rna-XM_027334214.1

Transcript Overview
Namerna-XM_027334214.1
Unique Namerna-XM_027334214.1_CaCDCfrontier-NCBI_v1
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length729
Productuncharacterized LOC101507417, transcript variant X2
References
External references for this mRNA
DatabaseAccession
GeneID101507417
GenBankXM_027334214.1
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr5chromosomechr5:45311353..45314180 -Cicer arietinum CDC Frontier NCBI RefSeq v1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ancanL0172Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
cacanL143Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancanL0302Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
cacanL147Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cacanL189Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancanL0350Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascanL517Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ancanL0702Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
cancanL104Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cancanL132Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cancanL137Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
caicanL0536Cicer arietinum ICC 4958 genome v2Cicer arietinum
canccR0662Cajanus cajan Asha genome v1.0Cajanus cajan
canccR0667Cajanus cajan Asha genome v1.0Cajanus cajan
cancrR476Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
cancrR483Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
cancrR497Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
canvrvR360Vigna radiata cv. VC1973A genome v6.0Vigna radiata
canpvR405Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
cantifR344Vicia faba cv. Tiffany genome v1.0Vicia faba
canpvR449Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
canvfhR355Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cantifR366Vicia faba cv. Tiffany genome v1.0Vicia faba
cantifR369Vicia faba cv. Tiffany genome v1.0Vicia faba
canvfhR378Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
canvfhR384Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
canvfhR394Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
canpvR499Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
canvssR402Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvssR420Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvssR444Vicia sativa cv. Studenica genome v1.0Vicia sativa
canzwsR306Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canzwsR328Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canvuaR376Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuR369Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canzwsR341Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
canvuR411Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
canpsR417Pisum sativum Cameor genome v1aPisum sativum
canpsR445Pisum sativum Cameor genome v1aPisum sativum
avjcanL128Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcanL497Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cancarR306Cicer arietinum
cancarR308Cicer arietinum
cancarR343Cicer arietinum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LOC101507417gene-LOC101507417_CaCDCfrontier-NCBI_v1Cicer arietinumgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_027334214.1-4exon-XM_027334214.1-4_CaCDCfrontier-NCBI_v1Cicer arietinumexon
exon-XM_027334214.1-3exon-XM_027334214.1-3_CaCDCfrontier-NCBI_v1Cicer arietinumexon
exon-XM_027334214.1-2exon-XM_027334214.1-2_CaCDCfrontier-NCBI_v1Cicer arietinumexon
exon-XM_027334214.1-1exon-XM_027334214.1-1_CaCDCfrontier-NCBI_v1Cicer arietinumexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-XP_027190015.1cds-XP_027190015.1_CaCDCfrontier-NCBI_v1_4Cicer arietinumCDS
cds-XP_027190015.1cds-XP_027190015.1_CaCDCfrontier-NCBI_v1_3Cicer arietinumCDS
cds-XP_027190015.1cds-XP_027190015.1_CaCDCfrontier-NCBI_v1_2Cicer arietinumCDS
cds-XP_027190015.1cds-XP_027190015.1_CaCDCfrontier-NCBI_v1Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-XM_027334214.1_CaCDCfrontier-NCBI_v1rna-XM_027334214.1_CaCDCfrontier-NCBI_v1Cicer arietinumpolypeptide
rna-XM_027334214.1_CaCDCfrontier-NCBI_v1rna-XM_027334214.1_CaCDCfrontier-NCBI_v1-proteinCicer arietinumpolypeptide


Homology
[Close]
BLAST of rna-XM_027334214.1 vs. Araport11
Match: | (Symbols: CCT101 | "CONSTANS, CO-like and TOC1 motif;" | chr5:21673683-21675469 FORWARD LENGTH=264)

HSP 1 Score: 239.195 bits (609), Expect = 4.573e-79
Identity = 133/240 (55.42%), Postives = 168/240 (70.00%), Query Frame = 0 
Query:    4 LVHFSAMSEYDFAAEGDLFKAPEPIIEEPDIDLDPMTAAISMISCGEDVKST-----DISILQN-EQLLSDVFYECKKDLFEKAAMESPLSEILEIKVPLLNIDE-NIIQENKPFPDMLLPKSVSSGSLSSMDWMHGSAMKPGFLGIQGVDFDAVYGMRRSFSEGDIKTLGKGNMSTVQSPVERPFFSSNCSSEERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKNEE 236
             V  S +SEYD   E DLF+AP+PI+EEP + +DP++AA++MISCGED         D+  LQ+ +QLL   FYEC++DL  K+AMESP S++L+IK    NI     I EN+      + KSVSSG+LSSMDW H  A +   +     DFD  YGMRR+FSEGDI+ LG G    VQSP++R   S  C+SE+R +KLSRY+NKK++RNFGRKIKYACRKALADSQPR+RGRFAK EE
Sbjct:   39 FVESSNISEYDIGEESDLFRAPDPILEEPILTVDPLSAALTMISCGEDTSQGLCELPDLGSLQSGQQLLDKAFYECEQDLMMKSAMESPFSDVLDIK----NISVVTTINENQD-----MQKSVSSGNLSSMDWSH--AQQETVMIQNFPDFDFGYGMRRAFSEGDIQKLGAG---LVQSPLDRIIVS--CTSEDRREKLSRYKNKKSRRNFGRKIKYACRKALADSQPRVRGRFAKTEE 262
[Close]
BLAST of rna-XM_027334214.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:13890858-13892777 FORWARD LENGTH=261)

HSP 1 Score: 232.646 bits (592), Expect = 1.718e-76
Identity = 130/238 (54.62%), Postives = 167/238 (70.17%), Query Frame = 0 
Query:    3 ELVHFSAMSEYDFAAEGDLFKAPEPIIEEPDIDLDPMTAAISMISCGEDVKSTDISILQ-NEQLLSDVFYECKKDLFEKAAMESPLSEILEIK-VPLL-NIDENIIQENKPFPDMLLPKSVSSGSLSSMDWM-HGSAMKPGFLGIQGVDFDAVYGMRRSFSEGDIKTLGKGNMSTVQSPVERPFFSSNCSSEERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKNEE 236
            E+ +    SEYDF  E DLFKAPEPIIEEP + +DP++  +        V+  D+  LQ ++QL+   FY+C++DL  K+AMESPLSE+L+IK + L+  +D ++   +    D+ +PKSVSSG+LSSMD + H  A+  GF     VD    YGMRR+FSE DI+TLG GN   VQS ++R   S  C+SE+R +KLSRYRNKK+KRNFGRKIKYACRKALADSQPRIRGRFAK EE
Sbjct:   35 EMNNLVEASEYDFGEESDLFKAPEPIIEEPMLAVDPLSQEL--------VELGDLGSLQSDQQLIDKAFYDCEQDLLVKSAMESPLSEVLDIKNISLVAKMDNDVKSTSVVVSDVPIPKSVSSGNLSSMDMVEHKDAVIQGFPDFPPVD----YGMRRAFSESDIQTLGTGNTGLVQSQLDRIIIS--CTSEDRREKLSRYRNKKSKRNFGRKIKYACRKALADSQPRIRGRFAKTEE 258
[Close]
BLAST of rna-XM_027334214.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:13890858-13892777 FORWARD LENGTH=261)

