rna-XM_022785122.1

Transcript Overview


Name	rna-XM_022785122.1
Unique Name	rna-XM_022785122.1_VrVC1973A-SNU_v1
Type	mRNA
Organism	Vigna radiata (Mung bean, green gram)
Sequence length	1080
Product	outer envelope protein 80, chloroplastic

References

External references for this mRNA


Database	Accession
GeneID	106770399
Genbank	XM_022785122.1

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
chr08	chromosome	chr08:24263119..24266054 -	Vigna radiata cv. VC1973A genome v6.0	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Vigna radiata cv. VC1973A genome v6.0	2023-06-13
InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0	2023-06-20
Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot	2023-06-20
Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11	2023-06-20
Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL	2023-06-20

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
asvrvL369	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
anvrvL0542	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anvrvL1173	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
pvvrvL611	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
tifvrvL385	Vicia faba cv. Tiffany genome v1.0	Vicia faba
vfhvrvL400	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
vrvvuaR575	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
vrvvuaR586	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
canvrvL313	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
avjvrvL316	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
ccavrvL238	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
vrvvumR620	Vigna umbellata FF25 genome v1.0	Vigna umbellata
vrvvvaR727	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
vrvvstR673	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
vasvrvL583	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
pvfvrvL569	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
vrvvunR546	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata

Orthologs


Gene/Transcript	Assembly	Species
Va02G044510.1	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
XM_058890330.1	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
Cc_v2.0_03512.1	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
Vigst.08G190700.01	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
evm.model.Chr07.2503	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
PvulFLAVERTChr07.1249	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
Vum_08G01737.1	Vigna umbellata FF25 genome v1.0	Vigna umbellata
Phvul.007G195200.1	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
Vfaba.Tiffany.R1.3g050120.1	Vicia faba cv. Tiffany genome v1.0	Vicia faba

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
gene-LOC106770399	gene-LOC106770399_VrVC1973A-SNU_v1	Vigna radiata	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
rna-XM_022785122.1_VrVC1973A-SNU_v1	rna-XM_022785122.1_VrVC1973A-SNU_v1	Vigna radiata	polypeptide
rna-XM_022785122.1_VrVC1973A-SNU_v1	rna-XM_022785122.1_VrVC1973A-SNU_v1-protein	Vigna radiata	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
exon-XM_022785122.1-11	exon-XM_022785122.1-11_VrVC1973A-SNU_v1	Vigna radiata	exon
exon-XM_022785122.1-10	exon-XM_022785122.1-10_VrVC1973A-SNU_v1	Vigna radiata	exon
exon-XM_022785122.1-9	exon-XM_022785122.1-9_VrVC1973A-SNU_v1	Vigna radiata	exon
exon-XM_022785122.1-8	exon-XM_022785122.1-8_VrVC1973A-SNU_v1	Vigna radiata	exon
exon-XM_022785122.1-7	exon-XM_022785122.1-7_VrVC1973A-SNU_v1	Vigna radiata	exon
exon-XM_022785122.1-6	exon-XM_022785122.1-6_VrVC1973A-SNU_v1	Vigna radiata	exon
exon-XM_022785122.1-5	exon-XM_022785122.1-5_VrVC1973A-SNU_v1	Vigna radiata	exon
exon-XM_022785122.1-4	exon-XM_022785122.1-4_VrVC1973A-SNU_v1	Vigna radiata	exon
exon-XM_022785122.1-3	exon-XM_022785122.1-3_VrVC1973A-SNU_v1	Vigna radiata	exon
exon-XM_022785122.1-2	exon-XM_022785122.1-2_VrVC1973A-SNU_v1	Vigna radiata	exon
exon-XM_022785122.1-1	exon-XM_022785122.1-1_VrVC1973A-SNU_v1	Vigna radiata	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
cds-XP_022640843.1	cds-XP_022640843.1_VrVC1973A-SNU_v1_11	Vigna radiata	CDS
cds-XP_022640843.1	cds-XP_022640843.1_VrVC1973A-SNU_v1_10	Vigna radiata	CDS
cds-XP_022640843.1	cds-XP_022640843.1_VrVC1973A-SNU_v1_9	Vigna radiata	CDS
cds-XP_022640843.1	cds-XP_022640843.1_VrVC1973A-SNU_v1_8	Vigna radiata	CDS
cds-XP_022640843.1	cds-XP_022640843.1_VrVC1973A-SNU_v1_7	Vigna radiata	CDS
cds-XP_022640843.1	cds-XP_022640843.1_VrVC1973A-SNU_v1_6	Vigna radiata	CDS
cds-XP_022640843.1	cds-XP_022640843.1_VrVC1973A-SNU_v1_5	Vigna radiata	CDS
cds-XP_022640843.1	cds-XP_022640843.1_VrVC1973A-SNU_v1_4	Vigna radiata	CDS
cds-XP_022640843.1	cds-XP_022640843.1_VrVC1973A-SNU_v1_3	Vigna radiata	CDS
cds-XP_022640843.1	cds-XP_022640843.1_VrVC1973A-SNU_v1_2	Vigna radiata	CDS
cds-XP_022640843.1	cds-XP_022640843.1_VrVC1973A-SNU_v1	Vigna radiata	CDS

Homology

[Close]

BLAST of rna-XM_022785122.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q5PP51|OEP39_ARATH (Outer envelope protein 39, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=P39 PE=2 SV=1)

HSP 1 Score: 336.265 bits (861), Expect = 5.984e-113
Identity = 174/360 (48.33%), Postives = 243/360 (67.50%), Query Frame = 0

Query:    1 MGANKSVHVGRSKLDIGVDFTRRLCSSDMK---RLSRCLVSMATGSLRWKQPGLIYYSDLLDISWHKGLHDSDVLVTYRYHRPRDIGPPSLTIKHSVSPEVRIHGIPMNSFRHSQSQGVRLSELSIGFDYVEPSESDSTKGKATGVYFKRFHFSHDGGRSISTDRDGFQLTRSGSPSDNVIAVSQESRFQEENDNSFTNFSVHMELGTAIPPTLLTYYRFEVTAARGIKLGPALFFSRMSGGTVKGSFAPYQAFAIGGPSSVRGYGEGAIGVGQSCLLSTTELSIPLSKKLTGVIFLDCGSDLWSSDKVPNNPGERHGKPGFGSGIGVGIRFKTPLAHVQVDYAINAFQKGTAYFGISDL 357
            MGA KS+H GR+K+D+ VDFT +LC+S M    R +   +S+  GSL  K P L   S+ LD+SW KGL+DS+VLV +R  RP         I+HS+SPE+ +HG P+++F  S S GV LS+L++G D  EP+ S  +    T + F+     +D GR+I+ D DGF +T SG+  D+++ + QESRF +  D   ++FS+ +E G  +    L + RF+  A++G++ GPA   + ++GG++ G  APYQAFAIGG  SVRGYGEGA+G G+SCL++ TEL++PL+K   G IFLDCG+DL SS  VP NP  R GKPGFG G G G+RFK+PL H+QVDYAINAF + T YFG+++L
Sbjct:    1 MGAQKSIHAGRAKIDVNVDFTHKLCTSLMFPAFRDTSSPLSLVIGSLCIKHPNLFGGSEKLDVSWDKGLYDSNVLVAFRRPRPEWRPQQCFFIQHSLSPEIGVHGTPVDNFSRSGSGGVNLSKLALGLDLSEPASSKWSS--TTSIKFEHVRPINDDGRAITRDLDGFPITCSGNTHDSMVVLKQESRFAKATDQGLSHFSMQIEQGIPVVSKWLIFNRFKFVASKGVRFGPAFLLASLTGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLVANTELALPLNKMTEGTIFLDCGTDLGSSRLVPGNPSMRQGKPGFGYGFGYGLRFKSPLGHLQVDYAINAFNQKTLYFGVTNL 358

[Close]

BLAST of rna-XM_022785122.1 vs. UniProtKB/Swiss-Prot
Match: sp|F4JF35|OEP36_ARATH (Outer envelope protein 36, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=P36 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 1.241e-54
Identity = 116/301 (38.54%), Postives = 165/301 (54.82%), Query Frame = 0

Query:  103 IPMNSFRHSQSQ---GVRLSELSIGFDYVEPSESD-----STKGKATGVYFKR-----FHFSHDGGRSISTDRDGFQLTRS----GSPSDNVIAVSQESRFQEENDNSFTNFSVHMELGTAIPPTLLTYYRFEVTAARGIKLGPALFFSRMSGGTVKGSFAPYQAFAIGGPSSVRGYGEGAIGVGQSCLLSTTELSIPLSKKLTGVIFLDCGSDLWSSDKVP-----------------------------NNPGERHGKPGFGSGIGVGIRFKTPLAHVQVDYAINAFQKGTAYFGISDL 357
            + +N  R+S S    GV LS+L++G D  EP+ S      S K +  G Y  +        +   GR   + R  + +  S    G+  D+++ + QESRF +  D   ++FS+ +E G  +    L + RF+  A++G++ GPA   + ++GG++ G   PYQAFAIGG  SVRGYGE A+G G+SCL++ TEL+   +K   G IFLDCG+DL SS  VP                              NP  R GKPGFG G G G+RFK+PL H+QVDYA+NAF + T YFGI++L
Sbjct:   20 LDLNGVRNSASSYSGGVNLSKLAVGLDLSEPASSKWSSTTSVKFEVPGHYLLQTLYMCVRLTMTDGRYQRSGRISYNMQNSLLCSGNTHDSMVVLKQESRFAKATDQGLSHFSMQIEQGIPVVSNWLIFNRFKFVASKGVRFGPAFPLASLTGGSIVGDMTPYQAFAIGGLGSVRGYGEVAVGSGRSCLVANTELA---NKMTEGTIFLDCGTDLGSSRLVPVSSLYLLRTRTIKKLLRHENDKAVAELVSGNPSLRQGKPGFGYGFGYGLRFKSPLGHLQVDYAMNAFNQKTLYFGITNL 317

