Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
Feature Name Unique Name Species Type
Psat4g004960.1 Psat4g004960.1_Ps_Cameor_v1a-protein Pisum sativum polypeptide
Psat4g004960.1_Ps_Cameor_v1a Psat4g004960.1_Ps_Cameor_v1a Pisum sativum polypeptide
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type
Psat4g004960.1.five_prime_utr1 Psat4g004960.1.five_prime_utr1_Ps_Cameor_v1a Pisum sativum five_prime_UTR
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type
Psat4g004960.1.cds1 Psat4g004960.1.cds1_Ps_Cameor_v1a Pisum sativum CDS
The following exon feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type
Psat4g004960.1.exon1 Psat4g004960.1.exon1_Ps_Cameor_v1a Pisum sativum exon
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type
Psat4g004960.1.three_prime_utr1 Psat4g004960.1.three_prime_utr1_Ps_Cameor_v1a Pisum sativum three_prime_UTR
Homology
BLAST of Psat4g004960.1 vs. DB:Swiss
Match:
RRP1B_MOUSE (Ribosomal RNA processing protein 1 homolog B OS=Mus musculus OX=10090 GN=Rrp1b PE=1 SV=2)
HSP 1 Score: 114.005 bits (284), Expect = 2.758e-25
Identity = 71/212 (33.49%), Postives = 122/212 (57.55%), Query Frame = 1
Query: 43 KQLAISQKSSREKALRLLLKSWLPSQSQP----LPDEDAKKLWKGLFYCVWHSDKPLVQAEXXXXXXXXXXXXHPSFSVQYF--STFFITMRREWSGIDALRLDKFYLLIRRFVSKTFSLINMNSWDLEFVKVIMNCLDDATFGSKDKLLQGNGVNYHVASIFLDELTPFLPVK--EDVLEVLFKPFFAVMGKLPDKVLLGKIKSGLFDVLL 654
++LA S+K R++A+R L + +L +++Q E+ K+WKGLFYC+W D+PL+Q EL + +S L+ +++ S QY TF+ TM REW GID L+LDK+Y+LIR + ++F ++ N+W+ + + ++ L + + NGV H+ ++L+ELT + D L PF + K D L+ + G+F+V++
Sbjct: 14 QRLASSEKGVRDRAVRKL-RQYLSARTQSDTGSFSQEELLKIWKGLFYCMWVQDEPLLQEELANIISQLIHVVN-SLEAQYLFIQTFWQTMNREWQGIDKLQLDKYYMLIRLVLRQSFEVLKRNAWEESQITLFLDILMKEILSPESQ--SPNGVRTHLIDVYLEELTTVGGAELLADQNLKLIDPFCRIAAKTKDHTLVQTVARGVFEVIV 221
BLAST of Psat4g004960.1 vs. DB:Swiss
Match:
RRP1B_HUMAN (Ribosomal RNA processing protein 1 homolog B OS=Homo sapiens OX=9606 GN=RRP1B PE=1 SV=3)
HSP 1 Score: 113.62 bits (283), Expect = 4.525e-25
Identity = 72/212 (33.96%), Postives = 122/212 (57.55%), Query Frame = 1
Query: 43 KQLAISQKSSREKALRLLLKSWLPSQSQ----PLPDEDAKKLWKGLFYCVWHSDKPLVQAEXXXXXXXXXXXXHPSFSVQYF-STFFITMRREWSGIDALRLDKFYLLIRRFVSKTFSLINMNSWDLEFVKVIMNCLDDATFGSKDKLLQGNGVNYHVASIFLDELTPFLPVKEDVLEVLFK---PFFAVMGKLPDKVLLGKIKSGLFDVLL 654
++LA S+K R++A++ L + ++ ++Q E+ K+WKGLFYC+W D+PL+Q EL + ++ L+ ++ S + F TF+ TM REW GID LRLDK+Y+LIR + ++F ++ N W+ +KV ++ L + + NGV +H I+LDEL+ + KE + + K PF + K D L+ I G+F+ ++