HSP 1 Score: 232.646 bits (592), Expect = 1.718e-76
Identity = 130/238 (54.62%), Postives = 167/238 (70.17%), Query Frame = 0 
Query:    3 ELVHFSAMSEYDFAAEGDLFKAPEPIIEEPDIDLDPMTAAISMISCGEDVKSTDISILQ-NEQLLSDVFYECKKDLFEKAAMESPLSEILEIK-VPLL-NIDENIIQENKPFPDMLLPKSVSSGSLSSMDWM-HGSAMKPGFLGIQGVDFDAVYGMRRSFSEGDIKTLGKGNMSTVQSPVERPFFSSNCSSEERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKNEE 236
            E+ +    SEYDF  E DLFKAPEPIIEEP + +DP++  +        V+  D+  LQ ++QL+   FY+C++DL  K+AMESPLSE+L+IK + L+  +D ++   +    D+ +PKSVSSG+LSSMD + H  A+  GF     VD    YGMRR+FSE DI+TLG GN   VQS ++R   S  C+SE+R +KLSRYRNKK+KRNFGRKIKYACRKALADSQPRIRGRFAK EE
Sbjct:   35 EMNNLVEASEYDFGEESDLFKAPEPIIEEPMLAVDPLSQEL--------VELGDLGSLQSDQQLIDKAFYDCEQDLLVKSAMESPLSEVLDIKNISLVAKMDNDVKSTSVVVSDVPIPKSVSSGNLSSMDMVEHKDAVIQGFPDFPPVD----YGMRRAFSESDIQTLGTGNTGLVQSQLDRIIIS--CTSEDRREKLSRYRNKKSKRNFGRKIKYACRKALADSQPRIRGRFAKTEE 258
[Close]
BLAST of rna-XM_027334214.1 vs. Araport11
Match: | (Symbols: CCT101 | "CONSTANS, CO-like and TOC1 motif;" | chr5:21674700-21675469 FORWARD LENGTH=185)

HSP 1 Score: 192.586 bits (488), Expect = 8.887e-62
Identity = 112/199 (56.28%), Postives = 137/199 (68.84%), Query Frame = 0 
Query:   45 MISCGEDVKST-----DISILQN-EQLLSDVFYECKKDLFEKAAMESPLSEILEIKVPLLNIDE-NIIQENKPFPDMLLPKSVSSGSLSSMDWMHGSAMKPGFLGIQGVDFDAVYGMRRSFSEGDIKTLGKGNMSTVQSPVERPFFSSNCSSEERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKNEE 236
            MISCGED         D+  LQ+ +QLL   FYEC++DL  K+AMESP S++L+IK    NI     I EN+      + KSVSSG+LSSMDW H  A +   +     DFD  YGMRR+FSEGDI+ LG G    VQSP++R   S  C+SE+R +KLSRY+NKK++RNFGRKIKYACRKALADSQPR+RGRFAK EE
Sbjct:    1 MISCGEDTSQGLCELPDLGSLQSGQQLLDKAFYECEQDLMMKSAMESPFSDVLDIK----NISVVTTINENQD-----MQKSVSSGNLSSMDWSH--AQQETVMIQNFPDFDFGYGMRRAFSEGDIQKLGAG---LVQSPLDRIIVS--CTSEDRREKLSRYKNKKSRRNFGRKIKYACRKALADSQPRVRGRFAKTEE 183
[Close]
BLAST of rna-XM_027334214.1 vs. Araport11
Match: | (Symbols: CCT101 | "CONSTANS, CO-like and TOC1 motif;" | chr5:21674700-21675469 FORWARD LENGTH=185)

HSP 1 Score: 192.586 bits (488), Expect = 8.887e-62
Identity = 112/199 (56.28%), Postives = 137/199 (68.84%), Query Frame = 0 
Query:   45 MISCGEDVKST-----DISILQN-EQLLSDVFYECKKDLFEKAAMESPLSEILEIKVPLLNIDE-NIIQENKPFPDMLLPKSVSSGSLSSMDWMHGSAMKPGFLGIQGVDFDAVYGMRRSFSEGDIKTLGKGNMSTVQSPVERPFFSSNCSSEERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKNEE 236
            MISCGED         D+  LQ+ +QLL   FYEC++DL  K+AMESP S++L+IK    NI     I EN+      + KSVSSG+LSSMDW H  A +   +     DFD  YGMRR+FSEGDI+ LG G    VQSP++R   S  C+SE+R +KLSRY+NKK++RNFGRKIKYACRKALADSQPR+RGRFAK EE
Sbjct:    1 MISCGEDTSQGLCELPDLGSLQSGQQLLDKAFYECEQDLMMKSAMESPFSDVLDIK----NISVVTTINENQD-----MQKSVSSGNLSSMDWSH--AQQETVMIQNFPDFDFGYGMRRAFSEGDIQKLGAG---LVQSPLDRIIVS--CTSEDRREKLSRYKNKKSRRNFGRKIKYACRKALADSQPRVRGRFAKTEE 183
[Close]
BLAST of rna-XM_027334214.1 vs. Araport11
Match: | (Symbols: CCT101 | "CONSTANS, CO-like and TOC1 motif;" | chr5:21674700-21675469 FORWARD LENGTH=185)

HSP 1 Score: 192.586 bits (488), Expect = 8.887e-62
Identity = 112/199 (56.28%), Postives = 137/199 (68.84%), Query Frame = 0 
Query:   45 MISCGEDVKST-----DISILQN-EQLLSDVFYECKKDLFEKAAMESPLSEILEIKVPLLNIDE-NIIQENKPFPDMLLPKSVSSGSLSSMDWMHGSAMKPGFLGIQGVDFDAVYGMRRSFSEGDIKTLGKGNMSTVQSPVERPFFSSNCSSEERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKNEE 236
            MISCGED         D+  LQ+ +QLL   FYEC++DL  K+AMESP S++L+IK    NI     I EN+      + KSVSSG+LSSMDW H  A +   +     DFD  YGMRR+FSEGDI+ LG G    VQSP++R   S  C+SE+R +KLSRY+NKK++RNFGRKIKYACRKALADSQPR+RGRFAK EE
Sbjct:    1 MISCGEDTSQGLCELPDLGSLQSGQQLLDKAFYECEQDLMMKSAMESPFSDVLDIK----NISVVTTINENQD-----MQKSVSSGNLSSMDWSH--AQQETVMIQNFPDFDFGYGMRRAFSEGDIQKLGAG---LVQSPLDRIIVS--CTSEDRREKLSRYKNKKSRRNFGRKIKYACRKALADSQPRVRGRFAKTEE 183
[Close]
BLAST of rna-XM_027334214.1 vs. Araport11
Match: | (Symbols: CCT101 | "CONSTANS, CO-like and TOC1 motif;" | chr5:21673683-21675080 FORWARD LENGTH=205)