[Close]

BLAST of rna-XM_022785122.1 vs. UniProtKB/Swiss-Prot
Match: sp|A2X208|OEP80_ORYSI (Outer envelope protein 80, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=OEP80 PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 6.780e-41
Identity = 96/268 (35.82%), Postives = 143/268 (53.36%), Query Frame = 0

Query:   87 SLTIKHSVSPEVRIHGIPMNSFRHSQSQGVRLSELSIGFDYVEPSESDSTKGKATGVYFKRFHFSHDGGRSISTDRDGFQLTRSGSPSDNVIAVSQESRFQEENDNSFTNFSVHMELGTAIPPTLLTYYRFEVTAARGIKLGPALFFSRMSGGTVKGSFAPYQAFAIGGPSSVRGYGEGAIGVGQSCLLSTTELSIPLSKKLTGVIFLDCGSDLWSSDKVPNNPGERHGKPGFGSGIGVGIRFKTPLAHVQVDYAINAFQKGTAYFGI 354
            ++ +++S +P   IHG       H     + +  ++ G +Y  P     +     G+ F+      D G  I  D    QLT SG+  D+ +    ES + +  D S T F  ++E G  I P  L++ R      +G ++GPA      SGG V+G+F+P++AFAIGG +SVRGY EGA+G G+S  + + E+S  +   L GV+F D GSDL S  KVP +P    GKPG G G GVGIR  +PL  ++++YA N  Q    +FG+
Sbjct:  401 TIMVQNSRTPGTLIHG-----GDHPDHGPITIGRVTAGIEYSRPFRPKWSG--TLGLIFQHAGARDDKGNPIIRDFYNSQLTASGNAYDDTLLAKLESVYTDSGDRSSTMFVFNIEQGLPILPEWLSFNRVTARLRQGYEIGPARLLLSASGGHVEGNFSPHEAFAIGGTNSVRGYEEGAVGSGRSYAVGSGEVSCRMFGPLEGVVFGDYGSDLSSGPKVPGDPAGARGKPGSGYGYGVGIRVDSPLGPLRLEYAFNDKQARRFHFGV 661

[Close]

BLAST of rna-XM_022785122.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9C5J8|OEP80_ARATH (Outer envelope protein 80, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OEP80 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 3.693e-40
Identity = 104/323 (32.20%), Postives = 157/323 (48.61%), Query Frame = 0

Query:   42 GSLRWKQPGLIYYSDLLDISWHKGLHDSDVLVTY----------RYHRPRDIGPPSLTIKHSVSPEVRIHGIPMNSFRHSQSQGVRLSELSIGFDYVEPSESDSTKGKATGVYFKRFHFSHDGGRSISTDRDGFQLTRSGSPSDNVIAVSQESRFQEENDNSFTNFSVHMELGTAIPPTLLTYYRFEVTAARGIKLGPALFFSRMSGGTVKGSFAPYQAFAIGGPSSVRGYGEGAIGVGQSCLLSTTELSIPLSKKLTGVIFLDCGSDLWSSDKVPNNPGERHGKPGFGSGIGVGIRFKTPLAHVQVDYAINAFQKGTAYFGI 354
            GS  +    L   +  L++S  +G  DS   + Y          R  R       S+ +++S +P   +HG          +  + +  ++ G +Y  P       G A G+ F+      + G  I  D     LT SG P D  +    ES +    D   T F+ +ME G  + P  L + R    A +GI +GPA F   +SGG V G F+P++AF IGG +SVRGY EGA+G G+S ++ + ELS P+   + GVIF D G+D+ S   VP +P     KPG G G G+G+R  +PL  ++++YA N    G  +FG+
Sbjct:  421 GSFAYSHRNLFGRNQKLNVSLERGQIDSIFRINYTDPWIEGDDKRTSR-------SIMVQNSRTPGNLVHG------NQPDNSSLTIGRVTAGVEYSRPFRP-KWNGTA-GLIFQHAGARDEQGNPIIKDFYSSPLTASGKPHDETMLAKLESIYTGSGDQGSTMFAFNMEQGLPVLPEWLCFNRVTGRARKGIHIGPARFLFSLSGGHVVGKFSPHEAFVIGGTNSVRGYEEGAVGSGRSYVVGSGELSFPVRGPVEGVIFTDYGTDMGSGSTVPGDPAGARLKPGSGYGYGLGVRVDSPLGPLRLEYAFNDQHAGRFHFGV 728

[Close]

BLAST of rna-XM_022785122.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q6H7M7|OEP80_ORYSJ (Outer envelope protein 80, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=OEP80 PE=3 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 4.224e-35
Identity = 95/268 (35.45%), Postives = 143/268 (53.36%), Query Frame = 0

Query:   87 SLTIKHSVSPEVRIHGIPMNSFRHSQSQGVRLSELSIGFDYVEPSESDSTKGKATGVYFKRFHFSHDGGRSISTDRDGFQLTRSGSPSDNVIAVSQESRFQEENDNSFTNFSVHMELGTAIPPTLLTYYRFEVTAARGIKLGPALFFSRMSGGTVKGSFAPYQAFAIGGPSSVRGYGEGAIGVGQSCLLSTTELSIPLSKKLTGVIFLDCGSDLWSSDKVPNNPGERHGKPGFGSGIGVGIRFKTPLAHVQVDYAINAFQKGTAYFGI 354
            ++ +++S +P   IHG       H     + +  ++ G +Y  P     +     G+ F+      D G  I  D    QLT SG+  D+ +    ES + +  D S T F  ++E G  I P  L++ R      +G ++GPA      SGG V+G+F+P++AFAIGG +SVRGY EGA+G G+S  + + E+S  +   L GV+F D GSDL S  KVP +P    GKPG G G GVG+R  +PL  ++++YA N  Q    +FG+
Sbjct:  401 TIMVQNSRTPGTLIHG-----GDHPDHGPITIGRVTAGIEYSRPFRPKWSG--TLGLIFQHAGARDDKGNPIIRDFYNSQLTASGNAYDDTLLAKLESVYTDSGDRSSTMFVFNIEQGLPILPEWLSFNRVTARLRQGYEIGPARLLLSASGGHVEGNFSPHEAFAIGGTNSVRGYEEGAVGSGRSYAVGSGEVSCRMFGPLEGVVFGDYGSDLSSGPKVPGDPAGARGKPGSGYGYGVGVRVDSPLGPLRLEYAFNDKQARRFHFGV 661

[Close]

BLAST of rna-XM_022785122.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9STE8|TC753_ARATH (Protein TOC75-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC75-3 PE=1 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 5.723e-10
Identity = 60/195 (30.77%), Postives = 84/195 (43.08%), Query Frame = 0

Query:  160 TDRDGF---QLTRSGSPSDNVIAVSQESRFQEEND----NSFTNFSVHMELGTAIPPTLLTYYRF----EVTAARGIKLGPALFFSRMSGGTVKGSFAPYQAFAIGGPSSVRGYGEGAIGVGQSCLLSTTELSIPLSKKLTGVIFLDCGSDLWSSDKVPNNPGERHGKPGFGSGIGVGIRFKTPLAHVQVDYAIN 343
             DR  F    +TR  +   N   V Q + FQ +      + F  F+ H           LT  +F    EV    G    P L      GG V G    Y AF +GGP SVRGY  G +G  ++      E+ IP+ K      F++ G+DL SS  V  NP   + + G GS  G G++    L  V+ +YA++
Sbjct:  624 VDRMAFLQANITRDNTKFVNGAVVGQRTVFQVDQGLGIGSKFPFFNRHQ----------LTMTKFIQLREVEQGAGKSPPPVLVLHGHYGGCV-GDLPSYDAFVLGGPYSVRGYNMGELGAARNIAEVGAEIRIPV-KNTHVYAFVEHGNDLGSSKDVKGNPTAVYRRTGQGSSYGAGVK----LGLVRAEYAVD 802

[Close]

BLAST of rna-XM_022785122.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q5IZC8|TC754_ARATH (Protein TOC75-4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC75-4 PE=2 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 8.216e-10
Identity = 41/114 (35.96%), Postives = 58/114 (50.88%), Query Frame = 0

Query:  229 PALFFSRMSGGTVKGSFAPYQAFAIGGPSSVRGYGEGAIGVGQSCLLSTTELSIPLSKKLTGVIFLDCGSDLWSSDKVPNNPGERHGKPGFGSGIGVGIRFKTPLAHVQVDYAI 342
            P L      GG + G    Y  FA+GGP+SVRGY  G +G  ++ L    E+ IP+ K      F + G+DL SS  V  NP   + K G GS  G+G++    L  V+ +Y +
Sbjct:  272 PVLVLHGRYGGCI-GDLPSYDVFALGGPNSVRGYSMGELGAAKNILELGAEIRIPV-KNTHVYAFAEHGNDLGSSKDVKGNPTGLYRKMGHGSSYGLGVK----LGMVRAEYTV 379

[Close]

BLAST of rna-XM_022785122.1 vs. Araport11
Match: AT3G44160.1 (| Outer membrane OMP85 family protein | Chr3:15889225-15891814 REVERSE LENGTH=362 | 201606)

HSP 1 Score: 336.265 bits (861), Expect = 6.123e-114
Identity = 174/360 (48.33%), Postives = 243/360 (67.50%), Query Frame = 0