Sbjct: 14 QRLASSEKGIRDRAVKKL-RQYISVKTQRETGGFSQEELLKIWKGLFYCMWVQDEPLLQEELANTIAQLVHAVNNSAAQHLFIQTFWQTMNREWKGIDRLRLDKYYMLIRLVLRQSFEVLKRNGWEESRIKVFLDVLMKEVLCPESQ--SPNGVRFHFIDIYLDELS-KVGGKELLADQNLKFIDPFCKIAAKTKDHTLVQTIARGVFEAIV 221
BLAST of Psat4g004960.1 vs. DB:Swiss
Match:
RRP1_SCHPO (Ribosomal RNA-processing protein 1 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC9B6.07 PE=3 SV=1)
HSP 1 Score: 102.064 bits (253), Expect = 2.108e-23
Identity = 73/175 (41.71%), Postives = 102/175 (58.29%), Query Frame = 1
Query: 40 IKQLAISQKSSREKALRLLLKSWLPSQSQPLPDEDAKKLWKGLFYCVWHSDKPLVQAEXXXXXXXXXXXXHPSFSVQYFSTFFITMRREWSGIDALRLDKFYLLIRRFVSKTFSLINMNSWDLEFVKVIM---NCLDDATFGSKDKLLQGNGVNYHVASIFLDELTPFLPVKEDV 555
IK+LA + + +R+KAL L + SQ + D KLWKGLFYC+W +DKPL Q +L D L++L+ I+ + + STF+ TM REW+GID LR DKFYLL+RRF + F I S KV+ D F +++ L NG+ +H+A I+ +EL P EDV
Sbjct: 8 IKKLAANDRKTRDKALESLQR--FLSQKKKFERLDFLKLWKGLFYCMWMADKPLYQQKLSDNLAALVPIVWIDNRILFQSTFWETMGREWTGIDILRTDKFYLLMRRFCAAAFRDIQTRSKTALLDKVVAEYNQMWMDGPFNTEN-LAFPNGILFHLADIWTEELRKVYP--EDV 177
BLAST of Psat4g004960.1 vs. DB:Swiss
Match:
RRP1_HUMAN (Ribosomal RNA processing protein 1 homolog A OS=Homo sapiens OX=9606 GN=RRP1 PE=1 SV=1)
HSP 1 Score: 100.523 bits (249), Expect = 2.368e-21
Identity = 66/214 (30.84%), Postives = 116/214 (54.21%), Query Frame = 1
Query: 34 SIIKQLAISQKSSREKALRLLLKSWLPSQSQP----LPDEDAKKLWKGLFYCVWHSDKPLVQAEXXXXXXXXXXXXHPSFSVQYF-STFFITMRREWSGIDALRLDKFYLLIRRFVSKTFSLINMNSWDLEFVKVIMNCLDDATFGSKDKLLQGNGVNYHVASIFLDELTPF--LPVKEDVLEVLFKPFFAVMGKLPDKVLLGKIKSGLFDVLL 654
+ ++LA +++ +R++A+R L K ++ +++Q ++ K+WKGLFYC+W DKPL+Q EL +S L+ + + F F+ TM REW+GID LRLDKFY+L+R ++++ ++ M W+ ++ ++ L + NGV H IFL+ELT + D PF + + D ++L I G+F+ ++
Sbjct: 12 QLAQRLAGNEQVTRDRAVRKLRK-YIVARTQRAAGGFTHDELLKVWKGLFYCMWMQDKPLLQEELGRTISQLVHAFQTTEAQHLFLQAFWQTMNREWTGIDRLRLDKFYMLMRMVLNESLKVLKMQGWEERQIEELLELLMTEILHPSSQA--PNGVKSHFIEIFLEELTKVGAEELTADQNLKFIDPFCRIAARTKDSLVLNNITRGIFETIV 222
BLAST of Psat4g004960.1 vs. DB:Swiss
Match:
RRP1_MOUSE (Ribosomal RNA processing protein 1 homolog A OS=Mus musculus OX=10090 GN=Rrp1 PE=1 SV=2)
HSP 1 Score: 100.523 bits (249), Expect = 3.173e-21
Identity = 71/222 (31.98%), Postives = 115/222 (51.80%), Query Frame = 1
Query: 37 IIKQLAISQKSSREKALRLLLKSWLPSQSQP-----LPDEDAKKLWKGLFYCVWHSDKPLVQAEXXXXXXXXXXXXHPSFSV-QYFSTFFITMRREWSGIDALRLDKFYLLIRRFVSKTFSLINMNSWDLEFVKVIMNCLDDATFGSKDKLLQGNGVNYHVASIFLDELTPFLPVKEDVLEVL--FKPFFAVMGKLPDKVLLGKIKSGLFDVLLRNGKRLLE 678
