Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
Feature Name Unique Name Species Type
Psat4g004040.1 Psat4g004040.1_Ps_Cameor_v1a-protein Pisum sativum polypeptide Psat4g004040.1_Ps_Cameor_v1a Psat4g004040.1_Ps_Cameor_v1a Pisum sativum polypeptide
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type
Psat4g004040.1.five_prime_utr1 Psat4g004040.1.five_prime_utr1_Ps_Cameor_v1a Pisum sativum five_prime_UTR
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type
Psat4g004040.1.cds1 Psat4g004040.1.cds1_Ps_Cameor_v1a Pisum sativum CDS
The following exon feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type
Psat4g004040.1.exon1 Psat4g004040.1.exon1_Ps_Cameor_v1a Pisum sativum exon
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type
Psat4g004040.1.three_prime_utr1 Psat4g004040.1.three_prime_utr1_Ps_Cameor_v1a Pisum sativum three_prime_UTR
Homology
BLAST of Psat4g004040.1 vs. DB:Swiss
Match:
CYT1_ACTDE (Cysteine proteinase inhibitor 1 OS=Actinidia deliciosa OX=3627 PE=1 SV=1)
HSP 1 Score: 82.4185 bits (202), Expect = 1.527e-20
Identity = 36/84 (42.86%), Postives = 58/84 (69.05%), Query Frame = 1
Query: 43 GCYRPITDINDPDVIKVVKFAVTEYNKQSCAKLKFKKLTEGESQVVAWMNYNLTLSATEGSVLKIYETVVWERLLIHIQNLISF 294
G +RPI +N +V V +FAV+E+NKQ+ +L+++ + G +QVVA NY L ++A +G+V+ YE VVW++ +H +NL SF
Sbjct: 30 GGWRPIESLNSAEVQDVAQFAVSEHNKQANDELQYQSVVRGYTQVVAGTNYRLVIAAKDGAVVGNYEAVVWDKPWMHFRNLTSF 113
BLAST of Psat4g004040.1 vs. DB:Swiss
Match:
CYT5_ARATH (Cysteine proteinase inhibitor 5 OS=Arabidopsis thaliana OX=3702 GN=CYS5 PE=2 SV=2)
HSP 1 Score: 80.8777 bits (198), Expect = 6.376e-20
Identity = 37/86 (43.02%), Postives = 60/86 (69.77%), Query Frame = 1
Query: 40 VGCYRPITDINDPDVIKVVKFAVTEYNKQSCAKLKFKKLTEGESQVVAWMNYNLTLSATEG-SVLKIYETVVWERLLIHIQNLISF 294
VG + PI+++ DP V+++ +FAV+EYNK+S + LKF+ + GE+QVV+ NY L ++A +G V K Y +VW++ + +NL SF
Sbjct: 28 VGGWSPISNVTDPQVVEIGEFAVSEYNKRSESGLKFETVVSGETQVVSGTNYRLKVAANDGDGVSKNYLAIVWDKPWMKFRNLTSF 113
BLAST of Psat4g004040.1 vs. DB:Swiss
Match:
CYT4_ARATH (Cysteine proteinase inhibitor 4 OS=Arabidopsis thaliana OX=3702 GN=CYS4 PE=3 SV=2)
HSP 1 Score: 77.0258 bits (188), Expect = 2.091e-18
Identity = 38/85 (44.71%), Postives = 59/85 (69.41%), Query Frame = 1
Query: 52 RPITDINDPDVIKVVKFAVTEYNKQSCAKLKFKKLTEGESQVVAWMNYNLTLSATE-GSVLKIYETVVWERLLIHIQNLISFATL 303
+PI +++DPDV+ V K+A+ E+NK+S KL F K+ EG +QVV+ Y+L ++A + G +K YE VV E+L +H ++L SF L
