rna-XM_022785313.1

Transcript Overview
Namerna-XM_022785313.1
Unique Namerna-XM_022785313.1_VrVC1973A-SNU_v1
TypemRNA
OrganismVigna radiata (Mung bean, green gram)
Sequence length348
Producttrigger factor-like protein TIG, Chloroplastic, transcript variant X5
References
External references for this mRNA
DatabaseAccession
GeneID106771415
GenbankXM_022785313.1
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr08chromosomechr08:25212737..25214501 +Vigna radiata cv. VC1973A genome v6.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
asvrvL369Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anvrvL0657Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL1114Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvrvL1173Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
caivrvL390Cicer arietinum ICC 4958 genome v2Cicer arietinum
caivrvL445Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavrvL237Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavrvL339Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavrvL372Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvrvL0515Cajanus cajan Asha genome v1.0Cajanus cajan
ccvrvL0700Cajanus cajan Asha genome v1.0Cajanus cajan
ccvrvL0724Cajanus cajan Asha genome v1.0Cajanus cajan
crvrvL278Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crvrvL376Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crvrvL419Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
psvrvL225Pisum sativum Cameor genome v1aPisum sativum
psvrvL239Pisum sativum Cameor genome v1aPisum sativum
pvvrvL061Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
psvrvL538Pisum sativum Cameor genome v1aPisum sativum
pvvrvL576Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvrvL591Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
vrvvrvL137Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvvrvL142Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvvssR772Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvssR800Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvssR811Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvssR842Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvzwsR625Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvzwsR654Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvvuaR538Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvzwsR690Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vrvvuR579Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vrvvuaR575Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vrvvuR624Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canvrvL217Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvrvL313Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvrvL348Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvrvL316Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvrvL388Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvrvL221Cicer arietinum
carvrvL311Cicer arietinum
carvrvL343Cicer arietinum
ccavrvL238Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavrvL267Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavrvL367Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vrvvumR620Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvumR667Vigna umbellata FF25 genome v1.0Vigna umbellata