HSP 1 Score: 140.584 bits (353), Expect = 2.846e-41
Identity = 83/169 (49.11%), Postives = 109/169 (64.50%), Query Frame = 0 
Query:    4 LVHFSAMSEYDFAAEGDLFKAPEPIIEEPDIDLDPMTAAISMISCGEDVKST-----DISILQN-EQLLSDVFYECKKDLFEKAAMESPLSEILEIKVPLLNID-ENIIQENKPFPDMLLPKSVSSGSLSSMDWMHGSAMKPGFLGIQGVDFDAVYGMRRSFSEGDIKT 165
             V  S +SEYD   E DLF+AP+PI+EEP + +DP++AA++MISCGED         D+  LQ+ +QLL   FYEC++DL  K+AMESP S++L+IK    NI     I EN+      + KSVSSG+LSSMDW H  A +   +     DFD  YGMRR+FSEGDI+ 
Sbjct:   39 FVESSNISEYDIGEESDLFRAPDPILEEPILTVDPLSAALTMISCGEDTSQGLCELPDLGSLQSGQQLLDKAFYECEQDLMMKSAMESPFSDVLDIK----NISVVTTINENQD-----MQKSVSSGNLSSMDWSH--AQQETVMIQNFPDFDFGYGMRRAFSEGDIQV 196
[Close]
BLAST of rna-XM_027334214.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:23682529-23684050 REVERSE LENGTH=293)

HSP 1 Score: 86.6557 bits (213), Expect = 6.183e-20
Identity = 45/98 (45.92%), Postives = 63/98 (64.29%), Query Frame = 0 
Query:  154 MRRSFSEGDIKTLGK---------------GNMSTVQSPVERPFFSSNCSSEERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKNEE 236
            MRR +S GD++ LG+                + +TV S  E+       SSEER +K+S+YR K+T+RNF + IKYACRK LAD++PR+RGRFA+N+E
Sbjct:  139 MRRVYSTGDLQNLGRDFTGQRSYSSPLAAESSPTTVFSGDEQSLRVGRYSSEERKEKISKYRAKRTQRNFTKTIKYACRKTLADNRPRVRGRFARNDE 236
[Close]
BLAST of rna-XM_027334214.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:16562129-16563553 REVERSE LENGTH=307)

HSP 1 Score: 84.3445 bits (207), Expect = 5.638e-19
Identity = 43/88 (48.86%), Postives = 60/88 (68.18%), Query Frame = 0 
Query:  154 MRRSFSEGDIKTLGKGNMSTVQSPV----ERPFFSSNCSSEERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKNEEC 237
            MRR +S GD++   +   S+  S +    E+ F     S+EER +K+S+YR K+ +RNF + IKYACRK LADS+PRIRGRFA+N+E 
Sbjct:  173 MRRVYSTGDLQNNMEMQRSSENSTMPFSEEQNFKVGRYSAEERKEKISKYRAKRNQRNFTKTIKYACRKTLADSRPRIRGRFARNDEV 260
[Close]
BLAST of rna-XM_027334214.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr2:14134116-14136836 FORWARD LENGTH=409)

HSP 1 Score: 80.1073 bits (196), Expect = 4.220e-17
Identity = 42/100 (42.00%), Postives = 58/100 (58.00%), Query Frame = 0 
Query:  154 MRRSFSEGDIKTLGKG--NMSTVQSPVERPFFS---------------SNCSSEERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKNEE 236
            ++R F+  D++ LG G  N S + +P   P                     S E+R +K+ RY  K+ +RNF +KIKYACRK LADS+PR+RGRFAKN+E
Sbjct:  255 IKRMFNPEDLQALGGGAENQSHLVTPQAHPALGPVDINGLEDSTLNKVGKLSPEQRKEKIRRYMKKRNERNFNKKIKYACRKTLADSRPRVRGRFAKNDE 354
[Close]
BLAST of rna-XM_027334214.1 vs. UniProtKB/Swiss-Prot
Match: sp|O82117|CO3_ORYSJ (Zinc finger protein CO3 OS=Oryza sativa subsp. japonica OX=39947 GN=CO3 PE=2 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 1.699e-8
Identity = 33/85 (38.82%), Postives = 46/85 (54.12%), Query Frame = 0 
Query:  154 MRRSFSEGDIKTLGKGNMSTVQSPVERPFFSSNCSSEERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKNEECD 238
            +R S S  D+ T   G+     S +  P F      E R+    RYR K+  R F + I+YA RKA A+++PRI+GRFAK  + D
Sbjct:  233 LRSSKSTIDLFTAAAGSPVAAHSIMSPPQFMGAIDREARVH---RYREKRKTRRFEKTIRYASRKAYAETRPRIKGRFAKRSDTD 314
[Close]
BLAST of rna-XM_027334214.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9FHH8|COL5_ARATH (Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=COL5 PE=2 SV=2)

HSP 1 Score: 55.8398 bits (133), Expect = 6.617e-8
Identity = 26/49 (53.06%), Postives = 35/49 (71.43%), Query Frame = 0 
Query:  188 SSEERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKNEE 236
            SS +R  ++ RYR K+  R F + I+YA RKA A+S+PRI+GRFAK  E
Sbjct:  281 SSMDREARVLRYREKRKNRKFEKTIRYASRKAYAESRPRIKGRFAKRTE 329
[Close]
BLAST of rna-XM_027334214.1 vs. UniProtKB/Swiss-Prot
Match: sp|E5RQA1|GHD7_ORYSJ (Transcription factor GHD7 OS=Oryza sativa subsp. japonica OX=39947 GN=GHD7 PE=1 SV=1)

HSP 1 Score: 53.9138 bits (128), Expect = 2.127e-7
Identity = 25/49 (51.02%), Postives = 36/49 (73.47%), Query Frame = 0 
Query:  191 ERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKNEECDA 239
            ER  KL RY+ K+ KR + ++I+YA RKA A+ +PR+RGRFAK  + +A
Sbjct:  189 EREAKLMRYKEKRKKRCYEKQIRYASRKAYAEMRPRVRGRFAKEPDQEA 237
[Close]
BLAST of rna-XM_027334214.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q940T9|COL4_ARATH (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=COL4 PE=2 SV=2)

HSP 1 Score: 53.1434 bits (126), Expect = 4.849e-7
Identity = 24/49 (48.98%), Postives = 34/49 (69.39%), Query Frame = 0 
Query:  188 SSEERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKNEE 236
            +S ER  ++ RYR K+  R F + I+YA RKA A+ +PRI+GRFAK  +
Sbjct:  291 TSAEREARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTD 339
[Close]
BLAST of rna-XM_027334214.1 vs. UniProtKB/Swiss-Prot
Match: sp|O50055|COL1_ARATH (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=COL1 PE=1 SV=1)

HSP 1 Score: 53.1434 bits (126), Expect = 5.755e-7
Identity = 25/51 (49.02%), Postives = 35/51 (68.63%), Query Frame = 0 
Query:  188 SSEERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKNEECD 238
            S  +R  ++ RYR KK  R F + I+YA RKA A+ +PRI+GRFAK ++ D
Sbjct:  282 SPRDREARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAKKKDVD 332
[Close]
BLAST of rna-XM_027334214.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LJ44|COL12_ARATH (Zinc finger protein CONSTANS-LIKE 12 OS=Arabidopsis thaliana OX=3702 GN=COL12 PE=1 SV=2)

