Psat4g003160.1

Transcript Overview
NamePsat4g003160.1
Unique NamePsat4g003160.1_Ps_Cameor_v1a
TypemRNA
OrganismPisum sativum (pea)
Sequence length4158
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr4LG4supercontigchr4LG4:3737693..3741850 +Pisum sativum Cameor genome v1an/a
chr4LG4supercontigchr4LG4:3737693..3741850 +Pisum sativum Cameor genome v1an/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan: P. sativum Cameor genome v1a2019-09-12
BLAST: P. sativum Cameor genome v1a vs. Swissprot2019-09-12
Pisum sativum Cameor genome v1a2019-09-06
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
capsL042Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
capsL045Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caipsL746Cicer arietinum ICC 4958 genome v2Cicer arietinum
capsL617Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
capsL621Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
psvuR303Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
psvuR308Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
psvuR361Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pspvR354Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pspvR377Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccpsL068Cajanus cajan Asha genome v1.0Cajanus cajan
ccpsL069Cajanus cajan Asha genome v1.0Cajanus cajan
ccpsL371Cajanus cajan Asha genome v1.0Cajanus cajan
anpsL0206Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpsL0375Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpsL0378Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpsL0690Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
aspsL051Vigna angularis Jingnong 6 genome v1.1Vigna angularis
aspsL205Vigna angularis Jingnong 6 genome v1.1Vigna angularis
aspsL206Vigna angularis Jingnong 6 genome v1.1Vigna angularis
pszwsR306Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pstifR307Vicia faba cv. Tiffany genome v1.0Vicia faba
psvfhR271Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
psvfhR307Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
psvrvR260Vigna radiata cv. VC1973A genome v6.0Vigna radiata
psvrvR261Vigna radiata cv. VC1973A genome v6.0Vigna radiata
psvrvR298Vigna radiata cv. VC1973A genome v6.0Vigna radiata
psvrvR302Vigna radiata cv. VC1973A genome v6.0Vigna radiata
psvuaR289Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
psvssR359Vicia sativa cv. Studenica genome v1.0Vicia sativa
psvssR361Vicia sativa cv. Studenica genome v1.0Vicia sativa
psvuaR296Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
psvuaR315Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canpsL617Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canpsL622Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjpsL137Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpsL140Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpsL244Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carpsL619Cicer arietinum
carpsL629Cicer arietinum
ccapsL193Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapsL201Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapsL713Cajanus cajan cv. Asha genome v2.0Cajanus cajan
psvumR287Vigna umbellata FF25 genome v1.0Vigna umbellata
psvumR291Vigna umbellata FF25 genome v1.0Vigna umbellata
psvumR398Vigna umbellata FF25 genome v1.0Vigna umbellata
psvumR401Vigna umbellata FF25 genome v1.0Vigna umbellata
psvvaR323Vicia villosa cv. AU Merit genome v1.0Vicia villosa
psvvaR329Vicia villosa cv. AU Merit genome v1.0Vicia villosa
psvvaR390Vicia villosa cv. AU Merit genome v1.0Vicia villosa
psvasR279Vigna angularis cv. Shumari genome v1.a1Vigna angularis
psvasR284Vigna angularis cv. Shumari genome v1.a1Vigna angularis
psvstR288Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
psvasR360Vigna angularis cv. Shumari genome v1.a1Vigna angularis
psvasR363Vigna angularis cv. Shumari genome v1.a1Vigna angularis
psvstR377Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
psvstR380Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
psvunR282Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
pspvfR368Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pspvfR389Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
jg48570.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Psat4g003160Psat4g003160_Ps_Cameor_v1aPisum sativumgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Psat4g003160.1Psat4g003160.1_Ps_Cameor_v1a-proteinPisum sativumpolypeptide
Psat4g003160.1_Ps_Cameor_v1aPsat4g003160.1_Ps_Cameor_v1aPisum sativumpolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Psat4g003160.1.five_prime_utr1Psat4g003160.1.five_prime_utr1_Ps_Cameor_v1aPisum sativumfive_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Psat4g003160.1.exon1Psat4g003160.1.exon1_Ps_Cameor_v1aPisum sativumexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Psat4g003160.1.cds1Psat4g003160.1.cds1_Ps_Cameor_v1aPisum sativumCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Psat4g003160.1.three_prime_utr1Psat4g003160.1.three_prime_utr1_Ps_Cameor_v1aPisum sativumthree_prime_UTR


Homology
[Close]
BLAST of Psat4g003160.1 vs. DB:Swiss
Match: PHOX2_ARATH (Protein CLMP1 OS=Arabidopsis thaliana OX=3702 GN=CLMP1 PE=1 SV=1)

HSP 1 Score: 464.537 bits (1194), Expect = 7.131e-152
Identity = 241/315 (76.51%), Postives = 273/315 (86.67%), Query Frame = 1 
Query: 1318 DNECKEVEMDDWLFEFAQLFRSHVGIDPDAHIDLHELGMELCSEALEETVTSEEAQDLFDKAASKFQEVAALAFFNWGNVHMCAARKRIPLDETAGKEVVAEQLQVAYDWVKEKYSLAREKYEEALLIKPDFYEGLLALGQQQFEMAKLHWSFAIAKKIDLTSWDPTETLELFNSAEEKMKAATNMWEKLEEQRAKELKDPNATXXXXXXXXXXXHGSTTEGEASGVGGXXXXXXXXXXXXXVVMRSQIHLFWGNMLFEKSQVECKLGMDGWKKNLDAATERFKLAGASEADISMVLKNHSSNGDA--KGDDKKV 2256
            D E KE+EMDDWLF+FA LFR+HVGIDPDAHIDLHELGMELCSEALEETVTSE+AQ LFDKA++KFQEVAALAFFNWGNVHMCAARKRIPLDE+AGKEVVA QLQ AY+WVKE+Y+LA+EKYE+AL IKPDFYEGLLALGQQQFEMAKLHWS+ +A+KID++ WDP+ETL LF+SAE KMK AT MWEKLEEQR  +LK+PN+ KKEE+ +RRKK G     E S       I+AEEAAEQA  MRSQIHLFWGNMLFE+SQVECK+G DGW KNLD+A ERFKLAGASEADI+ V+KNH SN  A  +GD+KKV
Sbjct:  439 DPETKELEMDDWLFDFAHLFRTHVGIDPDAHIDLHELGMELCSEALEETVTSEKAQPLFDKASAKFQEVAALAFFNWGNVHMCAARKRIPLDESAGKEVVAAQLQTAYEWVKERYTLAKEKYEQALSIKPDFYEGLLALGQQQFEMAKLHWSYLLAQKIDISGWDPSETLNLFDSAEAKMKDATEMWEKLEEQRMDDLKNPNSNKKEEVSKRRKKQGGDGNEEVS-----ETITAEEAAEQATAMRSQIHLFWGNMLFERSQVECKIGKDGWNKNLDSAVERFKLAGASEADIATVVKNHCSNEAAATEGDEKKV 748

HSP 2 Score: 392.889 bits (1008), Expect = 2.881e-124
Identity = 227/347 (65.42%), Postives = 269/347 (77.52%), Query Frame = 1 
Query:   76 NGGVELDSSIFLKKAHEMKEEGNRRFQSKDYAGALEHYENALKLTPKIHPDRAVFHSNRAACLMQMKPIDYESVISECTLALQVQPXXXXXXXXXXXXXXXXGKYELAVQDVQLLLASDPNHKDALDISQRLRAAFGPRQEAQQDLHSRPSPAALGASAVRGAPIAGLGPCLPARPXXXXXXXXXXXXXXXP---NNKVDKSQNVLLTAENGSETTKRQQN-VALKPLSNGP-AVQPNSKNVNQKGINGQLSEVAIRWRPLKLVYDHDIRLAQMPVKCSFRVLRDVVSKRFPSSNSVLIKYKDCDGDLVTITSTDELRLAESFVDSYLLKEPESDKSDSISVLRLHI 1101
            NGGV+ D+SIFLK+AHE+KEEGN++FQ++DY GALE YEN +KL PK HPDRAVFHSNRAACLMQMKPIDYESVISEC++AL+ QP F RALLRRARAFEAVGK++LAVQDV +LL SDPNHKDA +IS+RL+ A GP     QDL SRPSPAALGASA  G PIAGLGPCLP+R   KKGV+S VG+V  P   N KV++ Q V    ENG   +K Q + V LKP+S+ P   +      +   + G++ E  IRWRPLK VYDHDIRL QMPV C F+ LR++VS RFPSS +VLIKYKD DGDLVTITST EL+LAES  D  L KEP++DKSDS+ +LRLH+
Sbjct:   37 NGGVDFDASIFLKRAHELKEEGNKKFQARDYVGALEQYENGIKLIPKSHPDRAVFHSNRAACLMQMKPIDYESVISECSMALKSQPGFTRALLRRARAFEAVGKFDLAVQDVNVLLGSDPNHKDAGEISKRLKTALGP----HQDLQSRPSPAALGASAALGGPIAGLGPCLPSRNVHKKGVTSPVGSVSLPNASNGKVERPQVVNPVTENGGSVSKGQASRVVLKPVSHSPKGSKVEELGSSSVAVVGKVQEKRIRWRPLKFVYDHDIRLGQMPVNCRFKELREIVSSRFPSSKAVLIKYKDNDGDLVTITSTAELKLAESAADCILTKEPDTDKSDSVGMLRLHV 379
[Close]
BLAST of Psat4g003160.1 vs. DB:Swiss
Match: PHOX4_ARATH (Protein PHOX4 OS=Arabidopsis thaliana OX=3702 GN=PHOX4 PE=2 SV=1)