vrvvvaR742Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvvaR792Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvvaR805Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vrvvstR643Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vrvvstR673Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvrvL398Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvrvL583Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvrvL055Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvrvL540Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvrvL551Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vrvvunR544Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vrvvunR546Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vrvvunR584Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LOC106771415gene-LOC106771415_VrVC1973A-SNU_v1Vigna radiatagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_022785313.1-1exon-XM_022785313.1-1_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_022785313.1-2exon-XM_022785313.1-2_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_022785313.1-3exon-XM_022785313.1-3_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_022785313.1-4exon-XM_022785313.1-4_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_022785313.1-5exon-XM_022785313.1-5_VrVC1973A-SNU_v1Vigna radiataexon
exon-XM_022785313.1-6exon-XM_022785313.1-6_VrVC1973A-SNU_v1Vigna radiataexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-XP_022641034.1cds-XP_022641034.1_VrVC1973A-SNU_v1Vigna radiataCDS
cds-XP_022641034.1cds-XP_022641034.1_VrVC1973A-SNU_v1_2Vigna radiataCDS
cds-XP_022641034.1cds-XP_022641034.1_VrVC1973A-SNU_v1_3Vigna radiataCDS
cds-XP_022641034.1cds-XP_022641034.1_VrVC1973A-SNU_v1_4Vigna radiataCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-XM_022785313.1_VrVC1973A-SNU_v1rna-XM_022785313.1_VrVC1973A-SNU_v1Vigna radiatapolypeptide
rna-XM_022785313.1_VrVC1973A-SNU_v1rna-XM_022785313.1_VrVC1973A-SNU_v1-proteinVigna radiatapolypeptide


Homology
[Close]
BLAST of rna-XM_022785313.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q8S9L5|TIG_ARATH (Trigger factor-like protein TIG, Chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIG PE=1 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 1.026e-44
Identity = 74/106 (69.81%), Postives = 90/106 (84.91%), Query Frame = 0 
Query:   10 EVCDIAVLDISATTIDQDESNVKNIP--SSKGFNFDIEDGDKVLPGFLDSIIGIHRGESKSFPLVFPETWKQENLRGVHAQFNVECEELFYRDLPELDDSIADKLL 113
            +V D+AV+DISATTID+D S  + IP   SKGF+FD E+G+++LPGFLD+IIGI  GESKSF LVFPE+WKQE+LRG  AQF V+C+ELFYRDLP LDDS+ADKLL
Sbjct:  269 QVGDLAVVDISATTIDEDGSTGQAIPDAESKGFHFDTEEGNRLLPGFLDAIIGIRAGESKSFTLVFPESWKQESLRGQRAQFTVDCKELFYRDLPTLDDSLADKLL 374
[Close]
BLAST of rna-XM_022785313.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q5N1P5|TIG_SYNP6 (Trigger factor OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=tig PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.676e-16
Identity = 39/102 (38.24%), Postives = 60/102 (58.82%), Query Frame = 0 
Query:   11 VCDIAVLDISATTIDQDESNVKNIPSSKGFNFDIE-DGDKVLPGFLDSIIGIHRGESKSFPLVFPETWKQENLRGVHAQFNVECEELFYRDLPELDDSIADK 111
            + D+AV+D     ++  E     IP   G +F IE + D+ +PGF+  I+G+   E+++    FPET+ QE + G  AQF +  +EL  RDLPELDD+ A +
Sbjct:  170 IGDVAVIDFQGILVESGEE----IPGGSGTDFQIEVEEDRFIPGFISGIVGMAIEETRTVDATFPETYAQEEVAGKAAQFTITLKELKTRDLPELDDAFAQE 267
[Close]