Sbjct: 33 KPIKNVSDPDVVAVAKYAIEEHNKESKEKLVFVKVVEGTTQVVSGTKYDLKIAAKDGGGKIKNYEAVVVEKLWLHSKSLESFKAL 117
BLAST of Psat4g004040.1 vs. DB:Swiss
Match:
CYT8_ORYSJ (Cysteine proteinase inhibitor 8 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0429000 PE=2 SV=1)
HSP 1 Score: 67.0106 bits (162), Expect = 2.064e-14
Identity = 33/87 (37.93%), Postives = 52/87 (59.77%), Query Frame = 1
Query: 37 LVGCYRPITDINDPDVIKVVKFAVTEYNKQSCAKLKFKKLTEGESQVVAWMNYNLTLSATE-GSVLKIYETVVWERLLIHIQNLISF 294
LVG + PITD+ DP + ++ +AV + S L+F+++T GE QVV+ MNY L +SA++ Y VV+E+ + + L SF
Sbjct: 31 LVGGWSPITDVGDPHIQELGGWAVERHASLSSDGLRFRRVTSGEQQVVSGMNYRLVVSASDPAGATASYVAVVYEQSWTNTRQLTSF 117
BLAST of Psat4g004040.1 vs. DB:Swiss
Match:
CYT7_ORYSJ (Putative cysteine proteinase inhibitor 7 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0210100 PE=3 SV=1)
HSP 1 Score: 64.3142 bits (155), Expect = 2.041e-13
Identity = 37/92 (40.22%), Postives = 59/92 (64.13%), Query Frame = 1
Query: 40 VGCYRPITDINDPDVIKVVKFAVTEYNKQ-SCAKLKFKKLTEGESQVVAWMNYNLTLSA-TEGSVLKIYETVVWER-LLIHIQNLISFATLH 306
VG + P+ DINDP V ++ ++AV E ++ + L F+++T+GE QVVA +NY LTL A + G+ YE VV+E+ + + L+SF +H
Sbjct: 27 VGSWEPV-DINDPHVQELGRWAVAEEDRGVAAGGLTFERVTDGEKQVVAGVNYRLTLEASSSGAKDGRYEAVVYEQDPRSNARKLVSFEPIH 117
BLAST of Psat4g004040.1 vs. DB:Swiss
Match:
CYT1_ORYSJ (Cysteine proteinase inhibitor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0803200 PE=1 SV=2)
HSP 1 Score: 64.3142 bits (155), Expect = 3.163e-13
Identity = 32/91 (35.16%), Postives = 53/91 (58.24%), Query Frame = 1
Query: 37 LVGCYRPITDINDPDVIKVVKFAVTEYNKQSCAKLKFKKLTEGESQVVAWMNYNLTLSATEGSVLKIYETVVWERLLIHIQNLISFATLHA 309
++G P+ + ND ++ + +FAVTE+NK++ + L+F+KL + QVVA Y T+ EG K+YE VWE+ + + L F + A
Sbjct: 46 VLGGVEPVGNENDLHLVDLARFAVTEHNKKANSLLEFEKLVSVKQQVVAGTLYYFTIEVKEGDAKKLYEAKVWEKPWMDFKELQEFKPVDA 136
BLAST of Psat4g004040.1 vs. DB:Swiss
Match:
CYT6_ORYSJ (Cysteine proteinase inhibitor 6 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0210200 PE=3 SV=1)
HSP 1 Score: 60.8474 bits (146), Expect = 3.398e-12
Identity = 34/90 (37.78%), Postives = 54/90 (60.00%), Query Frame = 1
Query: 46 CYRPITDINDPDVIKVVKFAVTEYNKQSCA-KLKFKKLTEGESQVVAWMNYNLTLSATEGS--VLKIYETVVWERLLIHIQNLISFATLH 306
+ PI +I+DP + ++ ++A+TE N+ S + +L F ++T GE QVV+ MNY L + A G V Y VV+E+ + + LISF H
Sbjct: 22 GWSPIKNIDDPHIQELGRWAITENNRVSPSDELTFHRVTGGEQQVVSGMNYRLEIEAASGGGDVTGSYGAVVFEQEWSNTRKLISFDKNH 111
BLAST of Psat4g004040.1 vs. DB:Swiss
