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Transcript Overview
| Name | Psat4g004280.1 |
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| Unique Name | Psat4g004280.1_Ps_Cameor_v1a |
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| Type | mRNA |
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| Organism | Pisum sativum (pea) |
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| Sequence length | 3211 |
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks
Orthologs
Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Psat4g004280.1_Ps_Cameor_v1a | Psat4g004280.1_Ps_Cameor_v1a | Pisum sativum | polypeptide |
| Psat4g004280.1 | Psat4g004280.1_Ps_Cameor_v1a-protein | Pisum sativum | polypeptide |
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Psat4g004280.1.exon1 | Psat4g004280.1.exon1_Ps_Cameor_v1a | Pisum sativum | exon |
| Psat4g004280.1.exon2 | Psat4g004280.1.exon2_Ps_Cameor_v1a | Pisum sativum | exon |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Psat4g004280.1.cds1 | Psat4g004280.1.cds1_Ps_Cameor_v1a | Pisum sativum | CDS |
| Psat4g004280.1.cds2 | Psat4g004280.1.cds2_Ps_Cameor_v1a | Pisum sativum | CDS |
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Psat4g004280.1.three_prime_utr1 | Psat4g004280.1.three_prime_utr1_Ps_Cameor_v1a | Pisum sativum | three_prime_UTR |
Homology
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan: P. sativum Cameor genome v1a
Date Performed: 2019-09-12
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 83..103 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 83..99 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 121..187 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 121..155 |
Sequences
The
following sequences are available for this feature:
mRNA sequence >Psat4g004280.1_Ps_Cameor_v1a ID=Psat4g004280.1_Ps_Cameor_v1a; Name=Psat4g004280.1; organism=Pisum sativum; type=mRNA; length=3211bp
ATGGAGTGGCAAGAAGCTCTTCTTGGTGATAGATCAATGAAGCATGTTAG
GTTTTGGGGAAACTTGGAGATGTTTGCACACTTAGTAACATTAGGCATCA
TCTTTATAGATCAATTATACTTGGTTCAAAATGTAGAGAAATCTTTTCCA
AATGTACAAAAGCAATGTAAATTGAATTATACCATGTAACATTTGAGCTT
CATTATGATGTATGATGTATCTACTTGCAATATTTAAAGACAATTTGAAA
TGAGAATGAGAATGCATTAATTTGAAATTCAAAATTTAGATTTTGAAATT