+ ++LA +++ +R++ALR L K ++ ++SQ PDE K+WKGLFYC+W DKPL Q EL ++ L+ H + + Q+ F+ TM REW GID LRLDKFY+L+R +S++ + WD ++ ++ L + +GV H IFL+EL + + L PF + + D +L KI +F ++ +E
Sbjct: 13 LAQRLAGNEQVTRDRALRKLRK-YIEARSQRATGGFTPDE-LLKVWKGLFYCMWMQDKPLQQEELGRTIAQLVHAFHTTEAQHQFLKAFWQTMIREWVGIDRLRLDKFYMLMRMVLSESLKAVKARGWDERQIEQLLELLTTEILNPDSQAP--SGVKSHFLEIFLEELAKVGAAELTADQNLQFIDPFCQIAARTKDSQVLHKIIQSIFQTIVEQAPLAIE 230
BLAST of Psat4g004960.1 vs. DB:Swiss
Match:
RRP1L_DROME (Ribosomal RNA processing protein 1 homolog OS=Drosophila melanogaster OX=7227 GN=Nnp-1 PE=1 SV=1)
HSP 1 Score: 91.2781 bits (225), Expect = 5.524e-18
Identity = 60/213 (28.17%), Postives = 108/213 (50.70%), Query Frame = 1
Query: 37 IIKQLAISQKSSREKALRLLLKSWLPSQ---SQPLPDEDAKKLWKGLFYCVWHSDKPLVQAEXXXXXXXXXXX--XHPSFSVQYFSTFFITMRREWSGIDALRLDKFYLLIRRFVSKTFSLINMNSWDLEFVKVIMNCLDDATFGSKDKLLQGNGVNYHVASIFLDELTPFL--PVKEDVLEVLFKPFFAVMGKLPDKVLLGKIKSGLFDVLL 654
II+ LA + R + +R+L K W ++ S P ++D ++WKGL+Y +W SDKPLVQ EL ++L+ ++ + + S+ YFS F TM +E+ GID R+DKF +L RR V + N+W+ + + + + + + K G+ H +F +EL + + + +PF + D L+ + ++ + L+
Sbjct: 43 IIRALACNDVVERNRQIRILRK-WFKARAGSSFPFNEDDFMRIWKGLYYTMWMSDKPLVQEELAEKLAQMVDSFGGNTACSLAYFSAFMRTMCQEYFGIDQWRMDKFLMLTRRMVRYLLRFLKQNNWNADLIAAFNSSMQLSVMSEQPK---SRGMTMHYLDVFFEELAKAANGEITAAQVNMFLRPFVTYIATQRDAKLVAQCRTRVLYHLM 251
BLAST of Psat4g004960.1 vs. DB:Swiss
Match:
RRP1_CAEEL (Ribosomal RNA processing protein 1 homolog OS=Caenorhabditis elegans OX=6239 GN=C47E12.7 PE=3 SV=2)
HSP 1 Score: 82.0333 bits (201), Expect = 1.770e-15
Identity = 77/289 (26.64%), Postives = 133/289 (46.02%), Query Frame = 1
Query: 43 KQLAISQKSSREKALRLLLKSWLPSQS--QPLPDEDAKKLWKGLFYCVWHSDKPLVQAEXXXXXXXXXXX-XHPSFSVQYFSTFFITMRREWSGIDALRLDKFYLLIRRFVSKTFSLINMNSWDLEFVKVIMNCLDDATFGSKDKLLQGNGVNYHVASIFLDELTPFLPVKEDVLEVLFKPFFAVMG-KLPDKVLLGKIKSGLFDVLLRNGKRLLEVKKSXXXXXXXXXXXXXLGTIALAMG-FGSKLFELASAPDCVQGNRKVLFELHREFLKLEKDAVISGFEFSIP 894
++LA + ++R++ALR+L W+ QS + D D +L KGL Y +W DK ++Q EL DR+ L+ I V++ + F ++ +EW ID R+DKF + +RR V F+ + W + + T S DK + +H ASI LDEL + + + KP+ ++G K + L + +F +L+ +KS + ++ G I + G+ LFE+ RK +++L ++F K + FE +P
Sbjct: 14 QKLACGEPATRQRALRVL-HDWIRDQSAKKHFDDADLMRLCKGLHYVMWMQDKMILQEELADRIGGLINIFTSEEEKVRFVACFLKSLSKEWPHIDRWRMDKFLMEVRRMVRACFTHLAELKWKKDIRDEYWKVFQETTI-STDKSF-NEALKFHFASILLDELDAAGGLTKKQVTACLKPYIELLGNKDISEYLFTSLYEEIFKTILQ--------QKSDLITAVEEGEEMDQGGIEFSYKEIGALLFEVGKQEHLNAKRRKKIYDLVKKFDKSSRGQDPLHFETPVP 291
BLAST of Psat4g004960.1 vs. DB:Swiss
Match:
RRP1_DICDI (Ribosomal RNA processing protein 1 homolog OS=Dictyostelium discoideum OX=44689 GN=rrp1 PE=3 SV=1)
HSP 1 Score: 78.1814 bits (191), Expect = 5.804e-14
Identity = 68/260 (26.15%), Postives = 110/260 (42.31%), Query Frame = 1
Query: 151 KLWKGLFYCVWHSDKPLVQAEXXXXXXXXXXXXHP-SFSVQYFSTFFITMRREWSGIDALRLDKFYLLIRRFVSKTFSLINMNSWDLE-----------------------FVKVIMNCLDDATFGSKDKLLQGNGVNYHVASIFLDELTPFLPVKEDVLEV-----LFKPFFAVMGKLPDKVLLGKIKSGLFDVLLRNGKRLLEVKKSXXXXXXXXXXXXXLGTIALAMGFGSKLFELASAPDCVQGNRKVLFELHREF 843
K+WKGLF ++++DKP+VQ E +S L S+ + FFI +++ W ID R+DKFY L+R+ ++ +F ++ + E F ++N D+T + NGV H A I+L+EL V + +E + PF + K D V +IK +FD LL + + + M F F+ AS+ D ++ NRK L+ L +F
Sbjct: 62 KIWKGLFLSLYNTDKPIVQEEFSRDISKLTTYFKDYKDSLMFIKCFFIILQKHWDYIDKYRVDKFYSLVRKMLNSSFQILKKRNAQHEEGSEEEEARLALNEQIYSGLVKIFKSTVLNTSSDSTTNT-------NGVLLHFADIYLEEL---FKVTQGHMEPINLTKILLPFVNFLTKSEDDVSCKRIKERVFDRLLTTYSPFDKKDAYYLPKVGVSSSTPEIFPTDYEM-FSKLFFKCASSKDTLEQNRKTLYGLKNQF 310
BLAST of Psat4g004960.1 vs. DB:Swiss
Match:
RRP1_YEAST (Ribosomal RNA-processing protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RRP1 PE=1 SV=2)
HSP 1 Score: 61.6178 bits (148), Expect = 3.599e-9
Identity = 51/186 (27.42%), Postives = 81/186 (43.55%), Query Frame = 1
Query: 34 SIIKQLAISQKSSREKALRLLLKSWLPSQSQPLPDEDAKKLWKGLFYCVWHSDKPLVQA--------------EXXXXXXXXXXXXHPSFSVQYFSTFFITMRREWSGIDALRLDKFYLLIRRFVSKTFSLINMNSWDL----EFVKVIMNCLDDATFGSKDKLLQGNGVNYHVASIFLDELTPFL 537
+ +KQL+ + + +R AL L K Q + + KLWKGL+Y +W SD+P Q + D ++ L + +++ F+ M EW ID RLDK+ LLIRR + + +WD E++K ++ L K+ G+ H+ I LDE L
Sbjct: 5 NFVKQLSSNNRKTRVNALEALKKYLTAKQFKENKQIEFNKLWKGLYYAMWFSDRPRPQQRLANELGELHGLYFDPKDNSTADELTTNDKAFIKFSRGFWKVMCFEWFNIDRYRLDKYLLLIRRVLFSQLKYLQSRNWDKKLVDEYIKKVLRWL---PLSGSPKVY--TGIPIHIVDILLDEWERLL 185
The following BLAST results are available for this feature:
BLAST of Psat4g004960.1 vs. DB:Swiss
Analysis Date: 2019-09-12 (
BLAST: P. sativum Cameor genome v1a vs. Swissprot )
Total hits: 9
200 400 600 800 1000 1200 1400 1600 1800 Expect = 2.76e-25 / Id = 33.49 Expect = 4.52e-25 / Id = 33.96 Expect = 2.11e-23 / Id = 41.71 Expect = 2.37e-21 / Id = 30.84 Expect = 3.17e-21 / Id = 31.98 Expect = 5.52e-18 / Id = 28.17 Expect = 1.77e-15 / Id = 26.64 Expect = 5.80e-14 / Id = 26.15 Expect = 3.60e-9 / Id = 27.42 Sequence RRP1B_MOUSE RRP1B_HUMAN RRP1_SCHPO RRP1_HUMAN RRP1_MOUSE RRP1L_DROME RRP1_CAEEL RRP1_DICDI RRP1_YEAST
Match Name E-value Identity Description
RRP1B_MOUSE 2.758e-25 33.49 Ribosomal RNA processing protein 1 homolog B OS=Mu... [more]