Match:
CYT1_ARATH (Cysteine proteinase inhibitor 1 OS=Arabidopsis thaliana OX=3702 GN=CYS1 PE=1 SV=2)
HSP 1 Score: 57.7658 bits (138), Expect = 4.089e-11
Identity = 33/91 (36.26%), Postives = 52/91 (57.14%), Query Frame = 1
Query: 37 LVGCYRPI-TDINDPDVIKVVKFAVTEYNKQSCAKLKFKKLTEGESQVVAWMNYNLTLSATEGSVLKIYETVVWERLLIHIQNLISFATLH 306
+VG R I + ND V + +FAV E+NK L++K+L ++QVVA ++LT+ +G K+YE V E+ +++ L SF LH
Sbjct: 9 IVGGVRDIDANANDLQVESLARFAVDEHNKNENLTLEYKRLLGAKTQVVAGTMHHLTVEVADGETNKVYEAKVLEKAWENLKQLESFNHLH 99
BLAST of Psat4g004040.1 vs. DB:Swiss
Match:
CYT1_MAIZE (Cystatin-1 OS=Zea mays OX=4577 GN=RAMDAZC7 PE=2 SV=1)
HSP 1 Score: 57.7658 bits (138), Expect = 1.003e-10
Identity = 33/95 (34.74%), Postives = 54/95 (56.84%), Query Frame = 1
Query: 13 SAKDEEEYLVGCYRPI-TDINDPDVIKVVKFAVTEYNKQSCAKLKFKKLTEGESQVVAWMNYNLTLSATEGSVLKIYETVVWERLLIHIQNLISF 294
S D L G + + + ND + ++ +FAV E+N+++ A L F+KL + ++QVVA Y LT+ +G V K+YE VWE+ + + L F
Sbjct: 32 SVADNAGMLAGGIKDVPANENDLQLQELARFAVNEHNQKANALLGFEKLVKAKTQVVAGTMYYLTIEVKDGEVKKLYEAKVWEKPWENFKQLQEF 126
BLAST of Psat4g004040.1 vs. DB:Swiss
Match:
CYT1_HORVU (Cysteine proteinase inhibitor OS=Hordeum vulgare OX=4513 GN=ICY PE=1 SV=1)
HSP 1 Score: 56.6102 bits (135), Expect = 1.657e-10
Identity = 29/80 (36.25%), Postives = 45/80 (56.25%), Query Frame = 1
Query: 55 PITDINDPDVIKVVKFAVTEYNKQSCAKLKFKKLTEGESQVVAWMNYNLTLSATEGSVLKIYETVVWERLLIHIQNLISF 294
P ND + I++ +FAV E+N ++ A L+F+KL + QVVA + T+ EG K+YE VWE+ + + L F
Sbjct: 24 PAGRENDLETIELARFAVAEHNAKANALLEFEKLVKVRQQVVAGCMHYFTIEVKEGGAKKLYEAKVWEKAWENFKQLQEF 103
The following BLAST results are available for this feature:
BLAST of Psat4g004040.1 vs. DB:Swiss
Analysis Date: 2019-09-12 (
BLAST: P. sativum Cameor genome v1a vs. Swissprot )
Total hits: 10
50 100 150 200 250 300 350 400 450 500 Expect = 1.53e-20 / Id = 42.86 Expect = 6.38e-20 / Id = 43.02 Expect = 2.09e-18 / Id = 44.71 Expect = 2.06e-14 / Id = 37.93 Expect = 2.04e-13 / Id = 40.22 Expect = 3.16e-13 / Id = 35.16 Expect = 3.40e-12 / Id = 37.78 Expect = 4.09e-11 / Id = 36.26 Expect = 1.00e-10 / Id = 34.74 Expect = 1.66e-10 / Id = 36.25 Sequence CYT1_ACTDE CYT5_ARATH CYT4_ARATH CYT8_ORYSJ CYT7_ORYSJ CYT1_ORYSJ CYT6_ORYSJ CYT1_ARATH CYT1_MAIZE CYT1_HORVU
Match Name E-value Identity Description
