Psat4g004040.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Psat4g004040.1 vs. DB:Swiss
Match: CYT1_ACTDE (Cysteine proteinase inhibitor 1 OS=Actinidia deliciosa OX=3627 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.527e-20 Identity = 36/84 (42.86%), Postives = 58/84 (69.05%), Query Frame = 1 Query: 43 GCYRPITDINDPDVIKVVKFAVTEYNKQSCAKLKFKKLTEGESQVVAWMNYNLTLSATEGSVLKIYETVVWERLLIHIQNLISF 294 G +RPI +N +V V +FAV+E+NKQ+ +L+++ + G +QVVA NY L ++A +G+V+ YE VVW++ +H +NL SF Sbjct: 30 GGWRPIESLNSAEVQDVAQFAVSEHNKQANDELQYQSVVRGYTQVVAGTNYRLVIAAKDGAVVGNYEAVVWDKPWMHFRNLTSF 113
BLAST of Psat4g004040.1 vs. DB:Swiss
Match: CYT5_ARATH (Cysteine proteinase inhibitor 5 OS=Arabidopsis thaliana OX=3702 GN=CYS5 PE=2 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 6.376e-20 Identity = 37/86 (43.02%), Postives = 60/86 (69.77%), Query Frame = 1 Query: 40 VGCYRPITDINDPDVIKVVKFAVTEYNKQSCAKLKFKKLTEGESQVVAWMNYNLTLSATEG-SVLKIYETVVWERLLIHIQNLISF 294 VG + PI+++ DP V+++ +FAV+EYNK+S + LKF+ + GE+QVV+ NY L ++A +G V K Y +VW++ + +NL SF Sbjct: 28 VGGWSPISNVTDPQVVEIGEFAVSEYNKRSESGLKFETVVSGETQVVSGTNYRLKVAANDGDGVSKNYLAIVWDKPWMKFRNLTSF 113
BLAST of Psat4g004040.1 vs. DB:Swiss
Match: CYT4_ARATH (Cysteine proteinase inhibitor 4 OS=Arabidopsis thaliana OX=3702 GN=CYS4 PE=3 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 2.091e-18 Identity = 38/85 (44.71%), Postives = 59/85 (69.41%), Query Frame = 1 Query: 52 RPITDINDPDVIKVVKFAVTEYNKQSCAKLKFKKLTEGESQVVAWMNYNLTLSATE-GSVLKIYETVVWERLLIHIQNLISFATL 303 +PI +++DPDV+ V K+A+ E+NK+S KL F K+ EG +QVV+ Y+L ++A + G +K YE VV E+L +H ++L SF L Sbjct: 33 KPIKNVSDPDVVAVAKYAIEEHNKESKEKLVFVKVVEGTTQVVSGTKYDLKIAAKDGGGKIKNYEAVVVEKLWLHSKSLESFKAL 117
BLAST of Psat4g004040.1 vs. DB:Swiss
Match: CYT8_ORYSJ (Cysteine proteinase inhibitor 8 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0429000 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 2.064e-14 Identity = 33/87 (37.93%), Postives = 52/87 (59.77%), Query Frame = 1 Query: 37 LVGCYRPITDINDPDVIKVVKFAVTEYNKQSCAKLKFKKLTEGESQVVAWMNYNLTLSATE-GSVLKIYETVVWERLLIHIQNLISF 294 LVG + PITD+ DP + ++ +AV + S L+F+++T GE QVV+ MNY L +SA++ Y VV+E+ + + L SF Sbjct: 31 LVGGWSPITDVGDPHIQELGGWAVERHASLSSDGLRFRRVTSGEQQVVSGMNYRLVVSASDPAGATASYVAVVYEQSWTNTRQLTSF 117
BLAST of Psat4g004040.1 vs. DB:Swiss
Match: CYT7_ORYSJ (Putative cysteine proteinase inhibitor 7 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0210100 PE=3 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 2.041e-13 Identity = 37/92 (40.22%), Postives = 59/92 (64.13%), Query Frame = 1 Query: 40 VGCYRPITDINDPDVIKVVKFAVTEYNKQ-SCAKLKFKKLTEGESQVVAWMNYNLTLSA-TEGSVLKIYETVVWER-LLIHIQNLISFATLH 306 VG + P+ DINDP V ++ ++AV E ++ + L F+++T+GE QVVA +NY LTL A + G+ YE VV+E+ + + L+SF +H Sbjct: 27 VGSWEPV-DINDPHVQELGRWAVAEEDRGVAAGGLTFERVTDGEKQVVAGVNYRLTLEASSSGAKDGRYEAVVYEQDPRSNARKLVSFEPIH 117
BLAST of Psat4g004040.1 vs. DB:Swiss
Match: CYT1_ORYSJ (Cysteine proteinase inhibitor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0803200 PE=1 SV=2) HSP 1 Score: 64.3142 bits (155), Expect = 3.163e-13 Identity = 32/91 (35.16%), Postives = 53/91 (58.24%), Query Frame = 1 Query: 37 LVGCYRPITDINDPDVIKVVKFAVTEYNKQSCAKLKFKKLTEGESQVVAWMNYNLTLSATEGSVLKIYETVVWERLLIHIQNLISFATLHA 309 ++G P+ + ND ++ + +FAVTE+NK++ + L+F+KL + QVVA Y T+ EG K+YE VWE+ + + L F + A Sbjct: 46 VLGGVEPVGNENDLHLVDLARFAVTEHNKKANSLLEFEKLVSVKQQVVAGTLYYFTIEVKEGDAKKLYEAKVWEKPWMDFKELQEFKPVDA 136
BLAST of Psat4g004040.1 vs. DB:Swiss