HSP 1 Score: 52.373 bits (124), Expect = 8.638e-7
Identity = 25/51 (49.02%), Postives = 35/51 (68.63%), Query Frame = 0 
Query:  183 FSSNCSSEERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAK 233
            F  +C       KL RY+ KK KR+FG++I+YA RKA AD++ R++GRF K
Sbjct:  299 FEVSCPQARNEAKL-RYKEKKLKRSFGKQIRYASRKARADTRKRVKGRFVK 348
[Close]
BLAST of rna-XM_027334214.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q96502|COL2_ARATH (Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=COL2 PE=1 SV=1)

HSP 1 Score: 52.373 bits (124), Expect = 8.665e-7
Identity = 24/43 (55.81%), Postives = 31/43 (72.09%), Query Frame = 0 
Query:  191 ERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAK 233
            ER  ++ RYR KK  R F + I+YA RKA A+ +PRI+GRFAK
Sbjct:  277 EREARVLRYREKKKTRKFDKTIRYASRKAYAEIRPRIKGRFAK 319
[Close]
BLAST of rna-XM_027334214.1 vs. UniProtKB/TrEMBL
Match: tr|A0A3Q7YF76|A0A3Q7YF76_CICAR (Uncharacterized protein LOC101507417 isoform X2 OS=Cicer arietinum OX=3827 GN=LOC101507417 PE=4 SV=1)

HSP 1 Score: 497.664 bits (1280), Expect = 7.476e-178
Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0 
Query:    1 MSELVHFSAMSEYDFAAEGDLFKAPEPIIEEPDIDLDPMTAAISMISCGEDVKSTDISILQNEQLLSDVFYECKKDLFEKAAMESPLSEILEIKVPLLNIDENIIQENKPFPDMLLPKSVSSGSLSSMDWMHGSAMKPGFLGIQGVDFDAVYGMRRSFSEGDIKTLGKGNMSTVQSPVERPFFSSNCSSEERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKNEECDAKRE 242
            MSELVHFSAMSEYDFAAEGDLFKAPEPIIEEPDIDLDPMTAAISMISCGEDVKSTDISILQNEQLLSDVFYECKKDLFEKAAMESPLSEILEIKVPLLNIDENIIQENKPFPDMLLPKSVSSGSLSSMDWMHGSAMKPGFLGIQGVDFDAVYGMRRSFSEGDIKTLGKGNMSTVQSPVERPFFSSNCSSEERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKNEECDAKRE
Sbjct:    1 MSELVHFSAMSEYDFAAEGDLFKAPEPIIEEPDIDLDPMTAAISMISCGEDVKSTDISILQNEQLLSDVFYECKKDLFEKAAMESPLSEILEIKVPLLNIDENIIQENKPFPDMLLPKSVSSGSLSSMDWMHGSAMKPGFLGIQGVDFDAVYGMRRSFSEGDIKTLGKGNMSTVQSPVERPFFSSNCSSEERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKNEECDAKRE 242
[Close]
BLAST of rna-XM_027334214.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2YC52|A0A1S2YC52_CICAR (Uncharacterized protein LOC101507417 isoform X1 OS=Cicer arietinum OX=3827 GN=LOC101507417 PE=4 SV=1)

HSP 1 Score: 498.049 bits (1281), Expect = 1.966e-177
Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0 
Query:    1 MSELVHFSAMSEYDFAAEGDLFKAPEPIIEEPDIDLDPMTAAISMISCGEDVKSTDISILQNEQLLSDVFYECKKDLFEKAAMESPLSEILEIKVPLLNIDENIIQENKPFPDMLLPKSVSSGSLSSMDWMHGSAMKPGFLGIQGVDFDAVYGMRRSFSEGDIKTLGKGNMSTVQSPVERPFFSSNCSSEERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKNEECDAKRE 242
            MSELVHFSAMSEYDFAAEGDLFKAPEPIIEEPDIDLDPMTAAISMISCGEDVKSTDISILQNEQLLSDVFYECKKDLFEKAAMESPLSEILEIKVPLLNIDENIIQENKPFPDMLLPKSVSSGSLSSMDWMHGSAMKPGFLGIQGVDFDAVYGMRRSFSEGDIKTLGKGNMSTVQSPVERPFFSSNCSSEERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKNEECDAKRE
Sbjct:   37 MSELVHFSAMSEYDFAAEGDLFKAPEPIIEEPDIDLDPMTAAISMISCGEDVKSTDISILQNEQLLSDVFYECKKDLFEKAAMESPLSEILEIKVPLLNIDENIIQENKPFPDMLLPKSVSSGSLSSMDWMHGSAMKPGFLGIQGVDFDAVYGMRRSFSEGDIKTLGKGNMSTVQSPVERPFFSSNCSSEERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKNEECDAKRE 278
[Close]
BLAST of rna-XM_027334214.1 vs. UniProtKB/TrEMBL
Match: tr|A0A072V0W7|A0A072V0W7_MEDTR (CCT motif protein OS=Medicago truncatula OX=3880 GN=11446456 PE=4 SV=1)

HSP 1 Score: 420.624 bits (1080), Expect = 2.080e-147
Identity = 221/245 (90.20%), Postives = 229/245 (93.47%), Query Frame = 0 
Query:    1 MSELVHFSAMSEYDFAAEGDLFKAPEPIIEEPDIDLDPMTAAISMISCGEDVKSTDISILQNEQLLSDVFYECKKDLFEKAAMESPLSEILEIKVPLLNIDENIIQENKPFPDM-LLPKSVSSGSLSSMDWMHGS-AMKPGFLGIQGVDFDAVYGMRRSFSEGDIKTLGKGNMSTVQSPVERPFFSSNCSSEERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKNEECD-AKRE 242
            MS+LV FSAMSEYDFAAEGDLFKAPEP+IEE  IDLDPMTAAISMISCGEDVKSTDISILQNEQLLSDVFY+CKKDLFEKA MESPLSEILEIKVPLLNIDENIIQENKP PDM LL KSVSSGSLSSMDWMHGS AMKP FLGI G+DFDAVYGMRRSFSEGDIKT G  NM+ VQSPVERPFF+SNCSSEERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPR+RGRFAKNEE D AK+E
Sbjct:    1 MSDLVQFSAMSEYDFAAEGDLFKAPEPMIEESGIDLDPMTAAISMISCGEDVKSTDISILQNEQLLSDVFYDCKKDLFEKAGMESPLSEILEIKVPLLNIDENIIQENKPLPDMPLLLKSVSSGSLSSMDWMHGSAAMKPAFLGISGIDFDAVYGMRRSFSEGDIKTFGNANMNVVQSPVERPFFTSNCSSEERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRVRGRFAKNEETDQAKKE 245
[Close]
BLAST of rna-XM_027334214.1 vs. UniProtKB/TrEMBL
Match: tr|A0A072V279|A0A072V279_MEDTR (CCT motif protein OS=Medicago truncatula OX=3880 GN=11446456 PE=4 SV=1)

