Psat4g004160.1
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Psat4g004160.1 vs. DB:Swiss
Match: CYT5_ARATH (Cysteine proteinase inhibitor 5 OS=Arabidopsis thaliana OX=3702 GN=CYS5 PE=2 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 1.992e-32 Identity = 50/90 (55.56%), Postives = 72/90 (80.00%), Query Frame = 1
Query: 76 IGGYSPITNINDPHVIEIANFAVTQYDKRSGAKLEFKKVIKGESQVVAGTNYRLTLSAGEGS-VSKIYEAVVWEKLWLHSRNLTSFKPVH 342
+GG+SPI+N+ DP V+EI FAV++Y+KRS + L+F+ V+ GE+QVV+GTNYRL ++A +G VSK Y A+VW+K W+ RNLTSF+P +
Sbjct: 28 VGGWSPISNVTDPQVVEIGEFAVSEYNKRSESGLKFETVVSGETQVVSGTNYRLKVAANDGDGVSKNYLAIVWDKPWMKFRNLTSFEPAN 117
BLAST of Psat4g004160.1 vs. DB:Swiss
Match: CYT1_ACTDE (Cysteine proteinase inhibitor 1 OS=Actinidia deliciosa OX=3627 PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 5.136e-28 Identity = 45/94 (47.87%), Postives = 70/94 (74.47%), Query Frame = 1
Query: 58 ARKQYPIGGYSPITNINDPHVIEIANFAVTQYDKRSGAKLEFKKVIKGESQVVAGTNYRLTLSAGEGSVSKIYEAVVWEKLWLHSRNLTSFKPV 339
RK GG+ PI ++N V ++A FAV++++K++ +L+++ V++G +QVVAGTNYRL ++A +G+V YEAVVW+K W+H RNLTSF+ V
Sbjct: 23 GRKLVAAGGWRPIESLNSAEVQDVAQFAVSEHNKQANDELQYQSVVRGYTQVVAGTNYRLVIAAKDGAVVGNYEAVVWDKPWMHFRNLTSFRKV 116
BLAST of Psat4g004160.1 vs. DB:Swiss
Match: CYT1_ORYSJ (Cysteine proteinase inhibitor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0803200 PE=1 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 2.367e-25 Identity = 42/90 (46.67%), Postives = 62/90 (68.89%), Query Frame = 1
Query: 76 IGGYSPITNINDPHVIEIANFAVTQYDKRSGAKLEFKKVIKGESQVVAGTNYRLTLSAGEGSVSKIYEAVVWEKLWLHSRNLTSFKPVHA 345
+GG P+ N ND H++++A FAVT+++K++ + LEF+K++ + QVVAGT Y T+ EG K+YEA VWEK W+ + L FKPV A
Sbjct: 47 LGGVEPVGNENDLHLVDLARFAVTEHNKKANSLLEFEKLVSVKQQVVAGTLYYFTIEVKEGDAKKLYEAKVWEKPWMDFKELQEFKPVDA 136
BLAST of Psat4g004160.1 vs. DB:Swiss
Match: CYT8_ORYSJ (Cysteine proteinase inhibitor 8 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0429000 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.011e-23 Identity = 42/91 (46.15%), Postives = 61/91 (67.03%), Query Frame = 1
Query: 76 IGGYSPITNINDPHVIEIANFAVTQYDKRSGAKLEFKKVIKGESQVVAGTNYRLTLSAGE-GSVSKIYEAVVWEKLWLHSRNLTSFKPVHA 345
+GG+SPIT++ DPH+ E+ +AV ++ S L F++V GE QVV+G NYRL +SA + + Y AVV+E+ W ++R LTSFKP A
Sbjct: 32 VGGWSPITDVGDPHIQELGGWAVERHASLSSDGLRFRRVTSGEQQVVSGMNYRLVVSASDPAGATASYVAVVYEQSWTNTRQLTSFKPAAA 122
BLAST of Psat4g004160.1 vs. DB:Swiss
Match: CYT4_ARATH (Cysteine proteinase inhibitor 4 OS=Arabidopsis thaliana OX=3702 GN=CYS4 PE=3 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 4.596e-22 Identity = 42/82 (51.22%), Postives = 60/82 (73.17%), Query Frame = 1
Query: 91 PITNINDPHVIEIANFAVTQYDKRSGAKLEFKKVIKGESQVVAGTNYRLTLSAGEGSVS-KIYEAVVWEKLWLHSRNLTSFK 333
PI N++DP V+ +A +A+ +++K S KL F KV++G +QVV+GT Y L ++A +G K YEAVV EKLWLHS++L SFK
Sbjct: 34 PIKNVSDPDVVAVAKYAIEEHNKESKEKLVFVKVVEGTTQVVSGTKYDLKIAAKDGGGKIKNYEAVVVEKLWLHSKSLESFK 115
BLAST of Psat4g004160.1 vs. DB:Swiss
Match: CYT1_MAIZE (Cystatin-1 OS=Zea mays OX=4577 GN=RAMDAZC7 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 3.052e-20 Identity = 40/89 (44.94%), Postives = 59/89 (66.29%), Query Frame = 1
Query: 79 GGYSPI-TNINDPHVIEIANFAVTQYDKRSGAKLEFKKVIKGESQVVAGTNYRLTLSAGEGSVSKIYEAVVWEKLWLHSRNLTSFKPVH 342
GG + N ND + E+A FAV ++++++ A L F+K++K ++QVVAGT Y LT+ +G V K+YEA VWEK W + + L FKPV
Sbjct: 42 GGIKDVPANENDLQLQELARFAVNEHNQKANALLGFEKLVKAKTQVVAGTMYYLTIEVKDGEVKKLYEAKVWEKPWENFKQLQEFKPVE 130
BLAST of Psat4g004160.1 vs. DB:Swiss