TATTTACTTGAGTATGAGTTTGGAATTAGAATTGTTTTAGCAATAAGATC
CCAAAACAAATGATATGCAATTAAAAAAAGGATGATTACGAAATGACTCA
TTGAGAGTGTATGTATGGATCAAACTTATGTGACTTCAATCATTGAAAAT
TTCAAATAATACTTCAAGTGAAAGCCCATAAGTTTTAAATCAATGAGCAC
CTAATGAAATGCAAATACACATGAAGCCACATATGCTTGGGAATTGGACG
TATGATCTAAAATGCAAATGATCAGATGATTGAGTTAAATTATTGACTTT
TACTTTATTGATTTTGACTAATGCATGCTAATGAGACTTAATGACCAAAT
GTAATTGTCATAAGATAATGATGTAGATGAATTATATGCAAATAAAAAAA
TCTTAGGGGTAAAATTTAGGGTATGACAATATGAAGAACTTGAAATATGC
CCTAGCTAATTGTCACATAGATTGGATTTTGCGGTAGAGGTGAAGAGGGA
GAAATCACCAAGATAGGGTCATCATCTACCGTATGAGGAGGAAGAGCCTT
CCTCTAGAGATCGAGATCATTGATTATTGTAATGGTCGGAGCGACGACGT
TACATTGAACGGCTCATCAAGTAGGTCTTGATGTCGTCGTTGTTTCACGT
GTTTTATTGGTATCAAACGAGAAAGAGACAATGATTTTTCGTGGAACTTT
GTAGGAATCAAATGTCAGATAACCACAGACAACACCAGTATTACGTTCAA
GAACCAAAACTAGTTCATGATAAACTGAGGTAAAGTTCAGGTACGGTGGA
GTATGCTTTCGACGCGGTAGAATGGGGTGGAGCTGCAAGGTTAACACTAT
AACGCTCAAGTCTATGAATGAATGAGAAGTAGTTTGAGTGTGAGAATAAA
TAGAATACTTGGATCTGACACATGCAAAGCTTTATATAGTTTAGGTGGTT
AAAATTGCTTTCGCTTAATCTGACGCTTCGCGTGGATTACTGTCCGATTA
AATCTAACAGTAAAAAATTGACACAAGATAGAAATTATGTGTTTCATGTT
TAAGCGAGACGACGCTTGTTTCATGCACCTCTCCTCGTAATGCTTGCAAT
TAGGCTTTGATGAATGGGCCTTGAGAGCGGCCCATAACCTATCTCAGAAC
TAATAAATAAATAAAATAAATAATAAATATTTGAGACATAATAATATGGA
AGTATGATTTAATAATTAAATATATCAACTACTCATTCTTTAAATTCGAT
AATCCAACTTTTTTATTTATGTAATGCTTTGTAATGCCAATCGTTACACC
CCTTCGAAACTACTTACCATTCTATCATAATTAATAAATAACTACTATAA
ATAATAATAAAATATTTGACCACATTCTAATATAGAAATATAATTAATAT
TTCAACAATTTAGTCATTGAATTTGACAATGATAATCCAACCTTTTCTGT
TAGTTTGTTACCTATATATAATAGCATTATTCTCAAAAACTTTTTGCAAT
TATTTCAACCTTCATTCCATGGACACCAAAAGCTCAAAAACACACTCACC
ATTATTATCACCAACTTCAAATAGAAGCCCAAAAAGAAAAAGCAATAATG
CATGCAGTTCACCAGAATTTGAATTCTGGATGCTAAGAAATCCCTCTTTA
CCACAACCCAACATCCTTTCCGCCGATCAACTCTTCCTCGACGGTGTCAT
CCTTCCCCTCCATCTCATATCCAACAAACCCGACCCGAAACCCGACTCTG
ATCAGTTACCCGACTCATCTCCTGCCATAACTGATTATTCAACCATCAGC
ACTATATCTAAACGATGGAAAAATATCTTCAGTAAGAAAAACAACAACAA
TACAGAGGAGAAAGTGAAGAAGAAAGAGAAGAAACATGGAAAAGGTGGTT
GTGGCGGTGACTCTTCTTCGTCTGAACTTTACATCAATATATGGCCTTTC
TCTCGGAGTAAGTCAGCCAAAAACTCTGTCACTCGACCTAAATCAGCTCC
GGTTTCCCGGAAAGTAAACAGTGCGCCGTGCTCTAGAAGCAATTCCGCCG
GAGATTCAAAGTCGAGGAAGTTTCCCAGTAGTCCAGGTCGTGTGGGAGTC
CATATAGGGAGGAGCAGCCCCGTTTGGCGCCGTGGAGGCTCCATTGGCAA
GAACATAGAGCCACTGAATATGAAAACTGATAAGTCCAAAAGAGAAACTC
CCACGGGTCACCGGAGAAAGGTCGTTGCAGCCGCCGGTGGTGGTGGTGGT
