  P+  +DLPLNEIGDLYLLDFVGPDGFI+E+STKV RVI+LDHHKTALE+LGN+ SL                                VKH SVLDEFE ARQLFLYVEDGDLWRWRLQNSKAFSSGLKDLNIEFDARKNPSLFDQLLSL+ NTIISRGMLS+SLKQ LIDD L KSYEIALGNGAFG CLAVNADTTLSQLRSELGHQLA KSKEMKLRGIGAVVY VPELEND+LLKISLRS +NEDTTPITQEFGGGGHRNAGSF LTADKFEQWK+
Sbjct:    1 MLLSQAKLQNMSNAINMGSKKRSNNNNHASPAILYHYPCPDGAFAALAAHLYFKATSLFSPLFFPNTVCKPLSAEDLPLNEIGDLYLLDFVGPDGFIQEISTKVSRVIVLDHHKTALEKLGNEVSLGENVVKVIDMERSGATIAFDYFKDKLLSSDIEVKHPSVLDEFELARQLFLYVEDGDLWRWRLQNSKAFSSGLKDLNIEFDARKNPSLFDQLLSLNLNTIISRGMLSISLKQKLIDDGLSKSYEIALGNGAFGRCLAVNADTTLSQLRSELGHQLATKSKEMKLRGIGAVVYNVPELENDELLKISLRSVENEDTTPITQEFGGGGHRNAGSFKLTADKFEQWKV 350

[Close]

BLAST of rna-XM_022783990.1 vs. UniProtKB/TrEMBL
Match: tr|A0A3Q0F763|A0A3Q0F763_VIGRR (uncharacterized protein LOC106765373 isoform X4 OS=Vigna radiata var. radiata OX=3916 GN=LOC106765373 PE=4 SV=1)

HSP 1 Score: 537.724 bits (1384), Expect = 0.000e+0
Identity = 275/356 (77.25%), Postives = 277/356 (77.81%), Query Frame = 0

Query:    1 MMMSQAKLHNSSNAITMGLKKKGNDQCSPAVLYHYPCPDGAFAALAAHLYFKATSLFSPLFFTNTVYNPIRVQDLPLNEIGDLYLLDFVGPDGFIEEVSTKVQRVIILDHHKTALERLGNDDSL--------------------------------VKHSSVLDEFERARQLFLYVEDGDLWRWRLQNSKAFSSGLKDLNIEFDARKNPSLFDQLLSLDSNTIISRGMLSLSLKQNLIDDCLIKSYEIALGNGAFGHCLAVNADTTLSQLRSELGHQLAIKSKEMKLRGIGAVVYKVPELENDQLLKISLRSEKNEDTTPITQEFGGGGHRNAGSFMLTADKFEQWKLCIKNHDQG 324
            MMMSQAKLHNSSNAITMGLKKKGNDQCSPAVLYHYPCPDGAFAALAAHLYFKATSLFSPLFFTNTVYNPIRVQDLPLNEIGDLYLLDFVGPDGFIEEVSTKVQRVIILDHHKTALERLGNDDSL                                VKHSSVLDEFERARQLFLYVEDGDLWRWRLQNSKAFSSGLKDLNIEFDARKNPSLFDQ ++ D                                             TTLSQLRSELGHQLAIKSKEMKLRGIGAVVYKVPELENDQLLKISLRSEKNEDTTPITQEFGGGGHRNAGSFMLTADKFEQWKLCIKNHDQG
Sbjct:    1 MMMSQAKLHNSSNAITMGLKKKGNDQCSPAVLYHYPCPDGAFAALAAHLYFKATSLFSPLFFTNTVYNPIRVQDLPLNEIGDLYLLDFVGPDGFIEEVSTKVQRVIILDHHKTALERLGNDDSLGENVVKVIDMERSGATIAFDYFKDKLLSPDIAVKHSSVLDEFERARQLFLYVEDGDLWRWRLQNSKAFSSGLKDLNIEFDARKNPSLFDQAVNAD---------------------------------------------TTLSQLRSELGHQLAIKSKEMKLRGIGAVVYKVPELENDQLLKISLRSEKNEDTTPITQEFGGGGHRNAGSFMLTADKFEQWKLCIKNHDQG 311

[Close]

BLAST of rna-XM_022783990.1 vs. UniProtKB/TrEMBL
Match: tr|A0A151T3S0|A0A151T3S0_CAJCA (Uncharacterized protein R106 family OS=Cajanus cajan OX=3821 GN=KK1_016201 PE=4 SV=1)