BLAST of rna-XM_022785313.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q935Z3|TIG_SYNE7 (Trigger factor OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=tig PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.732e-16
Identity = 39/102 (38.24%), Postives = 60/102 (58.82%), Query Frame = 0 
Query:   11 VCDIAVLDISATTIDQDESNVKNIPSSKGFNFDIE-DGDKVLPGFLDSIIGIHRGESKSFPLVFPETWKQENLRGVHAQFNVECEELFYRDLPELDDSIADK 111
            + D+AV+D     ++  E     IP   G +F IE + D+ +PGF+  I+G+   E+++    FPET+ QE + G  AQF +  +EL  RDLPELDD+ A +
Sbjct:  170 IGDVAVIDFQGILVESGEE----IPGGSGTDFQIEVEEDRFIPGFISGIVGMAIEETRTVDATFPETYAQEEVAGKAAQFTITLKELKTRDLPELDDAFAQE 267
[Close]
BLAST of rna-XM_022785313.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q3B0U0|TIG_SYNS9 (Trigger factor OS=Synechococcus sp. (strain CC9902) OX=316279 GN=tig PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.538e-14
Identity = 40/100 (40.00%), Postives = 63/100 (63.00%), Query Frame = 0 
Query:   10 EVCDIAVLDISATTIDQDESNVKNIPSSKGFNFDIEDGDKVLPGFLDSIIGIHRGESKSFPLVFPETWKQENLRGVHAQFNVECEELFYRDLPELDDSIA 109
            E  DIAVL    T  D D S ++   S+   + D+++G +++PGF++ +IG+  GESKS    FP+ + +E+ RG  A F +E ++L  R+LPELDD+ A
Sbjct:  172 EKGDIAVLGFKGTYSD-DGSEIEG-GSADSMDVDLDNG-RMIPGFIEGVIGMKVGESKSVDCQFPDDYPKEDARGRKAAFAIELKDLKTRELPELDDAFA 268
[Close]
BLAST of rna-XM_022785313.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q3ANI7|TIG_SYNSC (Trigger factor OS=Synechococcus sp. (strain CC9605) OX=110662 GN=tig PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.997e-14
Identity = 38/97 (39.18%), Postives = 61/97 (62.89%), Query Frame = 0 
Query:   13 DIAVLDISATTIDQDESNVKNIPSSKGFNFDIEDGDKVLPGFLDSIIGIHRGESKSFPLVFPETWKQENLRGVHAQFNVECEELFYRDLPELDDSIA 109
            DIAVL    T  D D S ++   S+   + D+E+G +++PGF++ +IG+  GE+K+    FP+ + +E+ RG  A F +E ++L  R+LPELDD  A
Sbjct:  175 DIAVLGFKGTYTD-DGSEIEG-GSADSMDVDLENG-RMIPGFIEGVIGMKVGETKTVDCQFPDDYPKEDARGRKASFEIELKDLKTRELPELDDEFA 268
[Close]
BLAST of rna-XM_022785313.1 vs. UniProtKB/Swiss-Prot
Match: sp|B1XL18|TIG_SYNP2 (Trigger factor OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) OX=32049 GN=tig PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.641e-13
Identity = 37/103 (35.92%), Postives = 57/103 (55.34%), Query Frame = 0 
Query:   10 EVCDIAVLDISATTI-DQDESNVKNIPSSKG--FNFDIEDGDKVLPGFLDSIIGIHRGESKSFPLVFPETWKQENLRGVHAQFNVECEELFYRDLPELDDSIA 109
            ++ D+A+ D     + D  E     IP ++   F+ D+E+G K +PGF+D  +G+   E+K F + FPE +  E + G    F V  +EL  R+LPELDD  A
Sbjct:  167 QMGDVAIADYEGRYVNDAGEEEEDIIPGTQAEDFSLDLEEG-KFIPGFVDGFVGMKPEETKKFTVTFPEDYGNEEMAGKQVSFTVTLKELKSRELPELDDEFA 268
[Close]
BLAST of rna-XM_022785313.1 vs. UniProtKB/Swiss-Prot
Match: sp|A2C5R7|TIG_PROM3 (Trigger factor OS=Prochlorococcus marinus (strain MIT 9303) OX=59922 GN=tig PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.662e-13
Identity = 39/101 (38.61%), Postives = 63/101 (62.38%), Query Frame = 0 
Query:   11 VCDIAVLDISATTIDQDESNVKNIPSSKGFNFDIEDGDKVLPGFLDSIIGIHRGESKSFPLVFPETWKQENLRGVHAQFNVECEELFYRDLPELDDSIADK 111
            + DIAV+  S T  D D S ++   SS+  + D+EDG +++PGF++ IIG+  G  K+    FP+ + +E+ RG  A F +  +EL  R+LP+LDD+ A +
Sbjct:  173 IGDIAVVSFSGT-YDDDGSAIEG-GSSESMDVDLEDG-QMIPGFVEGIIGMSLGSEKTVDCHFPDDYSKEDARGRKASFVINLKELKTRELPDLDDAFAQQ 270
[Close]