HSP 1 Score: 318.931 bits (816), Expect = 6.821e-96
Identity = 193/477 (40.46%), Postives = 274/477 (57.44%), Query Frame = 1 
Query:  805 GQLSEVAIRWRPLKLVYDHDIRLAQMPVKCSFRVLRDVVSKRFPSSNSVLIKYKDCDGDLVTITSTDELRLAESFVDSYLLKEPESDKSDSISVLRLHIXXXXXXXXXXXXXXXXXXXXXXXXAKGDESGSHSSLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGATGDNECKEVEMDDWLFEFAQLFRSHVGIDPDAHIDLHELGMELCSEALEETVTSEEAQDLFDKAASKFQEVAALAFFNWGNVHMCAARKRIPLDETAGKEVVAEQLQVAYDWVKEKYSLAREKYEEALLIKPDFYEGLLALGQQQFEMAKLHWSFAIAKKIDLTSWDPTETLELFNSAEEKMKAATNMWEKLEEQRAKELKDPNATXXXXXXXXXXXHGSTTEGEASGVGGXXXXXXXXXXXXXVVMRSQIHLFWGNMLFEKSQVECKLGMDGWKKNLDAATERFKLAGASEADISMVLKNHSSNGDA 2235
            G   E A   R +KLV+  DIR AQ+P+  + R++RDV+  RFP+    LIKY+D +GDLVTIT+TDELRLA S               D +  LRL+I EV+P+QEP        +  +    +      + S+GE V                            G+   + C E    +W+F+FAQLF++HVG D D+++DLH+LGM+L +EA+E+ VT E+AQ+LF  AA KFQE+ ALA  NWGNVHM  ARK++ + E A +E + E ++ A+ W + +Y+ A EKYEEA+ +KPDFYE LLALGQ+QFE AKL W  A+  K+DL S    E L+L+N AE+ M+    +WE++EE R   +   +  K         +  S    E +              EQ   M SQI+L WG++L+E+S VE KLG+  W + L+ A E+F+LAGAS  DI++++KNH S+  A
Sbjct:  308 GSKKEGATVTRTIKLVHGDDIRWAQLPLDSTVRLVRDVIRDRFPALRGFLIKYRDTEGDLVTITTTDELRLAAS-------------THDKLGSLRLYIAEVNPDQEPTYDGMSNTESTDKVSKRLSSLADNGSVGEYV----------------------------GSDKASGCFE----NWIFQFAQLFKNHVGFDSDSYVDLHDLGMKLYTEAMEDAVTGEDAQELFQIAADKFQEMGALALLNWGNVHMSKARKQVCIPEDASREAIIEAVEAAFVWTQNEYNKAAEKYEEAIKVKPDFYEALLALGQEQFEHAKLCWYHALKSKVDLESEASQEVLKLYNKAEDSMERGMQIWEEMEECRLNGISKLDKHKNMLRKLELDELFSEASEEET-------------VEQTANMSSQINLLWGSLLYERSIVEYKLGLPTWDECLEVAVEKFELAGASATDIAVMVKNHCSSESA 726

HSP 2 Score: 90.8929 bits (224), Expect = 2.034e-17
Identity = 53/127 (41.73%), Postives = 84/127 (66.14%), Query Frame = 1 
Query:   94 DSSIFLKKAHEMKEEGNRRFQSKDYAGALEHYENALKLTPKIHPDRAVFHSNRAACLMQMKPIDYESVISECTLALQVQPXXXXXXXXXXXXXXXXGKYELAVQDVQLLLASDPNHKDALDISQRLR 474
            D  IF+ +A E+KEEGN+ FQ +D+ GA+  ++ ALKL PK H D A   ++ A+C MQM   +Y + ISEC LAL+  P + +AL+RR+R +EA+ K + A +D +++L  +P +  A +I  R++
Sbjct:   43 DMEIFISRALELKEEGNKLFQKRDHEGAMLSFDKALKLLPKDHIDVAYLRTSMASCYMQMGLGEYPNAISECNLALEASPRYSKALVRRSRCYEALNKLDYAFRDARIVLNMEPGNVSANEIFDRVK 169
[Close]
BLAST of Psat4g003160.1 vs. DB:Swiss
Match: PHOX1_ARATH (Protein PHOX1 OS=Arabidopsis thaliana OX=3702 GN=PHOX1 PE=1 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 3.596e-77
Identity = 139/313 (44.41%), Postives = 203/313 (64.86%), Query Frame = 1 
Query: 1306 GATGD---NECKEVEMDDWLFEFAQLFRSHVGIDPDAHIDLHELGMELCSEALEETVTSEEAQDLFDKAASKFQEVAALAFFNWGNVHMCAARKRIPLDETAGKEVVAEQLQVAYDWVKEKYSLAREKYEEALLIKPDFYEGLLALGQQQFEMAKLHWSFAIAKKIDLTSWDPTETLELFNSAEEKMKAATNMWEKLEEQRAKELKDPNATXXXXXXXXXXXHGSTTEGEASGVGGXXXXXXXXXXXXXVVMRSQIHLFWGNMLFEKSQVECKLGMDGWKKNLDAATERFKLAGASEADISMVLKNHSSNGDA 2235
            G+ GD   +E     ++ W+F+FAQLF++HVG D D++++LH LGM+L +EA+E+ VT E+AQ+LFD AA KFQE+AALA FNWGNVHM  AR++I   E   +E + E+++  ++W K +Y+ A EKYE A+ IK DFYE LLALGQQQFE AKL W  A++ ++D+ S    + L+L+N AEE M+    +WE++EE+R   + + +  K+           S    E S              EQ   M SQI+L WG++L+E+S VE KLG+  W + L+ A E+F+LAGAS  DI++++KNH S+ +A
Sbjct:  390 GSVGDFVESEKASTSLEHWIFQFAQLFKNHVGFDSDSYLELHNLGMKLYTEAMEDIVTGEDAQELFDIAADKFQEMAALAMFNWGNVHMSKARRQIYFPEDGSRETILEKVEAGFEWAKNEYNKAAEKYEGAVKIKSDFYEALLALGQQQFEQAKLCWYHALSGEVDIESDASQDVLKLYNKAEESMEKGMQIWEEMEERRLNGISNFDKHKELLQKLGLDGIFSEASDEESA-------------EQTANMSSQINLLWGSLLYERSIVEYKLGLPTWDECLEVAVEKFELAGASATDIAVMVKNHCSSDNA 689