HSP 1 Score: 521.546 bits (1342), Expect = 0.000e+0
Identity = 261/354 (73.73%), Postives = 289/354 (81.64%), Query Frame = 0

Query:    1 MMMSQAKLHNSSNAIT----MGLKKKGND--QCSPAVLYHYPCPDGAFAALAAHLYFKATSLFSPLFFTNTVYNPIRVQDLPLNEIGDLYLLDFVGPDGFIEEVSTKVQRVIILDHHKTALERLGND--------------------------------DSLVKHSSVLDEFERARQLFLYVEDGDLWRWRLQNSKAFSSGLKDLNIEFDARKNPSLFDQLLSLDSNTIISRGMLSLSLKQNLIDDCLIKSYEIALGNGAFGHCLAVNADTTLSQLRSELGHQLAIKSKEMKLRGIGAVVYKVPELENDQLLKISLRSEKNEDTTPITQEFGGGGHRNAGSFMLTADKFEQWKL 316
            M++SQAKLHN++N       M +KKKGN+   CSPA+LYHYPCPDGAFAALAAHLYFKATSLFSPLFF NTV+ P+  +DLPLNEI DLYLLDFVGPDGF++E+STKV RVI+LDHHK+ALERLGN+                                D++VKH SVLDEF+R RQLF Y+EDGDLWRWRLQNSKAFSSGLKDLNIEFDARKN SLFDQLLSLD +TIIS+G+LSLS KQ LIDDCL KSYEIALGNG FGHCLAVNAD TLSQLRSELGHQLA KS++MKLRGIGAVVYKVPELENDQ LKISLRS  + DTTPITQEFGGGGHRNAGSFML AD+FEQWK+
Sbjct:   14 MLLSQAKLHNNNNISNAIINMSMKKKGNNSNNCSPAILYHYPCPDGAFAALAAHLYFKATSLFSPLFFPNTVFKPLSAEDLPLNEIDDLYLLDFVGPDGFVQEISTKVPRVIVLDHHKSALERLGNEASLGENVVKVIDMERSGATIAFDYFKDKLLSPDAVVKHPSVLDEFDRVRQLFQYIEDGDLWRWRLQNSKAFSSGLKDLNIEFDARKNASLFDQLLSLDLDTIISKGILSLSHKQKLIDDCLSKSYEIALGNGVFGHCLAVNADITLSQLRSELGHQLATKSQKMKLRGIGAVVYKVPELENDQRLKISLRSVDSIDTTPITQEFGGGGHRNAGSFMLMADEFEQWKV 367

The following BLAST results are available for this feature:

BLAST of rna-XM_022783990.1 vs.
BLAST of rna-XM_022783990.1 vs. Araport11
BLAST of rna-XM_022783990.1 vs. UniProtKB/TrEMBL

BLAST of rna-XM_022783990.1 vs.
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of rna-XM_022783990.1 vs. Araport11
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11)
Total hits: 3


Match Name	E-value	Identity	Description
AT1G53345.1	4.102e-116	54.05	\| DHHA1 domain protein \| Chr1:19902561-19903538 FO...	[more]
AT5G09580.1	9.448e-34	31.36	\| heat shock protein \| Chr5:2972639-2974438 FORWAR...	[more]
AT5G09580.2	3.540e-24	30.26	\| heat shock protein \| Chr5:2972639-2974024 FORWAR...	[more]

BLAST of rna-XM_022783990.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
tr\|A0A3Q0F833\|A0A3Q0F833_VIGRR	0.000e+0	100.00	uncharacterized protein LOC106765373 isoform X3 OS...	[more]
tr\|A0A3Q0F6Q7\|A0A3Q0F6Q7_VIGRR	0.000e+0	91.01	uncharacterized protein LOC106765373 isoform X1 OS...	[more]
tr\|A0A1S3UHN3\|A0A1S3UHN3_VIGRR	0.000e+0	90.52	uncharacterized protein LOC106765373 isoform X2 OS...	[more]
tr\|A0A0S3TBT3\|A0A0S3TBT3_PHAAN	0.000e+0	88.70	Uncharacterized protein OS=Vigna angularis var. an...	[more]
tr\|A0A0L9VHW3\|A0A0L9VHW3_PHAAN	0.000e+0	88.79	Uncharacterized protein OS=Phaseolus angularis OX=...	[more]
tr\|A0A4D6LWN3\|A0A4D6LWN3_VIGUN	0.000e+0	81.09	Uncharacterized protein OS=Vigna unguiculata OX=39...	[more]
tr\|V7C339\|V7C339_PHAVU	0.000e+0	79.43	Uncharacterized protein OS=Phaseolus vulgaris OX=3...	[more]
tr\|V7C363\|V7C363_PHAVU	0.000e+0	78.29	Uncharacterized protein OS=Phaseolus vulgaris OX=3...	[more]
tr\|A0A3Q0F763\|A0A3Q0F763_VIGRR	0.000e+0	77.25	uncharacterized protein LOC106765373 isoform X4 OS...	[more]
tr\|A0A151T3S0\|A0A151T3S0_CAJCA	0.000e+0	73.73	Uncharacterized protein R106 family OS=Cajanus caj...	[more]

