Psat4g003440.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Psat4g003440.1 vs. DB:Swiss
Match: INT3_MOUSE (Integrator complex subunit 3 OS=Mus musculus OX=10090 GN=Ints3 PE=1 SV=2) HSP 1 Score: 280.411 bits (716), Expect = 3.180e-83 Identity = 150/412 (36.41%), Postives = 253/412 (61.41%), Query Frame = 1 Query: 127 PDEYAQLNCAILHGILTEPQFAKTHIKHMHAVVTDGYAIFLNLLLKSVYHLYPKLLSSVKNQLLWVTKEMVRVSAIGYDVLLVSLLRQIIGGDFSDDNXXXXXXXXXXXXDKWDCFLEEVPHILCSALYVFLRVLADHCRLNGEKLESLKRLEVHLCVKIVKEEFHLCLKIGRDFVRLLQDLVHVPDFKSIWKDLILNPSKFNTLGFGAVSQIYCTRTSSRYALLRITPEMETQLRFLLTHVKLGHEKRHLTWFARKFLNEPDKETVIVDIVRFICCAHHPPNEIIQSDVIPRWAVIGWLLTTCRRKNYIEANVKLALFYDWLFFDERVDNIMNIEPAILLMVHSIPQYVDMTNTXXXXXXXXVDNYDMEHKDIIVKSVSSAFRFLESKGVIKSLDVLTSCPTISPSLKEGL 1362 P ++ ++ + +LTEP A+ + + V DG I LN + + + Y KL + + QL+W+ +E+V+ +G D + ++ ++QI GGD + N+WL ++ +L ++ + L+ ++ A+Y +LR++ DH +L++L++ EV C+ +++E F CL IGRD VRLLQ++ +P+F+ +WKD+I NP + F + Q+ +RTS ++ R+TP+MET+L F+ + V+ G +KR+ WF R++L+ PD +++ D++R+IC HP NE++ SD++PRWA+IGWLLTTC N +N KLALFYDWLFF D+IMNIEPAIL+M HS+ + +T TLL+F+ ++ N+ + + + V S+ + K V+ L L P + L+ L Sbjct: 82 PPQHEEICLGLFTLVLTEPAQAQKCYRDLALVSRDGMNIVLNKINQLLMEKYLKLQDTCRTQLVWLVRELVKSGVLGADGVCMTFMKQIAGGDVTAKNIWLAESVLDILTEQREWVLKS-SILIAMAVYTYLRLIVDH--HGTAQLQTLRQKEVDFCISLLRERFMECLMIGRDLVRLLQNVARIPEFELLWKDIIHNPQALSP-QFTGILQLLQSRTSRKFLACRLTPDMETKLLFMTSRVRFGQQKRYQDWFQRQYLSTPDSQSLRCDLIRYICGVVHPSNEVLSSDILPRWAIIGWLLTTC-TSNVAASNAKLALFYDWLFFSPEKDSIMNIEPAILVMHHSMKPHPAITATLLDFMCRIIPNFYPPLEGHVRQGVFSSLNHIVEKRVLAHLAPLFDNPKLDKELRSML 488
BLAST of Psat4g003440.1 vs. DB:Swiss
Match: INT3_PONAB (Integrator complex subunit 3 OS=Pongo abelii OX=9601 GN=INTS3 PE=2 SV=1) HSP 1 Score: 276.944 bits (707), Expect = 7.121e-82 Identity = 149/398 (37.44%), Postives = 246/398 (61.81%), Query Frame = 1 Query: 169 ILTEPQFAKTHIKHMHAVVTDGYAIFLNLLLKSVYHLYPKLLSSVKNQLLWVTKEMVRVSAIGYDVLLVSLLRQIIGGDFSDDNXXXXXXXXXXXXDKWDCFLEEVPHILCSALYVFLRVLADHCRLNGEKLESLKRLEVHLCVKIVKEEFHLCLKIGRDFVRLLQDLVHVPDFKSIWKDLILNPSKFNTLGFGAVSQIYCTRTSSRYALLRITPEMETQLRFLLTHVKLGHEKRHLTWFARKFLNEPDKETVIVDIVRFICCAHHPPNEIIQSDVIPRWAVIGWLLTTCRRKNYIEANVKLALFYDWLFFDERVDNIMNIEPAILLMVHSIPQYVDMTNTXXXXXXXXVDNYDMEHKDIIVKSVSSAFRFLESKGVIKSLDVLTSCPTISPSLKEGL 