Query:    1 MGANKSVHVGRSKLDIGVDFTRRLCSSDMK---RLSRCLVSMATGSLRWKQPGLIYYSDLLDISWHKGLHDSDVLVTYRYHRPRDIGPPSLTIKHSVSPEVRIHGIPMNSFRHSQSQGVRLSELSIGFDYVEPSESDSTKGKATGVYFKRFHFSHDGGRSISTDRDGFQLTRSGSPSDNVIAVSQESRFQEENDNSFTNFSVHMELGTAIPPTLLTYYRFEVTAARGIKLGPALFFSRMSGGTVKGSFAPYQAFAIGGPSSVRGYGEGAIGVGQSCLLSTTELSIPLSKKLTGVIFLDCGSDLWSSDKVPNNPGERHGKPGFGSGIGVGIRFKTPLAHVQVDYAINAFQKGTAYFGISDL 357
            MGA KS+H GR+K+D+ VDFT +LC+S M    R +   +S+  GSL  K P L   S+ LD+SW KGL+DS+VLV +R  RP         I+HS+SPE+ +HG P+++F  S S GV LS+L++G D  EP+ S  +    T + F+     +D GR+I+ D DGF +T SG+  D+++ + QESRF +  D   ++FS+ +E G  +    L + RF+  A++G++ GPA   + ++GG++ G  APYQAFAIGG  SVRGYGEGA+G G+SCL++ TEL++PL+K   G IFLDCG+DL SS  VP NP  R GKPGFG G G G+RFK+PL H+QVDYAINAF + T YFG+++L
Sbjct:    1 MGAQKSIHAGRAKIDVNVDFTHKLCTSLMFPAFRDTSSPLSLVIGSLCIKHPNLFGGSEKLDVSWDKGLYDSNVLVAFRRPRPEWRPQQCFFIQHSLSPEIGVHGTPVDNFSRSGSGGVNLSKLALGLDLSEPASSKWSS--TTSIKFEHVRPINDDGRAITRDLDGFPITCSGNTHDSMVVLKQESRFAKATDQGLSHFSMQIEQGIPVVSKWLIFNRFKFVASKGVRFGPAFLLASLTGGSIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLVANTELALPLNKMTEGTIFLDCGTDLGSSRLVPGNPSMRQGKPGFGYGFGYGLRFKSPLGHLQVDYAINAFNQKTLYFGVTNL 358

[Close]

BLAST of rna-XM_022785122.1 vs. Araport11
Match: AT3G48620.1 (| Outer membrane OMP85 family protein | Chr3:18016175-18017750 FORWARD LENGTH=321 | 201606)

HSP 1 Score: 185.267 bits (469), Expect = 1.270e-55
Identity = 116/301 (38.54%), Postives = 165/301 (54.82%), Query Frame = 0

Query:  103 IPMNSFRHSQSQ---GVRLSELSIGFDYVEPSESD-----STKGKATGVYFKR-----FHFSHDGGRSISTDRDGFQLTRS----GSPSDNVIAVSQESRFQEENDNSFTNFSVHMELGTAIPPTLLTYYRFEVTAARGIKLGPALFFSRMSGGTVKGSFAPYQAFAIGGPSSVRGYGEGAIGVGQSCLLSTTELSIPLSKKLTGVIFLDCGSDLWSSDKVP-----------------------------NNPGERHGKPGFGSGIGVGIRFKTPLAHVQVDYAINAFQKGTAYFGISDL 357
            + +N  R+S S    GV LS+L++G D  EP+ S      S K +  G Y  +        +   GR   + R  + +  S    G+  D+++ + QESRF +  D   ++FS+ +E G  +    L + RF+  A++G++ GPA   + ++GG++ G   PYQAFAIGG  SVRGYGE A+G G+SCL++ TEL+   +K   G IFLDCG+DL SS  VP                              NP  R GKPGFG G G G+RFK+PL H+QVDYA+NAF + T YFGI++L
Sbjct:   20 LDLNGVRNSASSYSGGVNLSKLAVGLDLSEPASSKWSSTTSVKFEVPGHYLLQTLYMCVRLTMTDGRYQRSGRISYNMQNSLLCSGNTHDSMVVLKQESRFAKATDQGLSHFSMQIEQGIPVVSNWLIFNRFKFVASKGVRFGPAFPLASLTGGSIVGDMTPYQAFAIGGLGSVRGYGEVAVGSGRSCLVANTELA---NKMTEGTIFLDCGTDLGSSRLVPVSSLYLLRTRTIKKLLRHENDKAVAELVSGNPSLRQGKPGFGYGFGYGLRFKSPLGHLQVDYAMNAFNQKTLYFGITNL 317

[Close]

BLAST of rna-XM_022785122.1 vs. Araport11
Match: AT5G19620.1 (| outer envelope protein of 80 kDa | Chr5:6623323-6627641 FORWARD LENGTH=732 | 201606)

HSP 1 Score: 154.066 bits (388), Expect = 3.779e-41
Identity = 104/323 (32.20%), Postives = 157/323 (48.61%), Query Frame = 0

Query:   42 GSLRWKQPGLIYYSDLLDISWHKGLHDSDVLVTY----------RYHRPRDIGPPSLTIKHSVSPEVRIHGIPMNSFRHSQSQGVRLSELSIGFDYVEPSESDSTKGKATGVYFKRFHFSHDGGRSISTDRDGFQLTRSGSPSDNVIAVSQESRFQEENDNSFTNFSVHMELGTAIPPTLLTYYRFEVTAARGIKLGPALFFSRMSGGTVKGSFAPYQAFAIGGPSSVRGYGEGAIGVGQSCLLSTTELSIPLSKKLTGVIFLDCGSDLWSSDKVPNNPGERHGKPGFGSGIGVGIRFKTPLAHVQVDYAINAFQKGTAYFGI 354
            GS  +    L   +  L++S  +G  DS   + Y          R  R       S+ +++S +P   +HG          +  + +  ++ G +Y  P       G A G+ F+      + G  I  D     LT SG P D  +    ES +    D   T F+ +ME G  + P  L + R    A +GI +GPA F   +SGG V G F+P++AF IGG +SVRGY EGA+G G+S ++ + ELS P+   + GVIF D G+D+ S   VP +P     KPG G G G+G+R  +PL  ++++YA N    G  +FG+
Sbjct:  421 GSFAYSHRNLFGRNQKLNVSLERGQIDSIFRINYTDPWIEGDDKRTSR-------SIMVQNSRTPGNLVHG------NQPDNSSLTIGRVTAGVEYSRPFRP-KWNGTA-GLIFQHAGARDEQGNPIIKDFYSSPLTASGKPHDETMLAKLESIYTGSGDQGSTMFAFNMEQGLPVLPEWLCFNRVTGRARKGIHIGPARFLFSLSGGHVVGKFSPHEAFVIGGTNSVRGYEEGAVGSGRSYVVGSGELSFPVRGPVEGVIFTDYGTDMGSGSTVPGDPAGARLKPGSGYGYGLGVRVDSPLGPLRLEYAFNDQHAGRFHFGV 728

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BLAST of rna-XM_022785122.1 vs. Araport11
Match: AT3G46740.1 (| translocon at the outer envelope membrane of chloroplasts 75-III | Chr3:17216104-17219296 REVERSE LENGTH=818 | 201606)

HSP 1 Score: 64.3142 bits (155), Expect = 5.855e-11
Identity = 60/195 (30.77%), Postives = 84/195 (43.08%), Query Frame = 0

Query:  160 TDRDGF---QLTRSGSPSDNVIAVSQESRFQEEND----NSFTNFSVHMELGTAIPPTLLTYYRF----EVTAARGIKLGPALFFSRMSGGTVKGSFAPYQAFAIGGPSSVRGYGEGAIGVGQSCLLSTTELSIPLSKKLTGVIFLDCGSDLWSSDKVPNNPGERHGKPGFGSGIGVGIRFKTPLAHVQVDYAIN 343
             DR  F    +TR  +   N   V Q + FQ +      + F  F+ H           LT  +F    EV    G    P L      GG V G    Y AF +GGP SVRGY  G +G  ++      E+ IP+ K      F++ G+DL SS  V  NP   + + G GS  G G++    L  V+ +YA++
Sbjct:  624 VDRMAFLQANITRDNTKFVNGAVVGQRTVFQVDQGLGIGSKFPFFNRHQ----------LTMTKFIQLREVEQGAGKSPPPVLVLHGHYGGCV-GDLPSYDAFVLGGPYSVRGYNMGELGAARNIAEVGAEIRIPV-KNTHVYAFVEHGNDLGSSKDVKGNPTAVYRRTGQGSSYGAGVK----LGLVRAEYAVD 802

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BLAST of rna-XM_022785122.1 vs. Araport11
Match: AT4G09080.3 (| Outer membrane OMP85 family protein | Chr4:5804763-5806093 FORWARD LENGTH=325 | 201606)

HSP 1 Score: 63.1586 bits (152), Expect = 7.076e-11
Identity = 41/114 (35.96%), Postives = 58/114 (50.88%), Query Frame = 0

Query:  229 PALFFSRMSGGTVKGSFAPYQAFAIGGPSSVRGYGEGAIGVGQSCLLSTTELSIPLSKKLTGVIFLDCGSDLWSSDKVPNNPGERHGKPGFGSGIGVGIRFKTPLAHVQVDYAI 342
            P L      GG + G    Y  FA+GGP+SVRGY  G +G  ++ L    E+ IP+ K      F + G+DL SS  V  NP   + K G GS  G+G++    L  V+ +Y +
Sbjct:  201 PVLVLHGRYGGCI-GDLPSYDVFALGGPNSVRGYSMGELGAAKNILELGAEIRIPV-KNTHVYAFAEHGNDLGSSKDVKGNPTGLYRKMGHGSSYGLGVK----LGMVRAEYTV 308

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BLAST of rna-XM_022785122.1 vs. Araport11
Match: AT4G09080.1 (| Outer membrane OMP85 family protein | Chr4:5804451-5806093 FORWARD LENGTH=396 | 201606)

