rna-XM_022785201.1

Transcript Overview


Name	rna-XM_022785201.1
Unique Name	rna-XM_022785201.1_VrVC1973A-SNU_v1
Type	mRNA
Organism	Vigna radiata (Mung bean, green gram)
Sequence length	939
Product	phosphoglycerate mutase-like protein AT74, transcript variant X2

References

External references for this mRNA


Database	Accession
GeneID	106772057
Genbank	XM_022785201.1

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
chr08	chromosome	chr08:32318073..32322290 -	Vigna radiata cv. VC1973A genome v6.0	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Vigna radiata cv. VC1973A genome v6.0	2023-06-13
InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0	2023-06-20
Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot	2023-06-20
Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11	2023-06-20
Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL	2023-06-20

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
asvrvL186	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
asvrvL252	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
anvrvL0432	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anvrvL0617	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anvrvL0655	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anvrvL1112	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
caivrvL286	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
caivrvL433	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
cavrvL231	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
cavrvL361	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
ccvrvL0646	Cajanus cajan Asha genome v1.0	Cajanus cajan
crvrvL403	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
crvrvL409	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
psvrvL236	Pisum sativum Cameor genome v1a	Pisum sativum
psvrvL561	Pisum sativum Cameor genome v1a	Pisum sativum
pvvrvL523	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
pvvrvL568	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
tifvrvL411	Vicia faba cv. Tiffany genome v1.0	Vicia faba
tifvrvL601	Vicia faba cv. Tiffany genome v1.0	Vicia faba
vrvvrvL044	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
vfhvrvL425	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
vfhvrvL608	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
vrvvssR790	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
vrvvssR830	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
vrvzwsR640	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
vrvzwsR681	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
vrvvuaR571	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
vrvvuR619	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
vrvvuaR589	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
vrvvuR621	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
canvrvL211	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
canvrvL335	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
avjvrvL119	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
avjvrvL300	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
carvrvL216		Cicer arietinum
carvrvL331		Cicer arietinum
ccavrvL236	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
ccavrvL363	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
vrvvumR626	Vigna umbellata FF25 genome v1.0	Vigna umbellata
vrvvumR690	Vigna umbellata FF25 genome v1.0	Vigna umbellata
vrvvvaR719	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
vrvvvaR749	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
vrvvvaR791	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
vrvvstR665	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
vrvvstR680	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
vasvrvL459	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
vasvrvL589	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
pvfvrvL483	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
pvfvrvL529	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
vrvvunR579	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
vrvvunR581	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
gene-LOC106772057	gene-LOC106772057_VrVC1973A-SNU_v1	Vigna radiata	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
rna-XM_022785201.1_VrVC1973A-SNU_v1	rna-XM_022785201.1_VrVC1973A-SNU_v1	Vigna radiata	polypeptide
rna-XM_022785201.1_VrVC1973A-SNU_v1	rna-XM_022785201.1_VrVC1973A-SNU_v1-protein	Vigna radiata	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
exon-XM_022785201.1-3	exon-XM_022785201.1-3_VrVC1973A-SNU_v1	Vigna radiata	exon
exon-XM_022785201.1-2	exon-XM_022785201.1-2_VrVC1973A-SNU_v1	Vigna radiata	exon
exon-XM_022785201.1-1	exon-XM_022785201.1-1_VrVC1973A-SNU_v1	Vigna radiata	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
cds-XP_022640922.1	cds-XP_022640922.1_VrVC1973A-SNU_v1_3	Vigna radiata	CDS
cds-XP_022640922.1	cds-XP_022640922.1_VrVC1973A-SNU_v1_2	Vigna radiata	CDS
cds-XP_022640922.1	cds-XP_022640922.1_VrVC1973A-SNU_v1	Vigna radiata	CDS

Homology

[Close]

BLAST of rna-XM_022785201.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9MAA2|AT74_ARATH (Phosphoglycerate mutase-like protein AT74 OS=Arabidopsis thaliana OX=3702 GN=At3g05170 PE=2 SV=1)

HSP 1 Score: 432.95 bits (1112), Expect = 1.670e-152
Identity = 202/270 (74.81%), Postives = 230/270 (85.19%), Query Frame = 0

Query:    4 VLPKRIILMRHGESHGNRDTAAYTTTPDHSIHLTAQGVAQARQAGVRLRRVIGGDGCSPDWRVQFYVSPYARTRSTLREVGRCFSKKRIIGVREESRIREQDFGNFQVEERMTVIKEARERFGRFFYRFPEGESAADVFDRVSSFFESLWRDIDMNRLRHDPSNDLNFVIVSHGLTSRIFLMKWFKWTVEQFEVLNNFGNCEFRVMELGSGGEYSLAVHHTEEEMLEWGLSPEMIADQKWRATACRGDWNDQCPWYLGEFFDHLTDSDDD 273
            +LPKRIIL+RHGES GN DTAAYTTTPDH I LT  G+ QA++AG RL  +I  +  SP+WRV FYVSPY RTRSTLRE+GR FS++R+IGVREE RIREQDFGNFQV+ERM   K+ RERFGRFFYRFPEGESAADVFDRVSSF ESLWRDIDMNRL  +PS++LNFVIVSHGLTSR+FLMKWFKW+VEQFE LNN GN E RVMELG GG+YSLA+HHTEEE+  WGLSPEMIADQKWRA A +G+W + C WY G+FFDH+ DSD +
Sbjct:    7 LLPKRIILVRHGESEGNLDTAAYTTTPDHKIQLTDSGLLQAQEAGARLHALISSNPSSPEWRVYFYVSPYDRTRSTLREIGRSFSRRRVIGVREECRIREQDFGNFQVKERMRATKKVRERFGRFFYRFPEGESAADVFDRVSSFLESLWRDIDMNRLHINPSHELNFVIVSHGLTSRVFLMKWFKWSVEQFEGLNNPGNSEIRVMELGQGGDYSLAIHHTEEELATWGLSPEMIADQKWRANAHKGEWKEDCKWYFGDFFDHMADSDKE 276

[Close]

BLAST of rna-XM_022785201.1 vs. UniProtKB/Swiss-Prot
Match: sp|O04035|AT74H_ARATH (Phosphoglycerate mutase-like protein AT74H OS=Arabidopsis thaliana OX=3702 GN=At1g08940 PE=3 SV=2)

HSP 1 Score: 402.905 bits (1034), Expect = 3.454e-141
Identity = 193/277 (69.68%), Postives = 225/277 (81.23%), Query Frame = 0