HSP 1 Score: 418.698 bits (1075), Expect = 1.579e-146
Identity = 220/244 (90.16%), Postives = 228/244 (93.44%), Query Frame = 0 
Query:    2 SELVHFSAMSEYDFAAEGDLFKAPEPIIEEPDIDLDPMTAAISMISCGEDVKSTDISILQNEQLLSDVFYECKKDLFEKAAMESPLSEILEIKVPLLNIDENIIQENKPFPDM-LLPKSVSSGSLSSMDWMHGS-AMKPGFLGIQGVDFDAVYGMRRSFSEGDIKTLGKGNMSTVQSPVERPFFSSNCSSEERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKNEECD-AKRE 242
            S+LV FSAMSEYDFAAEGDLFKAPEP+IEE  IDLDPMTAAISMISCGEDVKSTDISILQNEQLLSDVFY+CKKDLFEKA MESPLSEILEIKVPLLNIDENIIQENKP PDM LL KSVSSGSLSSMDWMHGS AMKP FLGI G+DFDAVYGMRRSFSEGDIKT G  NM+ VQSPVERPFF+SNCSSEERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPR+RGRFAKNEE D AK+E
Sbjct:    9 SDLVQFSAMSEYDFAAEGDLFKAPEPMIEESGIDLDPMTAAISMISCGEDVKSTDISILQNEQLLSDVFYDCKKDLFEKAGMESPLSEILEIKVPLLNIDENIIQENKPLPDMPLLLKSVSSGSLSSMDWMHGSAAMKPAFLGISGIDFDAVYGMRRSFSEGDIKTFGNANMNVVQSPVERPFFTSNCSSEERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRVRGRFAKNEETDQAKKE 252
[Close]
BLAST of rna-XM_027334214.1 vs. UniProtKB/TrEMBL
Match: tr|G7J6V3|G7J6V3_MEDTR (CCT motif protein OS=Medicago truncatula OX=3880 GN=11446456 PE=4 SV=1)

HSP 1 Score: 419.853 bits (1078), Expect = 1.699e-146
Identity = 221/245 (90.20%), Postives = 229/245 (93.47%), Query Frame = 0 
Query:    1 MSELVHFSAMSEYDFAAEGDLFKAPEPIIEEPDIDLDPMTAAISMISCGEDVKSTDISILQNEQLLSDVFYECKKDLFEKAAMESPLSEILEIKVPLLNIDENIIQENKPFPDM-LLPKSVSSGSLSSMDWMHGS-AMKPGFLGIQGVDFDAVYGMRRSFSEGDIKTLGKGNMSTVQSPVERPFFSSNCSSEERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKNEECD-AKRE 242
            MS+LV FSAMSEYDFAAEGDLFKAPEP+IEE  IDLDPMTAAISMISCGEDVKSTDISILQNEQLLSDVFY+CKKDLFEKA MESPLSEILEIKVPLLNIDENIIQENKP PDM LL KSVSSGSLSSMDWMHGS AMKP FLGI G+DFDAVYGMRRSFSEGDIKT G  NM+ VQSPVERPFF+SNCSSEERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPR+RGRFAKNEE D AK+E
Sbjct:   37 MSDLVQFSAMSEYDFAAEGDLFKAPEPMIEESGIDLDPMTAAISMISCGEDVKSTDISILQNEQLLSDVFYDCKKDLFEKAGMESPLSEILEIKVPLLNIDENIIQENKPLPDMPLLLKSVSSGSLSSMDWMHGSAAMKPAFLGISGIDFDAVYGMRRSFSEGDIKTFGNANMNVVQSPVERPFFTSNCSSEERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRVRGRFAKNEETDQAKKE 281
[Close]
BLAST of rna-XM_027334214.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6NI93|A0A2Z6NI93_TRISU (CCT domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_394850 PE=4 SV=1)

HSP 1 Score: 411.764 bits (1057), Expect = 5.061e-144
Identity = 202/234 (86.32%), Postives = 213/234 (91.03%), Query Frame = 0 
Query:   10 MSEYDFAAEGDLFKAPEPIIEEPDIDLDPMTAAISMISCGEDVKSTDISILQNEQLLSDVFYECKKDLFEKAAMESPLSEILEIKVPLLNIDENIIQENKPFPDMLLPKSVSSGSLSSMDWMHGS-AMKPGFLGIQGVDFDAVYGMRRSFSEGDIKTLGKGNMSTVQSPVERPFFSSNCSSEERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKNEECDAKRE 242
            MSEYDFAAEGDLFKAPEPIIEEP ID+DPMT+AISMISCGEDVKS DISILQNEQLLSDVFY+CKKDLFEK AMESPLSEILEIKVPLL+IDEN IQEN+  PDM LPKSVSSG LSSMDWMHGS AMKP FLG+  +DFDAVYGMRRSFSEGDIKTLG GNM+TV+SP ERPFF+   SSEERLQKLSRYRNKK KRNFGRKIKYACRKALADSQPRIRGRFAKNEE +  RE
Sbjct:    1 MSEYDFAAEGDLFKAPEPIIEEPGIDMDPMTSAISMISCGEDVKSADISILQNEQLLSDVFYDCKKDLFEKTAMESPLSEILEIKVPLLSIDENTIQENRQLPDMTLPKSVSSGCLSSMDWMHGSAAMKPAFLGVSEIDFDAVYGMRRSFSEGDIKTLGNGNMNTVESPRERPFFT---SSEERLQKLSRYRNKKAKRNFGRKIKYACRKALADSQPRIRGRFAKNEESETNRE 231
[Close]
BLAST of rna-XM_027334214.1 vs. UniProtKB/TrEMBL
Match: tr|A0A9D4WPW2|A0A9D4WPW2_PEA (CCT domain-containing protein OS=Pisum sativum OX=3888 GN=KIW84_052396 PE=4 SV=1)

HSP 1 Score: 403.675 bits (1036), Expect = 3.435e-140
Identity = 206/244 (84.43%), Postives = 220/244 (90.16%), Query Frame = 0 
Query:    1 MSELVHFSAMSEYDFAAEGDLFKAPEPIIEEPDIDLDPMTAAISMISCGEDVKSTDISILQNEQLLSDVFYECKKDLFEKAAMESPLSEILEIKVPLLNIDENIIQENKPFPDM-LLPKSVSSGSLSSMDWMHGSAMKPGFLGIQGVDFDAVYGMRRSFSEGDIKTLGKG-NMSTVQSPVERPFFSSNCSSEERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKNEECDAKRE 242
            MS++V FSAMSEYDFAAEGDLFKAPE IIEE DIDLDPMTAAISMISC ED+KSTDISILQNEQLLSDVFYECKKDL EK  MESPLSEILEI++PLLNIDEN +QENKP PDM LLPKSVSS SLSSMDWMHGSAM P   G+ G+DFDAVYG+RRSFSEGDIKTLG G N++TVQS  ERPF    C++EERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKNEEC+AKRE
Sbjct:   37 MSDIVQFSAMSEYDFAAEGDLFKAPEAIIEESDIDLDPMTAAISMISCDEDIKSTDISILQNEQLLSDVFYECKKDLLEKTVMESPLSEILEIRIPLLNIDENAVQENKPLPDMPLLPKSVSSRSLSSMDWMHGSAMNPAVFGVSGIDFDAVYGIRRSFSEGDIKTLGNGNNVNTVQSSRERPFL---CNNEERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKNEECEAKRE 277
[Close]
BLAST of rna-XM_027334214.1 vs. UniProtKB/TrEMBL
Match: tr|A0A392MF40|A0A392MF40_9FABA (Zinc finger protein CONSTANS-like protein OS=Trifolium medium OX=97028 GN=A2U01_0006974 PE=4 SV=1)