HSP 1 Score: 63.1586 bits (152), Expect = 8.406e-11
Identity = 41/114 (35.96%), Postives = 58/114 (50.88%), Query Frame = 0

Query:  229 PALFFSRMSGGTVKGSFAPYQAFAIGGPSSVRGYGEGAIGVGQSCLLSTTELSIPLSKKLTGVIFLDCGSDLWSSDKVPNNPGERHGKPGFGSGIGVGIRFKTPLAHVQVDYAI 342
            P L      GG + G    Y  FA+GGP+SVRGY  G +G  ++ L    E+ IP+ K      F + G+DL SS  V  NP   + K G GS  G+G++    L  V+ +Y +
Sbjct:  272 PVLVLHGRYGGCI-GDLPSYDVFALGGPNSVRGYSMGELGAAKNILELGAEIRIPV-KNTHVYAFAEHGNDLGSSKDVKGNPTGLYRKMGHGSSYGLGVK----LGMVRAEYTV 379

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BLAST of rna-XM_022785122.1 vs. Araport11
Match: AT4G09080.2 (| Outer membrane OMP85 family protein | Chr4:5804418-5806093 FORWARD LENGTH=407 | 201606)

HSP 1 Score: 63.1586 bits (152), Expect = 8.915e-11
Identity = 41/114 (35.96%), Postives = 58/114 (50.88%), Query Frame = 0

Query:  229 PALFFSRMSGGTVKGSFAPYQAFAIGGPSSVRGYGEGAIGVGQSCLLSTTELSIPLSKKLTGVIFLDCGSDLWSSDKVPNNPGERHGKPGFGSGIGVGIRFKTPLAHVQVDYAI 342
            P L      GG + G    Y  FA+GGP+SVRGY  G +G  ++ L    E+ IP+ K      F + G+DL SS  V  NP   + K G GS  G+G++    L  V+ +Y +
Sbjct:  283 PVLVLHGRYGGCI-GDLPSYDVFALGGPNSVRGYSMGELGAAKNILELGAEIRIPV-KNTHVYAFAEHGNDLGSSKDVKGNPTGLYRKMGHGSSYGLGVK----LGMVRAEYTV 390

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BLAST of rna-XM_022785122.1 vs. UniProtKB/TrEMBL
Match: tr|A0A3Q0FAK6|A0A3Q0FAK6_VIGRR (outer envelope protein 80, chloroplastic OS=Vigna radiata var. radiata OX=3916 GN=LOC106770399 PE=4 SV=1)

HSP 1 Score: 734.176 bits (1894), Expect = 0.000e+0
Identity = 359/359 (100.00%), Postives = 359/359 (100.00%), Query Frame = 0

Query:    1 MGANKSVHVGRSKLDIGVDFTRRLCSSDMKRLSRCLVSMATGSLRWKQPGLIYYSDLLDISWHKGLHDSDVLVTYRYHRPRDIGPPSLTIKHSVSPEVRIHGIPMNSFRHSQSQGVRLSELSIGFDYVEPSESDSTKGKATGVYFKRFHFSHDGGRSISTDRDGFQLTRSGSPSDNVIAVSQESRFQEENDNSFTNFSVHMELGTAIPPTLLTYYRFEVTAARGIKLGPALFFSRMSGGTVKGSFAPYQAFAIGGPSSVRGYGEGAIGVGQSCLLSTTELSIPLSKKLTGVIFLDCGSDLWSSDKVPNNPGERHGKPGFGSGIGVGIRFKTPLAHVQVDYAINAFQKGTAYFGISDLLI 359
            MGANKSVHVGRSKLDIGVDFTRRLCSSDMKRLSRCLVSMATGSLRWKQPGLIYYSDLLDISWHKGLHDSDVLVTYRYHRPRDIGPPSLTIKHSVSPEVRIHGIPMNSFRHSQSQGVRLSELSIGFDYVEPSESDSTKGKATGVYFKRFHFSHDGGRSISTDRDGFQLTRSGSPSDNVIAVSQESRFQEENDNSFTNFSVHMELGTAIPPTLLTYYRFEVTAARGIKLGPALFFSRMSGGTVKGSFAPYQAFAIGGPSSVRGYGEGAIGVGQSCLLSTTELSIPLSKKLTGVIFLDCGSDLWSSDKVPNNPGERHGKPGFGSGIGVGIRFKTPLAHVQVDYAINAFQKGTAYFGISDLLI
Sbjct:    1 MGANKSVHVGRSKLDIGVDFTRRLCSSDMKRLSRCLVSMATGSLRWKQPGLIYYSDLLDISWHKGLHDSDVLVTYRYHRPRDIGPPSLTIKHSVSPEVRIHGIPMNSFRHSQSQGVRLSELSIGFDYVEPSESDSTKGKATGVYFKRFHFSHDGGRSISTDRDGFQLTRSGSPSDNVIAVSQESRFQEENDNSFTNFSVHMELGTAIPPTLLTYYRFEVTAARGIKLGPALFFSRMSGGTVKGSFAPYQAFAIGGPSSVRGYGEGAIGVGQSCLLSTTELSIPLSKKLTGVIFLDCGSDLWSSDKVPNNPGERHGKPGFGSGIGVGIRFKTPLAHVQVDYAINAFQKGTAYFGISDLLI 359

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BLAST of rna-XM_022785122.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6N392|A0A4D6N392_VIGUN (Outer membrane protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG9g1984 PE=4 SV=1)

HSP 1 Score: 642.114 bits (1655), Expect = 0.000e+0
Identity = 321/359 (89.42%), Postives = 337/359 (93.87%), Query Frame = 0

Query:    1 MGANKSVHVGRSKLDIGVDFTRRLCSSDMKRLSRCLVSMATGSLRWKQPGLIYYSDLLDISWHKGLHDSDVLVTYRYHRPRDIGPPSLTIKHSVSPEVRIHGIPMNSFRHSQSQGVRLSELSIGFDYVEPSESDSTKGKATGVYFKRFHFSHDGGRSISTDRDGFQLTRSGSPSDNVIAVSQESRFQEENDNSFTNFSVHMELGTAIPPTLLTYYRFEVTAARGIKLGPALFFSRMSGGTVKGSFAPYQAFAIGGPSSVRGYGEGAIGVGQSCLLSTTELSIPLSKKLTGVIFLDCGSDLWSSDKVPNNPGERHGKPGFGSGIGVGIRFKTPLAHVQVDYAINAFQKGTAYFGISDLLI 359
            MGANKSVHVGRSKLD+GVDFTRRL +S M+RLSR LVSMATGSL  KQPGLIYYSDLLD+SWHKGLHDSD+L+TYRYHRPRDIGPPSLTIKHSVSPEVRIHGIP N+FRHSQSQGVRLS+LSIGFDYV+PSES STKGKAT VYFKRFHFSHDGGRSISTDRDGFQLTRSG+PSDNVI VSQESRF++E DN FTNFSV MELGTAI   LLTYYRFEVTAARGIKLGPALFFSRMS GTVKGSFAPYQAFA+GGPSSVRGYGEGAIGVGQSCLLSTTELSIPLSKKLTGVIFLDCGSDLWS DKVPNNPGERHGKPGFG GIG G+RFKTPLA + VDYAINAFQKGTAYFGI DLL+
Sbjct:    1 MGANKSVHVGRSKLDVGVDFTRRLYNSHMQRLSRGLVSMATGSLGLKQPGLIYYSDLLDMSWHKGLHDSDLLLTYRYHRPRDIGPPSLTIKHSVSPEVRIHGIPTNNFRHSQSQGVRLSKLSIGFDYVDPSESGSTKGKATCVYFKRFHFSHDGGRSISTDRDGFQLTRSGTPSDNVIVVSQESRFEDEKDNGFTNFSVQMELGTAISQNLLTYYRFEVTAARGIKLGPALFFSRMSSGTVKGSFAPYQAFAVGGPSSVRGYGEGAIGVGQSCLLSTTELSIPLSKKLTGVIFLDCGSDLWSGDKVPNNPGERHGKPGFGFGIGGGMRFKTPLAQIHVDYAINAFQKGTAYFGIRDLLL 359

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BLAST of rna-XM_022785122.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9TJF2|A0A0L9TJF2_PHAAN (Omp85 domain-containing protein (Fragment) OS=Phaseolus angularis OX=3914 GN=LR48_Vigan1086s000400 PE=4 SV=1)

HSP 1 Score: 634.41 bits (1635), Expect = 0.000e+0
Identity = 308/318 (96.86%), Postives = 314/318 (98.74%), Query Frame = 0

Query:   42 GSLRWKQPGLIYYSDLLDISWHKGLHDSDVLVTYRYHRPRDIGPPSLTIKHSVSPEVRIHGIPMNSFRHSQSQGVRLSELSIGFDYVEPSESDSTKGKATGVYFKRFHFSHDGGRSISTDRDGFQLTRSGSPSDNVIAVSQESRFQEENDNSFTNFSVHMELGTAIPPTLLTYYRFEVTAARGIKLGPALFFSRMSGGTVKGSFAPYQAFAIGGPSSVRGYGEGAIGVGQSCLLSTTELSIPLSKKLTGVIFLDCGSDLWSSDKVPNNPGERHGKPGFGSGIGVGIRFKTPLAHVQVDYAINAFQKGTAYFGISDLLI 359
            GSLR KQPGLIYYSDLLD+SWHKGLHDSD+LVTYRYHRPRDIGPPSLTIKHSVSPEVRIHGIPMNSFRHSQSQGVRLSELSIGFDYVEPSESDSTKGKATGVYFKRFHFSHDGGRSISTDRDGFQLTRSGSPSDNVIAVSQESRFQEENDNSFTNFSV MELGTAIPPTLLTYYRFEVTAARGIKLGPALFFSRMSGGTVKGSFAPYQAFAIGGPSSVRGYGEGA+GVGQSCLLSTTELSIPLSKKLTGVIFLDCGSDLWSSDKVPNNPGERHGKPGFG GIGVGIRFKTPLA +QVDYAINAFQ+GTAYFGISDLL+
Sbjct:    1 GSLRLKQPGLIYYSDLLDMSWHKGLHDSDLLVTYRYHRPRDIGPPSLTIKHSVSPEVRIHGIPMNSFRHSQSQGVRLSELSIGFDYVEPSESDSTKGKATGVYFKRFHFSHDGGRSISTDRDGFQLTRSGSPSDNVIAVSQESRFQEENDNSFTNFSVQMELGTAIPPTLLTYYRFEVTAARGIKLGPALFFSRMSGGTVKGSFAPYQAFAIGGPSSVRGYGEGAVGVGQSCLLSTTELSIPLSKKLTGVIFLDCGSDLWSSDKVPNNPGERHGKPGFGYGIGVGIRFKTPLAQIQVDYAINAFQEGTAYFGISDLLL 318