1362 ILTEP A+ + + V DG I LN + + + Y KL + + QL+W+ +E+V+ +G D + ++ ++QI GGD + N+WL ++ +L ++ + L+ ++ A+Y +LR++ DH +L++L++ EV C+ +++E F CL IGRD VRLLQ++ +P+F+ +WKD+I NP + F + Q+ +RTS ++ R+TP+MET+L F+ + V+ G +KR+ WF R++L+ PD +++ D++R+IC HP NE++ SD++PRWA+IGWLLT C N +N KLALFYDWLFF D+IMNIEPAIL+M HS+ + +T TLL+F+ ++ N+ + + + V S+ + K V+ L L P + L+ L Sbjct: 98 ILTEPAQAQKCYRDLALVSRDGMNIVLNKINQILMEKYLKLQDTCRTQLVWLVRELVKSGVLGADGVCMTFMKQIAGGDVTAKNIWLAESVLDILTEQREWVLKS-SILIAMAVYTYLRLIVDH--HGTAQLQALRQKEVDFCISLLRERFMECLMIGRDLVRLLQNVARIPEFELLWKDIIHNPQALSP-QFTGILQLLQSRTSRKFLACRLTPDMETKLLFMTSRVRFGQQKRYQDWFQRQYLSTPDSQSLRCDLIRYICGVVHPSNEVLSSDILPRWAIIGWLLTAC-TSNVAASNAKLALFYDWLFFSPDKDSIMNIEPAILVMHHSMKPHPAITATLLDFMCRIIPNFYPPLEGHVRQGVFSSLNHIVEKRVLAHLAPLFDNPKLDKELRAML 490
BLAST of Psat4g003440.1 vs. DB:Swiss
Match: INT3_HUMAN (Integrator complex subunit 3 OS=Homo sapiens OX=9606 GN=INTS3 PE=1 SV=1) HSP 1 Score: 274.248 bits (700), Expect = 7.177e-81 Identity = 150/399 (37.59%), Postives = 247/399 (61.90%), Query Frame = 1 Query: 169 ILTEPQFAKTHIKHMHAVVTDGYAIFLNLLLKSVYHLYPKLLSSVKNQLLWVTKEMVRVSAIGYDVLLVSLLRQIIGG-DFSDDNXXXXXXXXXXXXDKWDCFLEEVPHILCSALYVFLRVLADHCRLNGEKLESLKRLEVHLCVKIVKEEFHLCLKIGRDFVRLLQDLVHVPDFKSIWKDLILNPSKFNTLGFGAVSQIYCTRTSSRYALLRITPEMETQLRFLLTHVKLGHEKRHLTWFARKFLNEPDKETVIVDIVRFICCAHHPPNEIIQSDVIPRWAVIGWLLTTCRRKNYIEANVKLALFYDWLFFDERVDNIMNIEPAILLMVHSIPQYVDMTNTXXXXXXXXVDNYDMEHKDIIVKSVSSAFRFLESKGVIKSLDVLTSCPTISPSLKEGL 1362 ILTEP A+ + + V DG I LN + + + Y KL + + QL+W+ +E+V+ +G D + ++ ++QI GG D + N+WL ++ +L ++ + L+ ++ A+Y +LR++ DH +L++L++ EV C+ +++E F CL IGRD VRLLQ++ +P+F+ +WKD+I NP + F + Q+ +RTS ++ R+TP+MET+L F+ + V+ G +KR+ WF R++L+ PD +++ D++R+IC HP NE++ SD++PRWA+IGWLLTTC N +N KLALFYDWLFF D+IMNIEPAIL+M HS+ + +T TLL+F+ ++ N+ + + + V S+ + K V+ L L P + L+ L Sbjct: 97 