Psat4g008240.1

Transcript Overview
NamePsat4g008240.1
Unique NamePsat4g008240.1_Ps_Cameor_v1a
TypemRNA
OrganismPisum sativum (pea)
Sequence length2161
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr4LG4supercontigchr4LG4:9986449..9988609 -Pisum sativum Cameor genome v1an/a
chr4LG4supercontigchr4LG4:9986449..9988609 -Pisum sativum Cameor genome v1an/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan: P. sativum Cameor genome v1a2019-09-12
BLAST: P. sativum Cameor genome v1a vs. Swissprot2019-09-12
Pisum sativum Cameor genome v1a2019-09-06
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
caipsL061Cicer arietinum ICC 4958 genome v2Cicer arietinum
crpsL725Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
caipsL746Cicer arietinum ICC 4958 genome v2Cicer arietinum
capsL617Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
capsL630Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
psvuR304Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
psvuR359Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pspvR375Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccpsL347Cajanus cajan Asha genome v1.0Cajanus cajan
anpsL0016Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpsL0017Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpsL0024Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpsL0204Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpsL0691Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
aspsL199Vigna angularis Jingnong 6 genome v1.1Vigna angularis
pszwsR282Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pszwsR306Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pszwsR377Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pstifR273Vicia faba cv. Tiffany genome v1.0Vicia faba
pstifR369Vicia faba cv. Tiffany genome v1.0Vicia faba
psvfhR268Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
psvfhR359Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
psvrvR259Vigna radiata cv. VC1973A genome v6.0Vigna radiata
psvrvR316Vigna radiata cv. VC1973A genome v6.0Vigna radiata
psvssR344Vicia sativa cv. Studenica genome v1.0Vicia sativa
psvuaR291Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
psvssR430Vicia sativa cv. Studenica genome v1.0Vicia sativa
canpsL617Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canpsL629Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjpsL137Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carpsL619Cicer arietinum
ccapsL155Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapsL193Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapsL713Cajanus cajan cv. Asha genome v2.0Cajanus cajan
psvumR398Vigna umbellata FF25 genome v1.0Vigna umbellata
psvvaR323Vicia villosa cv. AU Merit genome v1.0Vicia villosa
psvvaR338Vicia villosa cv. AU Merit genome v1.0Vicia villosa
psvvaR389Vicia villosa cv. AU Merit genome v1.0Vicia villosa
psvstR286Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
psvasR360Vigna angularis cv. Shumari genome v1.a1Vigna angularis
psvstR377Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
psvunR283Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
psvunR340Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
pspvfR389Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Psat04G0021800-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Psat4g008240Psat4g008240_Ps_Cameor_v1aPisum sativumgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Psat4g008240.1Psat4g008240.1_Ps_Cameor_v1a-proteinPisum sativumpolypeptide
Psat4g008240.1_Ps_Cameor_v1aPsat4g008240.1_Ps_Cameor_v1aPisum sativumpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Psat4g008240.1.exon1Psat4g008240.1.exon1_Ps_Cameor_v1aPisum sativumexon
Psat4g008240.1.exon2Psat4g008240.1.exon2_Ps_Cameor_v1aPisum sativumexon
Psat4g008240.1.exon3Psat4g008240.1.exon3_Ps_Cameor_v1aPisum sativumexon
Psat4g008240.1.exon4Psat4g008240.1.exon4_Ps_Cameor_v1aPisum sativumexon
Psat4g008240.1.exon5Psat4g008240.1.exon5_Ps_Cameor_v1aPisum sativumexon
Psat4g008240.1.exon6Psat4g008240.1.exon6_Ps_Cameor_v1aPisum sativumexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Psat4g008240.1.cds1Psat4g008240.1.cds1_Ps_Cameor_v1aPisum sativumCDS
Psat4g008240.1.cds2Psat4g008240.1.cds2_Ps_Cameor_v1aPisum sativumCDS
Psat4g008240.1.cds3Psat4g008240.1.cds3_Ps_Cameor_v1aPisum sativumCDS
Psat4g008240.1.cds4Psat4g008240.1.cds4_Ps_Cameor_v1aPisum sativumCDS
Psat4g008240.1.cds5Psat4g008240.1.cds5_Ps_Cameor_v1aPisum sativumCDS
Psat4g008240.1.cds6Psat4g008240.1.cds6_Ps_Cameor_v1aPisum sativumCDS


Homology
[Close]
BLAST of Psat4g008240.1 vs. DB:Swiss