Query:    2 KGVLPKRIILMRHGESHGNRDTAAYTTTPDHSIHLTAQGVAQARQAGVRLRRVIG---GDGCSPDWRVQFYVSPYARTRSTLREVGRCFSKKRIIGVREESRIREQDFGNFQVEERMTVIKEARERFGRFFYRFPEGESAADVFDRVSSFFESLWRDIDMNRLRHDPSNDLNFVIVSHGLTSRIFLMKWFKWTVEQFEVLNNFGNCEFRVMELGSGGEYSLAVHHTEEEMLEWGLSPEMIADQKWRATACR-GDWNDQCPWYLGEFFDHLTDSDDDD 274
            K +LPKRIILMRHGES GN D  AY TTPDH I LT +G AQAR+AG ++R +I    G  C  +WRV FYVSPY RTR+TLREVG+ FS+KR+IGVREE RIREQDFGNFQVEERM V+KE RERFGRFFYRFPEGESAADV+DRVSSF ES+WRD+DMNR + DPS++LN VIVSHGLTSR+FL KWFKWTV +FE LNNFGNCEFRVMELG+ GEY+ A+HH+EEEML+WG+S +MI DQK R   CR    ND C  +L E+FD L  +DD++
Sbjct:    5 KKMLPKRIILMRHGESAGNIDAGAYATTPDHKIPLTEEGRAQAREAGKKMRALISTQSGGACGENWRVYFYVSPYERTRTTLREVGKGFSRKRVIGVREECRIREQDFGNFQVEERMRVVKETRERFGRFFYRFPEGESAADVYDRVSSFLESMWRDVDMNRHQVDPSSELNLVIVSHGLTSRVFLTKWFKWTVAEFERLNNFGNCEFRVMELGASGEYTFAIHHSEEEMLDWGMSKDMIDDQKDRVDGCRVTTSNDSCSLHLNEYFDLLDVTDDEE 281

[Close]

BLAST of rna-XM_022785201.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q99288|DET1_YEAST (Broad-range acid phosphatase DET1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=DET1 PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.757e-31
Identity = 64/128 (50.00%), Postives = 86/128 (67.19%), Query Frame = 0

Query:   84 GRCFSKKRIIGVREESRIREQDFGNFQVEERMTVIKEARERFGRFFYRFPEGESAADVFDRVSSFFESLWRDIDMNRLRHDPSNDLNFVIVSHGLTSRIFLMKWFKWTVEQFEVLNNFGNCEFRVMEL 211
            G+C+ + R   V++E RIREQDFGNFQ    M  + + R  +G FF+RFP GESAADV+DRV+SF E+L+R    +R    P + +  V+V+HG+ SR+FLMKWF+WT E+FE   N  N    VMEL
Sbjct:  188 GKCYLQYR---VKDEPRIREQDFGNFQKINSMQDVMKKRSTYGHFFFRFPHGESAADVYDRVASFQETLFRHF-HDRQERRPRDVV--VLVTHGIYSRVFLMKWFRWTYEEFESFTNVPNGSVMVMEL 309

[Close]

BLAST of rna-XM_022785201.1 vs. Araport11
Match: AT3G05170.1 (| Phosphoglycerate mutase family protein | Chr3:1466738-1468219 FORWARD LENGTH=316 | 201606)

HSP 1 Score: 432.95 bits (1112), Expect = 1.708e-153
Identity = 202/270 (74.81%), Postives = 230/270 (85.19%), Query Frame = 0

Query:    4 VLPKRIILMRHGESHGNRDTAAYTTTPDHSIHLTAQGVAQARQAGVRLRRVIGGDGCSPDWRVQFYVSPYARTRSTLREVGRCFSKKRIIGVREESRIREQDFGNFQVEERMTVIKEARERFGRFFYRFPEGESAADVFDRVSSFFESLWRDIDMNRLRHDPSNDLNFVIVSHGLTSRIFLMKWFKWTVEQFEVLNNFGNCEFRVMELGSGGEYSLAVHHTEEEMLEWGLSPEMIADQKWRATACRGDWNDQCPWYLGEFFDHLTDSDDD 273
            +LPKRIIL+RHGES GN DTAAYTTTPDH I LT  G+ QA++AG RL  +I  +  SP+WRV FYVSPY RTRSTLRE+GR FS++R+IGVREE RIREQDFGNFQV+ERM   K+ RERFGRFFYRFPEGESAADVFDRVSSF ESLWRDIDMNRL  +PS++LNFVIVSHGLTSR+FLMKWFKW+VEQFE LNN GN E RVMELG GG+YSLA+HHTEEE+  WGLSPEMIADQKWRA A +G+W + C WY G+FFDH+ DSD +
Sbjct:    7 LLPKRIILVRHGESEGNLDTAAYTTTPDHKIQLTDSGLLQAQEAGARLHALISSNPSSPEWRVYFYVSPYDRTRSTLREIGRSFSRRRVIGVREECRIREQDFGNFQVKERMRATKKVRERFGRFFYRFPEGESAADVFDRVSSFLESLWRDIDMNRLHINPSHELNFVIVSHGLTSRVFLMKWFKWSVEQFEGLNNPGNSEIRVMELGQGGDYSLAIHHTEEELATWGLSPEMIADQKWRANAHKGEWKEDCKWYFGDFFDHMADSDKE 276

[Close]

BLAST of rna-XM_022785201.1 vs. Araport11
Match: AT1G08940.1 (| Phosphoglycerate mutase family protein | Chr1:2877694-2879104 FORWARD LENGTH=281 | 201606)

HSP 1 Score: 402.905 bits (1034), Expect = 3.533e-142
Identity = 193/277 (69.68%), Postives = 225/277 (81.23%), Query Frame = 0

Query:    2 KGVLPKRIILMRHGESHGNRDTAAYTTTPDHSIHLTAQGVAQARQAGVRLRRVIG---GDGCSPDWRVQFYVSPYARTRSTLREVGRCFSKKRIIGVREESRIREQDFGNFQVEERMTVIKEARERFGRFFYRFPEGESAADVFDRVSSFFESLWRDIDMNRLRHDPSNDLNFVIVSHGLTSRIFLMKWFKWTVEQFEVLNNFGNCEFRVMELGSGGEYSLAVHHTEEEMLEWGLSPEMIADQKWRATACR-GDWNDQCPWYLGEFFDHLTDSDDDD 274
            K +LPKRIILMRHGES GN D  AY TTPDH I LT +G AQAR+AG ++R +I    G  C  +WRV FYVSPY RTR+TLREVG+ FS+KR+IGVREE RIREQDFGNFQVEERM V+KE RERFGRFFYRFPEGESAADV+DRVSSF ES+WRD+DMNR + DPS++LN VIVSHGLTSR+FL KWFKWTV +FE LNNFGNCEFRVMELG+ GEY+ A+HH+EEEML+WG+S +MI DQK R   CR    ND C  +L E+FD L  +DD++
Sbjct:    5 KKMLPKRIILMRHGESAGNIDAGAYATTPDHKIPLTEEGRAQAREAGKKMRALISTQSGGACGENWRVYFYVSPYERTRTTLREVGKGFSRKRVIGVREECRIREQDFGNFQVEERMRVVKETRERFGRFFYRFPEGESAADVYDRVSSFLESMWRDVDMNRHQVDPSSELNLVIVSHGLTSRVFLTKWFKWTVAEFERLNNFGNCEFRVMELGASGEYTFAIHHSEEEMLDWGMSKDMIDDQKDRVDGCRVTTSNDSCSLHLNEYFDLLDVTDDEE 281

[Close]

BLAST of rna-XM_022785201.1 vs. UniProtKB/TrEMBL
Match: tr|A0A3Q0FEY8|A0A3Q0FEY8_VIGRR (phosphoglycerate mutase-like protein AT74H isoform X2 OS=Vigna radiata var. radiata OX=3916 GN=LOC106772057 PE=4 SV=1)

HSP 1 Score: 650.203 bits (1676), Expect = 0.000e+0
Identity = 312/312 (100.00%), Postives = 312/312 (100.00%), Query Frame = 0