RRP1B_HUMAN 4.525e-25 33.96 Ribosomal RNA processing protein 1 homolog B OS=Ho... [more]
RRP1_SCHPO 2.108e-23 41.71 Ribosomal RNA-processing protein 1 homolog OS=Schi... [more]
RRP1_HUMAN 2.368e-21 30.84 Ribosomal RNA processing protein 1 homolog A OS=Ho... [more]
RRP1_MOUSE 3.173e-21 31.98 Ribosomal RNA processing protein 1 homolog A OS=Mu... [more]
RRP1L_DROME 5.524e-18 28.17 Ribosomal RNA processing protein 1 homolog OS=Dros... [more]
RRP1_CAEEL 1.770e-15 26.64 Ribosomal RNA processing protein 1 homolog OS=Caen... [more]
RRP1_DICDI 5.804e-14 26.15 Ribosomal RNA processing protein 1 homolog OS=Dict... [more]
RRP1_YEAST 3.599e-9 27.42 Ribosomal RNA-processing protein 1 OS=Saccharomyce... [more]
back to top
Sequences
The
following sequences are available for this feature:
mRNA sequence
>Psat4g004960.1_Ps_Cameor_v1a ID=Psat4g004960.1_Ps_Cameor_v1a; Name=Psat4g004960.1; organism=Pisum sativum; type=mRNA; length=1985bp GGTTGATGAATTTTTAAATAAATAAAATTAACTAAAGTATTTATGTGCAT ATAGCTACGGGCAAGTTGAACTCTTTTCGTTTTTATATTTCCACCCCTAA CTATCTAGTAATATATTATCAACCTTATTTCTAGGGTTTAGCTTTCACTT TCTTCTCGGCGGCATCAATGGCGAACAACGCTTCATCAGAACTCGGCCGT TCTATCATAAAGCAGCTAGCCATTTCTCAGAAATCTTCCCGTGAAAAAGC TCTCCGTCTTCTCCTAAAATCATGGCTTCCTTCTCAATCTCAACCACTTC CCGACGAAGACGCCAAAAAGCTCTGGAAAGGTCTCTTCTACTGCGTTTGG CACTCCGATAAGCCTCTTGTTCAAGCCGAACTCATCGATCGACTCTCTTC GCTTCTCTTGATACTCCATCCTTCGTTTTCCGTTCAGTATTTCTCCACTT TCTTCATCACCATGCGTCGCGAATGGTCTGGTATCGATGCGTTGAGGTTA GATAAGTTCTATCTTCTGATTCGTAGATTCGTTTCCAAGACTTTTTCTTT AATTAATATGAATTCATGGGATTTGGAATTTGTGAAGGTTATTATGAATT GTTTGGATGATGCTACTTTTGGTTCGAAAGATAAGTTGTTGCAGGGGAAT GGTGTTAATTATCATGTTGCTTCGATTTTTCTTGACGAGCTTACGCCCTT TCTTCCAGTTAAGGAAGATGTTTTGGAAGTGCTTTTTAAGCCGTTTTTTG CTGTGATGGGTAAATTGCCTGATAAGGTTTTGCTAGGGAAGATTAAGAGT GGTTTGTTTGATGTGTTGTTGAGGAATGGGAAGAGGTTGTTGGAGGTTAA GAAGAGTGGGGAGGAAGGTGGTGATGGTAATGTTGATGTTGTGAATTTGG GGACGATAGCGTTGGCTATGGGTTTTGGTTCGAAGTTGTTTGAGTTGGCT TCTGCTCCTGATTGTGTTCAGGGGAATAGAAAGGTTTTGTTTGAACTGCA TCGCGAGTTTTTGAAGCTGGAGAAGGATGCTGTTATTTCAGGGTTTGAGT TTTCCATTCCAGATTCTGTTGCAAGGAATGAGGAGGAAGTTCCTGTTGTT GAGGTTGATGCTGATGTTGTTCTTAATGGTAAGGCGCTGAAGAAATGCAA GAAGGATAAGGAAGAATCTGTTGACAAAGTGAAGAAGGAAAAGAAGAGTA AGAAGAAGAAGAAGAAAGATAAGGATTCTGCCGAGAGCGGGGATAAGAAT GTTCCTACTGAAAATGGTGGAAAATTGATTGTTGAAGAGGTTGACAACGA GTTGGTTTTGACCGAGACTGTGATTTCAAATCTCCAAAAGCAGTTTGAGA AGGTTGCAGCGGAAGCAGGTTTGGATGACGGTGATGCAAGTTTATGCGTT ACACCGAGAGCTACTGAAACTGTATCTAAGAAGAGAAAAAGATCTAAGAG