InterPro

Analysis Name: InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0
Date Performed: 2023-06-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.310.30		coord: 230..322 e-value: 4.4E-8 score: 34.9
None	No IPR available	PANTHER	PTHR46922	DHHA1 DOMAIN PROTEIN	coord: 132..316
IPR038763	DHH phosphoesterase superfamily	SUPERFAMILY	64182	DHH phosphoesterases	coord: 272..315

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr01:8898909..8903666+
coding sequence from alignment at chr01:8898909..8903666+

mRNA sequence

>rna-XM_022783990.1_VrVC1973A-SNU_v1 ID=rna-XM_022783990.1_VrVC1973A-SNU_v1; Name=rna-XM_022783990.1; organism=Vigna radiata; type=mRNA; length=975bp
ATGATGATGTCGCAAGCCAAACTGCACAACAGCTCCAATGCCATAACCAT
GGGTTTGAAGAAGAAGGGTAACGATCAGTGTTCACCTGCAGTACTCTACC
ACTACCCTTGTCCTGATGGTGCTTTTGCTGCTCTTGCTGCACACCTTTAC
TTCAAGGCCACTTCTTTATTCTCCCCTCTTTTCTTTACCAACACTGTTTA
CAACCCCATCAGGGTTCAAGATCTTCCTCTGAATGAAATTGGTGATCTTT
ACCTCCTGGATTTTGTGGGGCCGGATGGTTTTATTGAGGAAGTCTCTACC
AAAGTTCAAAGGGTGATTATTTTGGACCATCACAAGACTGCCCTTGAGAG
GTTGGGGAACGACGATTCACTTGTAAAGCACTCCTCGGTGCTTGATGAAT
TTGAGCGTGCCAGGCAACTTTTTCTGTATGTTGAAGATGGGGACCTCTGG
AGGTGGAGACTCCAGAACAGCAAAGCTTTCAGCAGTGGTTTGAAGGATTT
GAACATTGAATTTGATGCTAGGAAAAATCCTTCCTTGTTTGACCAGTTGC
TTTCACTAGACTCGAATACTATCATTAGTAGAGGTATGCTAAGCTTATCA
CTGAAGCAAAATTTAATTGATGATTGTCTCATCAAGTCATATGAAATTGC
CCTCGGGAATGGTGCATTTGGTCATTGCCTGGCTGTCAATGCAGACACTA
CTCTTTCACAGTTAAGAAGTGAATTGGGACATCAATTAGCTATTAAAAGC
AAGGAAATGAAGTTGAGAGGTATTGGTGCAGTGGTGTATAAAGTACCAGA
GCTTGAAAATGACCAACTGCTAAAAATCAGTCTGAGGAGTGAGAAGAATG
AAGATACAACACCTATCACTCAGGAATTTGGAGGTGGTGGGCATCGAAAT
GCAGGTTCTTTCATGTTAACAGCTGATAAGTTTGAACAATGGAAGTTGTG
TATAAAGAACCATGACCAAGGATAA

protein sequence of rna-XM_022783990.1_VrVC1973A-SNU_v1

>rna-XM_022783990.1_VrVC1973A-SNU_v1 ID=rna-XM_022783990.1_VrVC1973A-SNU_v1; Name=rna-XM_022783990.1_VrVC1973A-SNU_v1; organism=Vigna radiata; type=polypeptide; length=324bp
MMMSQAKLHNSSNAITMGLKKKGNDQCSPAVLYHYPCPDGAFAALAAHLY
FKATSLFSPLFFTNTVYNPIRVQDLPLNEIGDLYLLDFVGPDGFIEEVST
KVQRVIILDHHKTALERLGNDDSLVKHSSVLDEFERARQLFLYVEDGDLW
RWRLQNSKAFSSGLKDLNIEFDARKNPSLFDQLLSLDSNTIISRGMLSLS
LKQNLIDDCLIKSYEIALGNGAFGHCLAVNADTTLSQLRSELGHQLAIKS
KEMKLRGIGAVVYKVPELENDQLLKISLRSEKNEDTTPITQEFGGGGHRN
AGSFMLTADKFEQWKLCIKNHDQG