Query:    1 MKGVLPKRIILMRHGESHGNRDTAAYTTTPDHSIHLTAQGVAQARQAGVRLRRVIGGDGCSPDWRVQFYVSPYARTRSTLREVGRCFSKKRIIGVREESRIREQDFGNFQVEERMTVIKEARERFGRFFYRFPEGESAADVFDRVSSFFESLWRDIDMNRLRHDPSNDLNFVIVSHGLTSRIFLMKWFKWTVEQFEVLNNFGNCEFRVMELGSGGEYSLAVHHTEEEMLEWGLSPEMIADQKWRATACRGDWNDQCPWYLGEFFDHLTDSDDDDDPVENEGLENRISFAHSSTFTISLMFYVGGFHSHKERN 312
            MKGVLPKRIILMRHGESHGNRDTAAYTTTPDHSIHLTAQGVAQARQAGVRLRRVIGGDGCSPDWRVQFYVSPYARTRSTLREVGRCFSKKRIIGVREESRIREQDFGNFQVEERMTVIKEARERFGRFFYRFPEGESAADVFDRVSSFFESLWRDIDMNRLRHDPSNDLNFVIVSHGLTSRIFLMKWFKWTVEQFEVLNNFGNCEFRVMELGSGGEYSLAVHHTEEEMLEWGLSPEMIADQKWRATACRGDWNDQCPWYLGEFFDHLTDSDDDDDPVENEGLENRISFAHSSTFTISLMFYVGGFHSHKERN
Sbjct:    1 MKGVLPKRIILMRHGESHGNRDTAAYTTTPDHSIHLTAQGVAQARQAGVRLRRVIGGDGCSPDWRVQFYVSPYARTRSTLREVGRCFSKKRIIGVREESRIREQDFGNFQVEERMTVIKEARERFGRFFYRFPEGESAADVFDRVSSFFESLWRDIDMNRLRHDPSNDLNFVIVSHGLTSRIFLMKWFKWTVEQFEVLNNFGNCEFRVMELGSGGEYSLAVHHTEEEMLEWGLSPEMIADQKWRATACRGDWNDQCPWYLGEFFDHLTDSDDDDDPVENEGLENRISFAHSSTFTISLMFYVGGFHSHKERN 312

[Close]

BLAST of rna-XM_022785201.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3V5R6|A0A1S3V5R6_VIGRR (GDSL esterase/lipase At1g54790 isoform X1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106772057 PE=3 SV=2)

HSP 1 Score: 594.734 bits (1532), Expect = 0.000e+0
Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 0

Query:    1 MKGVLPKRIILMRHGESHGNRDTAAYTTTPDHSIHLTAQGVAQARQAGVRLRRVIGGDGCSPDWRVQFYVSPYARTRSTLREVGRCFSKKRIIGVREESRIREQDFGNFQVEERMTVIKEARERFGRFFYRFPEGESAADVFDRVSSFFESLWRDIDMNRLRHDPSNDLNFVIVSHGLTSRIFLMKWFKWTVEQFEVLNNFGNCEFRVMELGSGGEYSLAVHHTEEEMLEWGLSPEMIADQKWRATACRGDWNDQCPWYLGEFFDHLTDSDDDDDPVENE 280
            MKGVLPKRIILMRHGESHGNRDTAAYTTTPDHSIHLTAQGVAQARQAGVRLRRVIGGDGCSPDWRVQFYVSPYARTRSTLREVGRCFSKKRIIGVREESRIREQDFGNFQVEERMTVIKEARERFGRFFYRFPEGESAADVFDRVSSFFESLWRDIDMNRLRHDPSNDLNFVIVSHGLTSRIFLMKWFKWTVEQFEVLNNFGNCEFRVMELGSGGEYSLAVHHTEEEMLEWGLSPEMIADQKWRATACRGDWNDQCPWYLGEFFDHLTDSDDDDDPVENE
Sbjct:    1 MKGVLPKRIILMRHGESHGNRDTAAYTTTPDHSIHLTAQGVAQARQAGVRLRRVIGGDGCSPDWRVQFYVSPYARTRSTLREVGRCFSKKRIIGVREESRIREQDFGNFQVEERMTVIKEARERFGRFFYRFPEGESAADVFDRVSSFFESLWRDIDMNRLRHDPSNDLNFVIVSHGLTSRIFLMKWFKWTVEQFEVLNNFGNCEFRVMELGSGGEYSLAVHHTEEEMLEWGLSPEMIADQKWRATACRGDWNDQCPWYLGEFFDHLTDSDDDDDPVENE 280

[Close]

BLAST of rna-XM_022785201.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3V8V0|A0A1S3V8V0_VIGRR (phosphoglycerate mutase-like protein AT74 isoform X3 OS=Vigna radiata var. radiata OX=3916 GN=LOC106772057 PE=4 SV=2)

HSP 1 Score: 585.104 bits (1507), Expect = 0.000e+0
Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 0

Query:    1 MKGVLPKRIILMRHGESHGNRDTAAYTTTPDHSIHLTAQGVAQARQAGVRLRRVIGGDGCSPDWRVQFYVSPYARTRSTLREVGRCFSKKRIIGVREESRIREQDFGNFQVEERMTVIKEARERFGRFFYRFPEGESAADVFDRVSSFFESLWRDIDMNRLRHDPSNDLNFVIVSHGLTSRIFLMKWFKWTVEQFEVLNNFGNCEFRVMELGSGGEYSLAVHHTEEEMLEWGLSPEMIADQKWRATACRGDWNDQCPWYLGEFFDHLTDSDDDDDPVENE 280
            MKGVLPKRIILMRHGESHGNRDTAAYTTTPDHSIHLTAQGVAQARQAGVRLRRVIGGDGCSPDWRVQFYVSPYARTRSTLREVGRCFSKKRIIGVREESRIREQDFGNFQVEERMTVIKEARERFGRFFYRFPEGESAADVFDRVSSFFESLWRDIDMNRLRHDPSNDLNFVIVSHGLTSRIFLMKWFKWTVEQFEVLNNFGNCEFRVMELGSGGEYSLAVHHTEEEMLEWGLSPEMIADQKWRATACRGDWNDQCPWYLGEFFDHLTDSDDDDDPVENE
Sbjct:    1 MKGVLPKRIILMRHGESHGNRDTAAYTTTPDHSIHLTAQGVAQARQAGVRLRRVIGGDGCSPDWRVQFYVSPYARTRSTLREVGRCFSKKRIIGVREESRIREQDFGNFQVEERMTVIKEARERFGRFFYRFPEGESAADVFDRVSSFFESLWRDIDMNRLRHDPSNDLNFVIVSHGLTSRIFLMKWFKWTVEQFEVLNNFGNCEFRVMELGSGGEYSLAVHHTEEEMLEWGLSPEMIADQKWRATACRGDWNDQCPWYLGEFFDHLTDSDDDDDPVENE 280

[Close]

BLAST of rna-XM_022785201.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6N0V1|A0A4D6N0V1_VIGUN (Phosphoglycerate mutase OS=Vigna unguiculata OX=3917 GN=DEO72_LG9g2395 PE=4 SV=1)

HSP 1 Score: 555.058 bits (1429), Expect = 0.000e+0
Identity = 275/293 (93.86%), Postives = 281/293 (95.90%), Query Frame = 0