ILTEPAQAQKCYRDLALVSRDGMNIVLNKINQILMEKYLKLQDTCRTQLVWLVRELVKSGVLGADGVCMTFMKQIAGGGDVTAKNIWLAESVLDILTEQREWVLKS-SILIAMAVYTYLRLIVDH--HGTAQLQALRQKEVDFCISLLRERFMECLMIGRDLVRLLQNVARIPEFELLWKDIIHNPQALSP-QFTGILQLLQSRTSRKFLACRLTPDMETKLLFMTSRVRFGQQKRYQDWFQRQYLSTPDSQSLRCDLIRYICGVVHPSNEVLSSDILPRWAIIGWLLTTC-TSNVAASNAKLALFYDWLFFSPDKDSIMNIEPAILVMHHSMKPHPAITATLLDFMCRIIPNFYPPLEGHVRQGVFSSLNHIVEKRVLAHLAPLFDNPKLDKELRAML 490
BLAST of Psat4g003440.1 vs. DB:Swiss
Match: INT3_DANRE (Integrator complex subunit 3 OS=Danio rerio OX=7955 GN=ints3 PE=2 SV=1) HSP 1 Score: 265.774 bits (678), Expect = 5.976e-78 Identity = 146/412 (35.44%), Postives = 250/412 (60.68%), Query Frame = 1 Query: 127 PDEYAQLNCAILHGILTEPQFAKTHIKHMHAVVTDGYAIFLNLLLKSVYHLYPKLLSSVKNQLLWVTKEMVRVSAIGYDVLLVSLLRQIIGGDFSDDNXXXXXXXXXXXXDKWDCFLEEVPHILCSALYVFLRVLADHCRLNGEKLESLKRLEVHLCVKIVKEEFHLCLKIGRDFVRLLQDLVHVPDFKSIWKDLILNPSKFNTLGFGAVSQIYCTRTSSRYALLRITPEMETQLRFLLTHVKLGHEKRHLTWFARKFLNEPDKETVIVDIVRFICCAHHPPNEIIQSDVIPRWAVIGWLLTTCRRKNYIEANVKLALFYDWLFFDERVDNIMNIEPAILLMVHSIPQYVDMTNTXXXXXXXXVDNYDMEHKDIIVKSVSSAFRFLESKGVIKSLDVLTSCPTISPSLKEGL 1362 P ++ ++ + +LTEP A+ + + V DG + L + + + + KL + QL+W+ +E+V+ IG D +L++L++QI GGD S NLWL ++ +L+D+ + L+ ++ +LY +LR++ DH L L++ EV C+ +++E F C IGRD VRLLQ++ +P+ + +W+DL+ +P + F + Q+ +RTS ++ R+TP+MET+L F+ + V+ G +KR+ WF R++L+ + +++ D++R+IC HP NE++ SD++PRWA+IGWLLTTC N +N KLALFYDWLFF+ D+IMNIEPAIL+M HS+ + +T TLL+F+ ++ ++ + + + V ++ F+ K V+ L L P + L+ L Sbjct: 61 PQQHEEVCLGLFTLLLTEPPQAQRCYRDLTLVNRDGMNVVLMKINQILMEKFLKLQDVCRTQLVWLVRELVKSGVIGADGVLMTLMKQIAGGDISSKNLWLAENVLDILVDQREWVLKS-GMLVAMSLYTYLRLIVDH---GTTSLLPLRQREVDFCIGLLRERFMECFIIGRDLVRLLQNVARIPEMELVWRDLLHSPQTLSP-QFTGILQLLTSRTSRKFLACRLTPDMETKLLFMTSRVRFGQQKRYQDWFQRQYLSTAESQSLRCDLIRYICGVVHPSNEVLSSDILPRWAIIGWLLTTC-TSNVAASNAKLALFYDWLFFNPEKDSIMNIEPAILVMHHSMKPHPAITATLLDFMCRIIPHFFPPLEGQVRQGVFNSLNFIMEKRVLAHLAPLFDNPKLDRELRSML 466
BLAST of Psat4g003440.1 vs. DB:Swiss