GGTAATGCCAAAGCACAGATTTTGAATTTGAATGTTCCGGTGTGTGTTGG
GTACAGTCATAGGTTGGGCTGCAGAACCGAGGAGAGCAGTGGTAGTAATA
AGCTTTTTAACCTGCGCAACTTCTTCATGAAGAAAACAGTTATAACGGTG
TGAGTTTTTGTTTTTATTTTTCAGTGATGTAATAAAATATTACTAGTACT
AGTGAGTGAGAGATTTTTTTTTCTCTATGAGCAAGTTTACTATCAGTGTG
GGTTATTGCTAATGAAATTATTTTTCATTTTTTGTATGTTTTTTCTTTTT
GTAAAAATATAAATTAAGGGAAGTGTCAAGTATGTAATTTTCTTAGTGTG
TTTTTGTATGTTGCTCTATGAATTAGGTTTTGGAAGATGTAAATTAAGAA
GTCTGATAAAAAAATGCATGGTTTTATTTAAGTATGCAGGCATAAATTTA
AATTTGAATATCATTTTTCAAAATTCTGATACATTAGTCTAATTTAAAGT
TTATTTGATATGAATGTATTATAAACTTAAATTTGAATATAATTTTTTCA
AAAATTAAAATTTATTTCGTATTAATGTATTGAAATAAGTTGTGAGACTT
ACTAATGAGATTAAATTCAATTTTGATATTTAGAAGTACACTTTAAAGAA
TCTTATTATAT back to topprotein sequence of Psat4g004280.1_Ps_Cameor_v1a >Psat4g004280.1_Ps_Cameor_v1a ID=Psat4g004280.1_Ps_Cameor_v1a; Name=Psat4g004280.1_Ps_Cameor_v1a; organism=Pisum sativum; type=polypeptide; length=267bp
MEWQEALLGDRSMKHVRFWGNLEMFAHLVTLGIIFIDQLYLVQNVEKSFP
NLPDSSPAITDYSTISTISKRWKNIFSKKNNNNTEEKVKKKEKKHGKGGC
GGDSSSSELYINIWPFSRSKSAKNSVTRPKSAPVSRKVNSAPCSRSNSAG
DSKSRKFPSSPGRVGVHIGRSSPVWRRGGSIGKNIEPLNMKTDKSKRETP
TGHRRKVVAAAGGGGGGNAKAQILNLNVPVCVGYSHRLGCRTEESSGSNK
LFNLRNFFMKKTVITV* back to topmRNA from alignment at chr4LG4:4592990..4596200- Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >Psat4g004280.1_Ps_Cameor_v1a ID=Psat4g004280.1_Ps_Cameor_v1a; Name=Psat4g004280.1; organism=Pisum sativum; type=mRNA; length=3211bp; location=Sequence derived from: chr4LG4:4592990..4596200- (Pisum sativum
ATGGAGTGGCAAGAAGCTCTTCTTGGTGATAGATCAATGAAGCATGTTAG
GTTTTGGGGAAACTTGGAGATGTTTGCACACTTAGTAACATTAGGCATCA
TCTTTATAGATCAATTATACTTGGTTCAAAATGTAGAGAAATCTTTTCCA
AATGTACAAAAGCAATGTAAATTGAATTATACCATGTAACATTTGAGCTT
CATTATGATGTATGATGTATCTACTTGCAATATTTAAAGACAATTTGAAA
TGAGAATGAGAATGCATTAATTTGAAATTCAAAATTTAGATTTTGAAATT
TATTTACTTGAGTATGAGTTTGGAATTAGAATTGTTTTAGCAATAAGATC
CCAAAACAAATGATATGCAATTAAAAAAAGGATGATTACGAAATGACTCA
TTGAGAGTGTATGTATGGATCAAACTTATGTGACTTCAATCATTGAAAAT
TTCAAATAATACTTCAAGTGAAAGCCCATAAGTTTTAAATCAATGAGCAC
CTAATGAAATGCAAATACACATGAAGCCACATATGCTTGGGAATTGGACG
TATGATCTAAAATGCAAATGATCAGATGATTGAGTTAAATTATTGACTTT
TACTTTATTGATTTTGACTAATGCATGCTAATGAGACTTAATGACCAAAT
GTAATTGTCATAAGATAATGATGTAGATGAATTATATGCAAATAAAAAAA
TCTTAGGGGTAAAATTTAGGGTATGACAATATGAAGAACTTGAAATATGC