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BLAST of rna-XM_022785122.1 vs. UniProtKB/TrEMBL
Match: tr|V7BHC1|V7BHC1_PHAVU (Omp85 domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_007G195200g PE=4 SV=1)

HSP 1 Score: 603.594 bits (1555), Expect = 0.000e+0
Identity = 304/360 (84.44%), Postives = 327/360 (90.83%), Query Frame = 0

Query:    1 MGANKSVHVGRSKLDIGVDFTRRLCSSDMKRLSRCLVSMATGSLRWKQPGLIYYSDLLDISWHKGLHDSDVLVTYRYH-RPRDIGPPSLTIKHSVSPEVRIHGIPMNSFRHSQSQGVRLSELSIGFDYVEPSESDSTKGKATGVYFKRFHFSHDGGRSISTDRDGFQLTRSGSPSDNVIAVSQESRFQEENDNSFTNFSVHMELGTAIPPTLLTYYRFEVTAARGIKLGPALFFSRMSGGTVKGSFAPYQAFAIGGPSSVRGYGEGAIGVGQSCLLSTTELSIPLSKKLTGVIFLDCGSDLWSSDKVPNNPGERHGKPGFGSGIGVGIRFKTPLAHVQVDYAINAFQKGTAYFGISDLLI 359
            MGANKSVHVGRSKL +GVDFTRRLC+S M RLSR LVSM TGSLR K PGL +YSDLLD+SWHKGLHDSD+LVTYRYH RP DIGP SL IKHSVSPEV I+GIPMN+FRHSQSQGVRLS+L IGFDYV PSE+DS+KGKAT VYFKRFHFSHDGGRSISTDRDGFQLT SG  SDNVI V QESRF++ENDN FT+FSV MELGT IPPTL TYYR EV++ARGIKLGPALF SRMSGGT+KGSFAPYQAFAIGGPSSVRGYGEGAIGVGQSCL++T+ELSIPLSKKLTGVIFLDCGSDLWSS KVPNNPGERHGKPG G GIG GIR+KTPLA +QVDYAINAFQKGTAYF ISDL++
Sbjct:    1 MGANKSVHVGRSKLHVGVDFTRRLCTSHMHRLSRALVSMVTGSLRLKHPGLNHYSDLLDMSWHKGLHDSDLLVTYRYHTRPPDIGPLSLIIKHSVSPEVGIYGIPMNNFRHSQSQGVRLSKLWIGFDYVAPSETDSSKGKATSVYFKRFHFSHDGGRSISTDRDGFQLTHSGGTSDNVIVVRQESRFEDENDNGFTDFSVQMELGTPIPPTLFTYYRLEVSSARGIKLGPALFCSRMSGGTIKGSFAPYQAFAIGGPSSVRGYGEGAIGVGQSCLVTTSELSIPLSKKLTGVIFLDCGSDLWSSHKVPNNPGERHGKPGIGFGIGGGIRYKTPLAQIQVDYAINAFQKGTAYFRISDLVL 360

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BLAST of rna-XM_022785122.1 vs. UniProtKB/TrEMBL
Match: tr|K7LH85|K7LH85_SOYBN (Omp85 domain-containing protein OS=Glycine max OX=3847 GN=100820500 PE=4 SV=1)

HSP 1 Score: 599.742 bits (1545), Expect = 0.000e+0
Identity = 296/362 (81.77%), Postives = 328/362 (90.61%), Query Frame = 0

Query:    1 MGANKSVHVGRSKLDIGVDFTRRLCSSDM---KRLSRCLVSMATGSLRWKQPGLIYYSDLLDISWHKGLHDSDVLVTYRYHRPRDIGPPSLTIKHSVSPEVRIHGIPMNSFRHSQSQGVRLSELSIGFDYVEPSESDSTKGKATGVYFKRFHFSHDGGRSISTDRDGFQLTRSGSPSDNVIAVSQESRFQEENDNSFTNFSVHMELGTAIPPTLLTYYRFEVTAARGIKLGPALFFSRMSGGTVKGSFAPYQAFAIGGPSSVRGYGEGAIGVGQSCLLSTTELSIPLSKKLTGVIFLDCGSDLWSSDKVPNNPGERHGKPGFGSGIGVGIRFKTPLAHVQVDYAINAFQKGTAYFGISDLLI 359
            MGANKS+H GRSKLD+GVDFTR+LCSS M   +RLS  LVSMATGSLR K PGL Y+ DLLD+SWHKGLHDSD+L+TYRYHRP  IGPPSLTIKHSVSPEV IHGIPMN F HS S+GVRLS+LSIGFDY+ PSESDS+K KATGVYFKRFHF+HDGGRSISTD+DGFQLTRSG PSDN+I +SQESR+++E+D+ FTNFSV MELGT IPP LL+YYRFEV+AARGIKLGP +FFSRMSGGTV GSFAPYQAFAIGGPSSVRGYGEGA+GVGQSCL+ST+ELSIPL+KKLTGVIFLDCGSDLWSS KVPNNPGER GKPG G GIG GIRFKTPLA +QVDYAINAFQ+GT YFGISDL++
Sbjct:    1 MGANKSIHTGRSKLDVGVDFTRKLCSSCMLSPRRLSSILVSMATGSLRLKHPGLFYFRDLLDMSWHKGLHDSDLLLTYRYHRPLHIGPPSLTIKHSVSPEVGIHGIPMNKFSHSLSRGVRLSKLSIGFDYIAPSESDSSKAKATGVYFKRFHFTHDGGRSISTDQDGFQLTRSGGPSDNIIVISQESRYEDESDHGFTNFSVQMELGTPIPPILLSYYRFEVSAARGIKLGPTIFFSRMSGGTVMGSFAPYQAFAIGGPSSVRGYGEGAVGVGQSCLVSTSELSIPLNKKLTGVIFLDCGSDLWSSYKVPNNPGERRGKPGIGFGIGGGIRFKTPLAQIQVDYAINAFQQGTTYFGISDLIL 362

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BLAST of rna-XM_022785122.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445IHE0|A0A445IHE0_GLYSO (Outer envelope protein 80, chloroplastic OS=Glycine soja OX=3848 GN=D0Y65_025895 PE=4 SV=1)

HSP 1 Score: 597.045 bits (1538), Expect = 0.000e+0
Identity = 295/362 (81.49%), Postives = 327/362 (90.33%), Query Frame = 0

Query:    1 MGANKSVHVGRSKLDIGVDFTRRLCSSDM---KRLSRCLVSMATGSLRWKQPGLIYYSDLLDISWHKGLHDSDVLVTYRYHRPRDIGPPSLTIKHSVSPEVRIHGIPMNSFRHSQSQGVRLSELSIGFDYVEPSESDSTKGKATGVYFKRFHFSHDGGRSISTDRDGFQLTRSGSPSDNVIAVSQESRFQEENDNSFTNFSVHMELGTAIPPTLLTYYRFEVTAARGIKLGPALFFSRMSGGTVKGSFAPYQAFAIGGPSSVRGYGEGAIGVGQSCLLSTTELSIPLSKKLTGVIFLDCGSDLWSSDKVPNNPGERHGKPGFGSGIGVGIRFKTPLAHVQVDYAINAFQKGTAYFGISDLLI 359
            MGANKS+H GRSKLD+GVDFTR+LCSS M   +RLS  LVSMATGSLR K PGL Y+ DLLD+SWHKGLHDSD+L+TYRYHRP  IGPPSLTIKHSVSPEV IHGIPMN F HS S+GVRLS+LSIGFDY+ PSESDS+K KATGVYFKRFHF HDGGRSISTD+DGFQLTRSG PSDN+I +SQESR+++E+D+ FTNFSV MELGT IPP LL+YYRFEV+AARGIKLGP +FFSRMSGGTV GSFAPYQAFAIGGPSSVRGYGEGA+GVGQSCL+ST+ELSIPL+KKLTGVIFLDCGSDLWSS KVP+NPGER GKPG G GIG GIRFKTPLA +QVDYAINAFQ+GT YFGISDL++
Sbjct:    1 MGANKSIHTGRSKLDVGVDFTRKLCSSCMLSPRRLSSILVSMATGSLRLKHPGLFYFRDLLDMSWHKGLHDSDLLLTYRYHRPLHIGPPSLTIKHSVSPEVGIHGIPMNKFSHSLSRGVRLSKLSIGFDYIAPSESDSSKAKATGVYFKRFHFKHDGGRSISTDQDGFQLTRSGGPSDNIIVISQESRYEDESDHGFTNFSVQMELGTPIPPILLSYYRFEVSAARGIKLGPTIFFSRMSGGTVMGSFAPYQAFAIGGPSSVRGYGEGAVGVGQSCLVSTSELSIPLNKKLTGVIFLDCGSDLWSSYKVPDNPGERRGKPGIGFGIGGGIRFKTPLAQIQVDYAINAFQQGTTYFGISDLIL 362