HSP 2 Score: 152.525 bits (384), Expect = 4.733e-37
Identity = 110/317 (34.70%), Postives = 178/317 (56.15%), Query Frame = 1 
Query:   94 DSSIFLKKAHEMKEEGNRRFQSKDYAGALEHYENALKLTPKIHPDRAVFHSNRAACLMQMKPIDYESVISECTLALQVQPXXXXXXXXXXXXXXXXGKYELAVQDVQLLLASDPNHKDALDISQRLRAAF-GPRQEAQQDLHSRPSPAALGASAVRGAPIAGLGPCLPARPXXXXXXXXXXXXXXXPNNKVDKSQNVLL---TAENGSETTKRQQNVAL--KPLSNGPAVQPNSKNVNQKGINGQLSEVAIRWRPLKLVYDHDIRLAQMPVKCSFRVLRDVVSKRFPSSNSVLIKYKDCDGDLVTITSTDELRLAES 1026
            D +IF+ +A E+KEEGN+ FQ +DY GA+  Y+ A+KL P+ H D A   ++ A+C MQM   +Y + I+EC LAL+  P F +ALL+RAR +EA+ K + A +D +++L  +P +  A +I +R++    G   +  +   +  +   +GA+ +R             +   +K    ++      N+   KS   ++     +NG E    ++  A+  K L +  AV      ++++ I  ++ E A   R +KLV+  DIR AQ+P+  S  ++RDV+  RFP+    LIKY+D +GDLVTIT+TDELRLA S
Sbjct:   44 DMTIFINRALELKEEGNKLFQKRDYEGAMFRYDKAVKLLPRDHGDVAYLRTSMASCYMQMGLGEYPNAINECNLALEASPRFSKALLKRARCYEALNKLDFAFRDSRVVLNMEPENVSANEIFERVKKVLVGKGIDVDEMEKNLVNVQPVGAARLRKI----------VKERLRKKKKKSMTMTNGGNDGERKSVEAVVEDAKVDNGEEVDSGRKGKAIEEKKLEDKVAV------MDKEVIASEIKEDATVTRTVKLVHGDDIRWAQLPLDSSVVLVRDVIKDRFPALKGFLIKYRDSEGDLVTITTTDELRLAAS 344
[Close]
BLAST of Psat4g003160.1 vs. DB:Swiss
Match: HIP_MAIZE (HSP-interacting protein OS=Zea mays OX=4577 GN=HIP PE=1 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 3.136e-72
Identity = 129/294 (43.88%), Postives = 189/294 (64.29%), Query Frame = 1 
Query: 1345 DDWLFEFAQLFRSHVGIDPDAHIDLHELGMELCSEALEETVTSEEAQDLFDKAASKFQEVAALAFFNWGNVHMCAARKRIPLDETAGKEVVAEQLQVAYDWVKEKYSLAREKYEEALLIKPDFYEGLLALGQQQFEMAKLHWSFAIAKKIDLTSWDPTETLELFNSAEEKMKAATNMWEKLEEQRAKELKDPNATXXXXXXXXXXXHGSTTEGEASGVGGXXXXXXXXXXXXXVVMRSQIHLFWGNMLFEKSQVECKLGMDGWKKNLDAATERFKLAGASEADISMVLKNHSSN 2226
            DDW+ +FAQ+F++HVG   DA++DLH+LG+ L  EA+E+T+  EEAQ++F+ A SKF+E+AALA FN GNVHM  AR+R  L E   +E + E++ V+YDW   +Y+ A   +EEA+  K DF+EGL+ALGQQ+FE AKL W +A+A KI++     TE LELFN AE+ M+   +MWE++E  R K L  P+  K               EG    +          +      +RS I++ WG +L+E+S VE  LG+  W+++L  A E+FK+ GAS+ADI++++KNH +N
Sbjct:  408 DDWMVQFAQIFKNHVGFSSDAYLDLHDLGLRLHYEAMEDTIQREEAQEIFEVAESKFKEMAALALFNCGNVHMSRARRRPCLAEDPLQEFILEKVNVSYDWACTEYAKAGAMFEEAVKTKSDFFEGLIALGQQKFEQAKLSWYYALACKINME----TEVLELFNHAEDNMEKGMDMWERMETLRLKGLSKPSKEKVVLEKM-------VLEGFVKDISADEAFEQASS------IRSHINILWGTILYERSVVEFNLGLPSWEESLTVAMEKFKIGGASQADINVIVKNHCAN 684

HSP 2 Score: 122.865 bits (307), Expect = 1.614e-27
Identity = 112/339 (33.04%), Postives = 164/339 (48.38%), Query Frame = 1 
Query:   94 DSSIFLKKAHEMKEEGNRRFQSKDYAGALEHYENALKLTPK-IHPDRAVFHSNRAACLMQMKPIDYESVISECTLALQVQPXXXXXXXXXXXXXXXXGKYELAVQDVQLLLASDPNHKDALDISQRLRAAFGPRQ---------EAQQDLHSRPSPAALGASAVRGAPIA-------GLGPCLPARPXXXXXXXXXXXXXXXPNNKVDKSQNVLLTAENGSET------TKRQQNVALKPLSNGPAVQPNSKNVNQKGIN-GQLSEVAIRWRPLKLVYDHDIRLAQMPVKCSFRVLRDVVSKRFPSSNSVLIKYKDCDGDLVTITSTDELRLAESFVDS 1038
            D ++FL+ + E+KEEG R F  +D+ GA   Y+ A++L P     + A   ++ A C M+M P ++   I EC LAL+  P + RALLRRA  FEA+G+ +LA  D++ +L  +P ++ A  IS R+R A   +          E + ++ S        +   R   +A       G+     A    + G     G     ++  D   N L   E  +ET       KR  + A K    G + Q     VN    N G   EV    + +KLV+  DIR AQMP  CS   LR++V  +FPS  + LIKYKD + DLVTIT ++EL  A +   S
Sbjct:   18 DDAVFLELSRELKEEGTRLFNRRDFEGAAFKYDKAVQLLPAGRRVEAAHLRASIAHCYMRMSPAEFHHAIHECNLALEAVPRYSRALLRRAACFEALGRPDLAWGDIRTVLRWEPGNRAARQISDRVRTALEDKGISVALDVLPEDENEIASAKGEERKKSRNKRFDSVAGGREGENGIALLESASTEKQAGPRQTNGTGNHQDHTEDSESNGLEKLEQSTETGEKDMGKKRGAHAAGKKPRCGESKQQKHSAVNHCQDNIGAKEEVM---KDVKLVFGEDIRCAQMPANCSLPQLREIVQNKFPSLKAFLIKYKDKEEDLVTITLSEELSWASNLAVS 353
[Close]
BLAST of Psat4g003160.1 vs. DB:Swiss
Match: PHOX3_ARATH (Protein PHOX3 OS=Arabidopsis thaliana OX=3702 GN=PHOX3 PE=1 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.156e-53
Identity = 117/312 (37.50%), Postives = 180/312 (57.69%), Query Frame = 1 
Query: 1309 ATGDNECKEVEMDDWLFEFAQLFRSHVGIDPDAHIDLHELGMELCSEALEETVTSEEAQDLFDKAASKFQEVAALAFFNWGNVHMCAARKRIPLDETAGKEVVAEQLQVAYDWVKEKYSLAREKYEEALLIKPDFYEGLLALGQQQFEMAKLHWSFAIAKKIDLTSWDPTETLELFNSAEEKMKAATNMWEKLEEQRAKELKDPNATXXXXXXXXXXXHGSTTEGEASGVGGXXXXXXXXXXXXXVVMRSQIHLFWGNMLFEKSQVECKLGMDGWKKNLDAATERFKLAGASEADISMVLKNHSSNGDAKGD 2244
              G   CK   ++DW+ EFA LF+    ID D  ++L ELGM+L SEA+EE VTS+ AQ  FD+AA +FQEVAA +  N G VHM  ARKR+ L +    E V+EQ++ AY+  K++++ A+EKYEEA+ IKP+ +E  LALG QQFE A+L W + +   +DL +W   + ++ + SAE  +K +  + E LE  +  E   P+   K + L   K  GS+T+   +   G+              ++S I +    +L+E+S +E KL    W+++L+AA E+F+LAG  + D+  ++      G+   D
Sbjct:  466 VNGRGGCK---VEDWMIEFAHLFKIQARIDSDRCLNLQELGMKLNSEAMEEVVTSDAAQGPFDRAAQQFQEVAARSLLNLGYVHMSGARKRLSLLQGVSGESVSEQVKTAYECAKKEHANAKEKYEEAMKIKPECFEVFLALGLQQFEEARLSWYYVLVSHLDLKTWPYADVVQFYQSAESNIKKSMEVLENLETGKESE---PSQAGKTDCLTHEKDLGSSTQNNPAKEAGR--------------LKSWIDILLCAVLYERSIMEYKLDQPFWRESLEAAMEKFELAGTCKDDVVEIISEDYVAGNTLRD 757