BLAST of rna-XM_022785313.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q7V991|TIG_PROMM (Trigger factor OS=Prochlorococcus marinus (strain MIT 9313) OX=74547 GN=tig PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.999e-13
Identity = 39/101 (38.61%), Postives = 64/101 (63.37%), Query Frame = 0 
Query:   11 VCDIAVLDISATTIDQDESNVKNIPSSKGFNFDIEDGDKVLPGFLDSIIGIHRGESKSFPLVFPETWKQENLRGVHAQFNVECEELFYRDLPELDDSIADK 111
            + DIAV+  S T  D D S ++   SS   + D+EDG +++PGF++ IIG++ G+ K+    FP+ + +E+ RG  A F +  +EL  R+LP+LDD+ A +
Sbjct:  173 IGDIAVVSFSGT-YDDDGSAIEG-GSSDSMDVDLEDG-QMIPGFVEGIIGMNLGDEKTVDCHFPDDYSKEDARGRKASFVINLKELKTRELPDLDDAFAQQ 270
[Close]
BLAST of rna-XM_022785313.1 vs. UniProtKB/Swiss-Prot
Match: sp|A5GHT2|TIG_SYNPW (Trigger factor OS=Synechococcus sp. (strain WH7803) OX=32051 GN=tig PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.069e-13
Identity = 39/104 (37.50%), Postives = 64/104 (61.54%), Query Frame = 0 
Query:    8 KXEVCDIAVLDISATTIDQDESNVKNIPSSKGFNFDIEDGDKVLPGFLDSIIGIHRGESKSFPLVFPETWKQENLRGVHAQFNVECEELFYRDLPELDDSIADK 111
            K E  DIAV+    T  D D S ++   S+   + D+E G +++PGF++ ++G+  G+SK+    FPE + +E+ RG  A F +E ++L  R+LPELDD+ A +
Sbjct:  170 KAEQGDIAVVGFKGTYSD-DGSEIEG-GSADSMDVDLEHG-RMIPGFVEGVVGMAVGDSKTVDCTFPEDYPKEDARGRKASFAIELKDLKTRELPELDDAFAKQ 270
[Close]
BLAST of rna-XM_022785313.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q0IE18|TIG_SYNS3 (Trigger factor OS=Synechococcus sp. (strain CC9311) OX=64471 GN=tig PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 1.976e-12
Identity = 37/99 (37.37%), Postives = 62/99 (62.63%), Query Frame = 0 
Query:   13 DIAVLDISATTIDQDESNVKNIPSSKGFNFDIEDGDKVLPGFLDSIIGIHRGESKSFPLVFPETWKQENLRGVHAQFNVECEELFYRDLPELDDSIADK 111
            DIAV+    T  D D S ++   SS+  + D+E G +++PGF++ ++G+  G+SK+    FPE + +E+ RG  A F +E ++L  R+LP+LDD  A +
Sbjct:  175 DIAVVGFKGTYSD-DGSEIEG-GSSESMDVDLEHG-RMIPGFIEGVVGMTVGDSKTVACNFPEDYPKEDARGRKASFEIELKDLKTRELPDLDDDFAKQ 270
[Close]
BLAST of rna-XM_022785313.1 vs. Araport11
Match: AT5G55220.1 (| trigger factor type chaperone family protein | Chr5:22397677-22400678 FORWARD LENGTH=547 | 201606)

HSP 1 Score: 155.221 bits (391), Expect = 1.049e-45
Identity = 74/106 (69.81%), Postives = 90/106 (84.91%), Query Frame = 0 
Query:   10 EVCDIAVLDISATTIDQDESNVKNIP--SSKGFNFDIEDGDKVLPGFLDSIIGIHRGESKSFPLVFPETWKQENLRGVHAQFNVECEELFYRDLPELDDSIADKLL 113
            +V D+AV+DISATTID+D S  + IP   SKGF+FD E+G+++LPGFLD+IIGI  GESKSF LVFPE+WKQE+LRG  AQF V+C+ELFYRDLP LDDS+ADKLL
Sbjct:  269 QVGDLAVVDISATTIDEDGSTGQAIPDAESKGFHFDTEEGNRLLPGFLDAIIGIRAGESKSFTLVFPESWKQESLRGQRAQFTVDCKELFYRDLPTLDDSLADKLL 374
[Close]
BLAST of rna-XM_022785313.1 vs. UniProtKB/TrEMBL
Match: tr|A0A3Q0FEH5|A0A3Q0FEH5_VIGRR (trigger factor-like protein TIG, Chloroplastic isoform X3 OS=Vigna radiata var. radiata OX=3916 GN=LOC106771415 PE=4 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 5.863e-77
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0 
Query:    1 MTSLMLLKXEVCDIAVLDISATTIDQDESNVKNIPSSKGFNFDIEDGDKVLPGFLDSIIGIHRGESKSFPLVFPETWKQENLRGVHAQFNVECEELFYRDLPELDDSIADKLLLD 115
            MTSLMLLKXEVCDIAVLDISATTIDQDESNVKNIPSSKGFNFDIEDGDKVLPGFLDSIIGIHRGESKSFPLVFPETWKQENLRGVHAQFNVECEELFYRDLPELDDSIADKLLLD
Sbjct:    1 MTSLMLLKXEVCDIAVLDISATTIDQDESNVKNIPSSKGFNFDIEDGDKVLPGFLDSIIGIHRGESKSFPLVFPETWKQENLRGVHAQFNVECEELFYRDLPELDDSIADKLLLD 115
[Close]