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BLAST of rna-XM_022785122.1 vs. UniProtKB/TrEMBL
Match: tr|A0A396JV45|A0A396JV45_MEDTR (Putative bacterial surface antigen (D15) OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr1g0184291 PE=4 SV=1)

HSP 1 Score: 420.239 bits (1079), Expect = 1.861e-143
Identity = 212/363 (58.40%), Postives = 275/363 (75.76%), Query Frame = 0

Query:    1 MGANKSVHVGRSKLDIGVDFTRRLCS----SDMKRLSRCLVSMATGSLRWKQPGLIYYSDLLDISWHKGLHDSDVLVTYRYHRPRDIGPPSLTIKHSVSPEVRIHGIPMNSFRHSQSQGVRLSELSIGFDYVEPSESDSTKGKATGVYFKRFHFSHDGGRSISTDRDGFQLTRSGSPSDNVIAVSQESRFQEENDNSFTNFSVHMELGTAIPPTLLTYYRFEVTAARGIKLGPALFFSRMSGGTVKGSFAPYQAFAIGGPSSVRGYGEGAIGVGQSCLLSTTELSIPLSKKLTGVIFLDCGSDLWSSDKVPNNPGERHGKPGFGSGIGVGIRFKTPLAHVQVDYAINAFQKGTAYFGISDLLI 359
            MGA K++  G+SK DIG +F ++LC     S ++  S    S+A+GSL  KQ  L + SD+LDISWHKGL+DS++L+ YRY +P  +G  SLTI+H +SPEV IHG+PMN+F  S SQG+RLS+LSIG D+ EPS S+ +   +TGVYFK   FS+D GRSIS D DGF LT SG P DN+I ++Q+++F++ ND+SFT+FS+ ME G  + P LLT+ RF+  A++G+KLGP +  S +SGG++ GS AP+QAFAIGGP+SVRGYGEGA+G GQS L S TEL+IPL+KKL GV FLDCGSDL SS +VP NPG RHGKPG G GIG GIRFKT LA ++ DYAINAF + + YFGIS+L++
Sbjct:    1 MGARKTILAGKSKFDIGANFIQKLCDFYVPSPLRISSINPFSLASGSLCVKQRELFHNSDMLDISWHKGLYDSNILIGYRYPKPICLGQHSLTIQHLISPEVGIHGVPMNNFSQSVSQGLRLSKLSIGLDFNEPSTSNWST--STGVYFKHNRFSNDSGRSISRDLDGFPLTCSGEPYDNMIVINQKTQFEDVNDHSFTHFSLQMEQGIPLQPNLLTFNRFKFFASKGVKLGPTVLSSWLSGGSIVGSIAPHQAFAIGGPNSVRGYGEGAVGSGQSYLASKTELAIPLNKKLEGVFFLDCGSDLNSSHRVPGNPGHRHGKPGSGYGIGCGIRFKTKLAQIKFDYAINAFHQRSLYFGISNLVL 361

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BLAST of rna-XM_022785122.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6A5NCQ7|A0A6A5NCQ7_LUPAL (Putative bacterial surface antigen (D15) OS=Lupinus albus OX=3870 GN=Lal_00011862 PE=4 SV=1)

HSP 1 Score: 414.846 bits (1065), Expect = 1.886e-141
Identity = 209/362 (57.73%), Postives = 273/362 (75.41%), Query Frame = 0

Query:    1 MGANKSVHVGRSKLDIGVDFTRRLCSSDM---KRLSRCLVSMATGSLRWKQPGLIYYSDLLDISWHKGLHDSDVLVTYRYHRPRDIGPPSLTIKHSVSPEVRIHGIPMNSFRHSQSQGVRLSELSIGFDYVEPSESDSTKGKATGVYFKRFHFSHDGGRSISTDRDGFQLTRSGSPSDNVIAVSQESRFQEENDNSFTNFSVHMELGTAIPPTLLTYYRFEVTAARGIKLGPALFFSRMSGGTVKGSFAPYQAFAIGGPSSVRGYGEGAIGVGQSCLLSTTELSIPLSKKLTGVIFLDCGSDLWSSDKVPNNPGERHGKPGFGSGIGVGIRFKTPLAHVQVDYAINAFQKGTAYFGISDLLI 359
            MGA+KS+H G++KLDIGV+F ++LCSS +    R+    +S+A+GSL  K P     SD+LD+  HKGLHDS++ + YR  R   +G  SLTI+HSVSPEV IHGIPMN+F HS+S+GVRLS+ SIG D  EPS S+ +    T VYFK  HF +D GRSIS D DGF +T SG+P DN+I + QE+RF+E ND+ FT+ S+ ME G  + P LLT+ RF++ A++G KLGPA F +  SGG++ GS AP+QAFAIGGPSSVRGYGEGA+G GQSC++S  EL+ PL+KK+ GVIFLDCGSD+ S+ +VP NPG R GKPG G GIG GIRFKT LA ++VDYA+NAF++ T YFG+S++++
Sbjct:    1 MGAHKSIHAGKAKLDIGVNFIQKLCSSYVLSPHRIYSNPLSLASGSLCLKHPNFFVNSDMLDVLCHKGLHDSNLFIAYRTSRSLCLGQQSLTIQHSVSPEVGIHGIPMNNFSHSESRGVRLSKSSIGLDMHEPSSSNWST--TTSVYFKHIHFINDHGRSISRDLDGFPVTCSGNPFDNMIVIKQENRFEEANDHCFTHVSLQMEQGIPLQPNLLTFNRFKLFASKGFKLGPAFFSTWFSGGSIVGSIAPHQAFAIGGPSSVRGYGEGAVGSGQSCVVSKNELTFPLNKKVKGVIFLDCGSDMKSNHRVPGNPGLRKGKPGSGFGIGYGIRFKTQLAQIKVDYAMNAFRQRTFYFGVSNVIV 360

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BLAST of rna-XM_022785122.1 vs. UniProtKB/TrEMBL
Match: tr|A0A072VWU6|A0A072VWU6_MEDTR (Outer membrane OMP85 family protein OS=Medicago truncatula OX=3880 GN=MTR_1g070230 PE=4 SV=1)

HSP 1 Score: 408.683 bits (1049), Expect = 5.336e-139
Identity = 207/352 (58.81%), Postives = 267/352 (75.85%), Query Frame = 0

Query:   12 SKLDIGVDFTRRLCS----SDMKRLSRCLVSMATGSLRWKQPGLIYYSDLLDISWHKGLHDSDVLVTYRYHRPRDIGPPSLTIKHSVSPEVRIHGIPMNSFRHSQSQGVRLSELSIGFDYVEPSESDSTKGKATGVYFKRFHFSHDGGRSISTDRDGFQLTRSGSPSDNVIAVSQESRFQEENDNSFTNFSVHMELGTAIPPTLLTYYRFEVTAARGIKLGPALFFSRMSGGTVKGSFAPYQAFAIGGPSSVRGYGEGAIGVGQSCLLSTTELSIPLSKKLTGVIFLDCGSDLWSSDKVPNNPGERHGKPGFGSGIGVGIRFKTPLAHVQVDYAINAFQKGTAYFGISDLLI 359
            SK DIG +F ++LC     S ++  S    S+A+GSL  KQ  L + SD+LDISWHKGL+DS++L+ YRY +P  +G  SLTI+H +SPEV IHG+PMN+F  S SQG+RLS+LSIG D+ EPS S+ +   +TGVYFK   FS+D GRSIS D DGF LT SG P DN+I ++Q+++F++ ND+SFT+FS+ ME G  + P LLT+ RF+  A++G+KLGP +  S +SGG++ GS AP+QAFAIGGP+SVRGYGEGA+G GQS L S TEL+IPL+KKL GV FLDCGSDL SS +VP NPG RHGKPG G GIG GIRFKT LA ++ DYAINAF + + YFGIS+L++
Sbjct:    4 SKFDIGANFIQKLCDFYVPSPLRISSINPFSLASGSLCVKQRELFHNSDMLDISWHKGLYDSNILIGYRYPKPICLGQHSLTIQHLISPEVGIHGVPMNNFSQSVSQGLRLSKLSIGLDFNEPSTSNWST--STGVYFKHNRFSNDSGRSISRDLDGFPLTCSGEPYDNMIVINQKTQFEDVNDHSFTHFSLQMEQGIPLQPNLLTFNRFKFFASKGVKLGPTVLSSWLSGGSIVGSIAPHQAFAIGGPNSVRGYGEGAVGSGQSYLASKTELAIPLNKKLEGVFFLDCGSDLNSSHRVPGNPGHRHGKPGSGYGIGCGIRFKTKLAQIKFDYAINAFHQRSLYFGISNLVL 353

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BLAST of rna-XM_022785122.1 vs. UniProtKB/TrEMBL
Match: tr|K7LH86|K7LH86_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100820500 PE=4 SV=1)

HSP 1 Score: 392.119 bits (1006), Expect = 3.992e-134
Identity = 188/238 (78.99%), Postives = 212/238 (89.08%), Query Frame = 0