HSP 2 Score: 135.576 bits (340), Expect = 2.048e-31
Identity = 105/308 (34.09%), Postives = 161/308 (52.27%), Query Frame = 1 
Query:  109 LKKAHEMKEEGNRRFQSKDYAGALEHYENALKLTPKIHPDRAVFHSNRAACLMQMKPIDYESVISECTLALQVQPXXXXXXXXXXXXXXXXGKYELAVQDVQLLLASDPNHKDALDISQRLRAAFGPRQ-EAQQDLHSRPSPAALGASAVRGAPIAGLGPCLPARPXXXXXXXXXXXXXXXPNNKVDKSQNVLLTAENGSETTKRQQNVALKPLSNGPAVQPNSKNVNQKGINGQLSEVAIR--WRPLKLVYDHDIRLAQMPVKCSFRVLRDVVSKRFPSSNSVLIKYKDCDGDLVTITSTDELRLAE 1023
            + KA  +KEEGN+ FQ +DY GA+  Y  A+K+ PK H + +   +N A+C MQ++P ++   I EC LAL V P   +ALL+RAR +EA+ K +LA++DV ++   DP +  A +I ++L+     +       +   P        A   A  A LG  +  +   K             + + +K  NVL  AE G E  K +                 SK   +  I  +L  + +    + +K VY  DIRLA++P+ C+   LR+VV +RFPS  +V IKY+D +GDLVTIT+ +ELR++E
Sbjct:  123 VSKAQGLKEEGNKLFQKRDYDGAMFKYGEAIKILPKDHVEVSHVRANVASCYMQLEPGEFAKAIHECDLALSVTPDHNKALLKRARCYEALNKLDLALRDVCMVSKLDPKNPMASEIVEKLKRTLESKGLRINNSVIELPPDYVEPVGASPAALWAKLGK-VRVKKTKKSNQVEEKSEGEGEDVEPEKKNNVL--AEKGKEKIKMKVKG-----KQSDKRSDTSKEQEKVIIEEELLVIGVEDVNKDVKFVYSDDIRLAELPINCTLFKLREVVHERFPSLRAVHIKYRDQEGDLVTITTDEELRMSE 422
[Close]
BLAST of Psat4g003160.1 vs. DB:Swiss
Match: TTC1_MOUSE (Tetratricopeptide repeat protein 1 OS=Mus musculus OX=10090 GN=Ttc1 PE=1 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 2.856e-9
Identity = 48/125 (38.40%), Postives = 71/125 (56.80%), Query Frame = 1 
Query:  127 MKEEGNRRFQSKDYAGALEHYENALKLTPK-IHPDRAVFHSNRAACLMQMKPIDYESVISECTLALQVQPXXXXXXXXXXXXXXXXGKYELAVQDVQLLLASDPNHKDALDISQRLRAAFGPRQE 498
            +KEEGN RF+  DY  A   Y  AL++ P     DR+V  SNRAA   +MK    E+ I++C+ A+Q+ P ++RA+LRRA  +E   K + A++D + +L  DP+   A +   RL      R E
Sbjct:  119 LKEEGNERFKRGDYMEAESSYSQALQMCPACFQKDRSVLFSNRAA--ARMKQDKKETAITDCSKAIQLNPTYIRAILRRAELYEKTDKLDEALEDYKSVLEKDPSVHQAREACMRLPKQIEERNE 241
[Close]
BLAST of Psat4g003160.1 vs. DB:Swiss
Match: TTC1_BOVIN (Tetratricopeptide repeat protein 1 OS=Bos taurus OX=9913 GN=TTC1 PE=2 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 3.688e-8
Identity = 48/125 (38.40%), Postives = 69/125 (55.20%), Query Frame = 1 
Query:  127 MKEEGNRRFQSKDYAGALEHYENALKLTPK-IHPDRAVFHSNRAACLMQMKPIDYESVISECTLALQVQPXXXXXXXXXXXXXXXXGKYELAVQDVQLLLASDPNHKDALDISQRLRAAFGPRQE 498
            +KEEGN +F+  DY  A   Y  AL+  P     DR+V  SNRAA   +MK    E  IS+C+ A+Q+ P ++RA+LRRA  +E   K + A++D + +L  DP+   A +   RL      R E
Sbjct:  119 LKEEGNEQFKKGDYIEAESSYTRALQTCPSCFQKDRSVLFSNRAAA--RMKQEKKEMAISDCSKAIQLNPSYIRAILRRAELYEKTDKLDEALEDYKSILEKDPSVHQAREACMRLPKQIEERNE 241
[Close]
BLAST of Psat4g003160.1 vs. DB:Swiss
Match: UN45B_XENLA (Protein unc-45 homolog B OS=Xenopus laevis OX=8355 GN=unc45b PE=2 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 1.217e-7
Identity = 45/133 (33.83%), Postives = 73/133 (54.89%), Query Frame = 1 
Query:  124 EMKEEGNRRFQSKDYAGALEHYENALKLTPKIHPDRAVFHSNRAACLMQMKPIDYESVISECTLALQVQPXXXXXXXXXXXXXXXXGKYELAVQDVQLLLASDPNHKDALDISQRLRAAFGPRQEAQQDLHSR 522
            ++KEEGN+ FQS DY  A+E Y  ALKL       +AV + NR+AC ++ +  +Y    ++ + A+ V    ++AL RR +A E +GK + A +DVQ     +P ++  L++  RL +    +   Q    SR
Sbjct:    6 QLKEEGNKYFQSNDYGNAIECYSKALKLITD-KKMKAVLYRNRSACYLKQE--NYIQAAADASKAIDVDASDIKALFRRCQALEKLGKLDQAYKDVQRCATLEPKNRTFLEMLHRLGSNIQEKLHVQFSTDSR 135
[Close]
BLAST of Psat4g003160.1 vs. DB:Swiss
Match: STIP1_BOVIN (Stress-induced-phosphoprotein 1 OS=Bos taurus OX=9913 GN=STIP1 PE=2 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 1.429e-7
Identity = 47/135 (34.81%), Postives = 73/135 (54.07%), Query Frame = 1 
Query:  118 AHEMKEEGNRRFQSKDYAGALEHYENALKLTPKIHPDRAVFHSNRAACLMQMKPIDYESVISECTLALQVQPXXXXXXXXXXXXXXXXGKYELAVQDVQLLLASDPNHKDALDISQRLRAAFGPRQEAQQDLHSR 522
            A E K +GN  FQ  DY  A++HY  A+K  PK     A  +SNRAAC  ++  ++++  + +C   +Q++P F++   R+A A EA+  Y  A+   Q  L  D N K+A D  QR   A   R ++ +D+  R
Sbjct:  360 ALEEKNKGNECFQKGDYPQAMKHYTEAIKRNPK----DAKLYSNRAACYTKL--LEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSNCKEAADGYQRCVMAQYNRHDSPEDVKRR 488
[Close]
BLAST of Psat4g003160.1 vs. DB:Swiss
Match: TTC1_HUMAN (Tetratricopeptide repeat protein 1 OS=Homo sapiens OX=9606 GN=TTC1 PE=1 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 1.602e-7
Identity = 45/125 (36.00%), Postives = 70/125 (56.00%), Query Frame = 1 
Query:  127 MKEEGNRRFQSKDYAGALEHYENALKLTPK-IHPDRAVFHSNRAACLMQMKPIDYESVISECTLALQVQPXXXXXXXXXXXXXXXXGKYELAVQDVQLLLASDPNHKDALDISQRLRAAFGPRQE 498
            +KEEGN +F+  DY  A   Y  AL++ P     +R++  SNRAA   +MK    E  I++C+ A+Q+ P ++RA+LRRA  +E   K + A++D + +L  DP+   A +   RL      R E
Sbjct:  119 LKEEGNEQFKKGDYIEAESSYSRALEMCPSCFQKERSILFSNRAA--ARMKQDKKEMAINDCSKAIQLNPSYIRAILRRAELYEKTDKLDEALEDYKSILEKDPSIHQAREACMRLPKQIEERNE 241
The following BLAST results are available for this feature:
BLAST of Psat4g003160.1 vs. DB:Swiss
Analysis Date: 2019-09-12 (BLAST: P. sativum Cameor genome v1a vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
PHOX2_ARATH7.131e-15276.51Protein CLMP1 OS=Arabidopsis thaliana OX=3702 GN=C... [more]
PHOX4_ARATH6.821e-9640.46Protein PHOX4 OS=Arabidopsis thaliana OX=3702 GN=P... [more]
PHOX1_ARATH3.596e-7744.41Protein PHOX1 OS=Arabidopsis thaliana OX=3702 GN=P... [more]
HIP_MAIZE3.136e-7243.88HSP-interacting protein OS=Zea mays OX=4577 GN=HIP... [more]
PHOX3_ARATH2.156e-5337.50Protein PHOX3 OS=Arabidopsis thaliana OX=3702 GN=P... [more]
TTC1_MOUSE2.856e-938.40Tetratricopeptide repeat protein 1 OS=Mus musculus... [more]
TTC1_BOVIN3.688e-838.40Tetratricopeptide repeat protein 1 OS=Bos taurus O... [more]
UN45B_XENLA1.217e-733.83Protein unc-45 homolog B OS=Xenopus laevis OX=8355... [more]
STIP1_BOVIN1.429e-734.81Stress-induced-phosphoprotein 1 OS=Bos taurus OX=9... [more]
TTC1_HUMAN1.602e-736.00Tetratricopeptide repeat protein 1 OS=Homo sapiens... [more]
back to top
InterPro
Analysis Name: InterProScan: P. sativum Cameor genome v1a
Date Performed: 2019-09-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 612..632
NoneNo IPR availableGENE3D3.10.20.90coord: 280..349
e-value: 9.6E-9
score: 36.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 386..410
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 632..659
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 756..771
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 738..771
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 632..672
NoneNo IPR availableCDDcd05992PB1coord: 281..367
e-value: 3.98682E-10
score: 54.5913
NoneNo IPR availableSUPERFAMILY54277CAD & PB1 domainscoord: 276..342
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 114..147
e-value: 0.097
score: 21.8
coord: 40..73
e-value: 19.0
score: 12.5
coord: 78..113
e-value: 220.0
score: 3.1
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 40..73
score: 8.939
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 114..147
score: 7.818
IPR000270PB1 domainSMARTSM00666PB1_newcoord: 278..370
e-value: 6.1E-18
score: 75.6
IPR000270PB1 domainPFAMPF00564PB1coord: 278..369
e-value: 3.0E-19
score: 68.7
IPR000270PB1 domainPROSITEPS51745PB1coord: 278..370
score: 14.35
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 36..161
e-value: 1.5E-32
score: 114.3
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 37..171
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 492..588
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 40..147
score: 14.718