BLAST of rna-XM_022785313.1 vs. UniProtKB/TrEMBL
Match: tr|A0A3Q0FBN3|A0A3Q0FBN3_VIGRR (trigger factor-like protein TIG, Chloroplastic isoform X1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106771415 PE=4 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 2.006e-70
Identity = 105/106 (99.06%), Postives = 106/106 (100.00%), Query Frame = 0 
Query:   10 EVCDIAVLDISATTIDQDESNVKNIPSSKGFNFDIEDGDKVLPGFLDSIIGIHRGESKSFPLVFPETWKQENLRGVHAQFNVECEELFYRDLPELDDSIADKLLLD 115
            +VCDIAVLDISATTIDQDESNVKNIPSSKGFNFDIEDGDKVLPGFLDSIIGIHRGESKSFPLVFPETWKQENLRGVHAQFNVECEELFYRDLPELDDSIADKLLLD
Sbjct:   31 QVCDIAVLDISATTIDQDESNVKNIPSSKGFNFDIEDGDKVLPGFLDSIIGIHRGESKSFPLVFPETWKQENLRGVHAQFNVECEELFYRDLPELDDSIADKLLLD 136
[Close]
BLAST of rna-XM_022785313.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3RJ72|A0A0S3RJ72_PHAAN (Peptidylprolyl isomerase OS=Vigna angularis var. angularis OX=157739 GN=Vigan.03G026000 PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.767e-59
Identity = 97/106 (91.51%), Postives = 99/106 (93.40%), Query Frame = 0 
Query:   10 EVCDIAVLDISATTIDQDESNVKNIPS--SKGFNFDIEDGDKVLPGFLDSIIGIHRGESKSFPLVFPETWKQENLRGVHAQFNVECEELFYRDLPELDDSIADKLL 113
            +V DIAVLDISATTIDQDESNVK IPS  SKGFNFD EDGDKVLPGFLDSIIGI RGESKSFPLVFPETW QENLRGVHAQFNVEC+ELFYRDLPELDDSIADKLL
Sbjct:  211 QVGDIAVLDISATTIDQDESNVKTIPSAESKGFNFDTEDGDKVLPGFLDSIIGIQRGESKSFPLVFPETWNQENLRGVHAQFNVECKELFYRDLPELDDSIADKLL 316
[Close]
BLAST of rna-XM_022785313.1 vs. UniProtKB/TrEMBL
Match: tr|V7BCY0|V7BCY0_PHAVU (Peptidylprolyl isomerase OS=Phaseolus vulgaris OX=3885 GN=PHAVU_008G272400g PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 4.962e-59
Identity = 96/106 (90.57%), Postives = 100/106 (94.34%), Query Frame = 0 
Query:   10 EVCDIAVLDISATTIDQDESNVKNIPS--SKGFNFDIEDGDKVLPGFLDSIIGIHRGESKSFPLVFPETWKQENLRGVHAQFNVECEELFYRDLPELDDSIADKLL 113
            +V D+A+LDISATTIDQDESNVKNIPS  SKGFNFD EDGDKVLPGFLDSIIGIHRGESKSFPLVFPETW QENLRGVHAQF VEC+ELFYRDLPELDDSIADKLL
Sbjct:  263 QVGDVALLDISATTIDQDESNVKNIPSAESKGFNFDTEDGDKVLPGFLDSIIGIHRGESKSFPLVFPETWTQENLRGVHAQFTVECKELFYRDLPELDDSIADKLL 368
[Close]
BLAST of rna-XM_022785313.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9UVG5|A0A0L9UVG5_PHAAN (Peptidylprolyl isomerase OS=Phaseolus angularis OX=3914 GN=LR48_Vigan07g026600 PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 5.029e-59
Identity = 97/106 (91.51%), Postives = 99/106 (93.40%), Query Frame = 0 
Query:   10 EVCDIAVLDISATTIDQDESNVKNIPS--SKGFNFDIEDGDKVLPGFLDSIIGIHRGESKSFPLVFPETWKQENLRGVHAQFNVECEELFYRDLPELDDSIADKLL 113
            +V DIAVLDISATTIDQDESNVK IPS  SKGFNFD EDGDKVLPGFLDSIIGI RGESKSFPLVFPETW QENLRGVHAQFNVEC+ELFYRDLPELDDSIADKLL
Sbjct:  261 QVGDIAVLDISATTIDQDESNVKTIPSAESKGFNFDTEDGDKVLPGFLDSIIGIQRGESKSFPLVFPETWNQENLRGVHAQFNVECKELFYRDLPELDDSIADKLL 366
[Close]
BLAST of rna-XM_022785313.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6MJU4|A0A4D6MJU4_VIGUN (Peptidylprolyl isomerase OS=Vigna unguiculata OX=3917 GN=DEO72_LG7g3066 PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 7.493e-59
Identity = 97/106 (91.51%), Postives = 100/106 (94.34%), Query Frame = 0 
Query:   10 EVCDIAVLDISATTIDQDESNVKNIPS--SKGFNFDIEDGDKVLPGFLDSIIGIHRGESKSFPLVFPETWKQENLRGVHAQFNVECEELFYRDLPELDDSIADKLL 113
            +V DIAVLDISATTIDQDESNVK+IPS  SKGFNFD E GDKVLPGFLDSIIGIHRGESKSFPLVFPETW QENLRGVHAQFNVEC+ELFYRDLPELDDSIADKLL