Match: INT3_DROER (Integrator complex subunit 3 homolog OS=Drosophila erecta OX=7220 GN=IntS3 PE=3 SV=1) HSP 1 Score: 264.233 bits (674), Expect = 3.737e-77 Identity = 148/410 (36.10%), Postives = 242/410 (59.02%), Query Frame = 1 Query: 124 KPDEYAQLNCAILHGILTEPQFAKTHIKHMHAVVTDGYAIFLNLLLKSVYHLYPKLLSSVKNQLLWVTKEMVRVSAIGYDVLLVSLLRQIIGGDFSDDNXXXXXXXXXXXXDKWDCFLEEVPHILCSALYVFLRVLADHCRLNGEKLESLKRLEVHLCVKIVKEEFHLCLKIGRDFVRLLQDLVHVPDFKSIWKDLILNPSKFNTLGFGAVSQIYCTRTSSRYALLRITPEMETQLRFLLTHVKLGHEKRHLTWFARKFLNEPDKETVIVDIVRFICCAHHPPNEIIQSDVIPRWAVIGWLLTTCRRKNYIEANVKLALFYDWLFFDERVDNIMNIEPAILLMVHSIPQYVDMTNTXXXXXXXXVDNYDMEHKDIIVKSVSSAFRFLESKGVIKSLDVLTSCPTISPSLK 1353 K ++ +++ L+ +LT+P A + + V DG + L V Y KL + QL+W+ +E V+ + + ++ + LRQ GGD S NL+L L+ + ++ + +LE P ++ S +Y F+R++ DH L SL++ EV + +++E FH + +GRDFVRLLQ++ +P+F+ +W+D++ NP N F + Q+ RTS R+ R+ PEME ++ FL + VK G++KR+ WF K+ P+ ++ D++RFI HP N+++ SD+IPRWA+IGWL+++C AN KL+LFYDWLFFD DNIMNIEP IL+M HSI + +++TLL+FL + N+ ++H+D I V ++ + + K VI +L L P + L+ Sbjct: 60 KDKQHEEISIGFLYIMLTDPSMAPKTYRDVTLVSRDGMNGIVTNLTFLVAEKYTKLTEVARRQLIWLLREFVKHQVLSVENVIWNCLRQAGGGDVSSRNLFLIESLLDIFIE-FRTWLEGNPFLVQSTVYSFVRLIEDHA---NPALMSLRQKEVKFTISLIRERFHDIIPLGRDFVRLLQNVARIPEFEQLWRDILFNPKILNQ-TFNGIWQLLHIRTSRRFLQCRLLPEMERKISFLASSVKFGNQKRYQDWFQEKYFATPESHSLRSDLIRFIINVIHPTNDMLCSDIIPRWAIIGWLISSCTNP-IASANAKLSLFYDWLFFDPAKDNIMNIEPGILVMYHSIRNHPFVSSTLLDFLCRITKNFFVKHEDKIRIGVYNSLKLILEKQVIPNLQPLFESPKLDRELR 463
BLAST of Psat4g003440.1 vs. DB:Swiss
Match: INT3_DROMO (Integrator complex subunit 3 homolog OS=Drosophila mojavensis OX=7230 GN=IntS3 PE=3 SV=1) HSP 1 Score: 263.848 bits (673), Expect = 4.953e-77 Identity = 152/434 (35.02%), Postives = 254/434 (58.53%), Query Frame = 1 Query: 55 VSLKQSLKSL-EPSLRPPFTLTIPKPDEYAQLNCAILHGILTEPQFAKTHIKHMHAVVTDGYAIFLNLLLKSVYHLYPKLLSSVKNQLLWVTKEMVRVSAIGYDVLLVSLLRQIIGGDFSDDNXXXXXXXXXXXXDKWDCFLEEVPHILCSALYVFLRVLADHCRLNGEKLESLKRLEVHLCVKIVKEEFHLCLKIGRDFVRLLQDLVHVPDFKSIWKDLILNPSKFNTLGFGAVSQIYCTRTSSRYALLRITPEMETQLRFLLTHVKLGHEKRHLTWFARKFLNEPDKETVIVDIVRFICCAHHPPNEIIQSDVIPRWAVIGWLLTTCRRKNYIEANVKLALFYDWLFFDERVDNIMNIEPAILLMVHSIPQYVDMTNTXXXXXXXXVDNYDMEHKDIIVKSVSSAFRFLESKGVIKSLDVLTSCPTISPSLK 1353 SL+Q + L + + T + K ++ +++ L+ ILT+P A + + V DG + + L V Y KL + + QL+WV +E V+ + + ++ + LRQ GGD S NL+L L+ + ++ + +LE P ++ S++Y F+R++ DH L SL++ EV + ++++ FH + +GRDFVRLLQ++ +P+F+ +W+D++ NP + F + + RTS R+ R+ PEME +L FL + VK G++KR+ WF K+ P+ ++ D++RFI HP N+++ SD+IPRWA+IGWL+++C AN KL+LFYDWLFFD DNIMNIEP IL+M HSI + +++TLL+FL + N+ ++++D I V ++ + + K VI +L L P + L+ Sbjct: 36 ASLQQQIAGLSDKEMHDMLTQFVCKEKQHEEISIGFLYIILTDPAMAPKTYRDITLVSRDGMNVIVANLTLLVAEKYTKLTETARRQLIWVLREFVKHQVLSVENVIWNCLRQAGGGDVSHKNLFLVESLLDIFIE-YRAWLETNPFLVQSSVYSFVRLIEDHA---NPALISLRQKEVKFTISLIRDRFHDIIPLGRDFVRLLQNVARIPEFEQLWRDILYNPKSLHP-TFNGIWHLLQIRTSRRFLQCRLLPEMERKLHFLASSVKFGNQKRYQDWFQDKYFATPESHSLRSDLIRFIINVIHPTNDMLCSDIIPRWAIIGWLISSCTNP-IASANAKLSLFYDWLFFDPAKDNIMNIEPGILVMYHSIRNHPFVSSTLLDFLCRITKNFYIKNEDKIRLGVYNSLKLILDKQVIPNLHPLFESPKLDRELR 463
BLAST of Psat4g003440.1 vs. DB:Swiss
Match: INT3_DROGR (Integrator complex subunit 3 homolog OS=Drosophila grimshawi OX=7222 GN=IntS3 PE=3 SV=1) HSP 1 Score: 263.848 bits (673), Expect = 5.609e-77 Identity = 153/434 (35.25%), Postives = 255/434 (58.76%), Query Frame = 1 Query: 55 VSLKQSLKSL-EPSLRPPFTLTIPKPDEYAQLNCAILHGILTEPQFAKTHIKHMHAVVTDGYAIFLNLLLKSVYHLYPKLLSSVKNQLLWVTKEMVRVSAIGYDVLLVSLLRQIIGGDFSDDNXXXXXXXXXXXXDKWDCFLEEVPHILCSALYVFLRVLADHCRLNGEKLESLKRLEVHLCVKIVKEEFHLCLKIGRDFVRLLQDLVHVPDFKSIWKDLILNPSKFNTLGFGAVSQIYCTRTSSRYALLRITPEMETQLRFLLTHVKLGHEKRHLTWFARKFLNEPDKETVIVDIVRFICCAHHPPNEIIQSDVIPRWAVIGWLLTTCRRKNYIEANVKLALFYDWLFFDERVDNIMNIEPAILLMVHSIPQYVDMTNTXXXXXXXXVDNYDMEHKDIIVKSVSSAFRFLESKGVIKSLDVLTSCPTISPSLK 1353 VSL+Q + L + + T + K ++ +++ L+ ILT+P A + + V DG + + L V Y KL + + QL+WV +E V+ + + ++ + LRQ GGD S NL+L L+ + ++ + +LE P ++ S++Y F+R++ DH L SL++ EV + ++++ FH + +GRDFVRLLQ++ +P+F+ +W+D++ NP + F + + RTS R+ R+ PEME +L FL + VK G++KR+ WF K+ P+ ++ D++RFI HP N+++ SD+IPRWA+IGWL+++C AN KL+LFYDWLFFD DNIMNIEP IL+M HSI + +++TLL+FL + N+ ++++D I V ++ + + K VI +L L P + L+ Sbjct: 41 VSLQQQIAGLSDKEMHDILTQFVCKEKQHEEISIGFLYIILTDPAMAPKTYRDITLVSRDGMNVIVANLTLLVAEKYAKLTETARRQLIWVLREFVKHQVLSVENVIWNCLRQAGGGDVSHKNLYLVESLLDIFIE-YRAWLETNPFLVQSSVYSFVRLIEDHA---NPALISLRQKEVKFTISLIRDRFHDIIPLGRDFVRLLQNVARIPEFELLWRDILYNPKSLHP-TFNGIWHLLQIRTSRRFLQCRLLPEMERKLHFLASSVKFGNQKRYQDWFQDKYFATPESHSLRSDLIRFIINVIHPTNDMLCSDIIPRWAIIGWLISSCTNP-IASANAKLSLFYDWLFFDPAKDNIMNIEPGILVMYHSIRNHPFVSSTLLDFLCRITKNFYVKNEDRIRLGVYNSLKLILDKQVIPNLHPLFESPKLDRELR 468
