Psat4g005560.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Psat4g005560.1 vs. DB:Swiss
Match: JMJ25_ARATH (Lysine-specific demethylase JMJ25 OS=Arabidopsis thaliana OX=3702 GN=JMJ25 PE=1 SV=1) HSP 1 Score: 461.84 bits (1187), Expect = 1.214e-146 Identity = 261/523 (49.90%), Postives = 322/523 (61.57%), Query Frame = 1 Query: 1039 HLELSTKWNAKTDGSICCAPKEIGGCGSSVLELRRSLPHGWMSDLEARAHNMLTNWE---TEQTALQ-----------------------REGAESNYNSMKKESFSESR-DILKQGMPLFQKHWANGEPIIVRDVLKQGTGLSWEPMVMWRALCDNVGSVMSSKMSEVKAIDCMANCEVEINTRRFFKGYIEGRTYRNLWPEMLKLKDWPPSDKFEDLLPRHCDEFIHSLPFQQYTDPRAGILNLAVKLPAHVLKPDMGPKTYIAYGIREELGRGDSVTKLHCDMSDAVNILTHTAEVQLTDDQHSAIPKLKEAHKTQDXXXXXXXXXXXXCLNSRLCDNREHENRPIQISGDMFRNDVSEGGNFAATIENETMVTGSALWDIFRREDTEKLGAYLRKHSKEFRHTYCSPIEEVVHPIHDQCFYXXXXXXXXXXXXFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAADFVSPENVHECLRLTEEFRQLPKNHKAREDKLEIKKMIVYAVDQALKDL 2526 H++ + W A G I C CG+ L L+R LP GW+S+L R E +T L+ REG+E NY +S S D+ + + FQ HW GEP+IVR+VL+ +GLSWEPMVM RA C + V + +V A+DC+ CEV++N FF GY +GR R WP +LKLKDWPP+ F+D LPRH +EF+ SLP + YT P G LNLAVKLP + LKPDMGPKTY+A G +ELGRGDSVTKLHCDMSDAVNILTH +EV + I LK+ H QD +E L S + N+E ++ S +N ++ G ALWDIFRRED KL +Y+ KH KEFRH YC P+ +VVHPIHDQ FYLT H KLKEE+G+EPWTF QKLG+AV IP GCPHQVRNLKSC KVA DFVSPENV ECLRLT+++R LP NH A+EDKL +KKMIV+AVD+AL+DL Sbjct: 410 HMKYPSLWKANEAGIITCC------CGAGELVLKRLLPDGWISELVNRVEKTAEAGELLNLPETVLERCPCSNSDRHIDIDSCNLLKAACREGSEDNY------LYSPSVWDVQQDDLKHFQHHWVKGEPVIVRNVLEATSGLSWEPMVMHRA-CRQISHVQHGSLKDVVAVDCLDFCEVKVNLHEFFTGYTDGRYDRMGWPLVLKLKDWPPAKVFKDNLPRHAEEFLCSLPLKHYTHPVNGPLNLAVKLPQNCLKPDMGPKTYVASGFAQELGRGDSVTKLHCDMSDAVNILTHISEVP---NMQPGIGNLKKKHAEQDLKE----------LYSSVA-NKEEMMEILENSRQQVQNVETDDG---------------ALWDIFRREDIPKLESYIEKHHKEFRHLYCCPVSQVVHPIHDQNFYLTRYHIMKLKEEYGIEPWTFNQKLGDAVLIPVGCPHQVRNLKSCNKVALDFVSPENVSECLRLTKQYRLLPPNHFAKEDKLGVKKMIVHAVDKALRDL 890 HSP 2 Score: 155.221 bits (391), Expect = 2.081e-37 Identity = 79/187 (42.25%), Postives = 115/187 (61.50%), Query Frame = 1 Query: 445 CHQCLKKERMSFVPCTKC-SKMYCMRCINQWYPDMSIEEVAGSCPFCLKICNCNVCLRSKGTIK--TSNMDINNYEKAQYLHYMINLLHPYLKQICHEQSQEVDIEAKIQGKPSSEIVVPQSLCWDNERVYCDYCATSIIDLHRSCPSCSYELCLKCCQEVRDG-SITPRAEMKFPYVNRGYDYMHG 993 CHQC K +R+ C C SK YC C++ WYP ++ E+VA C FC CNC CLR +K SN+ ++ EK Q +++ L P+LK I EQ E ++EAKI G E+ + + +ER+YCD C TSI DLHR+C SCS+++CL CC E+R+G ++ + ++ + Y+NRG +Y HG Sbjct: 155 CHQCQKSDRI-VERCQTCNSKRYCHPCLDTWYPLIAKEDVAKKCMFCSSTCNCRACLRLDTKLKGINSNLIVSEEEKVQASKFILQSLLPHLKGINDEQVAEKEVEAKIYGLKFEEVRPQDAKAFPDERLYCDICKTSIYDLHRNCKSCSFDICLSCCLEIRNGKALACKEDVSWNYINRGLEYEHG 340
BLAST of Psat4g005560.1 vs. DB:Swiss
Match: KDM3B_HUMAN (Lysine-specific demethylase 3B OS=Homo sapiens OX=9606 GN=KDM3B PE=1 SV=2) HSP 1 Score: 215.312 bits (547), Expect = 1.957e-56 Identity = 145/411 (35.28%), Postives = 211/411 (51.34%), Query Frame = 1 Query: 1315 LFQKHWANGEPIIVRDVLKQGTGLSWEPMVMWRALCDNVGSVMSSKMSEVKAIDCMANCEV--EINTRRFFKGY-IEGRTYR--NLWPEMLKLKDWPPSDKFEDLLPRHCDEFIHSLPFQQYTDPRAGILNLAVKLPAHVLKPDMGPKTYIAYGIREELGRGDSVTKLHCDMSDAVNILTHTAEVQLTDDQHSAIPKLKEAHKTQDXXXXXXXXXXXXCLNSRLCDNREHENRPIQISGDMFRNDVSEGGNFAATIENETMVTGSALWDIFRREDTEKLGAYLRKHSKEFRHTYCSPIEEVVHPIHDQCFYXXXXXXXXXXXXFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAADFVSPENVHECLRLTEEFRQLPKNHKAREDKLEIKKMIVYAVDQALKDLEA 2532 +F++ W G+P++V V K+ W+P + D +V ++C NC + ++ R F+ G+ I + R + P +LKLKDWPP + F D++P ++ + +LP +YT R G LNLA +LP++ ++PD+GPK Y AYG+ R T LH D+SDAVN++ + + + + H +E KT DE + R+ D +E ALW I+ +D EK+ LRK +E +P + PIHDQ +YL +K+L EE+GV+ W Q LG+AVFIPAG PHQV NL SC KVA DFVSPE+V C RLT+EFR L H EDKL++K +I +AV A+ L+A Sbjct: 1404 IFRECWKQGQPVLVSGVHKKLKSELWKPEAFSQEFGDQ----------DVDLVNCR-NCAIISDVKVRDFWDGFEIICKRLRSEDGQPMVLKLKDWPPGEDFRDMMPTRFEDLMENLPLPEYTK-RDGRLNLASRLPSYFVRPDLGPKMYNAYGLITAEDRRVGTTNLHLDVSDAVNVMVYVG-IPIGEGAHD-----EEVLKTIDEGDADE------VTKQRIHDGKEKPG---------------------------------ALWHIYAAKDAEKIRELLRKVGEE--QGQENPPDH--DPIHDQSWYLDQTLRKRLYEEYGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFRLTQEFRHLSNTHTNHEDKLQVKNIIYHAVKDAVGTLKA 1753
BLAST of Psat4g005560.1 vs. DB:Swiss
Match: KDM3B_MOUSE (Lysine-specific demethylase 3B OS=Mus musculus OX=10090 GN=Kdm3b PE=1 SV=2) HSP 1 Score: 214.542 bits (545), Expect = 3.133e-56 Identity = 144/411 (35.04%), Postives = 209/411 (50.85%), Query Frame = 1 Query: 1315 LFQKHWANGEPIIVRDVLKQGTGLSWEPMVMWRALCDNVGSVMSSKMSEVKAIDCMANCEV--EINTRRFFKGY-IEGRTYR--NLWPEMLKLKDWPPSDKFEDLLPRHCDEFIHSLPFQQYTDPRAGILNLAVKLPAHVLKPDMGPKTYIAYGIREELGRGDSVTKLHCDMSDAVNILTHTAEVQLTDDQHSAIPKLKEAHKTQDXXXXXXXXXXXXCLNSRLCDNREHENRPIQISGDMFRNDVSEGGNFAATIENETMVTGSALWDIFRREDTEKLGAYLRKHSKEFRHTYCSPIEEVVHPIHDQCFYXXXXXXXXXXXXFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAADFVSPENVHECLRLTEEFRQLPKNHKAREDKLEIKKMIVYAVDQALKDLEA 2532 +F++ W G+P++V V K+ W+P + D +V ++C NC + ++ R F+ G+ I + R + P +LKLKDWPP + F D++P ++ + +LP +YT R G LNLA +LP++ ++PD+GPK Y AYG+ R T LH D+SDAVN++ + IP + AH ++ + A R+ D +E ALW I+ +D EK+ LRK +E +P + PIHDQ +YL +K+L EE+GV+ W Q LG+AVFIPAG PHQV NL SC KVA DFVSPE+V C RLT+EFR L H EDKL++K +I +AV A+ L+A Sbjct: 1205 IFRECWKQGQPVLVSGVHKKLKSELWKPEAFSQEFGDQ----------DVDLVNCR-NCAIISDVKVRDFWDGFEIICKRLRSEDGQPMVLKLKDWPPGEDFRDMMPTRFEDLMENLPLPEYTK-RDGRLNLASRLPSYFVRPDLGPKMYNAYGLITAEDRRVGTTNLHLDVSDAVNVMVYVG-----------IPVGEGAHD-EEVLKTIDEGDADEVTKQRIHDGKEKPG---------------------------------ALWHIYAAKDAEKIRELLRKVGEE--QGQENPPDH--DPIHDQSWYLDQILRKRLFEEYGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFRLTQEFRHLSNTHTNHEDKLQVKNIIYHAVKDAVGTLKA 1554
BLAST of Psat4g005560.1 vs. DB:Swiss
Match: KDM3A_RAT (Lysine-specific demethylase 3A OS=Rattus norvegicus OX=10116 GN=Kdm3a PE=2 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.434e-53 Identity = 142/417 (34.05%), Postives = 207/417 (49.64%), Query Frame = 1 Query: 1315 LFQKHWANGEPIIVRDVLKQGTGLSWEPMVMWRALCDNVGSVMSSKMSEVKAIDCMANCEVEINTRRFFKGYIEG--------RTYRNLWPEMLKLKDWPPSDKFEDLLPRHCDEFIHSLPFQQYTDPRAGILNLAVKLPAHVLKPDMGPKTYIAYGIREELGRGDSVTKLHCDMSDAVNILTHTAEVQLTDDQHSAIPKLKEAHKTQDXXXXXXXXXXXXCLNSRLCDNREHENRPIQISGDMFRNDVSEGGNFAATIEN--ETMVTGSALWDIFRREDTEKLGAYLRKHSKEFRHTYCSPIEEVVHPIHDQCFYXXXXXXXXXXXXFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAADFVSPENVHECLRLTEEFRQLPKNHKAREDKLEIKKMIVYAVDQALKDLEAL 2535 +F++ W G+P++V V + W+P + + EV ++C N EI T + +G + + P +LKLKDWPP + F D++P D+ + ++P +YT R G LNLA +LP + ++PD+GPK Y AYG+ R T LH D+SDA N++ + IPK + C+ E R IQ +G + TI+ E ALW I+ +DTEK+ +L+K S+E +P + PIHDQ +YL +K+L +E+GV+ W Q LG+ VFIPAG PHQV NL SC KVA DFVSPE+V C LT+EFR L + H EDKL++K +I +AV A+ L+A+ Sbjct: 849 VFRECWKQGQPVMVSGVHHKLNTELWKPESFRKEFGEQ----------EVDLVNCRTN---EIITGATVGDFWDGFEDVPNRLKNEKEKEPMVLKLKDWPPGEDFRDMMPSRFDDLMANIPLPEYTR-RDGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMVYVG-----------IPKGQ-------------------------CEQEEEVLRTIQ-----------DGDSDELTIKRFIEGKEKPGALWHIYAAKDTEKIREFLKKVSEEQGQE--NPADH--DPIHDQSWYLDRSLRKRLYQEYGVQGWAIVQFLGDVVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFWLTQEFRHLSQTHTNHEDKLQVKNVIYHAVKDAVAMLKAV 1200
BLAST of Psat4g005560.1 vs. DB:Swiss
Match: KDM3A_HUMAN (Lysine-specific demethylase 3A OS=Homo sapiens OX=9606 GN=KDM3A PE=1 SV=4) HSP 1 Score: 206.068 bits (523), Expect = 1.888e-53 Identity = 141/411 (34.31%), Postives = 206/411 (50.12%), Query Frame = 1 Query: 1315 LFQKHWANGEPIIVRDVLKQGTGLSWEPMVMWRALCDNVGSVMSSKMSEVKAIDCMANCEVEINT-RRFFKGY--IEGRTYRNLWPEMLKLKDWPPSDKFEDLLPRHCDEFIHSLPFQQYTDPRAGILNLAVKLPAHVLKPDMGPKTYIAYGIREELGRGDSVTKLHCDMSDAVNILTHTAEVQLTDDQHSAIPKLKEAHKTQDXXXXXXXXXXXXCLNSRLCDNREHENRPIQISGDMFRNDVSEGGNFAATIEN--ETMVTGSALWDIFRREDTEKLGAYLRKHSKEFRHTYCSPIEEVVHPIHDQCFYXXXXXXXXXXXXFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAADFVSPENVHECLRLTEEFRQLPKNHKAREDKLEIKKMIVYAVDQALKDLEA 2532 +F++ W G+P++V V + W+P + + EV ++C N + T F+ G+ + R P +LKLKDWPP + F D++P D+ + ++P +YT R G LNLA +LP + ++PD+GPK Y AYG+ R T LH D+SDA N++ + IPK + C+ E + IQ +G + TI+ E ALW I+ +DTEK+ +L+K S+E +P + PIHDQ +YL +K+L +E+GV+ W Q LG+ VFIPAG PHQV NL SC KVA DFVSPE+V C LT+EFR L + H EDKL++K +I +AV A+ L+A Sbjct: 965 VFRECWKQGQPVMVSGVHHKLNSELWKPESFRKEFGEQ----------EVDLVNCRTNEIITGATVGDFWDGFEDVPNRLKNEKEPMVLKLKDWPPGEDFRDMMPSRFDDLMANIPLPEYTR-RDGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMVYVG-----------IPKGQ-------------------------CEQEEEVLKTIQ-----------DGDSDELTIKRFIEGKEKPGALWHIYAAKDTEKIREFLKKVSEEQGQE--NPADH--DPIHDQSWYLDRSLRKRLHQEYGVQGWAIVQFLGDVVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFWLTQEFRYLSQTHTNHEDKLQVKNVIYHAVKDAVAMLKA 1313
BLAST of Psat4g005560.1 vs. DB:Swiss
Match: KDM3A_MOUSE (Lysine-specific demethylase 3A OS=Mus musculus OX=10090 GN=Kdm3a PE=1 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 4.652e-53 Identity = 142/416 (34.13%), Postives = 206/416 (49.52%), Query Frame = 1 Query: 1315 LFQKHWANGEPIIVRDVLKQGTGLSWEPMVMWRALCDNVGSVMSSKMSEVKAIDCMANCEVEINTRRFFKGYIEG--------RTYRNLWPEMLKLKDWPPSDKFEDLLPRHCDEFIHSLPFQQYTDPRAGILNLAVKLPAHVLKPDMGPKTYIAYGIREELGRGDSVTKLHCDMSDAVNILTHTAEVQLTDDQHSAIPKLKEAHKTQDXXXXXXXXXXXXCLNSRLCDNREHENRPIQISGDMFRNDVSEGGNFAATIEN--ETMVTGSALWDIFRREDTEKLGAYLRKHSKEFRHTYCSPIEEVVHPIHDQCFYXXXXXXXXXXXXFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAADFVSPENVHECLRLTEEFRQLPKNHKAREDKLEIKKMIVYAVDQALKDLEA 2532 +F++ W G+P++V V + W+P + + EV ++C N EI T + +G + + P +LKLKDWPP + F D++P D+ + ++P +YT R G LNLA +LP + ++PD+GPK Y AYG+ R T LH D+SDA N++ + IPK + C+ E R IQ +G + TI+ E ALW I+ +DTEK+ +L+K S+E +P + PIHDQ +YL +K+L +E+GV+ W Q LG+ VFIPAG PHQV NL SC KVA DFVSPE+V C LT+EFR L + H EDKL++K +I +AV A+ L+A Sbjct: 965 VFRECWKQGQPVMVSGVHHKLNTELWKPESFRKEFGEQ----------EVDLVNCRTN---EIITGATVGDFWDGFEDVPNRLKNDKEKEPMVLKLKDWPPGEDFRDMMPSRFDDLMANIPLPEYTR-RDGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMVYVG-----------IPKGQ-------------------------CEQEEEVLRTIQ-----------DGDSDELTIKRFIEGKEKPGALWHIYAAKDTEKIREFLKKVSEE--QGQDNPADH--DPIHDQSWYLDRSLRKRLYQEYGVQGWAIVQFLGDVVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFWLTQEFRYLSQTHTNHEDKLQVKNVIYHAVKDAVAMLKA 1315
BLAST of Psat4g005560.1 vs. DB:Swiss
Match: KDM3A_CHICK (Lysine-specific demethylase 3A OS=Gallus gallus OX=9031 GN=KDM3A PE=2 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 2.791e-52 Identity = 142/424 (33.49%), Postives = 202/424 (47.64%), Query Frame = 1 Query: 1315 LFQKHWANGEPIIVRDVLKQGTGLSWEPMVMWRALCDNVGSVMSSKMSEVKAIDCMANCEVEINTRRFFKGYIEGRTYRNLW----------------PEMLKLKDWPPSDKFEDLLPRHCDEFIHSLPFQQYTDPRAGILNLAVKLPAHVLKPDMGPKTYIAYGIREELGRGDSVTKLHCDMSDAVNILTHTAEVQLTDDQHSAIPKLKEAHKTQDXXXXXXXXXXXXCLNSRLCDNREHENRPIQISGDMFRNDVSEGGNFAATIE--NETMVTGSALWDIFRREDTEKLGAYLRKHSKEFRHTYCSPIEEVVHPIHDQCFYXXXXXXXXXXXXFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAADFVSPENVHECLRLTEEFRQLPKNHKAREDKLEIKKMIVYAVDQALKDLEA 2532 +F++ W G+P++V V + W P + EV ++C N EI I G T + W P +LKLKDWPP + F D++P D+ + ++P +YT R G LNLA +LP + ++PD+GPK Y AYG+ R T LH D+SDA N++ + IPK + D E + IQ +G + TI+ E+ ALW I+ +DTEK+ +L+K ++E +P++ PIHDQ +YL +K+L +E+GV+ W Q LG+ VFIPAG PHQV NL SC KVA DFVSPE+V C LT+EFR L H EDKL++K +I +AV A+ L A Sbjct: 968 VFRECWKQGQPVMVSGVHHKLNADLWRPESFRKEF----------GQQEVDLVNCRTN---EI---------ITGATVGDFWDGFEDISSRLRTEEGEPMVLKLKDWPPGEDFRDMMPSRFDDLMKNIPLPEYTR-RGGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMVYVG-----------IPKGQ-------------------------ADQEEEVLKTIQ-----------DGDSDELTIKRFTESREKPGALWHIYAAKDTEKIREFLKKVAEE--QGQENPVDH--DPIHDQSWYLDRSLRKRLHQEYGVQGWAIVQFLGDVVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFWLTQEFRYLSHTHTNHEDKLQVKNVIYHAVKDAVGILRA 1317
BLAST of Psat4g005560.1 vs. DB:Swiss
Match: KD3AA_XENLA (Lysine-specific demethylase 3A-A OS=Xenopus laevis OX=8355 GN=kdm3a-a PE=2 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.573e-51 Identity = 139/411 (33.82%), Postives = 204/411 (49.64%), Query Frame = 1 Query: 1315 LFQKHWANGEPIIVRDVLKQGTGLSWEPMVMWRALCDNVGSVMSSKMSEVKAIDCMANCEVEINTRRFFKGY--IEGRTYRNLWPEM-LKLKDWPPSDKFEDLLPRHCDEFIHSLPFQQYTDPRAGILNLAVKLPAHVLKPDMGPKTYIAYGIREELGRGDSVTKLHCDMSDAVNILTHTAEVQLTDDQHSAIPKLKEAHKTQDXXXXXXXXXXXXCLNSRLCDNREHENRPIQISGDMFRNDVSEGGNFAATIEN--ETMVTGSALWDIFRREDTEKLGAYLRKHSKEFRHTYCSPIEEVVHPIHDQCFYXXXXXXXXXXXXFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAADFVSPENVHECLRLTEEFRQLPKNHKAREDKLEIKKMIVYAVDQALKDLEA 2532 +F++ W G+P+IV + W P R D +++ + +++ + + F++G+ I R + M LKLKDWPP + F D + ++ ++++P +YT R G LNLA +LPA+ ++PD+GPK Y AYG+ R T LH D+SDA N++ + IPK + D + R IQ +G TI+ E ALW IF +DTEK+ +L+K ++E H +P + PIHDQ +YL +K+L +E GV+ W Q LG+AVFIPAG PHQV NL SC KVA DFVSPE+V C LT+EFR L H EDKL++K +I +AV ++ L+A Sbjct: 974 VFRECWKQGQPVIVSGIHNNLNSELWRPESFRREFGDQEADLVNCRTNDIITGATVGD---------FWEGFEDISARLKNDKGEAMVLKLKDWPPGEDFRDTMLSRFEDLMNNIPLPEYTR-REGKLNLAARLPAYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDATNVMVYVG-----------IPKGEH-------------------------DQEQEVIRTIQ-----------DGDADELTIKRYIEFKEKPGALWHIFAAKDTEKIRQFLKKVAEEQGHE--NPPDH--DPIHDQSWYLDNTLRKRLLQEHGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFWLTQEFRYLSHTHTNHEDKLQVKNVIYHAVKDSIAILKA 1323
BLAST of Psat4g005560.1 vs. DB:Swiss
Match: KD3AB_XENLA (Lysine-specific demethylase 3A-B OS=Xenopus laevis OX=8355 GN=kdm3a-b PE=2 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 1.197e-50 Identity = 138/411 (33.58%), Postives = 203/411 (49.39%), Query Frame = 1 Query: 1315 LFQKHWANGEPIIVRDVLKQGTGLSWEPMVMWRALCDNVGSVMSSKMSEVKAIDCMANCEVEINTRRFFKGY--IEGRTYRNLWPEM-LKLKDWPPSDKFEDLLPRHCDEFIHSLPFQQYTDPRAGILNLAVKLPAHVLKPDMGPKTYIAYGIREELGRGDSVTKLHCDMSDAVNILTHTAEVQLTDDQHSAIPKLKEAHKTQDXXXXXXXXXXXXCLNSRLCDNREHENRPIQISGDMFRNDVSEGGNFAATIEN--ETMVTGSALWDIFRREDTEKLGAYLRKHSKEFRHTYCSPIEEVVHPIHDQCFYXXXXXXXXXXXXFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAADFVSPENVHECLRLTEEFRQLPKNHKAREDKLEIKKMIVYAVDQALKDLEA 2532 +F++ W G+P++V V W P R D +++ + +++ + + F+ G+ I GR + M LKLKDWPP + F D + ++ ++++P +YT R G LNLA +LP + ++PD+GPK Y AYG+ R T LH D+SDA N++ + IPK + D + R IQ +G TI+ E ALW I+ +DTEK+ +L+K ++E H +P + PIHDQ +YL +K+L +E GV+ W Q LG+AVFIPAG PHQV NL SC KVA DFVSPE+V C LT+EFR L H EDKL++K +I +AV ++ L+A Sbjct: 977 VFRECWKQGQPVMVSGVHNNLNSELWRPESFRREFGDQEADLVNCRTNDIITGATVGD---------FWDGFEDIPGRLKNDTGESMVLKLKDWPPGEDFRDTMLSRFEDLMNNIPLPEYTR-REGKLNLAARLPTYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMVYVG-----------IPKGEH-------------------------DQDQEVLRTIQ-----------DGDADELTIKRFIEFKEKPGALWHIYAAKDTEKIRQFLKKVAEEEGHE--NPPDH--DPIHDQSWYLDNILRKRLLQEHGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFCLTQEFRYLSHTHTNHEDKLQVKNVIYHAVKDSIAILKA 1326
BLAST of Psat4g005560.1 vs. DB:Swiss
Match: JHD2C_HUMAN (Probable JmjC domain-containing histone demethylation protein 2C OS=Homo sapiens OX=9606 GN=JMJD1C PE=1 SV=2) HSP 1 Score: 151.754 bits (382), Expect = 5.495e-36 Identity = 122/409 (29.83%), Postives = 192/409 (46.94%), Query Frame = 1 Query: 1315 LFQKHWANGEPIIVRDVLKQGTGLSWEPMVMWRALCDNVGSVMSSKMSEVKAIDCMANCEVEINTRRFFKGYIE-GRTYRNLWPE--MLKLKDWPPSDKFEDLLPRHCDEFIHSLPFQQYTDPRAGILNLAVKLPAHVLKPDMGPKTYIAYGIREELGRGDSVTKLHCDMSDAVNILTHTAEVQLTDDQHSA-IPKLKEAHKTQDXXXXXXXXXXXXCLNSRLCDNREHENRPIQISGDMFRNDVSEGGNFAATIENETMVTGSALWDIFRREDTEKLGAYLRKHSKEFRHTYCSPIEEVVHPIHDQCFYXXXXXXXXXXXXFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAADFVSPENVHECLRLTEEFRQLPKNHKAREDKLEIKKMIVYAVDQALKDLE 2529 LF++ W G+P +V V K+ W+ + D+ ++ +C + N + F+ G+ E + +N E +LKLKDWP + F+ ++P ++ + SLP +Y +P G NLA LP ++PD+GP+ AYG+ T LH ++SD VNIL + + A I K E D L RL D+ E I G ALW I+ +D +K+ +L+K SKE + P + PI DQ +Y+ + +++L EE+GV T Q LG+A+ +PAG HQV+N SC +V DFVSPE++ E LT+E R L K +DKL++K ++ +AV + ++ L+ Sbjct: 2181 LFKECWKQGQPAVVSGVHKKMNISLWKAESISLDFGDHQADLL----------NCKDSIISNANVKEFWDGFEEVSKRQKNKSGETVVLKLKDWPSGEDFKTMMPARYEDLLKSLPLPEYCNPE-GKFNLASHLPGFFVRPDLGPRLCSAYGVVAAKDHDIGTTNLHIEVSDVVNILVYVGIAKGNGILSKAGILKKFEEEDLDD------------ILRKRLKDSSE-------IPG--------------------------ALWHIYAGKDVDKIREFLQKISKE-QGLEVLPEHD---PIRDQSWYVNKKLRQRLLEEYGVRTCTLIQFLGDAIVLPAGALHQVQNFHSCIQVTEDFVSPEHLVESFHLTQELRLL-KEEINYDDKLQVKNILYHAVKEMVRALK 2528 The following BLAST results are available for this feature:
BLAST of Psat4g005560.1 vs. DB:Swiss
Analysis Date: 2019-09-12 (BLAST: P. sativum Cameor genome v1a vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: P. sativum Cameor genome v1a
Date Performed: 2019-09-12
Sequences
The
following sequences are available for this feature:
mRNA sequence >Psat4g005560.1_Ps_Cameor_v1a ID=Psat4g005560.1_Ps_Cameor_v1a; Name=Psat4g005560.1; organism=Pisum sativum; type=mRNA; length=5645bpback to top protein sequence of Psat4g005560.1_Ps_Cameor_v1a >Psat4g005560.1_Ps_Cameor_v1a ID=Psat4g005560.1_Ps_Cameor_v1a; Name=Psat4g005560.1_Ps_Cameor_v1a; organism=Pisum sativum; type=polypeptide; length=850bpback to top mRNA from alignment at chr4LG4:5981796..5987440+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Psat4g005560.1_Ps_Cameor_v1a ID=Psat4g005560.1_Ps_Cameor_v1a; Name=Psat4g005560.1; organism=Pisum sativum; type=mRNA; length=5645bp; location=Sequence derived from: chr4LG4:5981796..5987440+ (Pisum sativumback to top Coding sequence (CDS) from alignment at chr4LG4:5981796..5987440+ >Psat4g005560.1_Ps_Cameor_v1a ID=Psat4g005560.1_Ps_Cameor_v1a; Name=Psat4g005560.1; organism=Pisum sativum; type=CDS; length=5100bp; location=Sequence derived from: chr4LG4:5981796..5987440+ (Pisum sativumback to top |