Psat4g003680.1
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Psat4g003680.1 vs. DB:Swiss
Match: PDSP4_ARATH (Probable tyrosine-protein phosphatase DSP4 OS=Arabidopsis thaliana OX=3702 GN=DSP4 PE=2 SV=1) HSP 1 Score: 281.567 bits (719), Expect = 1.762e-96 Identity = 126/165 (76.36%), Postives = 149/165 (90.30%), Query Frame = 1 Query: 91 EAFVPPLNFAMVDNGIFRSGFPDSANFGFMKSLRLRSVICLCPEPYPETTAEFLKANGIRLYQFGIDGCKEPFVNIPNDKIREALRVVLDVRNHPVLIHCKRGKHRTGCLVGCIRRLQRWCLSSIFDEYQRFAAAKARVSDQRFIELFDISSLKHNPLSFSCSRK 585
E FVPPLNFAMVDNGIFRSGFP+ +F F++SLRL+S+I LCPE YPE EF K+NGI+++QFGI+ CKEPFVNIP++ IREAL+V+LD NHPVLIHCK GKHRTGCLVGC+R++QRWCLSSIFDEYQRFAAAKAR+SDQRF+ELFDIS+LKH PLSFSCS++
Sbjct: 27 ELFVPPLNFAMVDNGIFRSGFPEPVSFSFLQSLRLKSIIYLCPEAYPEVNREFAKSNGIQVFQFGIERCKEPFVNIPDEVIREALQVLLDTENHPVLIHCKSGKHRTGCLVGCVRKIQRWCLSSIFDEYQRFAAAKARISDQRFMELFDISNLKHTPLSFSCSKR 191
BLAST of Psat4g003680.1 vs. DB:Swiss
Match: DSP1_ARATH (Tyrosine-protein phosphatase DSP1 OS=Arabidopsis thaliana OX=3702 GN=DSP1 PE=1 SV=1) HSP 1 Score: 280.411 bits (716), Expect = 8.433e-96 Identity = 129/191 (67.54%), Postives = 156/191 (81.68%), Query Frame = 1 Query: 7 LENSNSNGQISFPAAVDVTPLHNSDDTDEAFVPPLNFAMVDNGIFRSGFPDSANFGFMKSLRLRSVICLCPEPYPETTAEFLKANGIRLYQFGIDGCKEPFVNIPNDKIREALRVVLDVRNHPVLIHCKRGKHRTGCLVGCIRRLQRWCLSSIFDEYQRFAAAKARVSDQRFIELFDISSLKHNPLSFSCS 579
+E S N + + P + +PPLNF+MVDNGIFRSGFPDSANF F+++L LRS+I LCPEPYPE+ +FLK+NGIRL+QFGI+G KEPFVNIP+ KIR AL+V+LD +NHPVLIHCKRGKHRTGCLVGC+R+LQ+WCL+SIFDEYQRFAAAKARVSDQRF+E+FD+SS H P+SFSCS
Sbjct: 23 IEVSEVNRNVFQAPGGEADPFRVVSGEELHLIPPLNFSMVDNGIFRSGFPDSANFSFLQTLGLRSIIYLCPEPYPESNLQFLKSNGIRLFQFGIEGNKEPFVNIPDHKIRMALKVLLDEKNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLTSIFDEYQRFAAAKARVSDQRFMEIFDVSSFSHIPMSFSCS 213
BLAST of Psat4g003680.1 vs. DB:Swiss
Match: DSP2_ARATH (Tyrosine-protein phosphatase DSP2 OS=Arabidopsis thaliana OX=3702 GN=DSP2 PE=1 SV=1) HSP 1 Score: 258.455 bits (659), Expect = 1.573e-86 Identity = 121/197 (61.42%), Postives = 146/197 (74.11%), Query Frame = 1 Query: 97 FVPPLNFAMVDNGIFRSGFPDSANFGFMKSLRLRSVICLCPEPYPETTAEFLKANGIRLYQFGIDGCK----------------------------------EPFVNIPNDKIREALRVVLDVRNHPVLIHCKRGKHRTGCLVGCIRRLQRWCLSSIFDEYQRFAAAKARVSDQRFIELFDISSLKHNPLSFSCSRK 585
+PPLNF+MVDNGIFRSGFPDSANF F+K+L LRS+I LCPEPYPE +FLK+NGI L+QFGI+G K EPFV+I + KIREAL+V+LD +NHP+LIHCKRGKHRTGCLVGC+R+LQ+WC++SI DEY+RFAAAKARVSDQRF+E FD+S LKH P+SFSCS +