Sequences
The following sequences are available for this feature:

mRNA sequence

>Psat4g003160.1_Ps_Cameor_v1a ID=Psat4g003160.1_Ps_Cameor_v1a; Name=Psat4g003160.1; organism=Pisum sativum; type=mRNA; length=4158bp
AGAAAATAAAATAATTCCATCTATAAAATTCTTCATGTGACATTCTACAA
AAATAAATAATTAATGTATGAGTTTTCTACTATAAAAAAAAAGAAAAAGG
AAAAGATAAAAAGTATGTCAAAGTGATTTGAAAAAGTAGAGTTCATTCGG
TTAGATTAACACCGAGTTTCGATAATTCTTCAGATCGGATGGTCGAGAAT
CAATGAATGTGTGATGGACCCACCACATCTAAGAACTATATGAAACTGAC
CCAAATTTTTAGGGTTTCACTTCCAAAGACAGTTCCCAAAACCCATCAAC
CACTATCACTACTCATATCTCTCCACTATTAATCTAACACCAACACCATT
TTCATTTCACTCTCTCGCTTCTTCTAGATTCTTTCATCTCACACCTATTC
AACTTCTCACCGGTAAGTACAGTTTCCTTAAACCCTCCTCGTACCTAGGT
TTCATCGAAACAAAATTCAATTTTTAATATTAATTTTGATTTAGGCTTAG
GTTTAGATTTTGATATAATTTACTGCGTGTGAAAACTGAGAGAGGGAAAA
AAGTATGGGGAAATCTGGGGGTAGAAGGAAGAAGGGTGGTGCGGTTGTTG
TTGACAATTCAGTTTCTGCACAAACTCCGAATGGTGGTGTTGAGTTGGAT
TCATCAATTTTTTTGAAAAAGGCACATGAAATGAAGGAAGAAGGGAATAG
GAGATTTCAGAGTAAGGATTATGCTGGTGCTCTTGAACACTATGAGAATG
CTCTTAAACTCACACCCAAAATTCATCCTGACAGAGCTGTTTTTCACAGC
AATAGGGCTGCTTGTTTGATGCAAATGAAACCTATTGATTATGAATCTGT
TATTTCTGAGTGTACTTTGGCTCTTCAGGTTCAGCCTTTGTTTGTTCGGG
CTCTTCTCCGTAGGGCTCGGGCGTTTGAGGCTGTTGGTAAGTATGAATTG
GCTGTGCAGGATGTGCAGTTGTTGTTGGCTTCTGATCCTAATCATAAGGA
TGCTTTGGATATTTCTCAGAGATTGAGGGCTGCGTTTGGGCCTCGTCAGG
AGGCCCAGCAGGATCTTCATAGTCGGCCTTCTCCTGCTGCTCTTGGGGCA
TCGGCTGTCCGTGGTGCCCCTATTGCGGGGTTAGGTCCATGTTTGCCTGC
ACGGCCTGGATCGAAGAAGGGGGTGAGTTCTGCAGTTGGGGCTGTTGTTT
CTCCGAATAACAAGGTTGACAAGTCTCAAAATGTTTTACTTACTGCTGAA
AATGGCTCGGAGACGACTAAGCGTCAGCAGAATGTTGCGTTGAAGCCTTT
AAGTAATGGTCCTGCAGTGCAACCTAACTCGAAAAATGTGAACCAGAAGG
GGATTAATGGGCAGCTGTCGGAGGTTGCGATTCGGTGGAGACCATTGAAG
CTTGTTTATGATCATGACATCAGGCTTGCTCAGATGCCGGTGAAATGTAG
TTTCAGAGTACTGAGAGATGTGGTAAGCAAAAGATTTCCTTCTTCGAATT
CAGTTCTGATCAAGTACAAGGATTGTGATGGTGATTTGGTTACTATAACG
TCTACGGATGAACTCAGATTGGCAGAGTCTTTTGTTGATAGCTATTTGCT
GAAAGAGCCTGAATCAGATAAAAGTGATTCCATTTCGGTGCTGAGACTTC
ATATTGTTGAAGTTAGTCCGGAACAGGAGCCACCTTTGTTGGAAGAAGAG
GAAGAAAAACTTGTTGAGAATGAAGTGGCCAAGGGAGATGAGAGTGGATC
TCATTCTTCCCTTGGTGAATCTGTCCCTGAAGTTACGGAAGTTACCGAGG
TTCCTGATATTGAGGTTGACAAGGTAGCTGCTAAGAAGGATGCTTCCAAG
GAAAAGCCGGGAGCCACCGGAGATAATGAATGCAAAGAAGTGGAGATGGA
TGATTGGTTGTTCGAATTTGCTCAGCTTTTCCGCTCACATGTTGGTATTG
ACCCGGATGCTCATATTGACTTGCACGAACTTGGGATGGAGCTTTGTTCT
GAGGCACTTGAAGAAACAGTAACTAGTGAGGAAGCTCAAGATTTATTCGA
CAAGGCTGCTTCAAAATTCCAGGAGGTGGCAGCATTGGCATTCTTCAACT
GGGGTAATGTTCACATGTGCGCGGCTAGAAAGCGGATTCCCTTAGATGAA
ACTGCTGGAAAAGAGGTAGTGGCAGAACAACTTCAAGTGGCTTATGACTG
GGTCAAGGAAAAGTATTCTTTGGCAAGAGAAAAATATGAGGAAGCACTCT
TGATCAAACCAGATTTCTACGAGGGGCTGTTGGCTCTAGGCCAGCAACAA
TTTGAAATGGCCAAACTCCATTGGTCTTTTGCAATTGCTAAGAAGATAGA
TTTAACAAGCTGGGATCCAACGGAAACTCTTGAATTGTTTAATAGTGCGG
AGGAGAAGATGAAAGCCGCAACAAATATGTGGGAGAAGTTGGAGGAACAG
AGAGCAAAGGAGCTAAAAGACCCAAATGCAACTAAGAAAGAAGAATTATT
GAGAAGAAGGAAGAAACATGGCAGTACTACCGAAGGCGAGGCTTCTGGTG
TTGGCGGTCAGAGTGAGATATCTGCCGAAGAAGCCGCTGAGCAAGCAGTG
GTCATGAGATCACAGATTCATCTCTTTTGGGGAAATATGCTTTTCGAAAA
ATCCCAAGTTGAATGCAAATTAGGAATGGATGGTTGGAAGAAAAACCTAG
ATGCTGCAACAGAAAGGTTCAAGCTTGCAGGAGCTTCTGAGGCAGATATT
TCAATGGTTCTAAAGAATCATTCTTCTAATGGTGATGCAAAAGGTGATGA
TAAAAAGGTTCAGAGTACACTGCCCAACAAGACGGGTGAACTAGAGATCA
ATAAGGCAAATCAAGAATGAGATAAATGATGTGTGGCTATGAAATCTTAT
TCGTTTTTGTTCAGTCACTTCTTCAATGAAAGATTATGGACAAAGAATAT
CCTTGGCATCAAGAGCTCAAAAGTAATGTCTGAATTTTTCGGAAATTGAA
ATTGAAAATTTAGGGTACTTCAATTAGATAGTTCTCTGCCCTTTTTTCTC
TGAAGTTCTTGGAATCTGATGAAGGGGAGATTGTTTTTTAACATTATTTA
CGCAGGTATGAATTTCTGATGATCAATTTTTGTTGCTCAGTCATTTTTGT
CCCCTGTTTTATCCTTTGTACTGTTGCAATTTATTGGATTGTATACCTGT
TCAACTCTTGACATTTTATTTGCCTTGTTGGGTCTTTACCAGTGTGCTAC
ATGTATTGCTGATTTTATTTTATAAGTTACTATAACCCAAGTTTTATATG
GTTAAGTTATGAGTTGTCGAATGTGTTTCTTTCATAAACACTGGTTAGTG
TTTGAAGGGTCTGTTAAAAATTGGAAAAAAAATATACTCTCCAAATCCAA
AGTAAAGAAAAATCTGTGGATCCTCTGCACTGATGAATGGTTTCTATCAT
TGAGTGCACAGGACAAGTTTCTTGTCTGTGTGATTTTATTATTATTGTGT
GGTGATATGGACTTAGATAGGTCAGTGTGAATGTTTCCCACGTTTCAGCC
TAAATTACGTACCATGTTGTTCTACTTTGCTGAAAGTACTCCACTAGATA
ACGATAACACAATTGTTTGATTTTAAAATAGAGAATTCTTAATTACCCCT
CAACAAGTAAAGTTACCGGAGGATTTAATAAACGATTAAATACAATAAAA
TGAAGTCGTATTAATGGATTGGTCTACTGCACTCATTCTTTTTAATCTCG
CGCTCAACTCTACATATTCTCCTCTATTTCTCTTCTCTCTATCCGCACTC
ATTTTCTATGGGTTTGAATTGATTTATTTGAGTTTGTGTCTTTGAGATAA
ATTTTGTGACAATGTTTAAGAGACTTTATATAAATTAGACATTTTTTATA
AGATTTTTTAGAAGGATTACTTTAAGATATACCTCAAGGAGATAAGCTCT
TTCTAGAAGGAGATTTAAATGAATATATATAAATGAATATATAGGGAGTG
TAGCAAGAGGTTTTGAAGGCGTGCAGGTGGGATATGGTCTCGGGGAGGTA
AATGCGGAAGATAAATTCAATTTGGAGTTTTCTTCGGATTTTGATCTTAT
TATAATTAATATTTGATTTGAAAAAGAGATGGACATCTTATTACATATAA
GAGTGAGG
back to top