BLAST of Psat4g003440.1 vs. DB:Swiss
Match: INT3_DROYA (Integrator complex subunit 3 homolog OS=Drosophila yakuba OX=7245 GN=IntS3 PE=3 SV=1) HSP 1 Score: 263.462 bits (672), Expect = 7.027e-77 Identity = 150/410 (36.59%), Postives = 242/410 (59.02%), Query Frame = 1 Query: 124 KPDEYAQLNCAILHGILTEPQFAKTHIKHMHAVVTDGYAIFLNLLLKSVYHLYPKLLSSVKNQLLWVTKEMVRVSAIGYDVLLVSLLRQIIGGDFSDDNXXXXXXXXXXXXDKWDCFLEEVPHILCSALYVFLRVLADHCRLNGEKLESLKRLEVHLCVKIVKEEFHLCLKIGRDFVRLLQDLVHVPDFKSIWKDLILNPSKFNTLGFGAVSQIYCTRTSSRYALLRITPEMETQLRFLLTHVKLGHEKRHLTWFARKFLNEPDKETVIVDIVRFICCAHHPPNEIIQSDVIPRWAVIGWLLTTCRRKNYIEANVKLALFYDWLFFDERVDNIMNIEPAILLMVHSIPQYVDMTNTXXXXXXXXVDNYDMEHKDIIVKSVSSAFRFLESKGVIKSLDVLTSCPTISPSLK 1353 K ++ +++ L+ +LT+P A + + V DG + L V Y KL + QL+W+ +E V+ + + ++ + LRQ GGD S NL+L L+ + ++ + +LE P ++ S +Y F+R++ DH L SL++ EV + +++E FH + +GRDFVRLLQ++ +P+F+ +W+DLI NP K F + Q+ RTS R+ R+ PEME ++ FL + VK G++KR+ WF K+ P+ ++ D++RFI HP N+++ SD+IPRWA+IGWL+++C AN KL+LFYDWLFFD DNIMNIEP IL+M HSI + +++TLL+FL + N+ ++H+D I V ++ + + K VI +L L P + L+ Sbjct: 60 KDKQHEEISIGFLYIMLTDPSMAPKTYRDVTLVSRDGMNGIVTNLTFLVAEKYTKLTEVARRQLIWLLREFVKHQVLSVENVIWNCLRQAGGGDVSSRNLFLIESLLDIFIE-FRTWLEGNPFLVQSTVYSFVRLIEDHA---NPALMSLRQKEVKFTISLIRERFHDIIPLGRDFVRLLQNVARIPEFEQLWRDLIFNP-KILHQTFNGIWQLLHIRTSRRFLQCRLLPEMERKISFLASSVKFGNQKRYQDWFQEKYFATPESHSLRSDLIRFIINVIHPTNDMLCSDIIPRWAIIGWLISSCTNP-IASANAKLSLFYDWLFFDPAKDNIMNIEPGILVMYHSIRNHPFVSSTLLDFLCRITKNFFVKHEDKIRIGVYNSLKLILEKQVIPNLQPLFESPKLDRELR 463
BLAST of Psat4g003440.1 vs. DB:Swiss