Query:    1 MKGVLPKRIILMRHGESHGNRDTAAYTTTPDHSIHLTAQGVAQARQAGVRLRRVIGGDGCSPDWRVQFYVSPYARTRSTLREVGRCFSKKRIIGVREESRIREQDFGNFQVEERMTVIKEARERFGRFFYRFPEGESAADVFDRVSSFFESLWRDIDMNRLRHDPSNDLNFVIVSHGLTSRIFLMKWFKWTVEQFEVLNNFGNCEFRVMELGSGGEYSLAVHHTEEEMLEWGLSPEMIADQKWRATACRGDWNDQCPWYLGEFFDHLTDSDDDDD----PVENEGLENRISFA 289
            MKGVLPKRIILMRHGES GNRDTAAYTTTPDHSIHLTAQGVAQARQAG+RLRRVIGGDGCSPDWRVQFYVSPYARTRSTLREVGRCFSKKR+IGVREESRIREQDFGNFQVEERM VIKEARERFGRFFYRFPEGESAADVFDRVSSFFESLWRDIDMNRLRHDPSNDLNFVIVSHGLTSRIFLMKWFKWTVEQFE LNNFGNCEFRVMELGSGGE+SLA+HHTEEEMLEWGLSPEMIADQKWRATACRGDWNDQCPWYLGEFFDHLTDSDDDDD    PV+NEG  N +S  
Sbjct:    1 MKGVLPKRIILMRHGESQGNRDTAAYTTTPDHSIHLTAQGVAQARQAGIRLRRVIGGDGCSPDWRVQFYVSPYARTRSTLREVGRCFSKKRMIGVREESRIREQDFGNFQVEERMKVIKEARERFGRFFYRFPEGESAADVFDRVSSFFESLWRDIDMNRLRHDPSNDLNFVIVSHGLTSRIFLMKWFKWTVEQFEHLNNFGNCEFRVMELGSGGEFSLAIHHTEEEMLEWGLSPEMIADQKWRATACRGDWNDQCPWYLGEFFDHLTDSDDDDDNDDAPVKNEGDPNSLSIC 293

[Close]

BLAST of rna-XM_022785201.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3SQ98|A0A0S3SQ98_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.08G167900 PE=4 SV=1)

HSP 1 Score: 550.051 bits (1416), Expect = 0.000e+0
Identity = 275/288 (95.49%), Postives = 277/288 (96.18%), Query Frame = 0

Query:    1 MKGVLPKRIILMRHGESHGNRDTAAYTTTPDHSIHLTAQGVAQARQAGVRLRRVIGGDGCSPDWRVQFYVSPYARTRSTLREVGRCFSKKRIIGVREESRIREQDFGNFQVEERMTVIKEARERFGRFFYRFPEGESAADVFDRVSSFFESLWRDIDMNRLRHDPSNDLNFVIVSHGLTSRIFLMKWFKWTVEQFEVLNNFGNCEFRVMELGSGGEYSLAVHHTEEEMLEWGLSPEMIADQKWRATACRGDWNDQCPWYLGEFFDHLTDSDDDDD-PVENEGLENRIS 287
            MKGVLPKRIILMRHGES GNRD AAYTTTPDHSIHLTAQGV QARQAGVRLRRVIGGDGCS DWRVQFYVSPYARTRSTLREVGRCFSKKRIIGVREESRIREQDFGNFQ EERM VIKEARERFGRFFYRFPEGESAADVFDRVSSFFESLWRDIDMNRLRHDPSNDLNFVIVSHGLTSRIFLMKWFKWTVEQFEVLNNFGNCEFRVMELG+GGEYSLAVHHTEEEMLEWGLSPEMIADQKWRATA RGDWNDQCPWYLGEFFDHLTDSDDDDD PVENEG  N +S
Sbjct:    1 MKGVLPKRIILMRHGESQGNRDMAAYTTTPDHSIHLTAQGVGQARQAGVRLRRVIGGDGCSSDWRVQFYVSPYARTRSTLREVGRCFSKKRIIGVREESRIREQDFGNFQEEERMKVIKEARERFGRFFYRFPEGESAADVFDRVSSFFESLWRDIDMNRLRHDPSNDLNFVIVSHGLTSRIFLMKWFKWTVEQFEVLNNFGNCEFRVMELGNGGEYSLAVHHTEEEMLEWGLSPEMIADQKWRATASRGDWNDQCPWYLGEFFDHLTDSDDDDDAPVENEGDPNSLS 288

[Close]

BLAST of rna-XM_022785201.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9VJG0|A0A0L9VJG0_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan10g092900 PE=4 SV=1)

HSP 1 Score: 550.051 bits (1416), Expect = 0.000e+0
Identity = 275/288 (95.49%), Postives = 277/288 (96.18%), Query Frame = 0

Query:    1 MKGVLPKRIILMRHGESHGNRDTAAYTTTPDHSIHLTAQGVAQARQAGVRLRRVIGGDGCSPDWRVQFYVSPYARTRSTLREVGRCFSKKRIIGVREESRIREQDFGNFQVEERMTVIKEARERFGRFFYRFPEGESAADVFDRVSSFFESLWRDIDMNRLRHDPSNDLNFVIVSHGLTSRIFLMKWFKWTVEQFEVLNNFGNCEFRVMELGSGGEYSLAVHHTEEEMLEWGLSPEMIADQKWRATACRGDWNDQCPWYLGEFFDHLTDSDDDDD-PVENEGLENRIS 287
            MKGVLPKRIILMRHGES GNRD AAYTTTPDHSIHLTAQGV QARQAGVRLRRVIGGDGCS DWRVQFYVSPYARTRSTLREVGRCFSKKRIIGVREESRIREQDFGNFQ EERM VIKEARERFGRFFYRFPEGESAADVFDRVSSFFESLWRDIDMNRLRHDPSNDLNFVIVSHGLTSRIFLMKWFKWTVEQFEVLNNFGNCEFRVMELG+GGEYSLAVHHTEEEMLEWGLSPEMIADQKWRATA RGDWNDQCPWYLGEFFDHLTDSDDDDD PVENEG  N +S
Sbjct:    1 MKGVLPKRIILMRHGESQGNRDMAAYTTTPDHSIHLTAQGVGQARQAGVRLRRVIGGDGCSSDWRVQFYVSPYARTRSTLREVGRCFSKKRIIGVREESRIREQDFGNFQEEERMKVIKEARERFGRFFYRFPEGESAADVFDRVSSFFESLWRDIDMNRLRHDPSNDLNFVIVSHGLTSRIFLMKWFKWTVEQFEVLNNFGNCEFRVMELGNGGEYSLAVHHTEEEMLEWGLSPEMIADQKWRATASRGDWNDQCPWYLGEFFDHLTDSDDDDDAPVENEGDPNSLS 288

[Close]

BLAST of rna-XM_022785201.1 vs. UniProtKB/TrEMBL
Match: tr|A0A371HUY1|A0A371HUY1_MUCPR (Phosphoglycerate mutase-like protein AT74 (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_09381 PE=4 SV=1)

HSP 1 Score: 534.258 bits (1375), Expect = 0.000e+0
Identity = 251/287 (87.46%), Postives = 265/287 (92.33%), Query Frame = 0