protein sequence of Psat4g003160.1_Ps_Cameor_v1a

>Psat4g003160.1_Ps_Cameor_v1a ID=Psat4g003160.1_Ps_Cameor_v1a; Name=Psat4g003160.1_Ps_Cameor_v1a; organism=Pisum sativum; type=polypeptide; length=772bp
MGKSGGRRKKGGAVVVDNSVSAQTPNGGVELDSSIFLKKAHEMKEEGNRR
FQSKDYAGALEHYENALKLTPKIHPDRAVFHSNRAACLMQMKPIDYESVI
SECTLALQVQPLFVRALLRRARAFEAVGKYELAVQDVQLLLASDPNHKDA
LDISQRLRAAFGPRQEAQQDLHSRPSPAALGASAVRGAPIAGLGPCLPAR
PGSKKGVSSAVGAVVSPNNKVDKSQNVLLTAENGSETTKRQQNVALKPLS
NGPAVQPNSKNVNQKGINGQLSEVAIRWRPLKLVYDHDIRLAQMPVKCSF
RVLRDVVSKRFPSSNSVLIKYKDCDGDLVTITSTDELRLAESFVDSYLLK
EPESDKSDSISVLRLHIVEVSPEQEPPLLEEEEEKLVENEVAKGDESGSH
SSLGESVPEVTEVTEVPDIEVDKVAAKKDASKEKPGATGDNECKEVEMDD
WLFEFAQLFRSHVGIDPDAHIDLHELGMELCSEALEETVTSEEAQDLFDK
AASKFQEVAALAFFNWGNVHMCAARKRIPLDETAGKEVVAEQLQVAYDWV
KEKYSLAREKYEEALLIKPDFYEGLLALGQQQFEMAKLHWSFAIAKKIDL
TSWDPTETLELFNSAEEKMKAATNMWEKLEEQRAKELKDPNATKKEELLR
RRKKHGSTTEGEASGVGGQSEISAEEAAEQAVVMRSQIHLFWGNMLFEKS
QVECKLGMDGWKKNLDAATERFKLAGASEADISMVLKNHSSNGDAKGDDK
KVQSTLPNKTGELEINKANQE*
back to top