TTCTAAAGGAAAGATATCTCAGGATCTTGAATTGAATGGTGGAGATGCTG AAGACTCTGCAGTAGGTAAGAGTGTGGAGAAAAGTTTGAAGAGGGTAAGA TTTTCCATGAAAAATAACTTGGTATGGAAGCCACACAGTCCTTTACCTCC TCAGAGTTTGAGAATTCCTCCCTCTGTTACACCAAGAGGAAGTGCGCTCA AAAAGGGCGTTCCCCCAGGTCCCATCAGGGAGATGTCTTCCCAGACCAAA AAGGCGAAACTGAAGAAGGTCCGGAGGACAATAATTGGTACACCATCTGT CAAGCGCTTGAGGAAATTGAGAGCTCTTTCTGTGTGATTTTCCTGATGTT GTTAAGGGATGATTTTTCCATGATTTATTTTGTTGACTTTTTATTTGTAA CTGTTAAGAAATTTTGAAACGTCACTATGATGGTTGATTCAAGTTCGTTT TATTGACTACTGTGTGGTTCATCTACATATTCATTTCATTTCTTGCTATC TTATTATTATTATTATTGTTATTGATGTTTTAACT back to top protein sequence of Psat4g004960.1_Ps_Cameor_v1a
>Psat4g004960.1_Ps_Cameor_v1a ID=Psat4g004960.1_Ps_Cameor_v1a; Name=Psat4g004960.1_Ps_Cameor_v1a; organism=Pisum sativum; type=polypeptide; length=540bp MANNASSELGRSIIKQLAISQKSSREKALRLLLKSWLPSQSQPLPDEDAK KLWKGLFYCVWHSDKPLVQAELIDRLSSLLLILHPSFSVQYFSTFFITMR REWSGIDALRLDKFYLLIRRFVSKTFSLINMNSWDLEFVKVIMNCLDDAT FGSKDKLLQGNGVNYHVASIFLDELTPFLPVKEDVLEVLFKPFFAVMGKL PDKVLLGKIKSGLFDVLLRNGKRLLEVKKSGEEGGDGNVDVVNLGTIALA MGFGSKLFELASAPDCVQGNRKVLFELHREFLKLEKDAVISGFEFSIPDS VARNEEEVPVVEVDADVVLNGKALKKCKKDKEESVDKVKKEKKSKKKKKK DKDSAESGDKNVPTENGGKLIVEEVDNELVLTETVISNLQKQFEKVAAEA GLDDGDASLCVTPRATETVSKKRKRSKSSKGKISQDLELNGGDAEDSAVG KSVEKSLKRVRFSMKNNLVWKPHSPLPPQSLRIPPSVTPRGSALKKGVPP GPIREMSSQTKKAKLKKVRRTIIGTPSVKRLRKLRALSV* back to top mRNA from alignment at chr4LG4:5262684..5264668-
Legend: five_prime_UTR exon polypeptide CDS three_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Psat4g004960.1_Ps_Cameor_v1a ID=Psat4g004960.1_Ps_Cameor_v1a; Name=Psat4g004960.1; organism=Pisum sativum; type=mRNA; length=1985bp; location=Sequence derived from: chr4LG4:5262684..5264668- (Pisum sativumGGTTGATGAATTTTTAAATAAATAAAATTAACTAAAGTATTTATGTGCAT
ATAGCTACGGGCAAGTTGAACTCTTTTCGTTTTTATATTTCCACCCCTAA
CTATCTAGTAATATATTATCAACCTTATTTCTAGGGTTTAGCTTTCACTT
TCTTCTCGGCGGCATCA ATGGCGAACAACGCTTCATCAGAACTCGGCCGT
TCTATCATAAAGCAGCTAGCCATTTCTCAGAAATCTTCCCGTGAAAAAGC
TCTCCGTCTTCTCCTAAAATCATGGCTTCCTTCTCAATCTCAACCACTTC
CCGACGAAGACGCCAAAAAGCTCTGGAAAGGTCTCTTCTACTGCGTTTGG
CACTCCGATAAGCCTCTTGTTCAAGCCGAACTCATCGATCGACTCTCTTC
GCTTCTCTTGATACTCCATCCTTCGTTTTCCGTTCAGTATTTCTCCACTT
TCTTCATCACCATGCGTCGCGAATGGTCTGGTATCGATGCGTTGAGGTTA
GATAAGTTCTATCTTCTGATTCGTAGATTCGTTTCCAAGACTTTTTCTTT
AATTAATATGAATTCATGGGATTTGGAATTTGTGAAGGTTATTATGAATT
GTTTGGATGATGCTACTTTTGGTTCGAAAGATAAGTTGTTGCAGGGGAAT
GGTGTTAATTATCATGTTGCTTCGATTTTTCTTGACGAGCTTACGCCCTT
TCTTCCAGTTAAGGAAGATGTTTTGGAAGTGCTTTTTAAGCCGTTTTTTG
CTGTGATGGGTAAATTGCCTGATAAGGTTTTGCTAGGGAAGATTAAGAGT
GGTTTGTTTGATGTGTTGTTGAGGAATGGGAAGAGGTTGTTGGAGGTTAA
GAAGAGTGGGGAGGAAGGTGGTGATGGTAATGTTGATGTTGTGAATTTGG
GGACGATAGCGTTGGCTATGGGTTTTGGTTCGAAGTTGTTTGAGTTGGCT
TCTGCTCCTGATTGTGTTCAGGGGAATAGAAAGGTTTTGTTTGAACTGCA
TCGCGAGTTTTTGAAGCTGGAGAAGGATGCTGTTATTTCAGGGTTTGAGT
TTTCCATTCCAGATTCTGTTGCAAGGAATGAGGAGGAAGTTCCTGTTGTT
GAGGTTGATGCTGATGTTGTTCTTAATGGTAAGGCGCTGAAGAAATGCAA
GAAGGATAAGGAAGAATCTGTTGACAAAGTGAAGAAGGAAAAGAAGAGTA
AGAAGAAGAAGAAGAAAGATAAGGATTCTGCCGAGAGCGGGGATAAGAAT
GTTCCTACTGAAAATGGTGGAAAATTGATTGTTGAAGAGGTTGACAACGA
GTTGGTTTTGACCGAGACTGTGATTTCAAATCTCCAAAAGCAGTTTGAGA
AGGTTGCAGCGGAAGCAGGTTTGGATGACGGTGATGCAAGTTTATGCGTT
ACACCGAGAGCTACTGAAACTGTATCTAAGAAGAGAAAAAGATCTAAGAG
TTCTAAAGGAAAGATATCTCAGGATCTTGAATTGAATGGTGGAGATGCTG
AAGACTCTGCAGTAGGTAAGAGTGTGGAGAAAAGTTTGAAGAGGGTAAGA
TTTTCCATGAAAAATAACTTGGTATGGAAGCCACACAGTCCTTTACCTCC
TCAGAGTTTGAGAATTCCTCCCTCTGTTACACCAAGAGGAAGTGCGCTCA
AAAAGGGCGTTCCCCCAGGTCCCATCAGGGAGATGTCTTCCCAGACCAAA
AAGGCGAAACTGAAGAAGGTCCGGAGGACAATAATTGGTACACCATCTGT
CAAGCGCTTGAGGAAATTGAGAGCTCTTTCTGTGTGA TTTTCCTGATGTT
GTTAAGGGATGATTTTTCCATGATTTATTTTGTTGACTTTTTATTTGTAA
CTGTTAAGAAATTTTGAAACGTCACTATGATGGTTGATTCAAGTTCGTTT
TATTGACTACTGTGTGGTTCATCTACATATTCATTTCATTTCTTGCTATC
TTATTATTATTATTATTGTTATTGATGTTTTAACT back to top Coding sequence (CDS) from alignment at chr4LG4:5262684..5264668-
>Psat4g004960.1_Ps_Cameor_v1a ID=Psat4g004960.1_Ps_Cameor_v1a; Name=Psat4g004960.1; organism=Pisum sativum; type=CDS; length=3240bp; location=Sequence derived from: chr4LG4:5262684..5264668- (Pisum sativum ATGGCGAACAACGCTTCATCAGAACTCGGCCGTTCTATCATAAAGCAGCT AGCCATTTCTCAGAAATCTTCCCGTGAAAAAGCTCTCCGTCTTCTCCTAA AATCATGGCTTCCTTCTCAATCTCAACCACTTCCCGACGAAGACGCCAAA AAGCTCTGGAAAGGTCTCTTCTACTGCGTTTGGCACTCCGATAAGCCTCT TGTTCAAGCCGAACTCATCGATCGACTCTCTTCGCTTCTCTTGATACTCC ATCCTTCGTTTTCCGTTCAGTATTTCTCCACTTTCTTCATCACCATGCGT CGCGAATGGTCTGGTATCGATGCGTTGAGGTTAGATAAGTTCTATCTTCT GATTCGTAGATTCGTTTCCAAGACTTTTTCTTTAATTAATATGAATTCAT GGGATTTGGAATTTGTGAAGGTTATTATGAATTGTTTGGATGATGCTACT TTTGGTTCGAAAGATAAGTTGTTGCAGGGGAATGGTGTTAATTATCATGT TGCTTCGATTTTTCTTGACGAGCTTACGCCCTTTCTTCCAGTTAAGGAAG ATGTTTTGGAAGTGCTTTTTAAGCCGTTTTTTGCTGTGATGGGTAAATTG CCTGATAAGGTTTTGCTAGGGAAGATTAAGAGTGGTTTGTTTGATGTGTT GTTGAGGAATGGGAAGAGGTTGTTGGAGGTTAAGAAGAGTGGGGAGGAAG GTGGTGATGGTAATGTTGATGTTGTGAATTTGGGGACGATAGCGTTGGCT ATGGGTTTTGGTTCGAAGTTGTTTGAGTTGGCTTCTGCTCCTGATTGTGT TCAGGGGAATAGAAAGGTTTTGTTTGAACTGCATCGCGAGTTTTTGAAGC TGGAGAAGGATGCTGTTATTTCAGGGTTTGAGTTTTCCATTCCAGATTCT GTTGCAAGGAATGAGGAGGAAGTTCCTGTTGTTGAGGTTGATGCTGATGT TGTTCTTAATGGTAAGGCGCTGAAGAAATGCAAGAAGGATAAGGAAGAAT CTGTTGACAAAGTGAAGAAGGAAAAGAAGAGTAAGAAGAAGAAGAAGAAA GATAAGGATTCTGCCGAGAGCGGGGATAAGAATGTTCCTACTGAAAATGG TGGAAAATTGATTGTTGAAGAGGTTGACAACGAGTTGGTTTTGACCGAGA CTGTGATTTCAAATCTCCAAAAGCAGTTTGAGAAGGTTGCAGCGGAAGCA GGTTTGGATGACGGTGATGCAAGTTTATGCGTTACACCGAGAGCTACTGA AACTGTATCTAAGAAGAGAAAAAGATCTAAGAGTTCTAAAGGAAAGATAT CTCAGGATCTTGAATTGAATGGTGGAGATGCTGAAGACTCTGCAGTAGGT AAGAGTGTGGAGAAAAGTTTGAAGAGGGTAAGATTTTCCATGAAAAATAA CTTGGTATGGAAGCCACACAGTCCTTTACCTCCTCAGAGTTTGAGAATTC CTCCCTCTGTTACACCAAGAGGAAGTGCGCTCAAAAAGGGCGTTCCCCCA GGTCCCATCAGGGAGATGTCTTCCCAGACCAAAAAGGCGAAACTGAAGAA GGTCCGGAGGACAATAATTGGTACACCATCTGTCAAGCGCTTGAGGAAAT TGAGAGCTCTTTCTGTGTGAATGGCGAACAACGCTTCATCAGAACTCGGC CGTTCTATCATAAAGCAGCTAGCCATTTCTCAGAAATCTTCCCGTGAAAA AGCTCTCCGTCTTCTCCTAAAATCATGGCTTCCTTCTCAATCTCAACCAC TTCCCGACGAAGACGCCAAAAAGCTCTGGAAAGGTCTCTTCTACTGCGTT TGGCACTCCGATAAGCCTCTTGTTCAAGCCGAACTCATCGATCGACTCTC TTCGCTTCTCTTGATACTCCATCCTTCGTTTTCCGTTCAGTATTTCTCCA CTTTCTTCATCACCATGCGTCGCGAATGGTCTGGTATCGATGCGTTGAGG TTAGATAAGTTCTATCTTCTGATTCGTAGATTCGTTTCCAAGACTTTTTC TTTAATTAATATGAATTCATGGGATTTGGAATTTGTGAAGGTTATTATGA ATTGTTTGGATGATGCTACTTTTGGTTCGAAAGATAAGTTGTTGCAGGGG AATGGTGTTAATTATCATGTTGCTTCGATTTTTCTTGACGAGCTTACGCC CTTTCTTCCAGTTAAGGAAGATGTTTTGGAAGTGCTTTTTAAGCCGTTTT TTGCTGTGATGGGTAAATTGCCTGATAAGGTTTTGCTAGGGAAGATTAAG AGTGGTTTGTTTGATGTGTTGTTGAGGAATGGGAAGAGGTTGTTGGAGGT TAAGAAGAGTGGGGAGGAAGGTGGTGATGGTAATGTTGATGTTGTGAATT TGGGGACGATAGCGTTGGCTATGGGTTTTGGTTCGAAGTTGTTTGAGTTG GCTTCTGCTCCTGATTGTGTTCAGGGGAATAGAAAGGTTTTGTTTGAACT GCATCGCGAGTTTTTGAAGCTGGAGAAGGATGCTGTTATTTCAGGGTTTG AGTTTTCCATTCCAGATTCTGTTGCAAGGAATGAGGAGGAAGTTCCTGTT GTTGAGGTTGATGCTGATGTTGTTCTTAATGGTAAGGCGCTGAAGAAATG CAAGAAGGATAAGGAAGAATCTGTTGACAAAGTGAAGAAGGAAAAGAAGA GTAAGAAGAAGAAGAAGAAAGATAAGGATTCTGCCGAGAGCGGGGATAAG AATGTTCCTACTGAAAATGGTGGAAAATTGATTGTTGAAGAGGTTGACAA CGAGTTGGTTTTGACCGAGACTGTGATTTCAAATCTCCAAAAGCAGTTTG AGAAGGTTGCAGCGGAAGCAGGTTTGGATGACGGTGATGCAAGTTTATGC GTTACACCGAGAGCTACTGAAACTGTATCTAAGAAGAGAAAAAGATCTAA GAGTTCTAAAGGAAAGATATCTCAGGATCTTGAATTGAATGGTGGAGATG CTGAAGACTCTGCAGTAGGTAAGAGTGTGGAGAAAAGTTTGAAGAGGGTA AGATTTTCCATGAAAAATAACTTGGTATGGAAGCCACACAGTCCTTTACC TCCTCAGAGTTTGAGAATTCCTCCCTCTGTTACACCAAGAGGAAGTGCGC TCAAAAAGGGCGTTCCCCCAGGTCCCATCAGGGAGATGTCTTCCCAGACC AAAAAGGCGAAACTGAAGAAGGTCCGGAGGACAATAATTGGTACACCATC TGTCAAGCGCTTGAGGAAATTGAGAGCTCTTTCTGTGTGA back to top