CCTAGCTAATTGTCACATAGATTGGATTTTGCGGTAGAGGTGAAGAGGGA
GAAATCACCAAGATAGGGTCATCATCTACCGTATGAGGAGGAAGAGCCTT
CCTCTAGAGATCGAGATCATTGATTATTGTAATGGTCGGAGCGACGACGT
TACATTGAACGGCTCATCAAGTAGGTCTTGATGTCGTCGTTGTTTCACGT
GTTTTATTGGTATCAAACGAGAAAGAGACAATGATTTTTCGTGGAACTTT
GTAGGAATCAAATGTCAGATAACCACAGACAACACCAGTATTACGTTCAA
GAACCAAAACTAGTTCATGATAAACTGAGGTAAAGTTCAGGTACGGTGGA
GTATGCTTTCGACGCGGTAGAATGGGGTGGAGCTGCAAGGTTAACACTAT
AACGCTCAAGTCTATGAATGAATGAGAAGTAGTTTGAGTGTGAGAATAAA
TAGAATACTTGGATCTGACACATGCAAAGCTTTATATAGTTTAGGTGGTT
AAAATTGCTTTCGCTTAATCTGACGCTTCGCGTGGATTACTGTCCGATTA
AATCTAACAGTAAAAAATTGACACAAGATAGAAATTATGTGTTTCATGTT
TAAGCGAGACGACGCTTGTTTCATGCACCTCTCCTCGTAATGCTTGCAAT
TAGGCTTTGATGAATGGGCCTTGAGAGCGGCCCATAACCTATCTCAGAAC
TAATAAATAAATAAAATAAATAATAAATATTTGAGACATAATAATATGGA
AGTATGATTTAATAATTAAATATATCAACTACTCATTCTTTAAATTCGAT
AATCCAACTTTTTTATTTATGTAATGCTTTGTAATGCCAATCGTTACACC
CCTTCGAAACTACTTACCATTCTATCATAATTAATAAATAACTACTATAA
ATAATAATAAAATATTTGACCACATTCTAATATAGAAATATAATTAATAT
TTCAACAATTTAGTCATTGAATTTGACAATGATAATCCAACCTTTTCTGT
TAGTTTGTTACCTATATATAATAGCATTATTCTCAAAAACTTTTTGCAAT
TATTTCAACCTTCATTCCATGGACACCAAAAGCTCAAAAACACACTCACC
ATTATTATCACCAACTTCAAATAGAAGCCCAAAAAGAAAAAGCAATAATG
CATGCAGTTCACCAGAATTTGAATTCTGGATGCTAAGAAATCCCTCTTTA
CCACAACCCAACATCCTTTCCGCCGATCAACTCTTCCTCGACGGTGTCAT
CCTTCCCCTCCATCTCATATCCAACAAACCCGACCCGAAACCCGACTCTG
ATCAGTTACCCGACTCATCTCCTGCCATAACTGATTATTCAACCATCAGC
ACTATATCTAAACGATGGAAAAATATCTTCAGTAAGAAAAACAACAACAA
TACAGAGGAGAAAGTGAAGAAGAAAGAGAAGAAACATGGAAAAGGTGGTT
GTGGCGGTGACTCTTCTTCGTCTGAACTTTACATCAATATATGGCCTTTC
TCTCGGAGTAAGTCAGCCAAAAACTCTGTCACTCGACCTAAATCAGCTCC
GGTTTCCCGGAAAGTAAACAGTGCGCCGTGCTCTAGAAGCAATTCCGCCG
GAGATTCAAAGTCGAGGAAGTTTCCCAGTAGTCCAGGTCGTGTGGGAGTC
CATATAGGGAGGAGCAGCCCCGTTTGGCGCCGTGGAGGCTCCATTGGCAA
GAACATAGAGCCACTGAATATGAAAACTGATAAGTCCAAAAGAGAAACTC
CCACGGGTCACCGGAGAAAGGTCGTTGCAGCCGCCGGTGGTGGTGGTGGT
GGTAATGCCAAAGCACAGATTTTGAATTTGAATGTTCCGGTGTGTGTTGG
GTACAGTCATAGGTTGGGCTGCAGAACCGAGGAGAGCAGTGGTAGTAATA
AGCTTTTTAACCTGCGCAACTTCTTCATGAAGAAAACAGTTATAACGGTG
TGAGTTTTTGTTTTTATTTTTCAGTGATGTAATAAAATATTACTAGTACT
AGTGAGTGAGAGATTTTTTTTTCTCTATGAGCAAGTTTACTATCAGTGTG
GGTTATTGCTAATGAAATTATTTTTCATTTTTTGTATGTTTTTTCTTTTT
GTAAAAATATAAATTAAGGGAAGTGTCAAGTATGTAATTTTCTTAGTGTG
TTTTTGTATGTTGCTCTATGAATTAGGTTTTGGAAGATGTAAATTAAGAA