Query:    1 MGANKSVHVGRSKLDIGVDFTRRLCSSDM---KRLSRCLVSMATGSLRWKQPGLIYYSDLLDISWHKGLHDSDVLVTYRYHRPRDIGPPSLTIKHSVSPEVRIHGIPMNSFRHSQSQGVRLSELSIGFDYVEPSESDSTKGKATGVYFKRFHFSHDGGRSISTDRDGFQLTRSGSPSDNVIAVSQESRFQEENDNSFTNFSVHMELGTAIPPTLLTYYRFEVTAARGIKLGPALFFSR 235
            MGANKS+H GRSKLD+GVDFTR+LCSS M   +RLS  LVSMATGSLR K PGL Y+ DLLD+SWHKGLHDSD+L+TYRYHRP  IGPPSLTIKHSVSPEV IHGIPMN F HS S+GVRLS+LSIGFDY+ PSESDS+K KATGVYFKRFHF+HDGGRSISTD+DGFQLTRSG PSDN+I +SQESR+++E+D+ FTNFSV MELGT IPP LL+YYRFEV+AARGIKLGP +FFSR
Sbjct:    1 MGANKSIHTGRSKLDVGVDFTRKLCSSCMLSPRRLSSILVSMATGSLRLKHPGLFYFRDLLDMSWHKGLHDSDLLLTYRYHRPLHIGPPSLTIKHSVSPEVGIHGIPMNKFSHSLSRGVRLSKLSIGFDYIAPSESDSSKAKATGVYFKRFHFTHDGGRSISTDQDGFQLTRSGGPSDNIIVISQESRYEDESDHGFTNFSVQMELGTPIPPILLSYYRFEVSAARGIKLGPTIFFSR 238

The following BLAST results are available for this feature:

BLAST of rna-XM_022785122.1 vs. UniProtKB/Swiss-Prot
BLAST of rna-XM_022785122.1 vs. Araport11
BLAST of rna-XM_022785122.1 vs. UniProtKB/TrEMBL

BLAST of rna-XM_022785122.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot)
Total hits: 7


Match Name	E-value	Identity	Description
sp\|Q5PP51\|OEP39_ARATH	5.984e-113	48.33	Outer envelope protein 39, chloroplastic OS=Arabid...	[more]
sp\|F4JF35\|OEP36_ARATH	1.241e-54	38.54	Outer envelope protein 36, chloroplastic OS=Arabid...	[more]
sp\|A2X208\|OEP80_ORYSI	6.780e-41	35.82	Outer envelope protein 80, chloroplastic OS=Oryza ...	[more]
sp\|Q9C5J8\|OEP80_ARATH	3.693e-40	32.20	Outer envelope protein 80, chloroplastic OS=Arabid...	[more]
sp\|Q6H7M7\|OEP80_ORYSJ	4.224e-35	35.45	Outer envelope protein 80, chloroplastic OS=Oryza ...	[more]
sp\|Q9STE8\|TC753_ARATH	5.723e-10	30.77	Protein TOC75-3, chloroplastic OS=Arabidopsis thal...	[more]
sp\|Q5IZC8\|TC754_ARATH	8.216e-10	35.96	Protein TOC75-4, chloroplastic OS=Arabidopsis thal...	[more]

BLAST of rna-XM_022785122.1 vs. Araport11
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11)
Total hits: 7


Match Name	E-value	Identity	Description
AT3G44160.1	6.123e-114	48.33	\| Outer membrane OMP85 family protein \| Chr3:15889...	[more]
AT3G48620.1	1.270e-55	38.54	\| Outer membrane OMP85 family protein \| Chr3:18016...	[more]
AT5G19620.1	3.779e-41	32.20	\| outer envelope protein of 80 kDa \| Chr5:6623323-...	[more]
AT3G46740.1	5.855e-11	30.77	\| translocon at the outer envelope membrane of chl...	[more]
AT4G09080.3	7.076e-11	35.96	\| Outer membrane OMP85 family protein \| Chr4:58047...	[more]
AT4G09080.1	8.406e-11	35.96	\| Outer membrane OMP85 family protein \| Chr4:58044...	[more]
AT4G09080.2	8.915e-11	35.96	\| Outer membrane OMP85 family protein \| Chr4:58044...	[more]

BLAST of rna-XM_022785122.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
tr\|A0A3Q0FAK6\|A0A3Q0FAK6_VIGRR	0.000e+0	100.00	outer envelope protein 80, chloroplastic OS=Vigna ...	[more]
tr\|A0A4D6N392\|A0A4D6N392_VIGUN	0.000e+0	89.42	Outer membrane protein OS=Vigna unguiculata OX=391...	[more]
tr\|A0A0L9TJF2\|A0A0L9TJF2_PHAAN	0.000e+0	96.86	Omp85 domain-containing protein (Fragment) OS=Phas...	[more]
tr\|V7BHC1\|V7BHC1_PHAVU	0.000e+0	84.44	Omp85 domain-containing protein OS=Phaseolus vulga...	[more]
tr\|K7LH85\|K7LH85_SOYBN	0.000e+0	81.77	Omp85 domain-containing protein OS=Glycine max OX=...	[more]
tr\|A0A445IHE0\|A0A445IHE0_GLYSO	0.000e+0	81.49	Outer envelope protein 80, chloroplastic OS=Glycin...	[more]
tr\|A0A396JV45\|A0A396JV45_MEDTR	1.861e-143	58.40	Putative bacterial surface antigen (D15) OS=Medica...	[more]
tr\|A0A6A5NCQ7\|A0A6A5NCQ7_LUPAL	1.886e-141	57.73	Putative bacterial surface antigen (D15) OS=Lupinu...	[more]
tr\|A0A072VWU6\|A0A072VWU6_MEDTR	5.336e-139	58.81	Outer membrane OMP85 family protein OS=Medicago tr...	[more]
tr\|K7LH86\|K7LH86_SOYBN	3.992e-134	78.99	Uncharacterized protein OS=Glycine max OX=3847 GN=...	[more]

InterPro

Analysis Name: InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0
Date Performed: 2023-06-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.40.160.50	membrane protein fhac: a member of the omp85/tpsb transporter family	coord: 37..356 e-value: 1.7E-27 score: 98.7
IPR000184	Bacterial surface antigen (D15)	PFAM	PF01103	Omp85	coord: 201..344 e-value: 7.1E-19 score: 68.5
IPR039910	Surface antigen D15-like	PANTHER	PTHR12815	SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER	coord: 32..355

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr08:24263119..24266054-
coding sequence from alignment at chr08:24263119..24266054-

mRNA sequence

>rna-XM_022785122.1_VrVC1973A-SNU_v1 ID=rna-XM_022785122.1_VrVC1973A-SNU_v1; Name=rna-XM_022785122.1; organism=Vigna radiata; type=mRNA; length=1080bp
ATGGGAGCAAACAAAAGTGTCCACGTTGGAAGATCAAAGCTAGACATTGG
AGTTGATTTCACAAGAAGACTATGTAGTTCTGACATGAAGAGGCTGTCAA
GATGTCTGGTTTCTATGGCTACTGGCAGCCTTCGCTGGAAGCAGCCTGGT
CTAATTTATTACAGTGATTTGCTAGATATATCGTGGCACAAAGGGCTGCA
TGATTCAGACGTATTGGTCACGTATAGGTATCATAGACCTCGAGATATTG
GTCCCCCCTCCCTCACCATTAAGCATTCAGTTTCACCCGAGGTAAGAATC
CATGGAATTCCCATGAACAGTTTTCGCCATTCCCAAAGTCAAGGTGTAAG
ATTGTCCGAGTTGTCGATTGGGTTTGATTATGTCGAGCCTTCTGAATCTG
ATTCGACCAAAGGCAAAGCAACAGGTGTATACTTTAAGCGTTTTCACTTT
TCACACGATGGAGGCCGCTCTATAAGTACAGACCGAGATGGTTTTCAACT
GACTCGCAGTGGAAGTCCATCTGATAATGTGATAGCTGTTAGTCAAGAAT
CTCGATTTCAAGAGGAAAATGATAACAGTTTTACTAATTTCAGTGTCCAT
ATGGAACTAGGAACTGCAATTCCACCAACCTTGTTGACCTACTATCGGTT
TGAAGTTACTGCAGCAAGAGGAATCAAACTTGGACCAGCATTGTTTTTCT
CACGGATGAGTGGTGGAACTGTTAAGGGATCCTTTGCTCCATACCAAGCA
TTTGCAATCGGTGGTCCCAGTAGTGTGCGAGGCTATGGTGAAGGTGCCAT
TGGCGTTGGACAATCGTGTCTGCTATCCACAACTGAATTGTCAATCCCAT
TGAGCAAAAAACTAACAGGTGTTATCTTCCTGGACTGTGGGTCTGACCTG
TGGAGTAGTGATAAAGTTCCAAATAATCCAGGAGAGAGACATGGTAAGCC
TGGATTTGGATCTGGAATTGGGGTTGGCATTCGATTCAAAACCCCCTTGG
CTCATGTACAAGTTGATTATGCCATTAATGCCTTTCAAAAAGGAACTGCA
TATTTCGGAATTAGCGATCTGCTGATATAA

protein sequence of rna-XM_022785122.1_VrVC1973A-SNU_v1

>rna-XM_022785122.1_VrVC1973A-SNU_v1 ID=rna-XM_022785122.1_VrVC1973A-SNU_v1; Name=rna-XM_022785122.1_VrVC1973A-SNU_v1; organism=Vigna radiata; type=polypeptide; length=359bp
MGANKSVHVGRSKLDIGVDFTRRLCSSDMKRLSRCLVSMATGSLRWKQPG
LIYYSDLLDISWHKGLHDSDVLVTYRYHRPRDIGPPSLTIKHSVSPEVRI
HGIPMNSFRHSQSQGVRLSELSIGFDYVEPSESDSTKGKATGVYFKRFHF
SHDGGRSISTDRDGFQLTRSGSPSDNVIAVSQESRFQEENDNSFTNFSVH
MELGTAIPPTLLTYYRFEVTAARGIKLGPALFFSRMSGGTVKGSFAPYQA
FAIGGPSSVRGYGEGAIGVGQSCLLSTTELSIPLSKKLTGVIFLDCGSDL
WSSDKVPNNPGERHGKPGFGSGIGVGIRFKTPLAHVQVDYAINAFQKGTA
YFGISDLLI