mRNA from alignment at chr4LG4:3737693..3741850+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Psat4g003160.1_Ps_Cameor_v1a ID=Psat4g003160.1_Ps_Cameor_v1a; Name=Psat4g003160.1; organism=Pisum sativum; type=mRNA; length=4158bp; location=Sequence derived from: chr4LG4:3737693..3741850+ (Pisum sativum
AGAAAATAAAATAATTCCATCTATAAAATTCTTCATGTGACATTCTACAA
AAATAAATAATTAATGTATGAGTTTTCTACTATAAAAAAAAAGAAAAAGG
AAAAGATAAAAAGTATGTCAAAGTGATTTGAAAAAGTAGAGTTCATTCGG
TTAGATTAACACCGAGTTTCGATAATTCTTCAGATCGGATGGTCGAGAAT
CAATGAATGTGTGATGGACCCACCACATCTAAGAACTATATGAAACTGAC
CCAAATTTTTAGGGTTTCACTTCCAAAGACAGTTCCCAAAACCCATCAAC
CACTATCACTACTCATATCTCTCCACTATTAATCTAACACCAACACCATT
TTCATTTCACTCTCTCGCTTCTTCTAGATTCTTTCATCTCACACCTATTC
AACTTCTCACCGGTAAGTACAGTTTCCTTAAACCCTCCTCGTACCTAGGT
TTCATCGAAACAAAATTCAATTTTTAATATTAATTTTGATTTAGGCTTAG
GTTTAGATTTTGATATAATTTACTGCGTGTGAAAACTGAGAGAGGGAAAA
AAGTATGGGGAAATCTGGGGGTAGAAGGAAGAAGGGTGGTGCGGTTGTTG
TTGACAATTCAGTTTCTGCACAAACTCCGAATGGTGGTGTTGAGTTGGAT
TCATCAATTTTTTTGAAAAAGGCACATGAAATGAAGGAAGAAGGGAATAG
GAGATTTCAGAGTAAGGATTATGCTGGTGCTCTTGAACACTATGAGAATG
CTCTTAAACTCACACCCAAAATTCATCCTGACAGAGCTGTTTTTCACAGC
AATAGGGCTGCTTGTTTGATGCAAATGAAACCTATTGATTATGAATCTGT
TATTTCTGAGTGTACTTTGGCTCTTCAGGTTCAGCCTTTGTTTGTTCGGG
CTCTTCTCCGTAGGGCTCGGGCGTTTGAGGCTGTTGGTAAGTATGAATTG
GCTGTGCAGGATGTGCAGTTGTTGTTGGCTTCTGATCCTAATCATAAGGA
TGCTTTGGATATTTCTCAGAGATTGAGGGCTGCGTTTGGGCCTCGTCAGG
AGGCCCAGCAGGATCTTCATAGTCGGCCTTCTCCTGCTGCTCTTGGGGCA
TCGGCTGTCCGTGGTGCCCCTATTGCGGGGTTAGGTCCATGTTTGCCTGC
ACGGCCTGGATCGAAGAAGGGGGTGAGTTCTGCAGTTGGGGCTGTTGTTT
CTCCGAATAACAAGGTTGACAAGTCTCAAAATGTTTTACTTACTGCTGAA
AATGGCTCGGAGACGACTAAGCGTCAGCAGAATGTTGCGTTGAAGCCTTT
AAGTAATGGTCCTGCAGTGCAACCTAACTCGAAAAATGTGAACCAGAAGG
GGATTAATGGGCAGCTGTCGGAGGTTGCGATTCGGTGGAGACCATTGAAG
CTTGTTTATGATCATGACATCAGGCTTGCTCAGATGCCGGTGAAATGTAG
TTTCAGAGTACTGAGAGATGTGGTAAGCAAAAGATTTCCTTCTTCGAATT
CAGTTCTGATCAAGTACAAGGATTGTGATGGTGATTTGGTTACTATAACG
TCTACGGATGAACTCAGATTGGCAGAGTCTTTTGTTGATAGCTATTTGCT
GAAAGAGCCTGAATCAGATAAAAGTGATTCCATTTCGGTGCTGAGACTTC
ATATTGTTGAAGTTAGTCCGGAACAGGAGCCACCTTTGTTGGAAGAAGAG
GAAGAAAAACTTGTTGAGAATGAAGTGGCCAAGGGAGATGAGAGTGGATC
TCATTCTTCCCTTGGTGAATCTGTCCCTGAAGTTACGGAAGTTACCGAGG
TTCCTGATATTGAGGTTGACAAGGTAGCTGCTAAGAAGGATGCTTCCAAG
GAAAAGCCGGGAGCCACCGGAGATAATGAATGCAAAGAAGTGGAGATGGA
TGATTGGTTGTTCGAATTTGCTCAGCTTTTCCGCTCACATGTTGGTATTG
ACCCGGATGCTCATATTGACTTGCACGAACTTGGGATGGAGCTTTGTTCT
GAGGCACTTGAAGAAACAGTAACTAGTGAGGAAGCTCAAGATTTATTCGA
CAAGGCTGCTTCAAAATTCCAGGAGGTGGCAGCATTGGCATTCTTCAACT
GGGGTAATGTTCACATGTGCGCGGCTAGAAAGCGGATTCCCTTAGATGAA
ACTGCTGGAAAAGAGGTAGTGGCAGAACAACTTCAAGTGGCTTATGACTG
GGTCAAGGAAAAGTATTCTTTGGCAAGAGAAAAATATGAGGAAGCACTCT
TGATCAAACCAGATTTCTACGAGGGGCTGTTGGCTCTAGGCCAGCAACAA
TTTGAAATGGCCAAACTCCATTGGTCTTTTGCAATTGCTAAGAAGATAGA
TTTAACAAGCTGGGATCCAACGGAAACTCTTGAATTGTTTAATAGTGCGG
AGGAGAAGATGAAAGCCGCAACAAATATGTGGGAGAAGTTGGAGGAACAG
AGAGCAAAGGAGCTAAAAGACCCAAATGCAACTAAGAAAGAAGAATTATT
GAGAAGAAGGAAGAAACATGGCAGTACTACCGAAGGCGAGGCTTCTGGTG
TTGGCGGTCAGAGTGAGATATCTGCCGAAGAAGCCGCTGAGCAAGCAGTG
GTCATGAGATCACAGATTCATCTCTTTTGGGGAAATATGCTTTTCGAAAA
ATCCCAAGTTGAATGCAAATTAGGAATGGATGGTTGGAAGAAAAACCTAG
ATGCTGCAACAGAAAGGTTCAAGCTTGCAGGAGCTTCTGAGGCAGATATT
TCAATGGTTCTAAAGAATCATTCTTCTAATGGTGATGCAAAAGGTGATGA
TAAAAAGGTTCAGAGTACACTGCCCAACAAGACGGGTGAACTAGAGATCA
ATAAGGCAAATCAAGAATGAGATAAATGATGTGTGGCTATGAAATCTTAT
TCGTTTTTGTTCAGTCACTTCTTCAATGAAAGATTATGGACAAAGAATAT
CCTTGGCATCAAGAGCTCAAAAGTAATGTCTGAATTTTTCGGAAATTGAA
ATTGAAAATTTAGGGTACTTCAATTAGATAGTTCTCTGCCCTTTTTTCTC
TGAAGTTCTTGGAATCTGATGAAGGGGAGATTGTTTTTTAACATTATTTA
CGCAGGTATGAATTTCTGATGATCAATTTTTGTTGCTCAGTCATTTTTGT
CCCCTGTTTTATCCTTTGTACTGTTGCAATTTATTGGATTGTATACCTGT
TCAACTCTTGACATTTTATTTGCCTTGTTGGGTCTTTACCAGTGTGCTAC
ATGTATTGCTGATTTTATTTTATAAGTTACTATAACCCAAGTTTTATATG
GTTAAGTTATGAGTTGTCGAATGTGTTTCTTTCATAAACACTGGTTAGTG
TTTGAAGGGTCTGTTAAAAATTGGAAAAAAAATATACTCTCCAAATCCAA
AGTAAAGAAAAATCTGTGGATCCTCTGCACTGATGAATGGTTTCTATCAT
TGAGTGCACAGGACAAGTTTCTTGTCTGTGTGATTTTATTATTATTGTGT
GGTGATATGGACTTAGATAGGTCAGTGTGAATGTTTCCCACGTTTCAGCC
TAAATTACGTACCATGTTGTTCTACTTTGCTGAAAGTACTCCACTAGATA
ACGATAACACAATTGTTTGATTTTAAAATAGAGAATTCTTAATTACCCCT
CAACAAGTAAAGTTACCGGAGGATTTAATAAACGATTAAATACAATAAAA
TGAAGTCGTATTAATGGATTGGTCTACTGCACTCATTCTTTTTAATCTCG
CGCTCAACTCTACATATTCTCCTCTATTTCTCTTCTCTCTATCCGCACTC
ATTTTCTATGGGTTTGAATTGATTTATTTGAGTTTGTGTCTTTGAGATAA
ATTTTGTGACAATGTTTAAGAGACTTTATATAAATTAGACATTTTTTATA
AGATTTTTTAGAAGGATTACTTTAAGATATACCTCAAGGAGATAAGCTCT
TTCTAGAAGGAGATTTAAATGAATATATATAAATGAATATATAGGGAGTG
TAGCAAGAGGTTTTGAAGGCGTGCAGGTGGGATATGGTCTCGGGGAGGTA
AATGCGGAAGATAAATTCAATTTGGAGTTTTCTTCGGATTTTGATCTTAT
TATAATTAATATTTGATTTGAAAAAGAGATGGACATCTTATTACATATAA
GAGTGAGG
back to top