GTCTGATAAAAAAATGCATGGTTTTATTTAAGTATGCAGGCATAAATTTA
AATTTGAATATCATTTTTCAAAATTCTGATACATTAGTCTAATTTAAAGT
TTATTTGATATGAATGTATTATAAACTTAAATTTGAATATAATTTTTTCA
AAAATTAAAATTTATTTCGTATTAATGTATTGAAATAAGTTGTGAGACTT
ACTAATGAGATTAAATTCAATTTTGATATTTAGAAGTACACTTTAAAGAA
TCTTATTATAT back to topCoding sequence (CDS) from alignment at chr4LG4:4592990..4596200- >Psat4g004280.1_Ps_Cameor_v1a ID=Psat4g004280.1_Ps_Cameor_v1a; Name=Psat4g004280.1; organism=Pisum sativum; type=CDS; length=1602bp; location=Sequence derived from: chr4LG4:4592990..4596200- (Pisum sativum
ATGGAGTGGCAAGAAGCTCTTCTTGGTGATAGATCAATGAAGCATGTTAG
GTTTTGGGGAAACTTGGAGATGTTTGCACACTTAGTAACATTAGGCATCA
TCTTTATAGATCAATTATACTTGGTTCAAAATGTAGAGAAATCTTTTCCA
AATATGGAGTGGCAAGAAGCTCTTCTTGGTGATAGATCAATGAAGCATGT
TAGGTTTTGGGGAAACTTGGAGATGTTTGCACACTTAGTAACATTAGGCA
TCATCTTTATAGATCAATTATACTTGGTTCAAAATGTAGAGAAATCTTTT
CCAAATTTACCCGACTCATCTCCTGCCATAACTGATTATTCAACCATCAG
CACTATATCTAAACGATGGAAAAATATCTTCAGTAAGAAAAACAACAACA
ATACAGAGGAGAAAGTGAAGAAGAAAGAGAAGAAACATGGAAAAGGTGGT
TGTGGCGGTGACTCTTCTTCGTCTGAACTTTACATCAATATATGGCCTTT
CTCTCGGAGTAAGTCAGCCAAAAACTCTGTCACTCGACCTAAATCAGCTC
CGGTTTCCCGGAAAGTAAACAGTGCGCCGTGCTCTAGAAGCAATTCCGCC
GGAGATTCAAAGTCGAGGAAGTTTCCCAGTAGTCCAGGTCGTGTGGGAGT
CCATATAGGGAGGAGCAGCCCCGTTTGGCGCCGTGGAGGCTCCATTGGCA
AGAACATAGAGCCACTGAATATGAAAACTGATAAGTCCAAAAGAGAAACT
CCCACGGGTCACCGGAGAAAGGTCGTTGCAGCCGCCGGTGGTGGTGGTGG
TGGTAATGCCAAAGCACAGATTTTGAATTTGAATGTTCCGGTGTGTGTTG
GGTACAGTCATAGGTTGGGCTGCAGAACCGAGGAGAGCAGTGGTAGTAAT
AAGCTTTTTAACCTGCGCAACTTCTTCATGAAGAAAACAGTTATAACGGT
GTGATTACCCGACTCATCTCCTGCCATAACTGATTATTCAACCATCAGCA
CTATATCTAAACGATGGAAAAATATCTTCAGTAAGAAAAACAACAACAAT
ACAGAGGAGAAAGTGAAGAAGAAAGAGAAGAAACATGGAAAAGGTGGTTG
TGGCGGTGACTCTTCTTCGTCTGAACTTTACATCAATATATGGCCTTTCT
CTCGGAGTAAGTCAGCCAAAAACTCTGTCACTCGACCTAAATCAGCTCCG
GTTTCCCGGAAAGTAAACAGTGCGCCGTGCTCTAGAAGCAATTCCGCCGG
AGATTCAAAGTCGAGGAAGTTTCCCAGTAGTCCAGGTCGTGTGGGAGTCC
ATATAGGGAGGAGCAGCCCCGTTTGGCGCCGTGGAGGCTCCATTGGCAAG
AACATAGAGCCACTGAATATGAAAACTGATAAGTCCAAAAGAGAAACTCC
CACGGGTCACCGGAGAAAGGTCGTTGCAGCCGCCGGTGGTGGTGGTGGTG
GTAATGCCAAAGCACAGATTTTGAATTTGAATGTTCCGGTGTGTGTTGGG
TACAGTCATAGGTTGGGCTGCAGAACCGAGGAGAGCAGTGGTAGTAATAA
GCTTTTTAACCTGCGCAACTTCTTCATGAAGAAAACAGTTATAACGGTGT
GA back to top
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