HSP 1 Score: 398.282 bits (1022), Expect = 1.078e-138
Identity = 197/234 (84.19%), Postives = 209/234 (89.32%), Query Frame = 0 
Query:   10 MSEYDFAAEGDLFKAPEPIIEEPDIDLDPMTAAISMISCGEDVKSTDISILQNEQLLSDVFYECKKDLFEKAAMESPLSEILEIKVPLLNIDENIIQENKPFPDMLLPKSVSSGSLSSMDWMHGS-AMKPGFLGIQGVDFDAVYGMRRSFSEGDIKTLGKGNMSTVQSPVERPFFSSNCSSEERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKNEECDAKRE 242
            MSEYDFAAEGDLFKAPE IIEE  I++DPMT+AISMISCGEDVKS DISILQNEQLLSDVFY+CKKDLFEK AMESPLSEILEIK PLL+IDEN IQENK  PDM L KSVSSG LSSMDWMHGS AMKP FLG+  +DFDAVYGMRRSFS+GDIKTL  GNM+TV+SP ERPFF+   SSEERLQKLSRYRNKK KRNFGRKIKYACRKALADSQPRIRGRFAKNEE +A RE
Sbjct:    1 MSEYDFAAEGDLFKAPELIIEESGIEMDPMTSAISMISCGEDVKSADISILQNEQLLSDVFYDCKKDLFEKTAMESPLSEILEIKXPLLSIDENTIQENKQLPDMTLSKSVSSGCLSSMDWMHGSAAMKPAFLGVSEIDFDAVYGMRRSFSDGDIKTLSNGNMNTVESPRERPFFT---SSEERLQKLSRYRNKKAKRNFGRKIKYACRKALADSQPRIRGRFAKNEESEANRE 231
[Close]
BLAST of rna-XM_027334214.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3VHG6|A0A1S3VHG6_VIGRR (Uncharacterized protein LOC106775112 isoform X4 OS=Vigna radiata var. radiata OX=3916 GN=LOC106775112 PE=4 SV=1)

HSP 1 Score: 391.734 bits (1005), Expect = 6.943e-136
Identity = 200/247 (80.97%), Postives = 218/247 (88.26%), Query Frame = 0 
Query:    1 MSELVHFSAMSEYDFAAEGDLFKAPEPIIEEPDIDLDPMTAAISMISCGEDV-----KSTDISILQNEQLLSDVFYECKKDLFEKAAMESPLSEILEIKVPLLNIDENIIQENKPFPDMLLPKSVSSGSLSSMDWMHGSAMKPGFLGIQGVDFDAVYGMRRSFSEGDIKTLGKGNMSTVQSPVERPFFSSNCSSEERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKNEECDAKRE 242
            M + V  SAMSEYD AAEGDLFKAPEPIIEEP +DLDPMTAAISMISCGEDV     KSTDI ILQN+Q LS+VFYECKKDL EKAA+ESPLSEILEIKVPLLNIDEN IQEN+P PDM L KSVSSGSLSSMDW+ G AMKP F+ I  +DF+AVYGMRRSFSEGDIKTLG GNM+ VQSP+ERPF  SNC+SEER QKLSRYRNK+TKRNFGRKIKYACRKALADSQPRIRGRFA++EEC++KRE
Sbjct:    1 MDDYVQCSAMSEYDLAAEGDLFKAPEPIIEEPIMDLDPMTAAISMISCGEDVSSQGLKSTDIDILQNDQFLSEVFYECKKDLLEKAAIESPLSEILEIKVPLLNIDENSIQENRPLPDMQLGKSVSSGSLSSMDWIRGVAMKPAFIDIPAMDFNAVYGMRRSFSEGDIKTLGNGNMNIVQSPLERPFLISNCTSEERFQKLSRYRNKRTKRNFGRKIKYACRKALADSQPRIRGRFARSEECESKRE 247
[Close]
BLAST of rna-XM_027334214.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3VHG1|A0A1S3VHG1_VIGRR (Uncharacterized protein LOC106775112 isoform X1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106775112 PE=4 SV=1)

HSP 1 Score: 392.504 bits (1007), Expect = 1.227e-135
Identity = 200/247 (80.97%), Postives = 218/247 (88.26%), Query Frame = 0 
Query:    1 MSELVHFSAMSEYDFAAEGDLFKAPEPIIEEPDIDLDPMTAAISMISCGEDV-----KSTDISILQNEQLLSDVFYECKKDLFEKAAMESPLSEILEIKVPLLNIDENIIQENKPFPDMLLPKSVSSGSLSSMDWMHGSAMKPGFLGIQGVDFDAVYGMRRSFSEGDIKTLGKGNMSTVQSPVERPFFSSNCSSEERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKNEECDAKRE 242
            M + V  SAMSEYD AAEGDLFKAPEPIIEEP +DLDPMTAAISMISCGEDV     KSTDI ILQN+Q LS+VFYECKKDL EKAA+ESPLSEILEIKVPLLNIDEN IQEN+P PDM L KSVSSGSLSSMDW+ G AMKP F+ I  +DF+AVYGMRRSFSEGDIKTLG GNM+ VQSP+ERPF  SNC+SEER QKLSRYRNK+TKRNFGRKIKYACRKALADSQPRIRGRFA++EEC++KRE
Sbjct:   35 MDDYVQCSAMSEYDLAAEGDLFKAPEPIIEEPIMDLDPMTAAISMISCGEDVSSQGLKSTDIDILQNDQFLSEVFYECKKDLLEKAAIESPLSEILEIKVPLLNIDENSIQENRPLPDMQLGKSVSSGSLSSMDWIRGVAMKPAFIDIPAMDFNAVYGMRRSFSEGDIKTLGNGNMNIVQSPLERPFLISNCTSEERFQKLSRYRNKRTKRNFGRKIKYACRKALADSQPRIRGRFARSEECESKRE 281
The following BLAST results are available for this feature:
BLAST of rna-XM_027334214.1 vs. Araport11
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs arabidopsis Araport11)
Total hits: 10
Match NameE-valueIdentityDescription
|4.573e-7955.42Symbols: CCT101 | "CONSTANS, CO-like and TOC1 moti... [more]
|1.718e-7654.62Symbols: no symbol available | no full name availa... [more]
|1.718e-7654.62Symbols: no symbol available | no full name availa... [more]
|8.887e-6256.28Symbols: CCT101 | "CONSTANS, CO-like and TOC1 moti... [more]
|8.887e-6256.28Symbols: CCT101 | "CONSTANS, CO-like and TOC1 moti... [more]
|8.887e-6256.28Symbols: CCT101 | "CONSTANS, CO-like and TOC1 moti... [more]
|2.846e-4149.11Symbols: CCT101 | "CONSTANS, CO-like and TOC1 moti... [more]
|6.183e-2045.92Symbols: no symbol available | no full name availa... [more]
|5.638e-1948.86Symbols: no symbol available | no full name availa... [more]
|4.220e-1742.00Symbols: no symbol available | no full name availa... [more]
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BLAST of rna-XM_027334214.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt Swissprot)
Total hits: 7
Match NameE-valueIdentityDescription
sp|O82117|CO3_ORYSJ1.699e-838.82Zinc finger protein CO3 OS=Oryza sativa subsp. jap... [more]
sp|Q9FHH8|COL5_ARATH6.617e-853.06Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis... [more]
sp|E5RQA1|GHD7_ORYSJ2.127e-751.02Transcription factor GHD7 OS=Oryza sativa subsp. j... [more]
sp|Q940T9|COL4_ARATH4.849e-748.98Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis... [more]
sp|O50055|COL1_ARATH5.755e-749.02Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis... [more]
sp|Q9LJ44|COL12_ARATH8.638e-749.02Zinc finger protein CONSTANS-LIKE 12 OS=Arabidopsi... [more]
sp|Q96502|COL2_ARATH8.665e-755.81Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis... [more]
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BLAST of rna-XM_027334214.1 vs. UniProtKB/TrEMBL
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A3Q7YF76|A0A3Q7YF76_CICAR7.476e-178100.00Uncharacterized protein LOC101507417 isoform X2 OS... [more]
tr|A0A1S2YC52|A0A1S2YC52_CICAR1.966e-177100.00Uncharacterized protein LOC101507417 isoform X1 OS... [more]
tr|A0A072V0W7|A0A072V0W7_MEDTR2.080e-14790.20CCT motif protein OS=Medicago truncatula OX=3880 G... [more]
tr|A0A072V279|A0A072V279_MEDTR1.579e-14690.16CCT motif protein OS=Medicago truncatula OX=3880 G... [more]
tr|G7J6V3|G7J6V3_MEDTR1.699e-14690.20CCT motif protein OS=Medicago truncatula OX=3880 G... [more]
tr|A0A2Z6NI93|A0A2Z6NI93_TRISU5.061e-14486.32CCT domain-containing protein OS=Trifolium subterr... [more]
tr|A0A9D4WPW2|A0A9D4WPW2_PEA3.435e-14084.43CCT domain-containing protein OS=Pisum sativum OX=... [more]
tr|A0A392MF40|A0A392MF40_9FABA1.078e-13884.19Zinc finger protein CONSTANS-like protein OS=Trifo... [more]
tr|A0A1S3VHG6|A0A1S3VHG6_VIGRR6.943e-13680.97Uncharacterized protein LOC106775112 isoform X4 OS... [more]
tr|A0A1S3VHG1|A0A1S3VHG1_VIGRR1.227e-13580.97Uncharacterized protein LOC106775112 isoform X1 OS... [more]
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InterPro
Analysis Name: InterProScan Analysis for Cicer arietinum CDC Frontier NCBI RefSeq v1
Date Performed: 2024-01-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010402CCT domainPFAMPF06203CCTcoord: 192..234
e-value: 1.2E-13
score: 62.2
IPR010402CCT domainPROSITEPS51017CCTcoord: 192..234
score: 14.852278
IPR045281Zinc finger protein CONSTANS-likePANTHERPTHR31319ZINC FINGER PROTEIN CONSTANS-LIKE 4coord: 153..236