mRNA from alignment at chr01:8898909..8903666+

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>rna-XM_022783990.1_VrVC1973A-SNU_v1 ID=rna-XM_022783990.1_VrVC1973A-SNU_v1; Name=rna-XM_022783990.1; organism=Vigna radiata; type=mRNA; length=4758bp; location=Sequence derived from: chr01:8898909..8903666+ (Vigna radiata
ttttatcaaacactttccAAAATCTAAGTTAAACAACAGCCATCATTGGA
TAATAACTGCTTCTTGTGCGGTTAAAAATCTCAAACTGTGCCAGCTTGCC
CTGACTCAAAAGACATGATTCAATGATGTTACATTAGCAGAACAGAACTT
GCACAATGATGATGTCGCAAGCCAAACTGCACAACAGCTCCAATGCCATA
ACCATGGGTTTGAAGAAGAAGGGTAACGATCAGTGTTCACCTGCAGTACT
CTACCACTACCCTTGTCCTGATGGTGCTTTTGCTGCTCTTGCTGCACACC
TTTACTTCAAGGCCACTTCTTTATTCTCCCCTCTTTTCTTTACCAACACT
GTTTACAACCCCATCAGGTTTTTGCCTCATTCAGCAGTATCAGTATTTGT
ACCATTCATTCTGCTATCAATCGTTGTTCTGCCATGTATGATATTGCTAT
TCCTTTTGATTTATGTGCATGTATTTTTTTGTCTTGATTGAAATATTCAG
GGTTCAAGATCTTCCTCTGAATGAAATTGGTGATCTTTACCTCCTGGATT
TTGTGGGGCCGGATGGTTTTATTGAGGAAGTCTCTACCAAAGTTCAAAGG
TTCTTTtgctttgtttgctgtttttcttgtaaaagatgcagtttttacat
tttttgtatttttgtccGTAGAATAGGTTCGAGTTATCTTTGTAGGGTGA
TTATTTTGGACCATCACAAGACTGCCCTTGAGTTTTACGATTGAGTTTTT
TCTTGGGATGTAGGGTGATTATTTTGGACCATCACAAGACTGCCCTTGAG
AGGTTGGGGAACGACGATTCACTTGGTGAGAATGTGGTTAAGGTTATTGA
CATGGAGAGGAGTGGGGCTACTATTGCATTTGATTACTTCAAAGATAAGC
TTTTGAGTCCTGATATTGCAGTAAAGCACTCCTCGGTGCTTGATGAATTT
GAGCGTGCCAGGCAACTTTTTCTGTATGTTGAAGATGGGGACCTCTGGAG
GTGGAGACTCCAGAACAGCAAAGCTTTCAGCAGTGGTTTGAAGGATTTGA
ACATTGAATTTGATGCTAGGAAAAATCCTTCCTTGTTTGACCAGGTAATC
TGATTTCCGAGTCTTGTATTGTTTTCTAAACTTTTCTGGTTTATCATTAG
AACCTGATTGGAATACACGGACAATGTAAGACTTTGTATATTTGAGTCTG
TGTTCTCTAATTTGAACAAGCACATTGAGGAGTTGCTATGTGCATGAAGA
TGTTTTTTTACTCCTTTGTTTTGTCCTGTAAATTTGCCCATGAGATCATT
GTGGTGATTTTACGTTATTCTGCTTAATTTTCCCTGCCTCATTAAGAGTG
ATGGTTCTTTGTTTTCGTATTTATATGTTGCCACCAAGATAGAGTGATAA
GTCATTTGTATAAATAGTTGAAATAACTGACAATTTTGTATATTATGGCA
GTTGCTTTCACTAGACTCGAATACTATCATTAGTAGAGGTATGCTAAGCT
TATCACTGAAGcaaaatttaattgatgattGTCTCATCAAGTCATATGAA
ATTGCCCTCGGGAATGGTGCATTTGGTCATTGCCTGGTGATGTTTCCTTC
TTTTGAGATCTCACTATTTATTCCTCTACTTCCACTCTATTCCTTGGTTT
TGCAGTCAAATTTCTTTAAACCATCCATCTGCAGTTTTTGGTTATTAATG
AATTGATGCtaatttttaatacttatattGAGCCCTAGTTGTGTTTTTCA
CACCTCTCTTGATTAGGAGAGAACTAATGAGAATCTTGCTATTTTCAacc
atttatattttgtagGCTGTCAATGCAGACACTACTCTTTCACAGTTAAG
AAGTGAATTGGGACATCAATTAGCTATTAAAAGCAAGGAAATGAAGTTGa
ggtttgttcattttaatttctttttactattaattaaatCATACTGATGT
TCTTCTCCCTTCTACTCATTCAAAAATCTCTTAGTGATACGTGTTGAGAA
GTCCCACATCTCAATACAAATggttttaagataaaatttggCATGGTATC
AAAGTTATAACTCGTCTCGGTAACTACATATACTAGTAGATTTCCCTGGT
TTGGCGTGTACTTGAATTTAGGAATTAATGTATATGACAGCAAACTGATT
TTAAATATCTGCAACTCCCAAGTgatttgtttatctttatttcttaattt