Sbjct: 61 LIPPLNFSMVDNGIFRSGFPDSANFSFIKTLGLRSIISLCPEPYPENNMQFLKSNGISLFQFGIEGSKSKCLPGLENEVWLHIWSSKHQKEDFYTNGNSKTSEPFVDILDQKIREALKVLLDEKNHPLLIHCKRGKHRTGCLVGCMRKLQKWCITSILDEYKRFAAAKARVSDQRFLESFDVSGLKHTPMSFSCSNR 257
BLAST of Psat4g003680.1 vs. DB:Swiss
Match: DSP2_ORYSJ (Probable tyrosine-protein phosphatase DSP2 OS=Oryza sativa subsp. japonica OX=39947 GN=DSP2 PE=2 SV=2) HSP 1 Score: 253.062 bits (645), Expect = 4.150e-85 Identity = 116/182 (63.74%), Postives = 141/182 (77.47%), Query Frame = 1 Query: 10 ENSNSNGQISFPAAVDVTPLHNSDDTDEAFVPPLNFAMVDNGIFRSGFPDSANFGFMKSLRLRSVICLCPEPYPETTAEFLKANGIRLYQFGIDGCKEPFVNIPNDKIREALRVVLDVRNHPVLIHCKRGKHRTGCLVGCIRRLQRWCLSSIFDEYQRFAAAKARVSDQRFIELFDISSLKH 555
E+ G+ + A + P D VPPLNFA V++GIFRSGFP + NF F+ SL+LRS++ LCPEPYPE FL+ NGI+L+QFGIDG KE VNIP +KIREAL+V+LDVRN PVLIHCKRGKHRTGC+VGC+R+LQ+WCL+S+FDEYQ FAAAKAR +DQRF+ELFD SSL H
Sbjct: 20 EHQQRAGEEAVGAVFSIEPW---VDAAAVLVPPLNFAEVNDGIFRSGFPAADNFAFLLSLKLRSIVYLCPEPYPEENTRFLEQNGIKLHQFGIDGSKELLVNIPEEKIREALKVILDVRNQPVLIHCKRGKHRTGCVVGCLRKLQKWCLTSVFDEYQHFAAAKARSTDQRFMELFDTSSLMH 198
BLAST of Psat4g003680.1 vs. DB:Swiss
Match: DSP3_ARATH (Tyrosine-protein phosphatase DSP3 OS=Arabidopsis thaliana OX=3702 GN=DSP3 PE=1 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 1.042e-69 Identity = 96/168 (57.14%), Postives = 124/168 (73.81%), Query Frame = 1 Query: 67 LHNSDDTDEAFVPPLNFAMVDNGIFRSGFPDSANFGFMKSLRLRSVICLCPEPYPETTAEFLKANGIRLYQFGIDGCKEPFVNIPNDKIREALRVVLDVRNHPVLIHCKRGKHRTGCLVGCIRRLQRWCLSSIFDEYQRFAAAKARVSDQRFIELFDISSLKHNPLSF 570
+ D + PP NF+MV++GI+RSGFP NF F+K+L LRS+I LCPEPYPE +FL+AN I+LYQFGI+G +P +P D + +AL+V++DVRNHP+LIHCKRGKHRTGCLVGC+R++Q WCLSS+ +EYQ+ A K R D FIE FDI SL+ LS
Sbjct: 5 METDDHNGDVLAPPSNFSMVEDGIYRSGFPRPENFSFLKTLNLRSIIYLCPEPYPEENLKFLEANNIKLYQFGIEGKTDPPTPMPKDTVLDALKVLVDVRNHPILIHCKRGKHRTGCLVGCLRKVQSWCLSSVLEEYQKNAGLKWRQRDLNFIEAFDIVSLRQCLLSI 172
BLAST of Psat4g003680.1 vs. DB:Swiss
Match: DSP5_ARATH (Tyrosine-protein phosphatase DSP5 OS=Arabidopsis thaliana OX=3702 GN=DSP5 PE=1 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 2.295e-67 Identity = 92/161 (57.14%), Postives = 121/161 (75.16%), Query Frame = 1 Query: 73 NSDDTDEAFVPPLNFAMVDNGIFRSGFPDSANFGFMKSLRLRSVICLCPEPYPETTAEFLKANGIRLYQFGIDGCKEPFVNIPNDKIREALRVVLDVRNHPVLIHCKRGKHRTGCLVGCIRRLQRWCLSSIFDEYQRFAAAKARVSDQRFIELFDISSLKH 555