Query:    1 MKGVLPKRIILMRHGESHGNRDTAAYTTTPDHSIHLTAQGVAQARQAGVRLRRVIGGDGCSPDWRVQFYVSPYARTRSTLREVGRCFSKKRIIGVREESRIREQDFGNFQVEERMTVIKEARERFGRFFYRFPEGESAADVFDRVSSFFESLWRDIDMNRLRHDPSNDLNFVIVSHGLTSRIFLMKWFKWTVEQFEVLNNFGNCEFRVMELGSGGEYSLAVHHTEEEMLEWGLSPEMIADQKWRATACRGDWNDQCPWYLGEFFDHLTDSDDDDDPVENEGLENRIS 287
            M   LPKRIILMRHGES GN DTAAYTTTPDHSI LTAQG+AQAR AG  LRRVIGG+GCSPDWRVQFYVSPYARTRSTLREVGRCFSKKR+IGVREESRIREQDFGNFQVEERM  +KE RERFGRFFYRFPEGESAADVFDR+SSFFESLWRDI+MNRLRHDPSNDLNF+IVSHGLTSRIFLMKWFKWTV+QFE LNNFGNCEFR+M+LG+GGEYSLAVHHTE+EMLEWGLSPEMIADQKWRATACRGDWND+CPWYL  FFDHL DS  DDD VENEG  N +S
Sbjct:   10 MVATLPKRIILMRHGESQGNLDTAAYTTTPDHSIQLTAQGIAQARHAGEELRRVIGGEGCSPDWRVQFYVSPYARTRSTLREVGRCFSKKRLIGVREESRIREQDFGNFQVEERMKAVKETRERFGRFFYRFPEGESAADVFDRISSFFESLWRDIEMNRLRHDPSNDLNFIIVSHGLTSRIFLMKWFKWTVDQFEPLNNFGNCEFRIMQLGTGGEYSLAVHHTEQEMLEWGLSPEMIADQKWRATACRGDWNDKCPWYLDAFFDHLPDS--DDDAVENEGETNSLS 294

[Close]

BLAST of rna-XM_022785201.1 vs. UniProtKB/TrEMBL
Match: tr|K7N571|K7N571_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100777603 PE=4 SV=1)

HSP 1 Score: 520.39 bits (1339), Expect = 0.000e+0
Identity = 252/287 (87.80%), Postives = 261/287 (90.94%), Query Frame = 0

Query:    1 MKGVLPKRIILMRHGESHGNRDTAAYTTTPDHSIHLTAQGVAQARQAGVRLRRVIGGDGCSPDWRVQFYVSPYARTRSTLREVGRCFSKKRIIGVREESRIREQDFGNFQVEERMTVIKEARERFGRFFYRFPEGESAADVFDRVSSFFESLWRDIDMNRLRHDPSNDLNFVIVSHGLTSRIFLMKWFKWTVEQFEVLNNFGNCEFRVMELGSGGEYSLAVHHTEEEMLEWGLSPEMIADQKWRATACRGDWNDQCPWYLGEFFDHLTDSDDDDDPVENEGLENRIS 287
            M  VLPKRIILMRHGES GN +TAAYTTTPDHSI LTAQG+ QAR AG +LRRV+GGDGCSPDWRVQFYVSPY RTRSTLRE+GR FS+KRIIGVREESR+REQDFGNFQVEERM VIKE RERFGRFFYRFPEGESAADVFDRVSSFFESLWRDIDMNRLRHDPSNDLNFVIVSHGLTSRIFLMKWFKWTVEQFE LNNFGNCEFRVM+LGSGGEYSLAVHHTEEEMLEWGLSPEMIADQKWRATA RGDWNDQCPWYL  FFDHL     DDD VENE   N +S
Sbjct:    1 MVSVLPKRIILMRHGESQGNLNTAAYTTTPDHSIQLTAQGMTQARHAGEQLRRVMGGDGCSPDWRVQFYVSPYGRTRSTLRELGRHFSRKRIIGVREESRVREQDFGNFQVEERMKVIKETRERFGRFFYRFPEGESAADVFDRVSSFFESLWRDIDMNRLRHDPSNDLNFVIVSHGLTSRIFLMKWFKWTVEQFEHLNNFGNCEFRVMQLGSGGEYSLAVHHTEEEMLEWGLSPEMIADQKWRATAIRGDWNDQCPWYLDAFFDHLP----DDDAVENEAETNSLS 283

[Close]

BLAST of rna-XM_022785201.1 vs. UniProtKB/TrEMBL
Match: tr|V7BFV5|V7BFV5_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_007G182800g PE=4 SV=1)

HSP 1 Score: 520.005 bits (1338), Expect = 0.000e+0
Identity = 256/279 (91.76%), Postives = 263/279 (94.27%), Query Frame = 0

Query:    3 GVLPKRIILMRHGESHGNRDTAAYTTTPDHSIHLTAQGVAQARQAGVRLRRVIGGDGCSPDWRVQFYVSPYARTRSTLREVGRCFSKKRIIGVREESRIREQDFGNFQVEERMTVIKEARERFGRFFYRFPEGESAADVFDRVSSFFESLWRDIDMNRLRHDPSNDLNFVIVSHGLTSRIFLMKWFKWTVEQFEVLNNFGNCEFRVMELGSGGEYSLAVHHTEEEMLEWGLSPEMIADQKWRATACRGDWNDQCPWYLGEFFDHLTDSDDDDDPVENEG 281
            GVLP+RIILMRHGES GN DTAAYTTTPDH IHLT QG+ QAR AGVRLRR IG  GCSPDWRVQFYVSPY RTRSTLREVGRCFSKKRIIGVREESRIREQDFGNFQVEERM VIKE RERFGRFFYRFPEGESAADVFDRVSSFFESLWRDIDMNRLRHDPSNDLNFVIVSHGLTSRIFLMKWFKWTV+QFE LNNFGNCEFRVM+LGSGGEYSLAVHHTEEEMLEWGLSP+MIADQKWRATA RG+WNDQCPWYLG+FFDHL DSDDDDD VENEG
Sbjct:   12 GVLPRRIILMRHGESQGNLDTAAYTTTPDHGIHLTEQGLEQARDAGVRLRRAIGASGCSPDWRVQFYVSPYDRTRSTLREVGRCFSKKRIIGVREESRIREQDFGNFQVEERMKVIKETRERFGRFFYRFPEGESAADVFDRVSSFFESLWRDIDMNRLRHDPSNDLNFVIVSHGLTSRIFLMKWFKWTVDQFEHLNNFGNCEFRVMQLGSGGEYSLAVHHTEEEMLEWGLSPDMIADQKWRATASRGEWNDQCPWYLGDFFDHLPDSDDDDDAVENEG 290

[Close]

BLAST of rna-XM_022785201.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445F9B9|A0A445F9B9_GLYSO (Phosphoglycerate mutase-like protein AT74 OS=Glycine soja OX=3848 GN=D0Y65_054951 PE=4 SV=1)

HSP 1 Score: 519.62 bits (1337), Expect = 0.000e+0
Identity = 251/287 (87.46%), Postives = 261/287 (90.94%), Query Frame = 0