Sbjct:  264 QVGDIAVLDISATTIDQDESNVKSIPSAESKGFNFDTEYGDKVLPGFLDSIIGIHRGESKSFPLVFPETWNQENLRGVHAQFNVECKELFYRDLPELDDSIADKLL 369
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BLAST of rna-XM_022785313.1 vs. UniProtKB/TrEMBL
Match: tr|A0A151SXG8|A0A151SXG8_CAJCA (Peptidylprolyl isomerase OS=Cajanus cajan OX=3821 GN=KK1_014923 PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 6.338e-58
Identity = 95/106 (89.62%), Postives = 99/106 (93.40%), Query Frame = 0 
Query:   10 EVCDIAVLDISATTIDQDESNVKNIPS--SKGFNFDIEDGDKVLPGFLDSIIGIHRGESKSFPLVFPETWKQENLRGVHAQFNVECEELFYRDLPELDDSIADKLL 113
            +V D+AVLDISATTIDQDESNVKNIPS  SKGFNFD EDGDKVLPGFLDSIIGI RGESKSFPLVFPETW QENLRGVHAQF VEC+ELFYRDLPELDDS+ADKLL
Sbjct:  263 QVGDVAVLDISATTIDQDESNVKNIPSAESKGFNFDTEDGDKVLPGFLDSIIGILRGESKSFPLVFPETWNQENLRGVHAQFTVECKELFYRDLPELDDSVADKLL 368
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BLAST of rna-XM_022785313.1 vs. UniProtKB/TrEMBL
Match: tr|A0A5J5A7X6|A0A5J5A7X6_9ASTE (Peptidylprolyl isomerase OS=Nyssa sinensis OX=561372 GN=F0562_008758 PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 6.506e-56
Identity = 90/106 (84.91%), Postives = 99/106 (93.40%), Query Frame = 0 
Query:   10 EVCDIAVLDISATTIDQDESNVKNIPS--SKGFNFDIEDGDKVLPGFLDSIIGIHRGESKSFPLVFPETWKQENLRGVHAQFNVECEELFYRDLPELDDSIADKLL 113
            ++ D+A+LDISATTIDQDESNV+ IPS  SKGF+FD EDGDKVLPGFLDSIIGI RGE+KSFPLVFPE+WKQENLRGVHAQF VEC+ELFYRDLPELDDSIADKLL
Sbjct:  263 QIGDVAILDISATTIDQDESNVQKIPSAESKGFHFDTEDGDKVLPGFLDSIIGIQRGETKSFPLVFPESWKQENLRGVHAQFTVECKELFYRDLPELDDSIADKLL 368
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BLAST of rna-XM_022785313.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0R0LCV7|A0A0R0LCV7_SOYBN (Peptidylprolyl isomerase OS=Glycine max OX=3847 GN=100805543 PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 9.814e-56
Identity = 92/106 (86.79%), Postives = 98/106 (92.45%), Query Frame = 0 
Query:   10 EVCDIAVLDISATTIDQDESNVKNIPS--SKGFNFDIEDGDKVLPGFLDSIIGIHRGESKSFPLVFPETWKQENLRGVHAQFNVECEELFYRDLPELDDSIADKLL 113
            +V D+AVLDISATTIDQDESNVK+IPS  SKGFNFD E G++VLPGFLDSIIGI RGESKSFPLVFPETWKQENL GVHAQF VEC+ELFYRDLPELDDSIADKLL
Sbjct:  236 QVGDVAVLDISATTIDQDESNVKSIPSAESKGFNFDTEYGEQVLPGFLDSIIGIQRGESKSFPLVFPETWKQENLHGVHAQFTVECKELFYRDLPELDDSIADKLL 341
[Close]
BLAST of rna-XM_022785313.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6A4QND3|A0A6A4QND3_LUPAL (Peptidylprolyl isomerase OS=Lupinus albus OX=3870 GN=Lalb_Chr04g0248161 PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 1.301e-55
Identity = 90/106 (84.91%), Postives = 98/106 (92.45%), Query Frame = 0 
Query:   10 EVCDIAVLDISATTIDQDESNVKNIPS--SKGFNFDIEDGDKVLPGFLDSIIGIHRGESKSFPLVFPETWKQENLRGVHAQFNVECEELFYRDLPELDDSIADKLL 113
            ++ D+AV+DISATTIDQDESN+KNIPS  SKGFNFD EDGD VLPGFLDSIIGI RGE+KSFPLVFPE WKQENLRGVHAQF VEC+ELFYRDLPELDDSIADKL+
Sbjct:  272 QIGDVAVIDISATTIDQDESNIKNIPSAESKGFNFDTEDGDNVLPGFLDSIIGICRGETKSFPLVFPENWKQENLRGVHAQFTVECKELFYRDLPELDDSIADKLI 377
The following BLAST results are available for this feature:
BLAST of rna-XM_022785313.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
sp|Q8S9L5|TIG_ARATH1.026e-4469.81Trigger factor-like protein TIG, Chloroplastic OS=... [more]
sp|Q5N1P5|TIG_SYNP65.676e-1638.24Trigger factor OS=Synechococcus sp. (strain ATCC 2... [more]