+ D+ E +PP NF+MV++ I+RSGFP+ NFGF+ +L LRS+I LCPEPYPE + L +N I+L+QFGI+G +P +P D + ALRV++DVRNHP+LIHCKRGKHRTGCLVGC+R++Q WCLSS+ +EYQ+ A K R D RFIE FD+ LK
Sbjct: 6 DDDNDGEVLIPPPNFSMVEDEIYRSGFPELENFGFLSTLNLRSIIYLCPEPYPEDNLKSLASNNIKLFQFGIEGKTDPPTPMPKDTVLSALRVLVDVRNHPILIHCKRGKHRTGCLVGCLRKVQNWCLSSVLEEYQKCAGLKWRQRDLRFIEDFDVLRLKQ 166
BLAST of Psat4g003680.1 vs. DB:Swiss
Match: SIW14_YEAST (Tyrosine-protein phosphatase SIW14 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SIW14 PE=1 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 3.436e-58 Identity = 84/156 (53.85%), Postives = 112/156 (71.79%), Query Frame = 1 Query: 88 DEAFVPPLNFAMVDNGIFRSGFPDSANFGFM-KSLRLRSVICLCPEPYPETTAEFLKANGIRLYQFGIDGCKEPFVNIPNDKIREALRVVLDVRNHPVLIHCKRGKHRTGCLVGCIRRLQRWCLSSIFDEYQRFAAAKARVSDQRFIELFDISSLK 552
++ +PP NF+ V I+RS FP NF F+ + L+L+S++ L PE YP+ FLK GI+LYQ G+ G KEPFVNIP+ + +AL +VL+ N P+LIHC RGKHRTGCL+GCIR+LQ W L+ IFDEY+RFA KAR DQ+FIE++D +K
Sbjct: 113 NKEVIPPENFSHVVGEIYRSSFPRQENFSFLHERLKLKSILVLIPEEYPQENLNFLKLTGIKLYQVGMSGNKEPFVNIPSHLLTKALEIVLNPANQPILIHCNRGKHRTGCLIGCIRKLQNWSLTMIFDEYRRFAFPKARALDQQFIEMYDDDEIK 268
BLAST of Psat4g003680.1 vs. DB:Swiss
Match: D1060_DICDI (Probable tyrosine-protein phosphatase DG1060 OS=Dictyostelium discoideum OX=44689 GN=DG1060 PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 5.183e-43 Identity = 63/153 (41.18%), Postives = 103/153 (67.32%), Query Frame = 1 Query: 100 VPPLNFAMVDNGIFRSGFPDSANFGFMKSLRLRSVICLCPEPYPETTAEFLKANGIRLYQFGIDGCKEPFVNIPNDKIREALRVVLDVRNHPVLIHCKRGKHRTGCLVGCIRRLQRWCLSSIFDEYQRFAAAKARVSDQRFIELFDISSLKHN 558
+PPLNF MV + ++RSG P+ NF F++ L+L+ +I L P+ + F++ I L G+D + P+ I + + AL+++L+ N+P+ I C G+HRTG +VGC+R+LQRW L+SIF+EY+RFA +K ++ +++FIELFD + +N
Sbjct: 5 IPPLNFGMVADDLYRSGQPNELNFPFLEKLQLKKIIFLAPDDPSQQFQNFVEDQDIELIHLGMDTHQNPWNPISEEIVISALKIILNPDNYPLHIMCNLGRHRTGTVVGCLRKLQRWNLTSIFEEYRRFAGSKVKLLNEQFIELFDTDLVTYN 157
BLAST of Psat4g003680.1 vs. DB:Swiss
Match: OCA1_USTMA (Putative tyrosine-protein phosphatase OCA1 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=OCA1 PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 2.851e-35 Identity = 61/148 (41.22%), Postives = 89/148 (60.14%), Query Frame = 1 Query: 97 FVPPLNFAMVDNGIFRSGFPDSANFGFMKSLRLRSVICLCPEPYPETTAEFLKANGIRLYQFGIDGCKEPFVNIPNDKIREALRVVLDVRNHPVLIHCKRGKHRTGCLVGCIRRLQRWCLSSIFDEYQRFAAA-KARVSDQRFIELFD 537
VPP N+ MV+ +RSG PD NF F++ L L+SVI L PE +F I L+ G+ + I + + +AL +++ +PVL+ C G+HRTG +VGC R+LQRW LS+I +EY+RF K R+ +++FIELFD