Query:    1 MKGVLPKRIILMRHGESHGNRDTAAYTTTPDHSIHLTAQGVAQARQAGVRLRRVIGGDGCSPDWRVQFYVSPYARTRSTLREVGRCFSKKRIIGVREESRIREQDFGNFQVEERMTVIKEARERFGRFFYRFPEGESAADVFDRVSSFFESLWRDIDMNRLRHDPSNDLNFVIVSHGLTSRIFLMKWFKWTVEQFEVLNNFGNCEFRVMELGSGGEYSLAVHHTEEEMLEWGLSPEMIADQKWRATACRGDWNDQCPWYLGEFFDHLTDSDDDDDPVENEGLENRIS 287
            M  VLPKRII+MRHGES GN +TAAYTTTPDHSI LTAQG+ QAR AG +LRRV+GGDGCSPDWRVQFYVSPY RTRSTLRE+GR FS+KRIIGVREESR+REQDFGNFQVEERM VIKE RERFGRFFYRFPEGESAADVFDRVSSFFESLWRDIDMNRLRHDPSNDLNFVIVSHGLTSRIFLMKWFKWTVEQFE LNNFGNCEFRVM+LGSGGEYSLAVHHTEEEMLEWGLSPEMIADQKWRATA RGDWNDQCPWYL  FFDHL     DDD VENE   N +S
Sbjct:    1 MVSVLPKRIIVMRHGESQGNLNTAAYTTTPDHSIQLTAQGMTQARHAGEQLRRVMGGDGCSPDWRVQFYVSPYGRTRSTLRELGRHFSRKRIIGVREESRVREQDFGNFQVEERMKVIKETRERFGRFFYRFPEGESAADVFDRVSSFFESLWRDIDMNRLRHDPSNDLNFVIVSHGLTSRIFLMKWFKWTVEQFEHLNNFGNCEFRVMQLGSGGEYSLAVHHTEEEMLEWGLSPEMIADQKWRATAIRGDWNDQCPWYLDAFFDHLP----DDDAVENEAETNSLS 283

The following BLAST results are available for this feature:

BLAST of rna-XM_022785201.1 vs. UniProtKB/Swiss-Prot
BLAST of rna-XM_022785201.1 vs. Araport11
BLAST of rna-XM_022785201.1 vs. UniProtKB/TrEMBL

BLAST of rna-XM_022785201.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot)
Total hits: 3

Position :

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Match Name	E-value	Identity	Description
sp\|Q9MAA2\|AT74_ARATH	1.670e-152	74.81	Phosphoglycerate mutase-like protein AT74 OS=Arabi...	[more]
sp\|O04035\|AT74H_ARATH	3.454e-141	69.68	Phosphoglycerate mutase-like protein AT74H OS=Arab...	[more]
sp\|Q99288\|DET1_YEAST	2.757e-31	50.00	Broad-range acid phosphatase DET1 OS=Saccharomyces...	[more]

BLAST of rna-XM_022785201.1 vs. Araport11
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11)
Total hits: 2

Position :

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Match Name	E-value	Identity	Description
AT3G05170.1	1.708e-153	74.81	\| Phosphoglycerate mutase family protein \| Chr3:14...	[more]
AT1G08940.1	3.533e-142	69.68	\| Phosphoglycerate mutase family protein \| Chr1:28...	[more]

BLAST of rna-XM_022785201.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL)
Total hits: 10

Position :

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Match Name	E-value	Identity	Description
tr\|A0A3Q0FEY8\|A0A3Q0FEY8_VIGRR	0.000e+0	100.00	phosphoglycerate mutase-like protein AT74H isoform...	[more]
tr\|A0A1S3V5R6\|A0A1S3V5R6_VIGRR	0.000e+0	100.00	GDSL esterase/lipase At1g54790 isoform X1 OS=Vigna...	[more]
tr\|A0A1S3V8V0\|A0A1S3V8V0_VIGRR	0.000e+0	100.00	phosphoglycerate mutase-like protein AT74 isoform ...	[more]
tr\|A0A4D6N0V1\|A0A4D6N0V1_VIGUN	0.000e+0	93.86	Phosphoglycerate mutase OS=Vigna unguiculata OX=39...	[more]
tr\|A0A0S3SQ98\|A0A0S3SQ98_PHAAN	0.000e+0	95.49	Uncharacterized protein OS=Vigna angularis var. an...	[more]
tr\|A0A0L9VJG0\|A0A0L9VJG0_PHAAN	0.000e+0	95.49	Uncharacterized protein OS=Phaseolus angularis OX=...	[more]
tr\|A0A371HUY1\|A0A371HUY1_MUCPR	0.000e+0	87.46	Phosphoglycerate mutase-like protein AT74 (Fragmen...	[more]
tr\|K7N571\|K7N571_SOYBN	0.000e+0	87.80	Uncharacterized protein OS=Glycine max OX=3847 GN=...	[more]
tr\|V7BFV5\|V7BFV5_PHAVU	0.000e+0	91.76	Uncharacterized protein OS=Phaseolus vulgaris OX=3...	[more]
tr\|A0A445F9B9\|A0A445F9B9_GLYSO	0.000e+0	87.46	Phosphoglycerate mutase-like protein AT74 OS=Glyci...	[more]

InterPro

Analysis Name: InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0
Date Performed: 2023-06-20

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013078	Histidine phosphatase superfamily, clade-1	PFAM	PF00300	His_Phos_1	coord: 9..216 e-value: 8.0E-28 score: 97.4
IPR013078	Histidine phosphatase superfamily, clade-1	CDD	cd07067	HP_PGM_like	coord: 8..219 e-value: 1.93888E-20 score: 84.296
IPR029033	Histidine phosphatase superfamily	GENE3D	3.40.50.1240		coord: 4..242 e-value: 2.4E-36 score: 127.2
IPR029033	Histidine phosphatase superfamily	SUPERFAMILY	53254	Phosphoglycerate mutase-like	coord: 6..215
None	No IPR available	PANTHER	PTHR46192	BROAD-RANGE ACID PHOSPHATASE DET1	coord: 4..271

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr08:32318073..32322290-
coding sequence from alignment at chr08:32318073..32322290-

mRNA sequence

>rna-XM_022785201.1_VrVC1973A-SNU_v1 ID=rna-XM_022785201.1_VrVC1973A-SNU_v1; Name=rna-XM_022785201.1; organism=Vigna radiata; type=mRNA; length=939bp
ATGAAGGGAGTGCTGCCGAAGAGAATAATTCTGATGAGGCATGGGGAGTC
GCATGGGAACCGAGACACGGCGGCGTACACCACAACTCCCGACCACAGCA
TTCACTTAACCGCGCAGGGCGTGGCACAGGCGCGTCAAGCTGGCGTCCGC
CTCCGCCGCGTGATTGGCGGGGACGGCTGCTCACCGGACTGGCGAGTGCA
GTTCTACGTGTCACCGTACGCACGCACGCGATCCACGCTGCGCGAGGTAG
GTCGGTGTTTCTCGAAGAAGAGGATAATTGGCGTGAGGGAAGAGTCGCGG
ATTCGGGAGCAGGACTTCGGGAACTTTCAGGTGGAAGAGAGGATGACGGT
GATAAAAGAAGCACGAGAACGGTTCGGGAGGTTCTTCTATCGCTTCCCCG
AGGGAGAGTCCGCCGCCGACGTTTTCGATCGCGTTTCAAGTTTCTTTGAA
TCTCTGTGGAGGGACATAGACATGAACAGGCTTCGTCACGATCCTTCCAA
TGATTTGAACTTCGTAATTGTTTCTCACGGGCTGACATCGCGTATTTTCC
TTATGAAGTGGTTCAAGTGGACGGTTGAGCAGTTTGAGGTCCTAAACAAT
TTTGGGAACTGCGAGTTCCGTGTTATGGAGCTAGGAAGTGGTGGTGAATA
CAGCTTAGCTGTTCATCATACAGAAGAAGAAATGCTGGAATGGGGACTCT
CTCCTGAGATGATAGCTGACCAAAAATGGCGCGCCACGGCGTGCAGGGGT
GACTGGAATGATCAGTGTCCCTGGTACCTTGGGGAGTTTTTTGATCATCT
TACTGACTCTGATGATGATGATGATCCTGTGGAAAATGAAGGGTTGGAGA
ATAGAATCTCTTTTGCCCATTCTTCCACGTTTACTATTTCATTAATGTTT
TACGTTGGCGGATTCCATTCCCACAAGGAAAGAAACTGA