ctataatttctGTATATTTCTATAACTTATCTTTCCTTCTTTACGGAGAC
AGAgctgattatatttgtaacaagtttagtacatataatttataagtatC
AACTTGAGCGAGAATGTTAGATATCttagattattagatattttattttt
atcttcagTTACTTAtgttactttgttattattttttatgtgtattttta
aacttaatccatattttctttattataaataaagtatccTGTATTTTCTA
TCAAGGGAGATTAATGCAATACATAGTTTTTTCACTgtattcaataatta
ttattggaCTGTAAAACTTGTCTTACATGTTAATGTATCTTGTGATCTTG
GACttatgtgtgtgtgcgtgtgtgtattTTATTGTATACCATCTTTTGAT
ACTCTTACACTCTAAATACATAGTTCTTTATACAATGTATATAGACGATT
AAACCATGAACTCATAACCACAATACAAAAAGAAAGAGGGTAATATAATA
TGGGTGTCCTTAATTATTGGAGAATCAGAACATAGTCAAGGAATTGATAT
CTGATCTTAGTTATgcacttatttttatttgtagagGTATTGGTGCAGTG
GTGTATAAAGTACCAGAGCTTGAAAATGACCAACTGCTAAAAATCAGTCT
GAGGAGTGAGAAGAATGAAGATACAACACCTATCACTCAGGTTTTCCTTT
TATCAAATTGCTAATTGCATCTTTTTTGCAAATCTTATTGGTTATACTCG
TAGTTAagatcttttttctcttctattagGAATTTGGAGGTGGTGGGCAT
CGAAATGCAGGTTCTTTCATGTTAACAGCTGATAAGTTTGAACAATGGAA
GGTGTGATTGGATTTTGCACTTGACATGAGGTGACAAAGGAGTTCTTATA
TGATGTTCTTTTGTATGCTGTTCACATTTGAAAGCCATGTGAAATGTTTT
CATAGTTTCATCAGTAACTGTATTATgcaaactatttatttattaggtaT
CAGTTagtttttcatctttctttagTCAATTCCTAAAATCTCTTCCTTTA
CTTGTTCTATTTTTGGAAGATTGCTGCTTTGATTGTGTTAAGACTTGGAC
TATGATAAGAATTAGGAATTGACCAAGAAATGTGAAGTGTAAATTAGAAT
TTGTAACTGCcagtaaaaaagattaaatggATTAGGCTAAAGTTCAAAAC
TTGttttactcatttttcttcagtcgattaaactttaaaagtcaatgaaa
atatgaaaaagataatatattcatatttctGTTGTGTTATTATTAGGCAC
tcttattcatttttcattctcaaTTTTCAAACTTTCCCTGTATAATAACC
TTTGATCAATGTTCTTTCAGCATTTTCTCTATTAATCAGAAGTAACTTCA
GTTACTGTCCTATAATCATGGCCTAATTTGTTTCAAGTACAATATTCTTA
TCAATTTATACAGAGAATGATTTGTTAAAATCAGcttgataaataatttt
caattctttttaagGATGGATATTTAGAACTTATAGAGGAGTAGACAATT
CAGATAGTACTTGCTGATTTAAAAGAGAATTTTACTGATAAAACTCAAAC
ATGATATTTCAGTTCATTCCATTAGTAAATTGGtgatttaaaacttgttt
tacATGTTTATACATCTTTGATCTTGCAATTGCATTAAACAAAAATCTAT
ATAAGAATTAGTTTAGATAAACATCTTCtcaagtttaagaaaaaaagatg
aaacaagtctgtttataaattaaatctaataTGGAAAGAATGATATAGAT
CAGTTTATTCACAAGTTAATATTTATGAggtagaattttattttattttt
tcttttcttagaagTAATTATGGATAATAAGAATATTCTGAGACTCTGAA
TATAAGAATATGTTCATacaatatttatagaaaatttaaacattaaactC
AACTATTCTGAGATGACTAAAGTCTCATAATTAgtgaaaaatcaaaatag
gaTACCAGTGACATCTTCACCAAGTCATATATTACAGCTTATTCTGTcat
agtttttcttcttttctctctttgaCAGCTTGTCTTTGctattcttattt
ttacttttagagATATTTGTGCAGTTGTGTATAAAGAACCATGACCAAGG
ATAAAAATAAGCATGAGGGATGTGGAGAATGAAGTTATCATGCCTATCTC
TCAGGTTGCTCCTTCATCAAAAATGCTAATTGAATCTTCTATGTGACTTT
TGTTAGATATACTTGTATCtgatatatttttctcatcCTAGGAGTTTGGA
GGTGGTAGACATTGAAATGCAAGCTTTTTCATGTTAATAGCTGATGAATT
TGAACGATGAAAGGTGTGATTGGATTTTTGCACTTGACATGGAGACATAA
AGGAGTTACAGTCACACATGATCTTGTTGCTCAAATTTCAAAGTTATGTG
GAATGTTTTGGTAGTTCTGTTAATTACTCTATTATGCAGTTCTTTTGACT
ATTAATTAGGTATCAATgagttttttttctaatgtaatTCAAAAGCAATG
TTTGAAAA