Match: INT3_DROVI (Integrator complex subunit 3 homolog OS=Drosophila virilis OX=7244 GN=IntS3 PE=3 SV=1) HSP 1 Score: 262.307 bits (669), Expect = 1.766e-76 Identity = 151/434 (34.79%), Postives = 254/434 (58.53%), Query Frame = 1 Query: 55 VSLKQSLKSL-EPSLRPPFTLTIPKPDEYAQLNCAILHGILTEPQFAKTHIKHMHAVVTDGYAIFLNLLLKSVYHLYPKLLSSVKNQLLWVTKEMVRVSAIGYDVLLVSLLRQIIGGDFSDDNXXXXXXXXXXXXDKWDCFLEEVPHILCSALYVFLRVLADHCRLNGEKLESLKRLEVHLCVKIVKEEFHLCLKIGRDFVRLLQDLVHVPDFKSIWKDLILNPSKFNTLGFGAVSQIYCTRTSSRYALLRITPEMETQLRFLLTHVKLGHEKRHLTWFARKFLNEPDKETVIVDIVRFICCAHHPPNEIIQSDVIPRWAVIGWLLTTCRRKNYIEANVKLALFYDWLFFDERVDNIMNIEPAILLMVHSIPQYVDMTNTXXXXXXXXVDNYDMEHKDIIVKSVSSAFRFLESKGVIKSLDVLTSCPTISPSLK 1353 VSL+Q + L + + T + K ++ +++ L+ ILT+P A + + V DG + + L V Y KL + + QL+WV +E V+ + + ++ + LRQ GGD S NL+L L+ + ++ + +LE +P ++ S++Y F+R++ DH L L++ EV + ++++ F + +GRDFVRLLQ++ +P+F+ +W+D++ NP + F + + RTS R+ R+ PEME +L FL + VK G++KR+ WF K+ P+ ++ D++RFI HP N+++ SD+IPRWA+IGWL+++C AN KL+LFYDWLFFD DNIMNIEP IL+M HSI + +++TLL+FL + N+ ++++D I V ++ + + K VI +L L P + L+ Sbjct: 36 VSLQQQIAGLSDKEMHDMLTQIVCKEKQHEEISIGFLYIILTDPAMAPKTYRDITLVSRDGMNVIVANLTLLVAEKYAKLTETARRQLIWVLREFVKHQVLSVENVIWNCLRQAGGGDVSHKNLFLVESLLDIFIE-YRAWLEAIPFLVQSSVYSFVRLIEDHA---NPALMPLRQKEVKFTISLIRDRFQDIIPLGRDFVRLLQNVARIPEFELLWRDILCNPKSLHP-TFNGIWHLLQIRTSRRFLQCRLLPEMERKLHFLASSVKFGNQKRYQDWFQDKYFATPESHSLRSDLIRFIINVIHPTNDMLCSDIIPRWAIIGWLISSCTNP-IASANAKLSLFYDWLFFDPAKDNIMNIEPGILVMYHSIRNHPFVSSTLLDFLCRITKNFYIKNEDKIRLGVYNSLKLILDKQVIPNLHPLFESPKLDRELR 463
BLAST of Psat4g003440.1 vs. DB:Swiss
Match: INT3_DROME (Integrator complex subunit 3 OS=Drosophila melanogaster OX=7227 GN=IntS3 PE=1 SV=1) HSP 1 Score: 261.922 bits (668), Expect = 2.678e-76 Identity = 147/410 (35.85%), Postives = 242/410 (59.02%), Query Frame = 1 Query: 124 KPDEYAQLNCAILHGILTEPQFAKTHIKHMHAVVTDGYAIFLNLLLKSVYHLYPKLLSSVKNQLLWVTKEMVRVSAIGYDVLLVSLLRQIIGGDFSDDNXXXXXXXXXXXXDKWDCFLEEVPHILCSALYVFLRVLADHCRLNGEKLESLKRLEVHLCVKIVKEEFHLCLKIGRDFVRLLQDLVHVPDFKSIWKDLILNPSKFNTLGFGAVSQIYCTRTSSRYALLRITPEMETQLRFLLTHVKLGHEKRHLTWFARKFLNEPDKETVIVDIVRFICCAHHPPNEIIQSDVIPRWAVIGWLLTTCRRKNYIEANVKLALFYDWLFFDERVDNIMNIEPAILLMVHSIPQYVDMTNTXXXXXXXXVDNYDMEHKDIIVKSVSSAFRFLESKGVIKSLDVLTSCPTISPSLK 1353 K ++ +++ L+ +LT+P A + + V DG + L V Y KL + QL+W+ +E V+ + + ++ + LRQ GGD S NL+L L+ + ++ + +LE P ++ S +Y