Match: CYT6_ORYSJ (Cysteine proteinase inhibitor 6 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0210200 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.938e-19 Identity = 41/90 (45.56%), Postives = 60/90 (66.67%), Query Frame = 1
Query: 82 GYSPITNINDPHVIEIANFAVTQYDKRSGA-KLEFKKVIKGESQVVAGTNYRLTLSA--GEGSVSKIYEAVVWEKLWLHSRNLTSFKPVH 342
G+SPI NI+DPH+ E+ +A+T+ ++ S + +L F +V GE QVV+G NYRL + A G G V+ Y AVV+E+ W ++R L SF H
Sbjct: 22 GWSPIKNIDDPHIQELGRWAITENNRVSPSDELTFHRVTGGEQQVVSGMNYRLEIEAASGGGDVTGSYGAVVFEQEWSNTRKLISFDKNH 111
BLAST of Psat4g004160.1 vs. DB:Swiss
Match: CYT1_HORVU (Cysteine proteinase inhibitor OS=Hordeum vulgare OX=4513 GN=ICY PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 9.350e-19 Identity = 36/83 (43.37%), Postives = 51/83 (61.45%), Query Frame = 1
Query: 88 SPITNINDPHVIEIANFAVTQYDKRSGAKLEFKKVIKGESQVVAGTNYRLTLSAGEGSVSKIYEAVVWEKLWLHSRNLTSFKP 336
+P ND IE+A FAV +++ ++ A LEF+K++K QVVAG + T+ EG K+YEA VWEK W + + L FKP
Sbjct: 23 APAGRENDLETIELARFAVAEHNAKANALLEFEKLVKVRQQVVAGCMHYFTIEVKEGGAKKLYEAKVWEKAWENFKQLQEFKP 105
BLAST of Psat4g004160.1 vs. DB:Swiss
Match: CYTI_VIGUN (Cysteine proteinase inhibitor OS=Vigna unguiculata OX=3917 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 6.325e-18 Identity = 38/89 (42.70%), Postives = 55/89 (61.80%), Query Frame = 1
Query: 76 IGGYSPIT-NINDPHVIEIANFAVTQYDKRSGAKLEFKKVIKGESQVVAGTNYRLTLSAGEGSVSKIYEAVVWEKLWLHSRNLTSFKPV 339
+GG + N N + +A FAV +++K+ A LEF +V+ + QVV+GT Y +TL A +G K+YEA VWEK WL+ + L FK V
Sbjct: 4 LGGNRDVAGNQNSLEIDSLARFAVEEHNKKQNALLEFGRVVSAQQQVVSGTLYTITLEAKDGGQKKVYEAKVWEKPWLNFKELQEFKHV 92
BLAST of Psat4g004160.1 vs. DB:Swiss
Match: CYT7_ORYSJ (Putative cysteine proteinase inhibitor 7 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0210100 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.208e-17 Identity = 43/92 (46.74%), Postives = 60/92 (65.22%), Query Frame = 1
Query: 76 IGGYSPITNINDPHVIEIANFAVTQYDKRSGAK-LEFKKVIKGESQVVAGTNYRLTLSA-GEGSVSKIYEAVVWEK-LWLHSRNLTSFKPVH 342
+G + P+ +INDPHV E+ +AV + D+ A L F++V GE QVVAG NYRLTL A G+ YEAVV+E+ ++R L SF+P+H
Sbjct: 27 VGSWEPV-DINDPHVQELGRWAVAEEDRGVAAGGLTFERVTDGEKQVVAGVNYRLTLEASSSGAKDGRYEAVVYEQDPRSNARKLVSFEPIH 117 The following BLAST results are available for this feature:
BLAST of Psat4g004160.1 vs. DB:Swiss
Analysis Date: 2019-09-12 (BLAST: P. sativum Cameor genome v1a vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: P. sativum Cameor genome v1a
Date Performed: 2019-09-12
Sequences
The
following sequences are available for this feature:
mRNA sequence >Psat4g004160.1_Ps_Cameor_v1a ID=Psat4g004160.1_Ps_Cameor_v1a; Name=Psat4g004160.1; organism=Pisum sativum; type=mRNA; length=957bpback to top protein sequence of Psat4g004160.1_Ps_Cameor_v1a >Psat4g004160.1_Ps_Cameor_v1a ID=Psat4g004160.1_Ps_Cameor_v1a; Name=Psat4g004160.1_Ps_Cameor_v1a; organism=Pisum sativum; type=polypeptide; length=116bpback to top mRNA from alignment at chr4LG4:4464393..4465349- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Psat4g004160.1_Ps_Cameor_v1a ID=Psat4g004160.1_Ps_Cameor_v1a; Name=Psat4g004160.1; organism=Pisum sativum; type=mRNA; length=957bp; location=Sequence derived from: chr4LG4:4464393..4465349- (Pisum sativumback to top Coding sequence (CDS) from alignment at chr4LG4:4464393..4465349- >Psat4g004160.1_Ps_Cameor_v1a ID=Psat4g004160.1_Ps_Cameor_v1a; Name=Psat4g004160.1; organism=Pisum sativum; type=CDS; length=696bp; location=Sequence derived from: chr4LG4:4464393..4465349- (Pisum sativumback to top |