Coding sequence (CDS) from alignment at chr01:8898909..8903666+

>rna-XM_022783990.1_VrVC1973A-SNU_v1 ID=rna-XM_022783990.1_VrVC1973A-SNU_v1; Name=rna-XM_022783990.1; organism=Vigna radiata; type=CDS; length=975bp; location=Sequence derived from: chr01:8898909..8903666+ (Vigna radiata
ATGATGATGTCGCAAGCCAAACTGCACAACAGCTCCAATGCCATAACCAT
GGGTTTGAAGAAGAAGGGTAACGATCAGTGTTCACCTGCAGTACTCTACC
ACTACCCTTGTCCTGATGGTGCTTTTGCTGCTCTTGCTGCACACCTTTAC
TTCAAGGCCACTTCTTTATTCTCCCCTCTTTTCTTTACCAACACTGTTTA
CAACCCCATCAGGGTTCAAGATCTTCCTCTGAATGAAATTGGTGATCTTT
ACCTCCTGGATTTTGTGGGGCCGGATGGTTTTATTGAGGAAGTCTCTACC
AAAGTTCAAAGGGTGATTATTTTGGACCATCACAAGACTGCCCTTGAGAG
GTTGGGGAACGACGATTCACTTGTAAAGCACTCCTCGGTGCTTGATGAAT
TTGAGCGTGCCAGGCAACTTTTTCTGTATGTTGAAGATGGGGACCTCTGG
AGGTGGAGACTCCAGAACAGCAAAGCTTTCAGCAGTGGTTTGAAGGATTT
GAACATTGAATTTGATGCTAGGAAAAATCCTTCCTTGTTTGACCAGTTGC
TTTCACTAGACTCGAATACTATCATTAGTAGAGGTATGCTAAGCTTATCA
CTGAAGcaaaatttaattgatgattGTCTCATCAAGTCATATGAAATTGC
CCTCGGGAATGGTGCATTTGGTCATTGCCTGGCTGTCAATGCAGACACTA
CTCTTTCACAGTTAAGAAGTGAATTGGGACATCAATTAGCTATTAAAAGC
AAGGAAATGAAGTTGagagGTATTGGTGCAGTGGTGTATAAAGTACCAGA
GCTTGAAAATGACCAACTGCTAAAAATCAGTCTGAGGAGTGAGAAGAATG
AAGATACAACACCTATCACTCAGGAATTTGGAGGTGGTGGGCATCGAAAT
GCAGGTTCTTTCATGTTAACAGCTGATAAGTTTGAACAATGGAAGTTGTG
TATAAAGAACCATGACCAAGGATAA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR038763	DHH_sf

Search form

rna-XM_022783990.1