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-XM_027334214.1_CaCDCfrontier-NCBI_v1 ID=rna-XM_027334214.1_CaCDCfrontier-NCBI_v1; Name=rna-XM_027334214.1; organism=Cicer arietinum; type=mRNA; length=729bp
ATGAGTGAGCTTGTTCATTTTTCTGCCATGTCAGAATATGATTTTGCTGC
TGAAGGAGATTTGTTCAAAGCACCCGAACCGATTATCGAAGAGCCAGATA
TTGACCTTGATCCCATGACAGCAGCCATCTCAATGATATCTTGTGGAGAG
GATGTAAAATCCACAGATATTTCTATTCTTCAAAACGAACAGCTTTTAAG
TGATGTATTCTATGAATGCAAAAAGGATCTCTTTGAAAAGGCAGCAATGG
AGTCTCCGCTCTCCGAGATTCTTGAAATCAAGGTTCCCCTATTAAACATT
GATGAGAACATAATTCAAGAAAACAAGCCATTTCCTGACATGCTGTTACC
AAAGAGCGTCAGCTCAGGAAGTTTAAGCTCGATGGATTGGATGCATGGAT
CTGCTATGAAGCCTGGTTTCCTTGGTATCCAAGGAGTAGATTTTGATGCA
GTATATGGAATGCGGAGATCATTTAGTGAAGGAGATATAAAGACTCTTGG
CAAAGGTAACATGAGCACGGTCCAATCTCCCGTTGAGAGGCCGTTTTTTA
GCAGCAACTGCAGCAGTGAGGAACGTCTACAAAAGCTCTCTAGATACAGG
AACAAGAAGACAAAGAGAAATTTTGGGAGGAAAATAAAGTATGCTTGCAG
GAAGGCTCTTGCTGACAGTCAACCAAGAATCCGTGGAAGATTTGCAAAGA
ATGAAGAATGTGATGCAAAGAGGGAATGA
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protein sequence of rna-XM_027334214.1_CaCDCfrontier-NCBI_v1