protein sequence of rna-XM_022785201.1_VrVC1973A-SNU_v1

>rna-XM_022785201.1_VrVC1973A-SNU_v1 ID=rna-XM_022785201.1_VrVC1973A-SNU_v1; Name=rna-XM_022785201.1_VrVC1973A-SNU_v1; organism=Vigna radiata; type=polypeptide; length=312bp
MKGVLPKRIILMRHGESHGNRDTAAYTTTPDHSIHLTAQGVAQARQAGVR
LRRVIGGDGCSPDWRVQFYVSPYARTRSTLREVGRCFSKKRIIGVREESR
IREQDFGNFQVEERMTVIKEARERFGRFFYRFPEGESAADVFDRVSSFFE
SLWRDIDMNRLRHDPSNDLNFVIVSHGLTSRIFLMKWFKWTVEQFEVLNN
FGNCEFRVMELGSGGEYSLAVHHTEEEMLEWGLSPEMIADQKWRATACRG
DWNDQCPWYLGEFFDHLTDSDDDDDPVENEGLENRISFAHSSTFTISLMF
YVGGFHSHKERN

mRNA from alignment at chr08:32318073..32322290-

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>rna-XM_022785201.1_VrVC1973A-SNU_v1 ID=rna-XM_022785201.1_VrVC1973A-SNU_v1; Name=rna-XM_022785201.1; organism=Vigna radiata; type=mRNA; length=4218bp; location=Sequence derived from: chr08:32318073..32322290- (Vigna radiata
TGATTTTCAAAATTCGTTGCAGAAAGAAAGGGCGTGTCTGTCAAATTGTG
AAGTATTTAGAACATTGTAAATTTGAAATTGAGGGAGAGAAGAAAAATAT
GAAGGGAGTGCTGCCGAAGAGAATAATTCTGATGAGGCATGGGGAGTCGC
ATGGGAACCGAGACACGGCGGCGTACACCACAACTCCCGACCACAGCATT
CACTTAACCGCGCAGGGCGTGGCACAGGCGCGTCAAGCTGGCGTCCGCCT
CCGCCGCGTGATTGGCGGGGACGGCTGCTCACCGGACTGGCGAGTGCAGT
TCTACGTGTCACCGTACGCACGCACGCGATCCACGCTGCGCGAGGTAGGT
CGGTGTTTCTCGAAGAAGAGGATAATTGGCGTGAGGGAAGAGTCGCGGAT
TCGGGAGCAGGACTTCGGGAACTTTCAGGTGGAAGAGAGGATGACGGTGA
TAAAAGAAGCACGAGAACGGTTCGGGAGGTTCTTCTATCGCTTCCCCGAG
GGAGAGTCCGCCGCCGACGTTTTCGATCGCGTTTCAAGTAACCTAACTCT
CTCTTCTTTACCATTGGTCTACAAAATGAACTTCTCATTATCCTTCATTT
TTTATTTAATTTTATCGATAAATACTTTAGCAGTTGAAATTATCACAATT
TTAACGAACTTTCACATCATAAAGAGAACTAATAATTCATAAGAGAAGAG
CGATAATTAGACTCGTTTTACTTACTAATTGAGTTTTCATAATTTTCAAT
CCATGAAGATGCGTTTTAAAAAAATGCTTCTCTGACATATTTAACTAAAA
AAAACACTCATCTATGTTAAAAATCTTAGTGAAAACTTTTGTTGAGAACT
TCTGTTCTAAAATCTATATTTTCTTTATCCACCTTTGGAAGAAAGATCTT
GCTTAAAAGACGCAGACTTAATTTAAGTATGATGAAATGAAACTAATACA
TGTCCTTCCAACATAAAGGTTTTTTAAAGATCGTTCATTAATTACTATTA
TAAGCAGTAATACCAATAATATTTTTTCTTGGATATCAAACTTTTACATG
AGTAATATTTTTTCTCTATGAATTTGGATAATGAAATGGAATCAAATCGG
TTCTCAAGCCACAAATGTTACCAGCTAGTTTGATTATTATATTGAGGTAT
CAAATGGTAAGGGGAATAAAGTGAAATGGATATAGGAGACGACGGTAAGG
ATCAGACAACAGAATAAATTTATATCTTTGCATATTTTGAAAATGATAAA
TATATTTTTAATAGTTGAAATTTAAAGTAAAATTGGAATTCCTCTTTTTG
AAACTTTTGATATCTATTGTTCCAAACTTTAATAATAGACGAATATAATA
ATTTTAATACAAAAAAATATTAATAAAGTTAAACTGATTAAAAAAACTAT
ATTTAAAAGACAAAATAAAATATATCAATGTTTCATATAAAAAAGAATTT
CAATTTTATATTAAATGTTCATTTACTAAAAATATATTTAATCTTATTTT
AATTTGACAAATGTGACCAATAATGTTTTAAAATTTAGCATATTTTATGA
CGTGAGATGTCGAAATTAAACAAAATTTTAAAAATAAGCTTCTGTTTTTT
CTTTTTTTTTTCTTTTTTCTTTTAACTTAATTGCACATATCATTATCAAA
GTTTAACGCTTTTCCATATTTTAATTTCTGAGTGTCAACTAGGCAAATTA
TATTACTAATTTTTTAAAATTAAGTATATTTTACTTCTTTTTGTCTGAGT
TTTGTCGGTCATTATGACATTAAAATTTATCAGACATAAACTAAGAAGTC
AAATGTCTTTAATTTTAAAATATTAGTGATAAAATTTATTAAATTGAAAC
TTGTATAAAAAAAAATTGAATGGTAAGATGTGCAATTAGAGTCAAACTAA
AACAAATTTCGTTTTTGAATTTTTTGTTGTCTAGTATGAACTATTAGATA
GTTCATGACTGTGTCAAGTAATCACTATGTTAAATATTTGTCAGAGTTCA
TAGGAAAGTAATTTTTTTTTTCTTTAATATTAAAACATAATGGTAAACGT
GTCTGGATAACATTATTCCGTCTTGATTGTTTTACAGGTTTCTTTGAATC
TCTGTGGAGGGACATAGACATGAACAGGCTTCGTCACGATCCTTCCAATG
ATTTGAACTTCGTAATTGTTTCTCACGGGCTGACATCGCGTATTTTCCTT
ATGAAGTGGTTCAAGTGGACGGTTGAGCAGTTTGAGGTCCTAAACAATTT
TGGGAACTGCGAGTTCCGTGTTATGGAGCTAGGAAGTGGTGGTGAATACA
GCTTAGCTGTTCATCATACAGAAGAAGAAATGCTGGAATGGGGACTCTCT
CCTGAGATGATAGCTGACCAAAAATGGCGCGCCACGGCGTGCAGGGGTGA
CTGGAATGATCAGTGTCCCTGGTACCTTGGGGAGTTTTTTGATCATCTTA
CTGACTCTGATGATGATGATGATCCTGTGGAAAATGAAGGTGATCCTAAT
TCTTTAAGTGTGTGTACATAGTGTGCTTCCCATATTGGTTTATAGATTGA
TTTTTAGTTTTAAATTACATGAAAAGGGGTTCGATAGGATGAAAGGAAAC
TAGGAAAGTGATAGTTGACACTCATAGGTAGTCTTTTGATTGTAGCTCGA
CTACGCAACTTTATTCTGTTTGTAGGGCTTTGTATAATTGTATTAAAGCT
TCTTTTGCTTCTTGTGGATTATTTGTCATGATGGCAAAGCCTGCGTTATC
ATTGTTTAGAAAACATTGCAATGTTTTAATCTGAGTTCAGTATGGTTTCT
ATGATGGATATGATGAACCTAGGCACGATAATTTTGTTCAGTATTGTTTA
TTAAATTTCTCTGATTCATTTTCAAAGGTGGTCTAGTATAGAACAAACAG
ATATTGCACATGACAAAGTTGGAGTATTTGCAAATATTATTGGTATCACA
GTCTTGTGAGAAACTCAGATGAGAGGACAAGTGCATTTAATAAGATGAAT
AGTGGATTTCTTTCGAATTTAAGAAGCAGAAGAGGACTTAGAAATACTAA
TGTAAAGAATAAAAGAGAGCAAATCGTAGAATCATTATGGCCACCCATGG
CATTCTAAACCACTAACATATTACACCCGAAACGTGAAATTAAGAACCGG
AATATGATTTGTCAGTGAGATCAGAAGCCAATTTCAGAATAGGTCGCGGA
GGAGGCATTGGTTCTTCTTCCTCATCCCGAGAACCTATTTTTTGGAAGGA
CTTACTCCAGATACTCTTAAACTTCTTAGGTGGCGGAATCTCTTCCACGT
TCTCATTTATGCTTACGGTTTTCTTTATAGATCGCGTTGCTGCTAAAGTT
GGCGTTGGCGATGTTAGTATCTCATTTTTTGCTTCCATCTTATTATCATC
GTTCATGTATGAGTTATTCTTCTCTTCAGCTAGCTGTACATGAGAAGAAA
TAGAGTCACCTGCAAGACCTTCAGTTGGTGGAAGCTTCTTGCCATCATCA
ACTTCGGTTGGTGTCTCTGACTGAACCTCTTCTTTTGCTTTAGAATCAGA
ACCTCTTAGCGCAGTCGACCTTGAACTGTCACGTCTAGAACGCCCTAAAG
TCACCTTCTTTGACGCTTGCCAAGTCAGAGCTTTTTTTAGGAAATGGTAG
AGCCTGCAACAAATGCCCATAGGTTGAAATTGGAATTCTCTTTCGTCCAT
CTGCTAAAACTTACCAAGAGAAAAAAAAAAGTTATGAACAGGGTGGAAGA
AGAGATTGAGTAAACCCACCGTCAACTAACAATATAAAAGTTTATATCAG
GAAGTAGATATTGAAATATTATGAAGATATTCTTTGCTTTTCTTAGAAAG
TTGCCATTGAATCTGAAAGTAGAAAGCAAGAATATAGGAAGGCATTGCTT
GATACTGCATCTCGAAGGCATTGCTTGATACTGCATCTCCCCTGCTCTGA
TTATGTTTACTGCGATACGACCACACTTGAGCCATGTAATTGATTATTAA
TTATTATGCTTTAGTTACTCTTTCCAAATTATTAGCAGGGTTGTCGAATT
AATACGGAGTTGACAATGTATTTGTCGTGATGAAATGTACAGGGTTGGAG
AATAGAATCTCTTTTGCCCATTCTTCCACGTTTACTATTTCATTAATGTT
TTACGTTGGCGGATTCCATTCCCACAAGGAAAGAAACTGATAAGGAGACA
CGAAGAAATAAAACATTT