F+R++ DH L SL++ EV + +++E FH + +GRDFVRLLQ++ +P+F+ +W+D++ NP + F + Q+ RTS R+ R+ PEME ++ FL + VK G++KR+ WF K+ P+ ++ D++RFI HP N+++ SD+IPRWA+IGWL+++C AN KL+LFYDWLFFD DNIMNIEP IL+M HSI + +++TLL+FL + N+ ++H+D I V ++ + + K VI +L L P + L+ Sbjct: 60 KEKQHEEISIGFLYIMLTDPSMASKTYRDVTLVSRDGMNGIVTNLTFLVAEKYTKLTEVARRQLIWLLREFVKHQVLSVENVIWNCLRQAGGGDVSSRNLFLIESLLDIFIE-FRTWLETNPFLVQSTVYSFVRLIEDHA---NPALLSLRQKEVKFTISLIRERFHDIIPLGRDFVRLLQNVARIPEFEQLWRDILFNPKMLHQ-TFNGIWQLLHIRTSRRFLQCRLLPEMERKISFLASSVKFGNQKRYQDWFQDKYFATPESHSLRSDLIRFIINVIHPTNDMLCSDIIPRWAIIGWLISSCTNP-IASANAKLSLFYDWLFFDPAKDNIMNIEPGILVMYHSIRNHPFVSSTLLDFLCRITKNFFVKHEDKIRIGVYNSLKLILEKQVIPNLQPLFESPKLDRELR 463 The following BLAST results are available for this feature:
BLAST of Psat4g003440.1 vs. DB:Swiss
Analysis Date: 2019-09-12 (BLAST: P. sativum Cameor genome v1a vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: P. sativum Cameor genome v1a
Date Performed: 2019-09-12
Sequences
The
following sequences are available for this feature:
mRNA sequence >Psat4g003440.1_Ps_Cameor_v1a ID=Psat4g003440.1_Ps_Cameor_v1a; Name=Psat4g003440.1; organism=Pisum sativum; type=mRNA; length=3274bpback to top protein sequence of Psat4g003440.1_Ps_Cameor_v1a >Psat4g003440.1_Ps_Cameor_v1a ID=Psat4g003440.1_Ps_Cameor_v1a; Name=Psat4g003440.1_Ps_Cameor_v1a; organism=Pisum sativum; type=polypeptide; length=474bpback to top mRNA from alignment at chr4LG4:3990297..3993570- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Psat4g003440.1_Ps_Cameor_v1a ID=Psat4g003440.1_Ps_Cameor_v1a; Name=Psat4g003440.1; organism=Pisum sativum; type=mRNA; length=3274bp; location=Sequence derived from: chr4LG4:3990297..3993570- (Pisum sativumback to top Coding sequence (CDS) from alignment at chr4LG4:3990297..3993570- >Psat4g003440.1_Ps_Cameor_v1a ID=Psat4g003440.1_Ps_Cameor_v1a; Name=Psat4g003440.1; organism=Pisum sativum; type=CDS; length=2844bp; location=Sequence derived from: chr4LG4:3990297..3993570- (Pisum sativumback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|