CYT1_ACTDE 1.527e-20 42.86 Cysteine proteinase inhibitor 1 OS=Actinidia delic... [more] CYT5_ARATH 6.376e-20 43.02 Cysteine proteinase inhibitor 5 OS=Arabidopsis tha... [more] CYT4_ARATH 2.091e-18 44.71 Cysteine proteinase inhibitor 4 OS=Arabidopsis tha... [more] CYT8_ORYSJ 2.064e-14 37.93 Cysteine proteinase inhibitor 8 OS=Oryza sativa su... [more] CYT7_ORYSJ 2.041e-13 40.22 Putative cysteine proteinase inhibitor 7 OS=Oryza ... [more] CYT1_ORYSJ 3.163e-13 35.16 Cysteine proteinase inhibitor 1 OS=Oryza sativa su... [more] CYT6_ORYSJ 3.398e-12 37.78 Cysteine proteinase inhibitor 6 OS=Oryza sativa su... [more] CYT1_ARATH 4.089e-11 36.26 Cysteine proteinase inhibitor 1 OS=Arabidopsis tha... [more] CYT1_MAIZE 1.003e-10 34.74 Cystatin-1 OS=Zea mays OX=4577 GN=RAMDAZC7 PE=2 SV... [more] CYT1_HORVU 1.657e-10 36.25 Cysteine proteinase inhibitor OS=Hordeum vulgare O... [more]
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Sequences
The
following sequences are available for this feature:
mRNA sequence
>Psat4g004040.1_Ps_Cameor_v1a ID=Psat4g004040.1_Ps_Cameor_v1a; Name=Psat4g004040.1; organism=Pisum sativum; type=mRNA; length=533bp back to top protein sequence of Psat4g004040.1_Ps_Cameor_v1a
>Psat4g004040.1_Ps_Cameor_v1a ID=Psat4g004040.1_Ps_Cameor_v1a; Name=Psat4g004040.1_Ps_Cameor_v1a; organism=Pisum sativum; type=polypeptide; length=104bp back to top mRNA from alignment at chr4LG4:4434402..4434934-
Legend: five_prime_UTR exon polypeptide CDS three_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Psat4g004040.1_Ps_Cameor_v1a ID=Psat4g004040.1_Ps_Cameor_v1a; Name=Psat4g004040.1; organism=Pisum sativum; type=mRNA; length=533bp; location=Sequence derived from: chr4LG4:4434402..4434934- (Pisum sativumACTCCAAACCCTAATTCTTCTAAAGTTCTTTTA ATGGCCTCTATTTCTGC
AAAGGATGAGGAGGAGTATCTGGTGGGTTGTTATAGACCCATCACAGACA
TCAACGATCCTGATGTGATCAAAGTCGTAAAATTCGCTGTGACCGAATAC
AACAAGCAAAGTTGTGCCAAGTTGAAGTTTAAGAAGCTAACCGAAGGTGA
ATCTCAGGTTGTTGCATGGATGAACTACAACCTCACCCTCTCCGCCACCG
AAGGTTCCGTTTTGAAGATCTATGAAACTGTTGTGTGGGAGAGGCTATTG
ATCCACATCCAAAACCTCATTTCCTTTGCAACTTTACATGCTTAA ATTAT
TAAATGTTGCATAATTCCCCACTTATTGTTGTTATTATATCATTAAAAGT
ATATGTCTTTTTTTATAAGCAAATTTGTATTAAATTAAGAATACCAAGGG
TATTCAAACATTAAAAAAGAGGAAATACAAGAAATATCAATGGTTTCAAA
GTATAAAATAAATAAGTCAATGATTTACAAGAT back to top Coding sequence (CDS) from alignment at chr4LG4:4434402..4434934-
>Psat4g004040.1_Ps_Cameor_v1a ID=Psat4g004040.1_Ps_Cameor_v1a; Name=Psat4g004040.1; organism=Pisum sativum; type=CDS; length=624bp; location=Sequence derived from: chr4LG4:4434402..4434934- (Pisum sativum back to top