Sbjct: 2 LVPPPNYGMVEENFYRSGQPDQLNFPFLEKLGLKSVIWLAPEEPEPGFLDFCVDQNIELHHLGVLYSTNAWDPITEEVVLQALHLLVQPATYPVLVMCNLGRHRTGTVVGCFRKLQRWNLSAILEEYRRFVGGQKYRILNEQFIELFD 149
BLAST of Psat4g003680.1 vs. DB:Swiss
Match: OCA1_KLULA (Putative tyrosine-protein phosphatase OCA1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=OCA1 PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 9.108e-31 Identity = 63/170 (37.06%), Postives = 103/170 (60.59%), Query Frame = 1 Query: 58 VTPLHNSDDTDEAFVPPLNFAMVDNGIFRSGFPDSANFGFMKSLRLRSVICLCPEPYPETTAEFLKANGIRLYQFGI--DGCKE--PFVNIPNDKIREALRVVLDVRNHPVLIHCKRGKHRTGCLVGCIRRLQRWCLSSIFDEYQRFAAAK-ARVSDQRFIELFDISSLK 552
VT LH +E VPPLNF V+ ++RSG P + NF F+ +L+L+++I L E + EF + I+L I DG ++ P+ + IR AL +++ ++P+L+ C G+HRTG ++GC+RRL W L+S+ +EY+RF ++ R+ + IE FDI+S++
Sbjct: 29 VTILH---PPNERIVPPLNFCPVERYLYRSGQPSNVNFPFLLNLKLKTIIWLANEEPQDALLEFCDDHNIQLQFAAINPDGGEDDNPWDGLTEHSIRNALHTIVNSESYPLLVCCGMGRHRTGTVIGCLRRLMGWNLASVSEEYRRFTGSRGGRILVELLIEAFDITSVE 195 The following BLAST results are available for this feature:
BLAST of Psat4g003680.1 vs. DB:Swiss
Analysis Date: 2019-09-12 (BLAST: P. sativum Cameor genome v1a vs. Swissprot) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan: P. sativum Cameor genome v1a
Date Performed: 2019-09-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Psat4g003680.1_Ps_Cameor_v1a ID=Psat4g003680.1_Ps_Cameor_v1a; Name=Psat4g003680.1; organism=Pisum sativum; type=mRNA; length=2869bpback to top protein sequence of Psat4g003680.1_Ps_Cameor_v1a >Psat4g003680.1_Ps_Cameor_v1a ID=Psat4g003680.1_Ps_Cameor_v1a; Name=Psat4g003680.1_Ps_Cameor_v1a; organism=Pisum sativum; type=polypeptide; length=196bpback to top mRNA from alignment at chr4LG4:4109085..4111953+ Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Psat4g003680.1_Ps_Cameor_v1a ID=Psat4g003680.1_Ps_Cameor_v1a; Name=Psat4g003680.1; organism=Pisum sativum; type=mRNA; length=2869bp; location=Sequence derived from: chr4LG4:4109085..4111953+ (Pisum sativumback to top Coding sequence (CDS) from alignment at chr4LG4:4109085..4111953+ >Psat4g003680.1_Ps_Cameor_v1a ID=Psat4g003680.1_Ps_Cameor_v1a; Name=Psat4g003680.1; organism=Pisum sativum; type=CDS; length=1176bp; location=Sequence derived from: chr4LG4:4109085..4111953+ (Pisum sativumback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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