Coding sequence (CDS) from alignment at chr08:32318073..32322290-

>rna-XM_022785201.1_VrVC1973A-SNU_v1 ID=rna-XM_022785201.1_VrVC1973A-SNU_v1; Name=rna-XM_022785201.1; organism=Vigna radiata; type=CDS; length=939bp; location=Sequence derived from: chr08:32318073..32322290- (Vigna radiata
ATGAAGGGAGTGCTGCCGAAGAGAATAATTCTGATGAGGCATGGGGAGTC
GCATGGGAACCGAGACACGGCGGCGTACACCACAACTCCCGACCACAGCA
TTCACTTAACCGCGCAGGGCGTGGCACAGGCGCGTCAAGCTGGCGTCCGC
CTCCGCCGCGTGATTGGCGGGGACGGCTGCTCACCGGACTGGCGAGTGCA
GTTCTACGTGTCACCGTACGCACGCACGCGATCCACGCTGCGCGAGGTAG
GTCGGTGTTTCTCGAAGAAGAGGATAATTGGCGTGAGGGAAGAGTCGCGG
ATTCGGGAGCAGGACTTCGGGAACTTTCAGGTGGAAGAGAGGATGACGGT
GATAAAAGAAGCACGAGAACGGTTCGGGAGGTTCTTCTATCGCTTCCCCG
AGGGAGAGTCCGCCGCCGACGTTTTCGATCGCGTTTCAAGTTTCTTTGAA
TCTCTGTGGAGGGACATAGACATGAACAGGCTTCGTCACGATCCTTCCAA
TGATTTGAACTTCGTAATTGTTTCTCACGGGCTGACATCGCGTATTTTCC
TTATGAAGTGGTTCAAGTGGACGGTTGAGCAGTTTGAGGTCCTAAACAAT
TTTGGGAACTGCGAGTTCCGTGTTATGGAGCTAGGAAGTGGTGGTGAATA
CAGCTTAGCTGTTCATCATACAGAAGAAGAAATGCTGGAATGGGGACTCT
CTCCTGAGATGATAGCTGACCAAAAATGGCGCGCCACGGCGTGCAGGGGT
GACTGGAATGATCAGTGTCCCTGGTACCTTGGGGAGTTTTTTGATCATCT
TACTGACTCTGATGATGATGATGATCCTGTGGAAAATGAAGGGTTGGAGA
ATAGAATCTCTTTTGCCCATTCTTCCACGTTTACTATTTCATTAATGTTT
TACGTTGGCGGATTCCATTCCCACAAGGAAAGAAACTGA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR013078	His_Pase_superF_clade-1
IPR029033	His_PPase_superfam

Search form

rna-XM_022785201.1