>rna-XM_027334214.1_CaCDCfrontier-NCBI_v1 ID=rna-XM_027334214.1_CaCDCfrontier-NCBI_v1; Name=rna-XM_027334214.1_CaCDCfrontier-NCBI_v1; organism=Cicer arietinum; type=polypeptide; length=242bp
MSELVHFSAMSEYDFAAEGDLFKAPEPIIEEPDIDLDPMTAAISMISCGE
DVKSTDISILQNEQLLSDVFYECKKDLFEKAAMESPLSEILEIKVPLLNI
DENIIQENKPFPDMLLPKSVSSGSLSSMDWMHGSAMKPGFLGIQGVDFDA
VYGMRRSFSEGDIKTLGKGNMSTVQSPVERPFFSSNCSSEERLQKLSRYR
NKKTKRNFGRKIKYACRKALADSQPRIRGRFAKNEECDAKRE
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mRNA from alignment at chr5:45311353..45314180-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-XM_027334214.1_CaCDCfrontier-NCBI_v1 ID=rna-XM_027334214.1_CaCDCfrontier-NCBI_v1; Name=rna-XM_027334214.1; organism=Cicer arietinum; type=mRNA; length=2828bp; location=Sequence derived from: chr5:45311353..45314180- (Cicer arietinum
CACAACCTTAACTAGTTGACATGGTTAGGATTTAAGCCTTTACAGCTTAT
AAGTATTTTGATATGTGTAGATTTGCTCTTCAACAAGATGTTTCTAAGTT
GGTTGCTTTATATATGCCATCTTTTTTTAATGTTTTTGGTTTCTTAGAAA
GGAAAATAGTGATCCTATGTCTCCTTTGGTGCTTGACAGTAATCAGAGAT
TAGTCTCTAATTGGTGGGAGGAAATGGGTTCATCTGGGTATGCATTGATA
CCATTCATCTATGCAAAGCTTCTGCTAAACAATATGAATATGGTTTTGTG
CATTTGTGGTGTGCTATTCCTATTCTATTCCATGGAGTGAATAGGCACAT
TCACCATCGAAATTATAAGTGTCGGTGAAATTAGTTCCTAAATTTTGCGA
GTTGGCAAATGCATTCCTAAAATTGTAAAGTGTCATTCAAAATAGTCCAT
TTGTAAATTTTTATTGTTAGAGACTATGACGTGGTACATTAAATGAATAT
GTGATTCCTTCACTTCACGTTGATCACATATCAATATCATCTCACCAATG
ACTAATTTGTCTATGAAGTTTGGTCATCACTGAAAAATTAATTCCAGAAA
GACCTAAGTTTCATAAGCAAATTAAAATATGGTGTGATGACATTGATGTC
ATATCAATGTTGAGGGGTCCGCATATTCAGTTACTATACCACACCATAAT
CTCATCTGCAAAATTTAGCGACTAGTTTAATTGACCTTTACAGTTTCAAG
GACTAATTTGCCAATTCACTCTATTCTATGTTGTTTATGATTTGTACTGA
AATAAAAAAGTACAAAATCCTTTTCTAGATTTAACCTGCAATATGTACTG
TTTGGATAATAAATACTTAGCCTGAGAATTTACACATATTTTATATTGTG
CTTTGTAACTTTCTGAAAGCATTTCTCGGGTCTTTTACTAACATACTTTT
GCTGTCGCCTCACTATCTCAAAGATTCTCTTTTTCTCTCCTCCCACTTGT
TTTTCTTTTTCTCTTCCTCTTTTTATAAAAGTTGAGAAACAGTGTCTATA
TGGTCTGAATCCCATCCATTAAGCCATGATTTGATCAGGTGGCCATGTAA
TGCATCTGGAATATTTTGCCTTTTCTTAAGAATCTCTTTACTTGGTGGAA
TCATGCAAATAAATATATTATCATGAATTTGTTGTTGGCTTATGTCAGGA
ATCCCATCTTAGAGCCACTTCTTGATATTAAAGTTAAACATGTTGATAGA
AATTGTGAGCAAGGTTATATATATATATCAATTCAGAAAGACAGAAACAA
GTGTTGAATGCTCAAAAATCAGATCACTACAATTGACTATTGGATTATGT
CTTTAATGCAGAGTGAGCTTGTTCATTTTTCTGCCATGTCAGAATATGAT
TTTGCTGCTGAAGGAGATTTGTTCAAAGCACCCGAACCGATTATCGAAGA
GCCAGATATTGACCTTGATCCCATGACAGCAGCCATCTCAATGATATCTT
GTGGAGAGGATGTAAAATCCACAGATATTTCTATTCTTCAAAACGAACAG
CTTTTAAGTGATGTATTCTATGAATGCAAAAAGGATCTCTTTGAAAAGGC
AGCAATGGAGTCTCCGCTCTCCGAGATTCTTGAAATCAAGGTTCCCCTAT
TAAACATTGATGAGAACATAATTCAAGAAAACAAGCCATTTCCTGACATG
CTGTTACCAAAGAGCGTCAGCTCAGGAAGTTTAAGCTCGATGGATTGGAT
GCATGGATCTGCTATGAAGCCTGGTTTCCTTGGTATCCAAGGAGTAGATT
TTGATGCAGTATATGGAATGCGGAGATCATTTAGTGAAGGAGATATAAAG
GTATAACTTTACAGGTCTTAATATTGTGTCTTATTATTAGTTTAATCAAA
TCACTATGAAGTTAAGCTAAGCAACTTCTGATAGATCTAAAAGACTTTTT
TGGTGGTTTTAACCTGAAGTAGGTTAAACAATAGACCTCTGTCGGTCGGT
CTAACTTATTTCCAATGACATTAATTTATGTGATTACATTTAATTATTTT
TATTTTCTTAAATTAAGACTAGTGTCAGTGGCAAAGTCGTATCAGGTGTC
CATGTATGTGCTTCGTACAAACAATTTCTACTCTGAGTTCTTCCTAGTTA
TTTACGAGTTTGGTAAACAAATCTGCCAAAATCTAGTGATTTACTGAAAG
TACAGAAGATGATTTATATTTTTGTGACAGACTCTTGGCAAAGGTAACAT
GAGCACGGTCCAATCTCCCGTTGAGAGGCCGTTTTTTAGCAGCAACTGCA
GCAGTGAGGAACGTCTACAAAAGCTCTCTAGATACAGGAACAAGAAGACA
AAGAGAAATTTTGGGAGGAAAATAAAGGTAACTAATAATAGTTTACTCAT
TTTCTAATATATTTTGGACTATAAAGAGTTTTAAAACTGAAATGATGATT
TTGGGTTGGTTTCAGTATGCTTGCAGGAAGGCTCTTGCTGACAGTCAACC
AAGAATCCGTGGAAGATTTGCAAAGAATGAAGAATGTGATGCAAAGAGGG
AATGATCATGTTTAAGTAGCTTTAATTATCTGATCAAGATATATGTGTGT
ATAAATTCTCTTGGTTGGTGGAGTTCTACATTTAATTAGTAGAACAAATA
AATTACATGTCAAATTTGTTAGGGTAGTTCATATCTTATTATCTGCTGTA
TGTAATTGTATTAAGGTCTCTTAGACAAAAATGACCTTCTTTCTAGTTCT
AGATATGTAAATATGTTTGTTGAATAAGATAAAGGGGCAAAAAAGTGTTC
CCATCCCATGTTCATATATTATATATCA
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Coding sequence (CDS) from alignment at chr5:45311353..45314180-

>rna-XM_027334214.1_CaCDCfrontier-NCBI_v1 ID=rna-XM_027334214.1_CaCDCfrontier-NCBI_v1; Name=rna-XM_027334214.1; organism=Cicer arietinum; type=CDS; length=729bp; location=Sequence derived from: chr5:45311353..45314180- (Cicer arietinum
ATGAGTGAGCTTGTTCATTTTTCTGCCATGTCAGAATATGATTTTGCTGC
TGAAGGAGATTTGTTCAAAGCACCCGAACCGATTATCGAAGAGCCAGATA
TTGACCTTGATCCCATGACAGCAGCCATCTCAATGATATCTTGTGGAGAG
GATGTAAAATCCACAGATATTTCTATTCTTCAAAACGAACAGCTTTTAAG
TGATGTATTCTATGAATGCAAAAAGGATCTCTTTGAAAAGGCAGCAATGG
AGTCTCCGCTCTCCGAGATTCTTGAAATCAAGGTTCCCCTATTAAACATT
GATGAGAACATAATTCAAGAAAACAAGCCATTTCCTGACATGCTGTTACC
AAAGAGCGTCAGCTCAGGAAGTTTAAGCTCGATGGATTGGATGCATGGAT
CTGCTATGAAGCCTGGTTTCCTTGGTATCCAAGGAGTAGATTTTGATGCA
GTATATGGAATGCGGAGATCATTTAGTGAAGGAGATATAAAGACTCTTGG
CAAAGGTAACATGAGCACGGTCCAATCTCCCGTTGAGAGGCCGTTTTTTA
GCAGCAACTGCAGCAGTGAGGAACGTCTACAAAAGCTCTCTAGATACAGG
AACAAGAAGACAAAGAGAAATTTTGGGAGGAAAATAAAGTATGCTTGCAG
GAAGGCTCTTGCTGACAGTCAACCAAGAATCCGTGGAAGATTTGCAAAGA
ATGAAGAATGTGATGCAAAGAGGGAATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR010402CCT_domain
IPR045281CONSTANS-like
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0009909regulation of flower development