mRNA from alignment at chr08:24263119..24266054-

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>rna-XM_022785122.1_VrVC1973A-SNU_v1 ID=rna-XM_022785122.1_VrVC1973A-SNU_v1; Name=rna-XM_022785122.1; organism=Vigna radiata; type=mRNA; length=2936bp; location=Sequence derived from: chr08:24263119..24266054- (Vigna radiata
TTCCTCATCAATTCTTGCAGTTGTTTGTACGAGGACTCAGAAGAAATGGG
AGCAAACAAAAGTGTCCACGTTGGAAGATGTTCGATTTTCTTCAAACTTC
CAGTTTTCTTATTCGTCATTTTCTTTTAGTATCTAGTTGGTTAACATTGC
ATATCATTAAATATTAATGTACCAAGTATGCATTTTGTGCATGGCAGCAA
AGCTAGACATTGGAGTTGATTTCACAAGAAGACTATGTAGTTCTGACATG
AAGAGGTTTTTGTCGATTCTATAACGTTTTGACAGCAAGAATATACTTAC
TAGTTCTTTTTATGTTTTTCTTTTTATCAGATCAGATCATATAATCTACA
AATCTATTATATTAATTTTTTTTTCTAAGTGTATATTACGAGTTGATGAA
CTTTTTTGTGTATGTAAATGATATTTCTATCTTGTGATGGTGTTTTTCAT
GAACAGGCTGTCAAGATGTCTGGTTTCTATGGCTACTGGCAGGTACAAGT
TTGGTTTGGTTTCTAACTTTTGTATTCGCAGTGACATCAAATTGGGTATA
TATATAACCAGAATTTCTTTGATGACAGCCTTCGCTGGAAGCAGCCTGGT
CTAATTTATTACAGTGATTTGCTAGATATATCGTGGCACAAAGGGCTGCA
TGATTCAGACGTATTGGTCACGTATAGGTATCATAGACCTCGAGATATTG
GTCCCCCCTCCCTCACCATTAAGGTTTGTACTTGTTGATTATTTCTTCAT
AATTAACTAATCTTTCTATAAATTTTAGTAGCATAATATTTTACTTTGTA
AAATGTTCATTTTTGTAACAATATTTTCTTAGAGATGTATATTGTGAATT
AAGCTTTTATCATCATATGTTTGTGAGATACTTGCTAAACTTGAGGTGGT
TTTTCTTTTCACCGTAACACAATGGCATTGAAGTTTTTTTCTTTATAGCA
TTCAGTTTCACCCGAGGTAAGAATCCATGGAATTCCCATGAACAGTTTTC
GCCATTCCCAAAGTCAAGGTGTAAGATTGTCCGAGTTGTCGATTGGGTTT
GATTATGTCGAGCCTTCTGAATCTGATTCGACCAAAGGCAAAGCAACAGG
TGTATACTTTAAGGTTGGAGGAGTCAGTTAATACTGGTTTTCGTTCATTC
TTATTCTTACCTTGCAATTTCTTATCATGCATGCGTTTCTCTAACGTAGA
GAATATTCTCTGTCATCTTTGTTGTGTTTGATCAATTGTGCAGCGTTTTC
ACTTTTCACACGATGGAGGCCGCTCTATAAGTACAGACCGAGATGGTTTT
CAACTGACTCGCAGGTTGCTGAGATTTGTTGTTTCAGACCTCACAAAATT
CGCCTGTTTCAATAATTTTGACTTACAACGTCTTCTTAAATTCCTCGTAG
TGGAAGTCCATCTGATAATGTGATAGCTGTTAGTCAAGAATCTCGATTTC
AAGAGGAAAATGATAACAGTTTTACTAATGTAAGTAATTAATTTTATCCA
AACTGAGAAATTAAATCTTCCTTATTCAATTTGTGAGCATTATTTGTGTG
CAAGTTATATCTAGTTTATTCACTGGTTGTTTGTATTCAGTTCAGTGTCC
ATATGGAACTAGGAACTGCAATTCCACCAACCTTGTTGACCTACTATCGG
TTTGAAGTTACTGCAGCAAGAGGAATCAAACTTGGACCAGCATTGTTTTT
CTCACGGTGAGTTCTTTCTCTTTGTTCAGTATACGCATTCCTTCCTTCGC
ACTAGTTAACCTGCATCAGTTTTGCAATATATTGTGACAGGATGAGTGGT
GGAACTGTTAAGGGATCCTTTGCTCCATACCAAGCATTTGCAATCGGTGG
TCCCAGTAGTGTGCGAGGCTATGGTGAAGGTGCCATTGGCGTTGGACAAT
CGTGTCTGCTATCCACAACTGAATTGTCAATCCCATTGGTATAATTTGCT
CAGCTTGATTCACAGATAATATTATACCTCTTCTATGTATTTTTCTCTTT
GCAAGAAGCATCTTTTTCTCAATACTATTGCCTCTGTTATGTAATGTCAG
TGTTTTGAGATTCTGAAAGGAATACTCTATGAGTAGAAAAAAAGTGAAGA
TAGAAGAATGTAAAAGTAGTAGTTAAAAAAATGTATTTGTAGTTATCATA
TTTTTTAGTAGTTGTTTTTGCTCTGATGAGTACATGGATATATTTATAGA
CTCATAAATTATTTTAAAATATTAATAACAATTTATATGGAATGTTCTTT
AATATATATAAATAAAAGATCACCGTGAATCATTTCTAAACATTTCTAGC
GATTATTGTTTGCTGATTAATCAGCTTTTTCTACACTATTTGCAGAGCAA
AAAACTAACAGGTGTTATCTTCCTGGACTGTGGGTCTGACCTGTGGAGTA
GTGATAAAGTTCCAAGTGAGTTTCCTTTAATCATTCAGAAGTCCAGCTTC
CAAGTTTATCTCTGCAAAAGTTTGGCCACAATAAGCCATGTTAGCATTCT
TAGTAGCCTTTTGTTCTGTTTTGACCATTTAACATTCTATCTCCAAACAA
CACAAGATTGTATTCCTAACTCTATTGGCTGTTAAGTTAATCGTTTTCTT
GTCCCTCACCTTTGCCATTATATCTATGACCATGACTTGTTTAACTCTTG
AGATGTGTAAGGTTGTATTGTTACGTTTAATTGCAGATAATCCAGGAGAG
AGACATGGTAAGCCTGGATTTGGATCTGGAATTGGGGTTGGCATTCGATT
CAAAACCCCCTTGGCTCATGTACAAGTTGATTATGCCATTAATGCCTTTC
AAAAAGGAACTGCATATTTCGGAATTAGCGATCTGCTGATATAAAAACTG
ACACTGCATAATTTGGCAATTTTTGTCTAATCTTTAATTTGATTATAAAA
GGTGATACAAATACACATGTCAAAATCCCTCTACAC

Coding sequence (CDS) from alignment at chr08:24263119..24266054-

>rna-XM_022785122.1_VrVC1973A-SNU_v1 ID=rna-XM_022785122.1_VrVC1973A-SNU_v1; Name=rna-XM_022785122.1; organism=Vigna radiata; type=CDS; length=1080bp; location=Sequence derived from: chr08:24263119..24266054- (Vigna radiata
ATGGGAGCAAACAAAAGTGTCCACGTTGGAAGATCAAAGCTAGACATTGG
AGTTGATTTCACAAGAAGACTATGTAGTTCTGACATGAAGAGGCTGTCAA
GATGTCTGGTTTCTATGGCTACTGGCAGCCTTCGCTGGAAGCAGCCTGGT
CTAATTTATTACAGTGATTTGCTAGATATATCGTGGCACAAAGGGCTGCA
TGATTCAGACGTATTGGTCACGTATAGGTATCATAGACCTCGAGATATTG
GTCCCCCCTCCCTCACCATTAAGCATTCAGTTTCACCCGAGGTAAGAATC
CATGGAATTCCCATGAACAGTTTTCGCCATTCCCAAAGTCAAGGTGTAAG
ATTGTCCGAGTTGTCGATTGGGTTTGATTATGTCGAGCCTTCTGAATCTG
ATTCGACCAAAGGCAAAGCAACAGGTGTATACTTTAAGCGTTTTCACTTT
TCACACGATGGAGGCCGCTCTATAAGTACAGACCGAGATGGTTTTCAACT
GACTCGCAGTGGAAGTCCATCTGATAATGTGATAGCTGTTAGTCAAGAAT
CTCGATTTCAAGAGGAAAATGATAACAGTTTTACTAATTTCAGTGTCCAT
ATGGAACTAGGAACTGCAATTCCACCAACCTTGTTGACCTACTATCGGTT
TGAAGTTACTGCAGCAAGAGGAATCAAACTTGGACCAGCATTGTTTTTCT
CACGGATGAGTGGTGGAACTGTTAAGGGATCCTTTGCTCCATACCAAGCA
TTTGCAATCGGTGGTCCCAGTAGTGTGCGAGGCTATGGTGAAGGTGCCAT
TGGCGTTGGACAATCGTGTCTGCTATCCACAACTGAATTGTCAATCCCAT
TGAGCAAAAAACTAACAGGTGTTATCTTCCTGGACTGTGGGTCTGACCTG
TGGAGTAGTGATAAAGTTCCAAATAATCCAGGAGAGAGACATGGTAAGCC
TGGATTTGGATCTGGAATTGGGGTTGGCATTCGATTCAAAACCCCCTTGG
CTCATGTACAAGTTGATTATGCCATTAATGCCTTTCAAAAAGGAACTGCA
TATTTCGGAATTAGCGATCTGCTGATATAA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000184	Bac_surfAg_D15
IPR039910	D15-like

Vocabulary: **Cellular Component**
Term	Definition
GO:0019867	outer membrane

Search form

rna-XM_022785122.1