sp|Q935Z3|TIG_SYNE75.732e-1638.24Trigger factor OS=Synechococcus elongatus (strain ... [more]
sp|Q3B0U0|TIG_SYNS92.538e-1440.00Trigger factor OS=Synechococcus sp. (strain CC9902... [more]
sp|Q3ANI7|TIG_SYNSC3.997e-1439.18Trigger factor OS=Synechococcus sp. (strain CC9605... [more]
sp|B1XL18|TIG_SYNP21.641e-1335.92Trigger factor OS=Synechococcus sp. (strain ATCC 2... [more]
sp|A2C5R7|TIG_PROM31.662e-1338.61Trigger factor OS=Prochlorococcus marinus (strain ... [more]
sp|Q7V991|TIG_PROMM1.999e-1338.61Trigger factor OS=Prochlorococcus marinus (strain ... [more]
sp|A5GHT2|TIG_SYNPW3.069e-1337.50Trigger factor OS=Synechococcus sp. (strain WH7803... [more]
sp|Q0IE18|TIG_SYNS31.976e-1237.37Trigger factor OS=Synechococcus sp. (strain CC9311... [more]
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BLAST of rna-XM_022785313.1 vs. Araport11
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs arabidopsis Araport11)
Total hits: 1
Match NameE-valueIdentityDescription
AT5G55220.11.049e-4569.81| trigger factor type chaperone family protein | C... [more]
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BLAST of rna-XM_022785313.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-20 (Blastp of Vigna radiata cv. VC1973A proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A3Q0FEH5|A0A3Q0FEH5_VIGRR5.863e-77100.00trigger factor-like protein TIG, Chloroplastic iso... [more]
tr|A0A3Q0FBN3|A0A3Q0FBN3_VIGRR2.006e-7099.06trigger factor-like protein TIG, Chloroplastic iso... [more]
tr|A0A0S3RJ72|A0A0S3RJ72_PHAAN1.767e-5991.51Peptidylprolyl isomerase OS=Vigna angularis var. a... [more]
tr|V7BCY0|V7BCY0_PHAVU4.962e-5990.57Peptidylprolyl isomerase OS=Phaseolus vulgaris OX=... [more]
tr|A0A0L9UVG5|A0A0L9UVG5_PHAAN5.029e-5991.51Peptidylprolyl isomerase OS=Phaseolus angularis OX... [more]
tr|A0A4D6MJU4|A0A4D6MJU4_VIGUN7.493e-5991.51Peptidylprolyl isomerase OS=Vigna unguiculata OX=3... [more]
tr|A0A151SXG8|A0A151SXG8_CAJCA6.338e-5889.62Peptidylprolyl isomerase OS=Cajanus cajan OX=3821 ... [more]
tr|A0A5J5A7X6|A0A5J5A7X6_9ASTE6.506e-5684.91Peptidylprolyl isomerase OS=Nyssa sinensis OX=5613... [more]
tr|A0A0R0LCV7|A0A0R0LCV7_SOYBN9.814e-5686.79Peptidylprolyl isomerase OS=Glycine max OX=3847 GN... [more]
tr|A0A6A4QND3|A0A6A4QND3_LUPAL1.301e-5584.91Peptidylprolyl isomerase OS=Lupinus albus OX=3870 ... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vigna radiata cv. VC1973A genome v1.0
Date Performed: 2023-06-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR046357Peptidyl-prolyl cis-trans isomerase domain superfamilyGENE3D3.10.50.40coord: 8..102
e-value: 7.8E-12
score: 47.1
NoneNo IPR availableSUPERFAMILY54534FKBP-likecoord: 34..105

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-XM_022785313.1_VrVC1973A-SNU_v1 ID=rna-XM_022785313.1_VrVC1973A-SNU_v1; Name=rna-XM_022785313.1; organism=Vigna radiata; type=mRNA; length=348bp
ATGACCTCGTTGATGTTGTTAAAGNTGGAGGTTTGTGATATTGCTGTTCT
TGACATCTCAGCAACAACCATTGATCAAGATGAATCAAATGTTAAAAATA
TTCCTTCAAGTAAAGGCTTTAATTTTGATATTGAGGATGGAGACAAGGTA
TTACCAGGTTTCCTTGATTCAATAATTGGAATTCATCGAGGTGAATCAAA
GTCTTTTCCTCTTGTATTTCCTGAAACTTGGAAGCAAGAAAATCTTCGAG
GTGTTCATGCTCAGTTTAATGTTGAATGCGAAGAACTTTTTTACAGAGAT
TTGCCAGAACTGGATGATTCTATTGCTGATAAGCTTCTCCTGGATTAA
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protein sequence of rna-XM_022785313.1_VrVC1973A-SNU_v1

>rna-XM_022785313.1_VrVC1973A-SNU_v1 ID=rna-XM_022785313.1_VrVC1973A-SNU_v1; Name=rna-XM_022785313.1_VrVC1973A-SNU_v1; organism=Vigna radiata; type=polypeptide; length=115bp
MTSLMLLKXEVCDIAVLDISATTIDQDESNVKNIPSSKGFNFDIEDGDKV
LPGFLDSIIGIHRGESKSFPLVFPETWKQENLRGVHAQFNVECEELFYRD
LPELDDSIADKLLLD
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mRNA from alignment at chr08:25212737..25214501+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-XM_022785313.1_VrVC1973A-SNU_v1 ID=rna-XM_022785313.1_VrVC1973A-SNU_v1; Name=rna-XM_022785313.1; organism=Vigna radiata; type=mRNA; length=1765bp; location=Sequence derived from: chr08:25212737..25214501+ (Vigna radiata
AATTAGCTGCACACTTATTATTGTTGCCCTACAGGCTGTAACTAATTTCT
CATGCTATGTGTGTGCACATTTGCATCAATTCACCTGTGTACATTCACGG
ATTGACTATGGTTGACCTAGTGGGGGAGGGGAGGAGGGTTTGGGTAGCTT
GCATGATGTTAAGCTCAAATCTCATTGTCGCCATTGTGCACCAAAAAAAT
TATGCACATCCACAACTTGGTAAAGATATCTGTTTTACTCCCATACACCT
CTCAATATCTTTCCCACATCAGTTAACTAAGTATGTATGCAGCTTCCCAG
TACATCCTTTGGTGGAAGCTCGAAACTCGATATCATTACCTCCAATTTGC
CCAATTCAGGTATGTTCTGCATCTGAGTTCTACATTTTCCTTACAATACT
TGGATATTTGTTCCCATTTCATAGCccaaaaattaatacataataagATA
TGctatcatatattaaaatataagataagcAAAGTGCCATATTAGAATTT
GCTTGTGTCATGTGAATTTTCTTGCAACAAGTTGAGGACTATGTCAACTT
TCTCAATTCTAGAAATTTCCTGAAagcttaaatttgatttttgaactCCT
ATCCTTTcaatttatgtgtttgttttttctgtAAATCTGATATTAGTATA
CTTAGAAATTGCCACACTATCTTTTTCCCTTTgtttatgtttgttatttt
gtgTTTATAACATCATAATTCCAAGCCCTGTTCCGGCACAAAATTTCAGT
ATGTTGAGAACACTATAGTATGCCATGATTATCAGGAGATAAAAATTCAA
GAAAGTACACAGGTGCTAGGTATTGGGGCAATTCCTCGTTCAATTCTTGT
CATCTTAAAGGATGACCTCGTTGATGTTGTTAAAGNTGGAGGTATTCACT
TCAAATTTTGATAACTATTGTATCCCATACactttgatttttaatatatg
actTGATCTAGGGGTTATTACTGCTGGAAATTATGAGCAGGTTTCAATAT
AATGTGTGGTAGCTCTATTTCTCATTCACTAGTATTTGATCTAAGAAATA
TAGTCCTTGAACTATGGTTTTTCCTTTCCGAAAATTATGTACAGGTTTGT
GATATTGCTGTTCTTGACATCTCAGCAACAACCATTGATCAAGATGAatc
aaatgttaaaaatattcctTCAAGTAAAGGTCTGGTGTTGTGCTTGAAGG
ATGATAACGGATAAGTGATGGAAGTGTTTGGTTTTTGTAATAGATCATGC
ATATTTTCCCTCTAAACTTATATTAGTTATGCAggctttaattttgatat
tgagGATGGAGACAAGGTATTACCAGGTTTCCTTGATTCAATAATTGGAA
TTCATCGAGGTGAATCAAAGTCTTTTCCTCTTGTATTTCCTGAAACTTGG
AAGCAAGAAAATCTTCGAGGTGTTCATGCTCAGTTTAATGTAAGTGTCTA
GTGctgaataaaaaagtttaagtttTAGGAACATGAACTGTCATGgttgt
ttttccttttggtCCTTTCATTCATGGTTATTAAAAGTCTCTTTCATTCA
TAACAGGTTGAATGCGAAGAACTTTTTTACAGAGATTTGCCAGAACTGGA
TGATTCTATTGCTGATAAGCTTCTCCTGGATTAAGGCCGAtcaatttttt
gtaataataaatattggttctacagttaatatattatatatacttcaaAT
TTGGTTATATTCGAAGCCTCATGGAAAACCTGTGTTTGGGTTATAATTTC
GATATTTTAGCCTTT
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Coding sequence (CDS) from alignment at chr08:25212737..25214501+

>rna-XM_022785313.1_VrVC1973A-SNU_v1 ID=rna-XM_022785313.1_VrVC1973A-SNU_v1; Name=rna-XM_022785313.1; organism=Vigna radiata; type=CDS; length=348bp; location=Sequence derived from: chr08:25212737..25214501+ (Vigna radiata
ATGACCTCGTTGATGTTGTTAAAGNTGGAGGTTTGTGATATTGCTGTTCT
TGACATCTCAGCAACAACCATTGATCAAGATGAatcaaatgttaaaaata
ttcctTCAAGTAAAGgctttaattttgatattgagGATGGAGACAAGGTA
TTACCAGGTTTCCTTGATTCAATAATTGGAATTCATCGAGGTGAATCAAA
GTCTTTTCCTCTTGTATTTCCTGAAACTTGGAAGCAAGAAAATCTTCGAG
GTGTTCATGCTCAGTTTAATGTTGAATGCGAAGAACTTTTTTACAGAGAT
TTGCCAGAACTGGATGATTCTATTGCTGATAAGCTTCTCCTGGATTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR046357PPIase_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003755peptidyl-prolyl cis-trans isomerase activity