Coding sequence (CDS) from alignment at chr4LG4:3737693..3741850+

>Psat4g003160.1_Ps_Cameor_v1a ID=Psat4g003160.1_Ps_Cameor_v1a; Name=Psat4g003160.1; organism=Pisum sativum; type=CDS; length=4632bp; location=Sequence derived from: chr4LG4:3737693..3741850+ (Pisum sativum
ATGGGGAAATCTGGGGGTAGAAGGAAGAAGGGTGGTGCGGTTGTTGTTGA
CAATTCAGTTTCTGCACAAACTCCGAATGGTGGTGTTGAGTTGGATTCAT
CAATTTTTTTGAAAAAGGCACATGAAATGAAGGAAGAAGGGAATAGGAGA
TTTCAGAGTAAGGATTATGCTGGTGCTCTTGAACACTATGAGAATGCTCT
TAAACTCACACCCAAAATTCATCCTGACAGAGCTGTTTTTCACAGCAATA
GGGCTGCTTGTTTGATGCAAATGAAACCTATTGATTATGAATCTGTTATT
TCTGAGTGTACTTTGGCTCTTCAGGTTCAGCCTTTGTTTGTTCGGGCTCT
TCTCCGTAGGGCTCGGGCGTTTGAGGCTGTTGGTAAGTATGAATTGGCTG
TGCAGGATGTGCAGTTGTTGTTGGCTTCTGATCCTAATCATAAGGATGCT
TTGGATATTTCTCAGAGATTGAGGGCTGCGTTTGGGCCTCGTCAGGAGGC
CCAGCAGGATCTTCATAGTCGGCCTTCTCCTGCTGCTCTTGGGGCATCGG
CTGTCCGTGGTGCCCCTATTGCGGGGTTAGGTCCATGTTTGCCTGCACGG
CCTGGATCGAAGAAGGGGGTGAGTTCTGCAGTTGGGGCTGTTGTTTCTCC
GAATAACAAGGTTGACAAGTCTCAAAATGTTTTACTTACTGCTGAAAATG
GCTCGGAGACGACTAAGCGTCAGCAGAATGTTGCGTTGAAGCCTTTAAGT
AATGGTCCTGCAGTGCAACCTAACTCGAAAAATGTGAACCAGAAGGGGAT
TAATGGGCAGCTGTCGGAGGTTGCGATTCGGTGGAGACCATTGAAGCTTG
TTTATGATCATGACATCAGGCTTGCTCAGATGCCGGTGAAATGTAGTTTC
AGAGTACTGAGAGATGTGGTAAGCAAAAGATTTCCTTCTTCGAATTCAGT
TCTGATCAAGTACAAGGATTGTGATGGTGATTTGGTTACTATAACGTCTA
CGGATGAACTCAGATTGGCAGAGTCTTTTGTTGATAGCTATTTGCTGAAA
GAGCCTGAATCAGATAAAAGTGATTCCATTTCGGTGCTGAGACTTCATAT
TGTTGAAGTTAGTCCGGAACAGGAGCCACCTTTGTTGGAAGAAGAGGAAG
AAAAACTTGTTGAGAATGAAGTGGCCAAGGGAGATGAGAGTGGATCTCAT
TCTTCCCTTGGTGAATCTGTCCCTGAAGTTACGGAAGTTACCGAGGTTCC
TGATATTGAGGTTGACAAGGTAGCTGCTAAGAAGGATGCTTCCAAGGAAA
AGCCGGGAGCCACCGGAGATAATGAATGCAAAGAAGTGGAGATGGATGAT
TGGTTGTTCGAATTTGCTCAGCTTTTCCGCTCACATGTTGGTATTGACCC
GGATGCTCATATTGACTTGCACGAACTTGGGATGGAGCTTTGTTCTGAGG
CACTTGAAGAAACAGTAACTAGTGAGGAAGCTCAAGATTTATTCGACAAG
GCTGCTTCAAAATTCCAGGAGGTGGCAGCATTGGCATTCTTCAACTGGGG
TAATGTTCACATGTGCGCGGCTAGAAAGCGGATTCCCTTAGATGAAACTG
CTGGAAAAGAGGTAGTGGCAGAACAACTTCAAGTGGCTTATGACTGGGTC
AAGGAAAAGTATTCTTTGGCAAGAGAAAAATATGAGGAAGCACTCTTGAT
CAAACCAGATTTCTACGAGGGGCTGTTGGCTCTAGGCCAGCAACAATTTG
AAATGGCCAAACTCCATTGGTCTTTTGCAATTGCTAAGAAGATAGATTTA
ACAAGCTGGGATCCAACGGAAACTCTTGAATTGTTTAATAGTGCGGAGGA
GAAGATGAAAGCCGCAACAAATATGTGGGAGAAGTTGGAGGAACAGAGAG
CAAAGGAGCTAAAAGACCCAAATGCAACTAAGAAAGAAGAATTATTGAGA
AGAAGGAAGAAACATGGCAGTACTACCGAAGGCGAGGCTTCTGGTGTTGG
CGGTCAGAGTGAGATATCTGCCGAAGAAGCCGCTGAGCAAGCAGTGGTCA
TGAGATCACAGATTCATCTCTTTTGGGGAAATATGCTTTTCGAAAAATCC
CAAGTTGAATGCAAATTAGGAATGGATGGTTGGAAGAAAAACCTAGATGC
TGCAACAGAAAGGTTCAAGCTTGCAGGAGCTTCTGAGGCAGATATTTCAA
TGGTTCTAAAGAATCATTCTTCTAATGGTGATGCAAAAGGTGATGATAAA
AAGGTTCAGAGTACACTGCCCAACAAGACGGGTGAACTAGAGATCAATAA
GGCAAATCAAGAATGAATGGGGAAATCTGGGGGTAGAAGGAAGAAGGGTG
GTGCGGTTGTTGTTGACAATTCAGTTTCTGCACAAACTCCGAATGGTGGT
GTTGAGTTGGATTCATCAATTTTTTTGAAAAAGGCACATGAAATGAAGGA
AGAAGGGAATAGGAGATTTCAGAGTAAGGATTATGCTGGTGCTCTTGAAC
ACTATGAGAATGCTCTTAAACTCACACCCAAAATTCATCCTGACAGAGCT
GTTTTTCACAGCAATAGGGCTGCTTGTTTGATGCAAATGAAACCTATTGA
TTATGAATCTGTTATTTCTGAGTGTACTTTGGCTCTTCAGGTTCAGCCTT
TGTTTGTTCGGGCTCTTCTCCGTAGGGCTCGGGCGTTTGAGGCTGTTGGT
AAGTATGAATTGGCTGTGCAGGATGTGCAGTTGTTGTTGGCTTCTGATCC
TAATCATAAGGATGCTTTGGATATTTCTCAGAGATTGAGGGCTGCGTTTG
GGCCTCGTCAGGAGGCCCAGCAGGATCTTCATAGTCGGCCTTCTCCTGCT
GCTCTTGGGGCATCGGCTGTCCGTGGTGCCCCTATTGCGGGGTTAGGTCC
ATGTTTGCCTGCACGGCCTGGATCGAAGAAGGGGGTGAGTTCTGCAGTTG
GGGCTGTTGTTTCTCCGAATAACAAGGTTGACAAGTCTCAAAATGTTTTA
CTTACTGCTGAAAATGGCTCGGAGACGACTAAGCGTCAGCAGAATGTTGC
GTTGAAGCCTTTAAGTAATGGTCCTGCAGTGCAACCTAACTCGAAAAATG
TGAACCAGAAGGGGATTAATGGGCAGCTGTCGGAGGTTGCGATTCGGTGG
AGACCATTGAAGCTTGTTTATGATCATGACATCAGGCTTGCTCAGATGCC
GGTGAAATGTAGTTTCAGAGTACTGAGAGATGTGGTAAGCAAAAGATTTC
CTTCTTCGAATTCAGTTCTGATCAAGTACAAGGATTGTGATGGTGATTTG
GTTACTATAACGTCTACGGATGAACTCAGATTGGCAGAGTCTTTTGTTGA
TAGCTATTTGCTGAAAGAGCCTGAATCAGATAAAAGTGATTCCATTTCGG
TGCTGAGACTTCATATTGTTGAAGTTAGTCCGGAACAGGAGCCACCTTTG
TTGGAAGAAGAGGAAGAAAAACTTGTTGAGAATGAAGTGGCCAAGGGAGA
TGAGAGTGGATCTCATTCTTCCCTTGGTGAATCTGTCCCTGAAGTTACGG
AAGTTACCGAGGTTCCTGATATTGAGGTTGACAAGGTAGCTGCTAAGAAG
GATGCTTCCAAGGAAAAGCCGGGAGCCACCGGAGATAATGAATGCAAAGA
AGTGGAGATGGATGATTGGTTGTTCGAATTTGCTCAGCTTTTCCGCTCAC
ATGTTGGTATTGACCCGGATGCTCATATTGACTTGCACGAACTTGGGATG
GAGCTTTGTTCTGAGGCACTTGAAGAAACAGTAACTAGTGAGGAAGCTCA
AGATTTATTCGACAAGGCTGCTTCAAAATTCCAGGAGGTGGCAGCATTGG
CATTCTTCAACTGGGGTAATGTTCACATGTGCGCGGCTAGAAAGCGGATT
CCCTTAGATGAAACTGCTGGAAAAGAGGTAGTGGCAGAACAACTTCAAGT
GGCTTATGACTGGGTCAAGGAAAAGTATTCTTTGGCAAGAGAAAAATATG
AGGAAGCACTCTTGATCAAACCAGATTTCTACGAGGGGCTGTTGGCTCTA
GGCCAGCAACAATTTGAAATGGCCAAACTCCATTGGTCTTTTGCAATTGC
TAAGAAGATAGATTTAACAAGCTGGGATCCAACGGAAACTCTTGAATTGT
TTAATAGTGCGGAGGAGAAGATGAAAGCCGCAACAAATATGTGGGAGAAG
TTGGAGGAACAGAGAGCAAAGGAGCTAAAAGACCCAAATGCAACTAAGAA
AGAAGAATTATTGAGAAGAAGGAAGAAACATGGCAGTACTACCGAAGGCG
AGGCTTCTGGTGTTGGCGGTCAGAGTGAGATATCTGCCGAAGAAGCCGCT
GAGCAAGCAGTGGTCATGAGATCACAGATTCATCTCTTTTGGGGAAATAT
GCTTTTCGAAAAATCCCAAGTTGAATGCAAATTAGGAATGGATGGTTGGA
AGAAAAACCTAGATGCTGCAACAGAAAGGTTCAAGCTTGCAGGAGCTTCT
GAGGCAGATATTTCAATGGTTCTAAAGAATCATTCTTCTAATGGTGATGC
AAAAGGTGATGATAAAAAGGTTCAGAGTACACTGCCCAACAAGACGGGTG
AACTAGAGATCAATAAGGCAAATCAAGAATGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR000270PB1_dom
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding