Psat4g007880.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Psat4g007880.1 vs. DB:Swiss
Match: PP251_ARATH (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H32 PE=3 SV=1) HSP 1 Score: 493.041 bits (1268), Expect = 1.555e-165 Identity = 253/608 (41.61%), Postives = 375/608 (61.68%), Query Frame = 1 Query: 148 YASLLQSCIDSKALNPGKQLHAHLCHLGIAYSEDLATKLVHLYA---------------------VSNS---------------LPNAHKLFDKIPKGNLFLWNVLIRGYAWNGPHDTAILLYHEMLDYGLKPDNFTLPFVLKACSALSAIGEGRGIHEYVIKNGWERDVFVGAALIDMYAKCGCVMDARHVFNNIVERDAVLWNSMLATYAQNGHPDESLSLCREMAAEGVKPTEATLVTVISSSADIACLPYGREIHGFGWKHGFQSNDKVKTALIDMYAKCGSVKVACALFERLWERRVVSWNAIITGYAMHGLAVEALDLFEKMRKEA-RPDHITFVGVLAACSRGRLLDEGRALYNSMVRDYGINPTVQHYTCMVDLLGHCGQLDEAYDLIRHMSVKPDSGVWGALLNSCKIHGNVXXXXXXXXXXXXXXPDDSGNYVILANMYAQSGKWEGVEKLRQLMIDKGIKKNIACSWIEVKNKVYAFLAGDVSHSNSDAIYAELKRLEGLMHEAGYAPDTGSVFHDVEEDEKTSMVCSHSERLAIAFGLISTSPGTRLLITKNLRVCEDCHVAIKFISKITEREITVRDVNRYHHFKHGMCLCGDHW 1860 + S+L+SC L G+ +H + LG+ L+++YA SNS + + ++F+ +P+ ++ +N +I GYA +G ++ A+ + EM LKPD+FTL VL S + +G+ IH YVI+ G + DV++G++L+DMYAK + D+ VF+ + RD + WNS++A Y QNG +E+L L R+M VKP +VI + A +A L G+++HG+ + GF SN + +AL+DMY+KCG++K A +F+R+ VSW AII G+A+HG EA+ LFE+M+++ +P+ + FV VL ACS L+DE +NSM + YG+N ++HY + DLLG G+L+EAY+ I M V+P VW LL+SC +H N+ELAE EK+ ++ ++ G YV++ NMYA +G+W+ + KLR M KG++K ACSWIE+KNK + F++GD SH + D I LK + M + GY DT V HDV+E+ K ++ HSERLA+AFG+I+T PGT + +TKN+R+C DCHVAIKFISKITEREI VRD +R+HHF G C CGD+W Sbjct: 108 FPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715 HSP 2 Score: 169.088 bits (427), Expect = 2.752e-43 Identity = 112/417 (26.86%), Postives = 200/417 (47.96%), Query Frame = 1 Query: 154 SLLQSCIDSKALNPGKQLHAHLCHLGIAYSEDLATKLVHLYAVSNSLPNAHKLFDKIPKGNLFLWNVLIRGYAWNGPHDTAILLYHEMLDYGLKPDNFTLPFVLKACSALSAIGEGRGIHEYVIKNGWERDVFVGAALIDMYAKC-------------------------------GCVM-----DARHVFNNIVERDAVLWNSMLATYAQNGHPDESLSLCREMAAEGVKPTEATLVTVISSSADIACLPYGREIHGFGWKHGFQSNDKVKTALIDMYAKCGSVKVACALFERLWERRVVSWNAIITGYAMHGLAVEALDLFEKM-RKEARPDHITFVGVLAACSRGRLLDEGRALYNSMVRDYGINPTVQHYTCMVDLLGHCGQLDEAYDLIRHMSVKPDSGVWGALLNSCKIHG 1293 +L+++ K+ + KQLHA + S A+ ++ +Y L A LF + + W +IR + A+ + EM G PD+ P VLK+C+ + + G +H ++++ G + D++ G AL++MYAK C+M R VF + +D V +N+++A YAQ+G +++L + REM +KP TL +V+ ++ + G+EIHG+ + G S+ + ++L+DMYAK ++ + +F RL+ R +SWN+++ GY +G EAL LF +M + +P + F V+ AC+ L G+ L+ ++R G + + +VD+ CG + A + M+V D W A++ +HG Sbjct: 10 TLIKNPTRIKSKSQAKQLHAQFIRTQ-SLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRG-GFGSNIFIASALVDMYSKCGNIKAARKIFDRMNV-LDEVSWTAIIMGHALHG 423
BLAST of Psat4g007880.1 vs. DB:Swiss
Match: PP265_ARATH (Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR2 PE=2 SV=1) HSP 1 Score: 475.322 bits (1222), Expect = 2.486e-159 Identity = 248/586 (42.32%), Postives = 375/586 (63.99%), Query Frame = 1 Query: 124 SPSQTSYGYASLLQSCIDSKALNPGKQLHAHLCHLGIAYSEDLATKLVHLYAVSNSLPNAHKLFDKIPKGNLFLWNVLIRGYAWNGPHDTAILLYHEMLDYGLKPDNFTLPFVLKACSA----LSAIGEGRGIHEYVIKNGWERDVFVGAALIDMYAKCGCVMDARHVFNNIVERDAVLWNSMLATYAQNGHPDESLSLCREMAAEG--VKPTEATLVTVISSSADIACLPYGREIHGFGWKHGFQSNDKVKTALIDMYAKCGSVKVACALFERLWERRVVSWNAIITGYAMHGLAVEALDLFEKMRKE-ARPDHITFVGVLAACSRGRLLDEGRALYNSMVRDYGINPTVQHYTCMVDLLGHCGQLDEAYDLIRHMSVKPDSGVWGALLNSCKIHGNVXXXXXXXXXXXXXXPDDSGNYVILANMYAQSGKWEGVEKLRQLMIDKGIKKNIACSWIEVKNKVYAFLAGDVSHSNSDAIYAELKRLEGLMHEAGYAPDTGSVFHDVEEDEKTSMVCSHSERLAIAFGLISTSPGTRLLITKNLRVCEDCHVAIKFISKITEREITVRDVNRYHHFKHGMCLCGDHW 1860 SPSQ +Y L+ C +L+ ++H H+ G LATKL+ +Y+ S+ A K+FDK K +++WN L R G + + LY +M G++ D FT +VLKAC A ++ + +G+ IH ++ + G+ V++ L+DMYA+ GCV A +VF + R+ V W++M+A YA+NG E+L REM E P T+V+V+ + A +A L G+ IHG+ + G S V +AL+ MY +CG ++V +F+R+ +R VVSWN++I+ Y +HG +A+ +FE+M A P +TFV VL ACS L++EG+ L+ +M RD+GI P ++HY CMVDLLG +LDEA +++ M +P VWG+LL SC+IHGNVELAE A +L LEP ++GNYV+LA++YA++ W+ V+++++L+ +G++K W+EV+ K+Y+F++ D + + I+A L +L M E GY P T V +++E +EK +V HSE+LA+AFGLI+TS G + ITKNLR+CEDCH+ KFISK E+EI VRDVNR+H FK+G+C CGD+W Sbjct: 74 SPSQQTYEL--LILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
BLAST of Psat4g007880.1 vs. DB:Swiss
Match: PP330_ARATH (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H28 PE=2 SV=2) HSP 1 Score: 468.774 bits (1205), Expect = 1.123e-157 Identity = 248/594 (41.75%), Postives = 372/594 (62.63%), Query Frame = 1 Query: 124 SP-SQTSYGYASLLQSCID------SKALNPGKQLHAHLCHLGIAYSEDLATKLVHLYAVSNSLPN----AHKLFDKIPKG-NLFLWNVLIRGYAWNGPHDTAILLYHEMLDYGL-KPDNFTLPFVLKACSALSAIGEGRGIHEYVIKNGWERDVFVGAALIDMYAKCGCVMDARHVFNNIVERDAVLWNSMLATYAQNGHPDESLSLCREMAAEGVKPTEATLVTVISSSADIACLPYGREIHGFGWKHGFQSNDKVKTALIDMYAKCGSVKVACALFERLWERRVVSWNAIITGYAMHGLAVEALDLFEKMRKEA--RPDHITFVGVLAACSRGRLLDEGRALYNSMVRDYGINPTVQHYTCMVDLLGHCGQLDEAYDLIRHMSVKPDSGVWGALLNSCKIHGNVXXXXXXXXXXXXXXPDDSGNYVILANMYAQSGKWEGVEKLRQLMIDKGIKKNIACSWIEVKNKVYAFLAGDVSHSNSDAIYAELKRLEGLMHEAGYAPDTGSVFHDVEEDEKTSMVCSHSERLAIAFGLISTSPGTRLLITKNLRVCEDCHVAIKFISKITEREITVRDVNRYHHFKHGMCLCGDHW 1860 SP S+TS +++ CI+ ++ +Q+HA G++ S+ K + Y VS P AHK+F KI K N+F+WN LIRGYA G +A LY EM GL +PD T PF++KA + ++ + G IH VI++G+ ++V +L+ +YA CG V A VF+ + E+D V WNS++ +A+NG P+E+L+L EM ++G+KP T+V+++S+ A I L G+ +H + K G N L+D+YA+CG V+ A LF+ + ++ VSW ++I G A++G EA++LF+ M P ITFVG+L ACS ++ EG + M +Y I P ++H+ CMVDLL GQ+ +AY+ I+ M ++P+ +W LL +C +HG+ +LAE A ++++LEP+ SG+YV+L+NMYA +W V+K+R+ M+ G+KK S +EV N+V+ FL GD SH SDAIYA+LK + G + GY P +V+ DVEE+EK + V HSE++AIAF LIST + + + KNLRVC DCH+AIK +SK+ REI VRD +R+HHFK+G C C D+W Sbjct: 2 SPFSETSVLLLPMVEKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
BLAST of Psat4g007880.1 vs. DB:Swiss
Match: PP227_ARATH (Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H85 PE=3 SV=1) HSP 1 Score: 462.611 bits (1189), Expect = 9.040e-155 Identity = 223/581 (38.38%), Postives = 363/581 (62.48%), Query Frame = 1 Query: 127 PSQTSYGYASLLQSCIDSKALNPGKQLHAHLCHLGIAYSEDLATKLVHLYAVSNSLPNAHKLFDKIPKGNLFLWNVLIRGYAWNGPHDTAILLYHEMLDYGLKPDNFTLPFVLKACSALSAIGEGRGIHEYVIKNGWERDVFVGAALIDMYAKCGCVMDARHVFNNIVERDAVLWNSMLATYAQNGHPDESLSLCREMAAEGVKPTEATLVTVISSSADIACLPYGREIHGFGWKHGFQSNDKVKTALIDMYAKCGSVKVACALFERLWERRVVSWNAIITGYAMHGLAVEALDLFEKMRKEAR--PDHITFVGVLAACSRGRLLDEGRALYNSMVR-DYGINPTVQHYTCMVDLLGHCGQLDEAYDLIRHMSVKPDSGVWGALLNSCKIHGNVXXXXXXXXXXXXXXPDDSGNYVILANMYAQSGKWEGVEKLRQLMIDKGIKKNIACSWIEVKNKVYAFLAGDVSHSNSDAIYAELKRLEGLMHEAGYAPDTGSVFHDVEEDEKTSMVCSHSERLAIAFGLISTSPGTRLLITKNLRVCEDCHVAIKFISKITEREITVRDVNRYHHFKHGMCLCGDHW 1860 P +GY +LL +C+D +AL G+++HAH+ + L T+L+ Y + L +A K+ D++P+ N+ W +I Y+ G A+ ++ EM+ KP+ FT VL +C S +G G+ IH ++K ++ +FVG++L+DMYAK G + +AR +F + ERD V +++A YAQ G +E+L + + +EG+ P T +++++ + +A L +G++ H + ++ +LIDMY+KCG++ A LF+ + ER +SWNA++ GY+ HGL E L+LF MR E R PD +T + VL+ CS GR+ D G +++ MV +YG P +HY C+VD+LG G++DEA++ I+ M KP +GV G+LL +C++H +V++ E +LIE+EP+++GNYVIL+N+YA +G+W V +R +M+ K + K SWI+ + ++ F A D +H + + A++K + M +AGY PD V +DV+E++K M+ HSE+LA+ FGLI+T G + + KNLR+C DCH K SK+ ERE+++RD NR+H G+C CGD+W Sbjct: 48 PEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
BLAST of Psat4g007880.1 vs. DB:Swiss
Match: PP172_ARATH (Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H60 PE=2 SV=1) HSP 1 Score: 469.929 bits (1208), Expect = 1.499e-154 Identity = 243/575 (42.26%), Postives = 366/575 (63.65%), Query Frame = 1 Query: 148 YASLLQSCIDSKALNPGKQLHAHLCHLGIAYSEDLATKLVHLYAVSNSLPNAHKLFDKIP-KGNLFLWNVLIRGYAWNGPHDTAILLYHEMLDYGLKPDNFTLPFVLKACSALSAIGEGRGIHEYVIKNGWERDVFVGAALIDMYAKCGCVMDARHVFNNIVERDAVLWNSMLATYAQNGHPDESLSLCREMAAEGVKPTEATLVTVIS-SSADIACLPYGREIHGFGWKHGFQSNDKVKTALIDMYAKCGSVKVACALFERLWERRVVSWNAIITGYAMHGLAVEALDLFEKMRK-EARPDHITFVGVLAACSRGRLLDEGRALYNSMVRDYGINPTVQHYTCMVDLLGHCGQLDEAYDLIRHMSVKPDSGVWGALLNSCKIHGNVXXXXXXXXXXXXXXPDDSGNYVILANMYAQSGKWEGVEKLRQLMIDKGIKKNIACSWIEVKNKVYAFLAGDVSHSNSDAIYAELKRLEGLMHEAGYAPDTGSVFHDVEEDEKTSMVCSHSERLAIAFGLISTSPGTRLLITKNLRVCEDCHVAIKFISKITEREITVRDVNRYHHFKH-GMCLCGDHW 1860 +AS+++ C + K L +QLH + G + +++ T L+ Y+ ++ +A +LF +I GN+ W +I G+ N + A+ L+ EM G++P+ FT +L A +S +H V+K +ER VG AL+D Y K G V +A VF+ I ++D V W++MLA YAQ G + ++ + E+ G+KP E T ++++ +A A + G++ HGF K S+ V +AL+ MYAK G+++ A +F+R E+ +VSWN++I+GYA HG A++ALD+F++M+K + + D +TF+GV AAC+ L++EG ++ MVRD I PT +H +CMVDL GQL++A +I +M S +W +L +C++H EL LA EK+I ++P+DS YV+L+NMYA+SG W+ K+R+LM ++ +KK SWIEVKNK Y+FLAGD SH D IY +L+ L + + GY PDT V D++++ K +++ HSERLAIAFGLI+T G+ LLI KNLRVC DCH+ IK I+KI EREI VRD NR+HHF G+C CGD W Sbjct: 298 FASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868 HSP 2 Score: 177.948 bits (450), Expect = 6.194e-46 Identity = 110/361 (30.47%), Postives = 185/361 (51.25%), Query Frame = 1 Query: 196 GKQLHAHLCHLGIAYSEDLATKLVHLYAVSNSLPNAHKLFDKIPKGNLFLWNVLIRGYAWNGPHDTAILLYHEMLDYGLKPDNFTLPFVLKACSALSAIGEGRGIHEYVIKNGWERDVFVGAALIDMYAKCGCVMDARHVFNNIVERDAVLWNSMLATYAQNGHPDESLSLCREMAAEGVKPTEATLVTVISSSADIACLPYGREIHGFGWKHGFQSNDKVKTALIDMYAKCGSVKVACALFERLW-ERRVVSWNAIITGYAMHGLAVEALDLFEKM-RKEARPDHITFVGVLAACSRGRLLDEGRALYNSMVRDYGINPTVQHYTCMVDLLGHCGQLDEAYDLIRHMSVKPDSGVWGALL 1272 G+QLH G + T LV Y ++ + K+FD++ + N+ W LI GYA N +D + L+ M + G +P++FT L + G G +H V+KNG ++ + V +LI++Y KCG V AR +F+ + V WNSM++ YA NG E+L + M V+ +E++ +VI A++ L + ++H K+GF + ++TAL+ Y+KC ++ A LF+ + VVSW A+I+G+ + EA+DLF +M RK RP+ T+ +L A ++ + +Y + TV T ++D G+++EA + + K D W A+L Sbjct: 112 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP---VISPSEVHAQVVKTNYERSSTVG--TALLDAYVKLGKVEEAAKVFSGIDDK-DIVAWSAML 466 HSP 3 Score: 159.458 bits (402), Expect = 9.606e-40 Identity = 103/332 (31.02%), Postives = 166/332 (50.00%), Query Frame = 1 Query: 283 SNSLPNAHKLFDKIPKGNLFLWNVLIRGYAWNGPHDTAILLYHEMLDYGLKPDNFTLPFVLKACSALSAIGEGRGIHEYVIKNGWERDVFVGAALIDMYAKCGCVMDARHVFNNIVERDAVLWNSMLATYAQNGHPDESLSLCREMAAEGVKPTEATLVTVISSSADIACLPYGREIHGFGWKHGFQSNDKVKTALIDMYAKCGSVKVACALFERLWERRVVSWNAIITGYAMHGLAVEALDLFEKMR-KEARPDHITFVGVLAACSRGRLLDEGRALYNSMVRDYGINPTVQHYTCMVDLLGHCGQLDEAYDLIRHMSVKPDSGVWGALLN 1275 S+ L NAH LFDK P + + L+ G++ +G A L+ + G++ D VLK + L GR +H IK G+ DV VG +L+D Y K D R VF+ + ER+ V W ++++ YA+N DE L+L M EG +P T + A+ G ++H K+G V +LI++Y KCG+V+ A LF++ + VV+WN++I+GYA +GL +EAL +F MR R +F V+ C+ + L L+ S+V+ YG T ++ C + +A L + + + W A+++ Sbjct: 40 SSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVK-YGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMIS 370 HSP 4 Score: 144.436 bits (363), Expect = 8.945e-35 Identity = 95/389 (24.42%), Postives = 192/389 (49.36%), Query Frame = 1 Query: 139 SYGYASLLQSCIDSKALNPGKQLHAHLCHLGIAYSEDLATKLVHLYAVSNSLPNAHKLFDKIPKGNLFLWNVLIRGYAWNGPHDTAILLYHEMLDYGLKPDNFTLPFVLKACSALSAIGEGRGIHEYVIKNGWERDVFVGAALIDMYAKCGCVMDARHVFNNI-VERDAVLWNSMLATYAQNGHPDESLSLCREMAAEGVKPTEATLVTVISSSADIACLPYGREIHGFGWKHGFQSNDKVKTALIDMYAKCGSVKVACALFERLWERRVVSWNAIITGYAMHGLAVEALDLFEKMRKEA-RPDHITFVGVLAACSRGRL-LDEGRALYNSMVRDYGINPTVQHYTCMVDLLGHCGQLDEAYDLIRHMSVKPDSGVWGALLNSCKIHGN 1296 S+ +A+ L + G Q+H + G+ + ++ L++LY ++ A LFDK ++ WN +I GYA NG A+ +++ M ++ + V+K C+ L + +H V+K G+ D + AL+ Y+KC ++DA +F I + V W +M++ + QN +E++ L EM +GV+P E T ++++ I+ E+H K ++ + V TAL+D Y K G V+ A +F + ++ +V+W+A++ GYA G A+ +F ++ K +P+ TF +L C+ + +G+ + ++ ++ ++ + ++ + G ++ A ++ + K D W ++++ HG Sbjct: 194 SFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVIS----PSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSR-LDSSLCVSSALLTMYAKKGNIESAEEVFKRQREK-DLVSWNSMISGYAQHGQ 576
BLAST of Psat4g007880.1 vs. DB:Swiss
Match: PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1) HSP 1 Score: 459.144 bits (1180), Expect = 6.156e-152 Identity = 244/608 (40.13%), Postives = 368/608 (60.53%), Query Frame = 1 Query: 139 SYGYASLLQSCIDSKALNPGKQLHAHLCHLGIAYSEDLATKLVHLYAVSNSLPNAHKLFDK-------------------------------IPKGNLFLWNVLIRGYAWNGPHDTAILLYHEMLDYGLKPDNFTLPFVLKACSALSAIGEGRGIHEYVIKNGWERDVFVGAALIDMYAKCGCVMDARHVFNNIVERDAVLWNSMLATYAQNGHPDESLSLCREMAAEGVKPTEATLVTVISSSADIACLPYGREIHGFGWKH--GFQSNDKVKTALIDMYAKCGSVKVACALFERLWERRVVSWNAIITGYAMHGLAVEALDLFEKMRKEA-RPDHITFVGVLAACSRGRLLDEGRALYNSMVRDYGINPTVQHYTCMVDLLGHCGQLDEAYDLIRHMSVKPDSGVWGALLNSCKIHGNVXXXXXXXXXXXXXXPDDSGNYVILANMYAQSGKWEGVEKLRQLMIDKGIKKNIACSWIEVKNKVYAFLAGDVSHSNSDAIYAELKRLEGLMHEAGYAPDTGSVFHDVEEDEKTSMVCSHSERLAIAFGLISTSPGTRLLITKNLRVCEDCHVAIKFISKITEREITVRDVNRYHHFKHGMCLCGDHW 1860 SY + +L+SC SKA G+Q+H H+ LG + T L+ +Y + L +AHK+FDK IP ++ WN +I GYA G + A+ L+ +M+ ++PD T+ V+ AC+ +I GR +H ++ +G+ ++ + ALID+Y+KCG + A +F + +D + WN+++ Y E+L L +EM G P + T+++++ + A + + GR IH + K G + ++T+LIDMYAKCG ++ A +F + + + SWNA+I G+AMHG A + DLF +MRK +PD ITFVG+L+ACS +LD GR ++ +M +DY + P ++HY CM+DLLGH G EA ++I M ++PD +W +LL +CK+HGNVEL E E LI++EP++ G+YV+L+N+YA +G+W V K R L+ DKG+KK CS IE+ + V+ F+ GD H + IY L+ +E L+ +AG+ PDT V ++EE+ K + HSE+LAIAFGLIST PGT+L I KNLRVC +CH A K ISKI +REI RD R+HHF+ G+C C D+W Sbjct: 134 SYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741 HSP 2 Score: 231.491 bits (589), Expect = 2.811e-65 Identity = 146/444 (32.88%), Postives = 233/444 (52.48%), Query Frame = 1 Query: 79 PSS---YHSLATQQFDSCSPSQTSYGYASLLQSCIDSKALNPGKQLHAHLCHLGIAYSEDLATKLVHLYAVS---NSLPNAHKLFDKIPKGNLFLWNVLIRGYAWNGPHDTAILLYHEMLDYGLKPDNFTLPFVLKACSALSAIGEGRGIHEYVIKNGWERDVFVGAALIDMYAKCGCVMDARHVFNN-------------------------------IVERDAVLWNSMLATYAQNGHPDESLSLCREMAAEGVKPTEATLVTVISSSADIACLPYGREIHGFGWKHGFQSNDKVKTALIDMYAKCGSVKVACALFERLWERRVVSWNAIITGYAMHGLAVEALDLFEKM-RKEARPDHITFVGVLAACSRGRLLDEGRALYNSM-VRDYGINPTVQHYTCMVDLLGHCGQLDEAYDLIRHMSVKPDSGVWGALLNSCKIHG 1293 PSS +H L + D S ++ SLL +C K L + +HA + +G+ + +KL+ +S LP A +F I + NL +WN + RG+A + +A+ LY M+ GL P+++T PFVLK+C+ A EG+ IH +V+K G + D++V +LI MY + G + DA VF+ I +D V WN+M++ YA+ G+ E+L L ++M V+P E+T+VTV+S+ A + GR++H + HGF SN K+ ALID+Y+KCG ++ AC LFERL + V+SWN +I GY L EAL LF++M R P+ +T + +L AC+ +D GR ++ + R G+ T ++D+ CG ++ A+ + + K S W A++ +HG Sbjct: 11 PSSSYPFHFLPSSS-DPPYDSIRNHPSLSLLHNC---KTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSS-WNAMIFGFAMHG 449
BLAST of Psat4g007880.1 vs. DB:Swiss
Match: PPR32_ARATH (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1) HSP 1 Score: 460.299 bits (1183), Expect = 1.374e-151 Identity = 239/570 (41.93%), Postives = 360/570 (63.16%), Query Frame = 1 Query: 154 SLLQSCIDSKALNPGKQLHAHLCHLGIAYSEDLATKLVHLYAVSNSLPNAHKLFDKIPKGNLFLWNVLIRGYAWNGPHDTAILLYHEMLDYGLKPDNFTLPFVLKACSALSAIGEGRGIHEYVIKNGWERDVFVGAALIDMYAKCGCVMDARHVFNNIVERDAVLWNSMLATYAQNGHPDESLSLCREMAAEGVKPTEATLVTVISSSADIACLPYGREIHGFGWKHGFQSNDKVKTALIDMYAKCGSVKVACALFERLWERRVVSWNAIITGYAMHGLAVEALDLFEKMRK-EARPDHITFVGVLAACSRGRLLDEGRALYNSMVRDYGINPTVQHYTCMVDLLGHCGQLDEAYDLIRHMSVKPDSGVWGALLNSCKIHGNVXXXXXXXXXXXXXXPDDSGNYVILANMYAQSGKWEGVEKLRQLMIDKGIKKNIACSWIEVKNKVYAFLAGDVSHSNSDAIYAELKRLEGLMHEAGYAPDTGSVFHDVEEDEKTSMVCSHSERLAIAFGLISTSPGTRLLITKNLRVCEDCHVAIKFISKITEREITVRDVNRYHHFKHGMCLCGDHW 1860 S+L + + ++ GK++H + G +++T LV +YA SL A +LFD + + N+ WN +I Y N A+L++ +MLD G+KP + ++ L AC+ L + GR IH+ ++ G +R+V V +LI MY KC V A +F + R V WN+M+ +AQNG P ++L+ +M + VKP T V+VI++ A+++ + + IHG + N V TAL+DMYAKCG++ +A +F+ + ER V +WNA+I GY HG AL+LFE+M+K +P+ +TF+ V++ACS L++ G + M +Y I ++ HY MVDLLG G+L+EA+D I M VKP V+GA+L +C+IH NV AE A E+L EL PDD G +V+LAN+Y + WE V ++R M+ +G++K CS +E+KN+V++F +G +H +S IYA L++L + EAGY PDT V VE D K ++ +HSE+LAI+FGL++T+ GT + + KNLRVC DCH A K+IS +T REI VRD+ R+HHFK+G C CGD+W Sbjct: 241 SVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809 HSP 2 Score: 246.899 bits (629), Expect = 1.758e-70 Identity = 135/396 (34.09%), Postives = 218/396 (55.05%), Query Frame = 1 Query: 109 QFDSCSPSQTSYGYASLLQSCIDSKALNPGKQLHAHLCHLGIAYSEDLATKLVHLYAVSNSLPNAHKLFDKIPKGNLFLWNVLIRGYAWNGPHDTAILLYHEMLDYGLKPDNFTLPFVLKACSALSAIGEGRGIHEYVIKNGWERDVFVGAALIDMYAKCGCVMDARHVFNNIVERDAVLWNSMLATYAQNGHPDESLSLCREMAAEGVKPTEATLVTVISSSADIACLPYGREIHGFGWKHGFQSNDKVKTALIDMYAKCGSVKVACALFERLWERRVVSWNAIITGYAMHGLAVEALDLFEKMR-KEARPDHITFVGVLAACSRGRLLDEGRALYNSMVRDYGINPTVQHYTCMVDLLGHCGQLDEAYDLIRHMSVKPDSGVWGALLNSCKIHG 1293 ++D P Y + LL+ C D L GK++H L G + T L ++YA + A K+FD++P+ +L WN ++ GY+ NG A+ + M + LKP T+ VL A SAL I G+ IH Y +++G++ V + AL+DMYAKCG + AR +F+ ++ER+ V WNSM+ Y QN +P E++ + ++M EGVKPT+ +++ + + AD+ L GR IH + G N V +LI MY KC V A ++F +L R +VSWNA+I G+A +G ++AL+ F +MR + +PD T+V V+ A + + + ++ ++R ++ V T +VD+ CG + A LI M + W A+++ HG Sbjct: 127 RYDDVEP--VVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRS-CLDKNVFVTTALVDMYAKCGAIMIA-RLIFDMMSERHVTTWNAMIDGYGTHG 518 HSP 3 Score: 203.371 bits (516), Expect = 6.787e-55 Identity = 118/383 (30.81%), Postives = 205/383 (53.52%), Query Frame = 1 Query: 79 PSSYHSLATQQFDSCSPSQTSYGYASLLQSCIDSKALNPGKQLHAHLCHLGIAYSEDLATKLVHLYAVSNSLPNAHKLFDKIPKGNLFLWNVLIRGYAWNGPHDTAILLYHEMLDYGLKPDNFTLPFVLKACSALSAIGEGRGIHEYVIKNGWERDVFVGAALIDMYAKCGCVMDARHVFNNIVERDAVLWNSMLATYAQNGHPDESLSLCREMAAEGVKPTEATLVTVISSSADIACLPYGREIHGFGWKHGFQSNDKVKTALIDMYAKCGSVKVACALFERLWERRVVSWNAIITGYAMHGLAVEALDLFEKMRKEA-RPDHITFVGVLAACSRGRLLDEGRALYNSMVRDYGINPTVQHYTCMVDLLGHCGQLDEAYDLI 1224 P S H + + + + A LL+ C K L +Q+ + G+ TKLV L+ S+ A ++F+ I L++ +++G+A D A+ + M ++P + ++LK C + + G+ IH ++K+G+ D+F L +MYAKC V +AR VF+ + ERD V WN+++A Y+QNG +L + + M E +KP+ T+V+V+ + + + + G+EIHG+ + GF S + TAL+DMYAKCGS++ A LF+ + ER VVSWN++I Y + EA+ +F+KM E +P ++ +G L AC+ L+ GR ++ V + G++ V ++ + C ++D A + Sbjct: 17 PPSRHRHFLSERNYIPANVYEHPAALLLERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSV-ELGLDRNVSVVNSLISMYCKCKEVDTAASMF 395
BLAST of Psat4g007880.1 vs. DB:Swiss
Match: PPR53_ARATH (Pentatricopeptide repeat-containing protein At1g20230 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H21 PE=2 SV=2) HSP 1 Score: 451.055 bits (1159), Expect = 1.442e-148 Identity = 246/645 (38.14%), Postives = 353/645 (54.73%), Query Frame = 1 Query: 139 SYGYASLLQSCIDSKALNPGKQLHAHLCHLGIAYSEDLATKLVHLYAVSNSLPNAHKLFDKIP-----------------------------------KGNLFLWNVLIRGYAWNGPHDTAILLYHEMLDYGLKPDNFTLPFVLKACSALSAIGEGRGIHEYVIKNGWERDVFVGAALIDMYAKCGCVMDARHVFNNI-----------------------------------VERDAVLWNSMLATYAQNGHPDESLSLCREMAAEGVKPTEATLVTVISSSADIACLPYGREIHGFGWKHGFQSNDKVKTALIDMYAKCGSVKVACALFERLWERRVVSWNAIITGYAMHGLAVEALDLFEK-MRKEARPDHITFVGVLAACSRGRLLDEGRALYNSMVRDYGINPTVQHYTCMVDLLGHCGQLDEAYDLIRHMSVKPDSGVWGALLNSCKIHGNVXXXXXXXXXXXXXXPDDSGNYVILANMYAQSGKWEGVEKLRQLMIDKGIKKNIACSWIEVKNKVYAFLAGDVSHSNSDAIYAELKRLEGLMHEAGYAPDTGSVFHDVEEDEKTSMVCSHSERLAIAFGLISTSPGTRLLITKNLRVCEDCHVAIKFISKITEREITVRDVNRYHHFKHGMCLCGDHW 1860 S+ +L + C + A GKQ+H C G+ + + H+Y + +A K+FD++ + N+ WN ++ G+ +G H A++++ ++ G PD T+ VL + + GR IH YVIK G +D V +A+IDMY K G V +FN +E + V W S++A AQNG E+L L REM GVKP T+ +++ + +IA L +GR HGF + N V +ALIDMYAKCG + ++ +F + + +V WN+++ G++MHG A E + +FE MR +PD I+F +L+AC + L DEG + M +YGI P ++HY+CMV+LLG G+L EAYDLI+ M +PDS VWGALLNSC++ NV+LAE+A EKL LEP++ G YV+L+N+YA G W V+ +R M G+KKN CSWI+VKN+VY LAGD SH D I ++ + M ++G+ P+ HDVEE E+ M+ HSE+LA+ FGL++T GT L + KNLR+C DCH IKFIS REI +RD NR+HHFK G+C CGD W Sbjct: 116 SHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760 HSP 2 Score: 162.155 bits (409), Expect = 7.829e-41 Identity = 115/435 (26.44%), Postives = 192/435 (44.14%), Query Frame = 1 Query: 202 QLHAHLCHLGIAYSEDLATKLVHLYAVSNSLPNAHKLFDKIPKGNLFLWNVLIRGYAWNGPHDTAILLYHEMLDYGLKPDNFTLPFVLKACSALSAIGEGRGIHEYVIKNGWERDVFVGAALIDMYAKCGCVMDARHVFNNIVERDAVLWNSMLATYAQNGHPDESLSLCREMAAEGVK-----------------------------------PTEATLVTVISSSADIACLPYGREIHGFGWKHGFQSNDKVKTALIDMYAKCGSVKVACALF-----------------------------------ERLWERRVVSWNAIITGYAMHGLAVEALDLFEKMRKEA-RPDHITFVGVLAACSRGRLLDEGRALYNSMVRDYGINPTVQHYTCMVDLLGHCGQLDEAYDLIRHMSVKPDSGVWGALLNSCKIHG 1293 Q HA + G ++ KL+ Y+ N +A + IP ++ ++ LI +I ++ M +GL PD+ LP + K C+ LSA G+ IH +G + D FV ++ MY +CG + DAR VF+ + ++D V +++L YA+ G +E + + EM + G++ P + T+ +V+ S D L GR IHG+ K G + V +A+IDMY K G V +LF E+ E VVSW +II G A +G +EAL+LF +M+ +P+H+T +L AC L GR+ + VR + ++ V + ++D+ CG+++ + + M K + W +L+N +HG Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLD-NVHVGSALIDMYAKCGRINLSQIVFNMMPTK-NLVCWNSLMNGFSMHG 468
BLAST of Psat4g007880.1 vs. DB:Swiss
Match: PP348_ARATH (Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana OX=3702 GN=EMB2758 PE=3 SV=2) HSP 1 Score: 452.21 bits (1162), Expect = 2.725e-148 Identity = 242/577 (41.94%), Postives = 353/577 (61.18%), Query Frame = 1 Query: 139 SYGYASLLQSCIDSKALNPGKQLHAHLCHLGIAYSEDLATKLVHLYAVSNSLPNAHKLFDKIPKGNLFLWNVLIRGYAWNGPHDTAILLYHEMLDYGLKPDNFTLPFVLKACSALSAIGEGRGIHEYVIKNGW-ERDVFVGAALIDMYAKCGCVMDARHVFNNIVERDAVLWNSMLATYAQNGHPDESLSLCREMAAEG-VKPTEATLVTVISSSADIACLPYGREIHGFGWKHGFQSNDKVKTALIDMYAKCGSVKVACALFERLWERRVVSWNAIITGYAMHGLAVEALDLFEKMRKEA-RPDHITFVGVLAACSRGRLLDEGRALYNSMVRDYGINPTVQHYTCMVDLLGHCGQLDEAYDLIRHMSVKPDSGVWGALLNSCKIHGNVXXXXXXXXXXXXXXPDDSGNYVILANMYAQSGKWEGVEKLRQLMIDKGIKKNIACSWIEVKNKVYAFLAGDVSHSNSDAIYAELKRLEGLMHEAGYAPDTGSVFHDVEEDEKTSMVCSHSERLAIAFGLISTSPGTRLLITKNLRVCEDCHVAIKFISKITEREITVRDVNRYHHFKHGMCLCGDHW 1860 S SLL +C ++ N G +H++ G+ ++ KL+ LYA L + K+FD++ +L WN +I+ Y N AI L+ EM ++PD TL + S L I R + + ++ GW D+ +G A++ MYAK G V AR VFN + D + WN++++ YAQNG E++ + M EG + + T V+V+ + + L G ++HG K+G + V T+L DMY KCG ++ A +LF ++ V WN +I + HG +A+ LF++M E +PDHITFV +L+ACS L+DEG+ + M DYGI P+++HY CMVD+ G GQL+ A I+ MS++PD+ +WGALL++C++HGNV+L ++A E L E+EP+ G +V+L+NMYA +GKWEGV+++R + KG++K S +EV NKV F G+ +H + +Y EL L+ + GY PD V DVE+DEK ++ SHSERLAIAF LI+T T + I KNLRVC DCH KFISKITEREI VRD NR+HHFK+G+C CGD+W Sbjct: 247 SVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823 HSP 2 Score: 200.675 bits (509), Expect = 8.179e-54 Identity = 123/387 (31.78%), Postives = 208/387 (53.75%), Query Frame = 1 Query: 148 YASLLQSCIDSKALNPGKQLHAHLCHLGIAYSEDLATKLVHLYAVSNSLPNAHKLFDKIPKGNLFLWNVLIRGYAWNGPHDTAILLYHEMLDYGLKP-DNFTLPFVLKACSALSAIGEGRGIHEYVIKNGWERDVFVGAALIDMYAKCGCVMDARHVFNNIVERDAVLWNSMLATYAQNGHPDESLSLCREMAAEGVKPTEATLVTVISSSADIACLPYGREIHGFGWKHG-FQSNDKVKTALIDMYAKCGSVKVACALFERLWERRVVSWNAIITGYAMHGLAVEALDLFEKMRKEAR--PDHITFVGVLAACSRGRLLDEGRALYNSMVRDYGINPTVQHYTCMVDLLGHCGQLDEAYDLIRHMSVKPDSGVWGALLNSCKIHGN 1296 + S+L++C + + G ++H G + +A L+HLY+ ++ NA LFD++P ++ WN +I GY +G A+ L + GL+ D+ T+ +L AC+ G IH Y IK+G E ++FV LID+YA+ G + D + VF+ + RD + WNS++ Y N P ++SL +EM ++P TL+++ S + + + R + GF + G F + + A++ MYAK G V A A+F L V+SWN II+GYA +G A EA++++ M +E + T+V VL ACS+ L +G L+ ++++ G+ V T + D+ G CG+L++A L + + +S W L+ HG+ Sbjct: 156 FPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSN-----GLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKN-GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLIACHGFHGH 532 HSP 3 Score: 161.77 bits (408), Expect = 1.581e-40 Identity = 100/313 (31.95%), Postives = 171/313 (54.63%), Query Frame = 1 Query: 154 SLLQSCIDSKALNPGKQLHAHLCHLGIAYSEDLATKLVHLYAVSNSLPNAHKLFDKIPKGNLFLWNVLIRGYAWNGPHDTAILLYHE-MLDYGLKPDNFTLPFVLKACSALSAIGEGRGIHEYVIKNGWERDVFVGAALIDMYAKCGCVMDARHVFNNIVERDAVLWNSMLATYAQNGHPDESLSLCREMAAEGVKPTEA-TLVTVISSSADIACLPYGREIHGFGWKHGFQSNDKVKTALIDMYAKCGSVKVACALFERLWERRVVSWNAIITGYAMHGLAVEALDLFEKMR-KEARPDHITFVGVLAACSR 1083 +L + C + L K LHA L + ++ KLV+LY ++ A FD I +++ WN++I GY G I + ML GL PD T P VLKAC + +G IH +K G+ DV+V A+LI +Y++ V +AR +F+ + RD WN+M++ Y Q+G+ E+L+L + G++ ++ T+V+++S+ + G IH + KHG +S V LID+YA+ G ++ +F+R++ R ++SWN+II Y ++ + A+ LF++MR +PD +T + + + S+ Sbjct: 59 TLFRYCTN---LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL-----SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQ 360 HSP 4 Score: 102.064 bits (253), Expect = 3.369e-21 Identity = 81/330 (24.55%), Postives = 157/330 (47.58%), Query Frame = 1 Query: 460 VLKACSALSAIGEGRGIHEYVIKNGWERDVFVGAALIDMYAKCGCVMDARHVFNNIVERDAVLWNSMLATYAQNGHPDESLS-LCREMAAEGVKPTEATLVTVISSSADIACLPYGREIHGFGWKHGFQSNDKVKTALIDMYAKCGSVKVACALFERLWERRVVSWNAIITGYAMHGLAVEALDLFEKMRKEARPDHITFVGVLAACSRGRLLDEGRALYNSMVRDYGINPTVQHYTCMVDLLGHCGQLDEAYDLIRHMSVKPDSGVWGALLNSCKIHGN-VXXXXXXXXXXXXXXPDDSGNYVILANMYAQSGKWEGVEKLRQLMIDKG 1443 + + C+ L + + +H ++ + ++V + A L+++Y G V ARH F++I RD WN M++ Y + G+ E + M + G+ P T +V+ + + G +IH K GF + V +LI +Y++ +V A LF+ + R + SWNA+I+GY G A EAL L +R D +T V +L+AC+ + G +++ ++ +G+ + ++DL G+L + + M V+ D W +++ + +++ + L E + D + LA++ +Q G ++ + KG Sbjct: 60 LFRYCTNLQS---AKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVI---DGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRA---MDSVTVVSLLSACTEAGDFNRGVTIHSYSIK-HGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVR-DLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKG 378
BLAST of Psat4g007880.1 vs. DB:Swiss
Match: PP258_ARATH (Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H34 PE=2 SV=1) HSP 1 Score: 446.817 bits (1148), Expect = 3.097e-148 Identity = 248/591 (41.96%), Postives = 363/591 (61.42%), Query Frame = 1 Query: 118 SCSPSQTSYGYASLLQSCIDSKALNPGKQLHAHLCHLGIAYSEDLATKLVHLYAVSNSLPNAHKLFDKIPKGNLFLWNVLIRGYAWNGPHDTAILLYHEML------DYGLKPDNFTLPFVLKACSALSAIGEGRGIHEYVIKNGWERDVFVGAALIDMYAKCG--CVMDARHVFNNIVERDAVLWNSMLATYAQNGHPDESLSLCREMAAEGVKPTEA-TLVTVISSSADIACLPYGREIHGFGWKHGFQSNDKVKTALIDMYAKCGSVKVACALFERLWERRVVSWNAIITGYAMHGLAVEALDLFEKMRKEA-RPDHITFVGVLAACSRGRLLDEGRALYNSMVRDYGINPTVQHYTCMVDLLGHCGQLDEAYDLIRHMSVKPDSGVWGALLNSCKIHGNVXXXXXXXXXXXXXXPDDSGNYVILANMYAQSGKWEGVEKLRQLMIDKGIKKNIACSWIEVKNKVYAFLAGDVSHSNSDAIYAELKRLEGLMHEAGYAPDTGSVFHDVEEDEKTSMVCSHSERLAIAFGLISTSPGTRLLITKNLRVCEDCHVAIKFISKITEREITVRDVNRYHHFKHGMCLCGDHW 1860 S P+++S+ A +++C + GKQ H G +++ L+ +Y+ L +A K+FD+IPK N+ W +IRGY NG A+ L+ ++L D + D+ L V+ ACS + A G IH +VIK G++R V VG L+D YAK G V AR +F+ IV++D V +NS+++ YAQ+G +E+ + R + V A TL TV+ + + L G+ IH + G + + V T++IDMY KCG V+ A F+R+ + V SW A+I GY MHG A +AL+LF M RP++ITFV VLAACS L EG +N+M +G+ P ++HY CMVDLLG G L +AYDLI+ M +KPDS +W +LL +C+IH NVELAE+++ +L EL+ + G Y++L+++YA +G+W+ VE++R +M ++G+ K S +E+ +V+ FL GD H + IY L L + EAGY +T SV HDV+E+EK + HSE+LAIAFG+++T PG+ + + KNLRVC DCH IK ISKI +RE VRD R+HHFK G C CGD+W Sbjct: 71 SLYPTRSSFPCA--IKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659 HSP 2 Score: 166.392 bits (420), Expect = 1.497e-42 Identity = 107/346 (30.92%), Postives = 185/346 (53.47%), Query Frame = 1 Query: 298 NAHKLFDK-IPKGNLFLWNVLIRGYAWNGPHDTAILLYHEMLDYGLKPDNFTLPFVLKACSALSAIGEGRGIHEYVIKNGWERDVFVGAALIDMYAKCGCVMDARHVFNNIVERDAVLWNSMLATYAQNGHPDESLSLCREMAAEGVKPTEAT------LVTVISSSADIACLPYGREIHGFGWKHGFQSNDKVKTALIDMYAKCGS--VKVACALFERLWERRVVSWNAIITGYAMHGLAVEALDLFEKMRKE--ARPDHITFVGVLAACSRGRLLDEGRALYNSMVRDYGINPTVQHYTCMVDLLGHCGQLD---EAYDLIRHMSVKPDSGVWGALLNSCKIHG 1293 N LF++ + K ++F WN +I A +G A+L + M L P + P +KACS+L I G+ H+ G++ D+FV +ALI MY+ CG + DAR VF+ I +R+ V W SM+ Y NG+ +++SL +++ + +A LV+VIS+ + + IH F K GF V L+D YAK G V VA +F+++ ++ VS+N+I++ YA G++ EA ++F ++ K + IT VL A S L G+ +++ ++R G+ V T ++D+ CG+++ +A+D +++ +V+ W A++ +HG Sbjct: 27 NLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIR-MGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRS----WTAMIAGYGMHG 367 The following BLAST results are available for this feature:
BLAST of Psat4g007880.1 vs. DB:Swiss
Analysis Date: 2019-09-12 (BLAST: P. sativum Cameor genome v1a vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: P. sativum Cameor genome v1a
Date Performed: 2019-09-12
Sequences
The
following sequences are available for this feature:
mRNA sequence >Psat4g007880.1_Ps_Cameor_v1a ID=Psat4g007880.1_Ps_Cameor_v1a; Name=Psat4g007880.1; organism=Pisum sativum; type=mRNA; length=2500bpback to top protein sequence of Psat4g007880.1_Ps_Cameor_v1a >Psat4g007880.1_Ps_Cameor_v1a ID=Psat4g007880.1_Ps_Cameor_v1a; Name=Psat4g007880.1_Ps_Cameor_v1a; organism=Pisum sativum; type=polypeptide; length=621bpback to top mRNA from alignment at chr4LG4:9752923..9755422+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Psat4g007880.1_Ps_Cameor_v1a ID=Psat4g007880.1_Ps_Cameor_v1a; Name=Psat4g007880.1; organism=Pisum sativum; type=mRNA; length=2500bp; location=Sequence derived from: chr4LG4:9752923..9755422+ (Pisum sativumback to top Coding sequence (CDS) from alignment at chr4LG4:9752923..9755422+ >Psat4g007880.1_Ps_Cameor_v1a ID=Psat4g007880.1_Ps_Cameor_v1a; Name=Psat4g007880.1; organism=Pisum sativum; type=CDS; length=3726bp; location=Sequence derived from: chr4LG4:9752923..9755422+ (Pisum sativumback to top |