Match: CYT6_ORYSJ (Cysteine proteinase inhibitor 6 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0210200 PE=3 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 3.398e-12 Identity = 34/90 (37.78%), Postives = 54/90 (60.00%), Query Frame = 1 Query: 46 CYRPITDINDPDVIKVVKFAVTEYNKQSCA-KLKFKKLTEGESQVVAWMNYNLTLSATEGS--VLKIYETVVWERLLIHIQNLISFATLH 306 + PI +I+DP + ++ ++A+TE N+ S + +L F ++T GE QVV+ MNY L + A G V Y VV+E+ + + LISF H Sbjct: 22 GWSPIKNIDDPHIQELGRWAITENNRVSPSDELTFHRVTGGEQQVVSGMNYRLEIEAASGGGDVTGSYGAVVFEQEWSNTRKLISFDKNH 111
BLAST of Psat4g004040.1 vs. DB:Swiss
Match: CYT1_ARATH (Cysteine proteinase inhibitor 1 OS=Arabidopsis thaliana OX=3702 GN=CYS1 PE=1 SV=2) HSP 1 Score: 57.7658 bits (138), Expect = 4.089e-11 Identity = 33/91 (36.26%), Postives = 52/91 (57.14%), Query Frame = 1 Query: 37 LVGCYRPI-TDINDPDVIKVVKFAVTEYNKQSCAKLKFKKLTEGESQVVAWMNYNLTLSATEGSVLKIYETVVWERLLIHIQNLISFATLH 306 +VG R I + ND V + +FAV E+NK L++K+L ++QVVA ++LT+ +G K+YE V E+ +++ L SF LH Sbjct: 9 IVGGVRDIDANANDLQVESLARFAVDEHNKNENLTLEYKRLLGAKTQVVAGTMHHLTVEVADGETNKVYEAKVLEKAWENLKQLESFNHLH 99
BLAST of Psat4g004040.1 vs. DB:Swiss
Match: CYT1_MAIZE (Cystatin-1 OS=Zea mays OX=4577 GN=RAMDAZC7 PE=2 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 1.003e-10 Identity = 33/95 (34.74%), Postives = 54/95 (56.84%), Query Frame = 1 Query: 13 SAKDEEEYLVGCYRPI-TDINDPDVIKVVKFAVTEYNKQSCAKLKFKKLTEGESQVVAWMNYNLTLSATEGSVLKIYETVVWERLLIHIQNLISF 294 S D L G + + + ND + ++ +FAV E+N+++ A L F+KL + ++QVVA Y LT+ +G V K+YE VWE+ + + L F Sbjct: 32 SVADNAGMLAGGIKDVPANENDLQLQELARFAVNEHNQKANALLGFEKLVKAKTQVVAGTMYYLTIEVKDGEVKKLYEAKVWEKPWENFKQLQEF 126
BLAST of Psat4g004040.1 vs. DB:Swiss
Match: CYT1_HORVU (Cysteine proteinase inhibitor OS=Hordeum vulgare OX=4513 GN=ICY PE=1 SV=1) HSP 1 Score: 56.6102 bits (135), Expect = 1.657e-10 Identity = 29/80 (36.25%), Postives = 45/80 (56.25%), Query Frame = 1 Query: 55 PITDINDPDVIKVVKFAVTEYNKQSCAKLKFKKLTEGESQVVAWMNYNLTLSATEGSVLKIYETVVWERLLIHIQNLISF 294 P ND + I++ +FAV E+N ++ A L+F+KL + QVVA + T+ EG K+YE VWE+ + + L F Sbjct: 24 PAGRENDLETIELARFAVAEHNAKANALLEFEKLVKVRQQVVAGCMHYFTIEVKEGGAKKLYEAKVWEKAWENFKQLQEF 103 The following BLAST results are available for this feature:
BLAST of Psat4g004040.1 vs. DB:Swiss
Analysis Date: 2019-09-12 (BLAST: P. sativum Cameor genome v1a vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: P. sativum Cameor genome v1a
Date Performed: 2019-09-12
Sequences
The
following sequences are available for this feature:
mRNA sequence >Psat4g004040.1_Ps_Cameor_v1a ID=Psat4g004040.1_Ps_Cameor_v1a; Name=Psat4g004040.1; organism=Pisum sativum; type=mRNA; length=533bpback to top protein sequence of Psat4g004040.1_Ps_Cameor_v1a >Psat4g004040.1_Ps_Cameor_v1a ID=Psat4g004040.1_Ps_Cameor_v1a; Name=Psat4g004040.1_Ps_Cameor_v1a; organism=Pisum sativum; type=polypeptide; length=104bpback to top mRNA from alignment at chr4LG4:4434402..4434934- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Psat4g004040.1_Ps_Cameor_v1a ID=Psat4g004040.1_Ps_Cameor_v1a; Name=Psat4g004040.1; organism=Pisum sativum; type=mRNA; length=533bp; location=Sequence derived from: chr4LG4:4434402..4434934- (Pisum sativumback to top Coding sequence (CDS) from alignment at chr4LG4:4434402..4434934- >Psat4g004040.1_Ps_Cameor_v1a ID=Psat4g004040.1_Ps_Cameor_v1a; Name=Psat4g004040.1; organism=Pisum sativum; type=CDS; length=624bp; location=Sequence derived from: chr4LG4:4434402..4434934- (Pisum sativumback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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