Match: PPR62_ARATH (Pentatricopeptide repeat-containing protein At1g28690, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E34 PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 1.372e-17
Identity = 48/105 (45.71%), Postives = 64/105 (60.95%), Query Frame = 3 
Query:  534 NGLPDKALDLFSKMQIEYCIAPNFVTFLSALSARAPAGLMNKG----------------------------RAGRLNQAWEFVTRMPERPNSDVWAALLSSCRLQ 764
            NG P++AL+LF++M+ E+ I PN+VTFL ALSA + +GL++KG                            RAG LN+A+EF   MPERP+SD+WAALLSSC L 
Sbjct:  352 NGNPEEALELFTRMK-EFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLH 455
[Close]
BLAST of Psat4g008240.1 vs. DB:Swiss
Match: Y1439_ARATH (BTB/POZ domain-containing protein At1g04390 OS=Arabidopsis thaliana OX=3702 GN=At1g04390 PE=2 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 1.226e-10
Identity = 45/101 (44.55%), Postives = 62/101 (61.39%), Query Frame = 3 
Query:    3 NGDSVSVHGVILVVRCPSLLPSEVLYSGESSKEIKDHFIGETVREVRYSSHVDYEAXXXXXECLYWGHLHAAEEETVEKLKILPKRCNLQPLLQLLCRQSP 305
            +G+S SV+ VI+ VRCP LLP +      SS  I       TV+E+R S++VD  AL+ LLE  Y G++   E  T++KLK L K C  + LLQ+LCR+ P
Sbjct:  688 SGNSASVNKVIIAVRCPMLLPPK--EGAHSSSTISTEKSQRTVQEIRMSANVDILALVKLLEFAYSGYVEV-ESTTLKKLKPLAKHCKAKVLLQMLCRRRP 785
[Close]
BLAST of Psat4g008240.1 vs. DB:Swiss
Match: PPR32_ARATH (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 6.862e-10
Identity = 36/105 (34.29%), Postives = 55/105 (52.38%), Query Frame = 3 
Query:  534 NGLPDKALDLFSKMQIEYCIAPNFVTFLSALSARAPAGLMNKG----------------------------RAGRLNQAWEFVTRMPERPNSDVWAALLSSCRLQ 764
            +G    AL+LF +MQ +  I PN VTFLS +SA + +GL+  G                            RAGRLN+AW+F+ +MP +P  +V+ A+L +C++ 
Sbjct:  517 HGFGKAALELFEEMQ-KGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIH 620
[Close]
BLAST of Psat4g008240.1 vs. DB:Swiss
Match: PP140_ARATH (Pentatricopeptide repeat-containing protein At2g01510, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H37 PE=3 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 8.059e-10
Identity = 41/125 (32.80%), Postives = 61/125 (48.80%), Query Frame = 3 
Query:  534 NGLPDKALDLFSKMQIEYCIAPNFVTFLSALSARAPAGLMNKG------------------------------RAGRLNQAWEFVTRMPERPNSDVWAALLSSCRLQ--TILQQLNCGAIMRLSP 812
            NG   +AL LF+ MQ E  + PN+VTFL  LSA + AGL+N+G                              R+G L +A+EF+ +MP  P++ +W ALL +C +    IL Q     ++  +P
Sbjct:  289 NGDSREALTLFTTMQNE-GLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAP 412
[Close]
BLAST of Psat4g008240.1 vs. DB:Swiss
Match: PP429_ARATH (Putative pentatricopeptide repeat-containing protein At5g52630 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H52 PE=3 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 5.358e-9
Identity = 39/119 (32.77%), Postives = 57/119 (47.90%), Query Frame = 3 
Query:  549 KALDLFSKMQIEYCIAPNFVTFLSALSARAPAGLMNKGR---------------------------AGRLNQAWEFVTRMPERPNSDVWAALLSSCRLQ--TILQQLNCGAIMRLSPKS 818
            K ++LF +M++   + PNF+TFL+ L+A + AGL+++GR                           AGRL +A E +T MP  P   VW ALL+SC +   T L       +  L P S
Sbjct:  301 KVIELFKRMKLS-GMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVS 418
[Close]
BLAST of Psat4g008240.1 vs. DB:Swiss
Match: PPR83_ARATH (Putative pentatricopeptide repeat-containing protein At1g56570 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E64 PE=3 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 5.547e-8
Identity = 36/125 (28.80%), Postives = 59/125 (47.20%), Query Frame = 3 
Query:  534 NGLPDKALDLFSKMQIEYCIAPNFVTFLSALSARAPAGLMNKG----------------------------RAGRLNQAWEFVTRMPERPNSDVWAALLSSCRLQT---ILQQLNCGAIMRLSPK 815
            +G   +A++LF KM +   I P+ + F++ LSA   AGL+ KG                            RAG++ +A+E V RMP +P+   W A+L +C+      ++ +L    +M L PK
Sbjct:  393 HGYGAEAVELFDKM-VSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPK 516
[Close]
BLAST of Psat4g008240.1 vs. DB:Swiss
Match: PP223_ARATH (Putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H52 PE=1 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 7.166e-8
Identity = 30/80 (37.50%), Postives = 44/80 (55.00%), Query Frame = 3 
Query:  534 NGLPDKALDLFSKMQIEYCIAP---NFVTFLSALSARAPAGLMNKGRAGRLNQAWEFVTRMPERPNSDVWAALLSSCRLQ 764
            +GL DK L+LF  M+ EY + P   ++   +  L           GRAGRL++A EF+  MP  P+  VW ALL +C++ 
Sbjct:  371 SGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLL-----------GRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIH 439
[Close]
BLAST of Psat4g008240.1 vs. DB:Swiss
Match: PP336_ARATH (Pentatricopeptide repeat-containing protein At4g22760 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E6 PE=2 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 1.059e-7
Identity = 37/104 (35.58%), Postives = 50/104 (48.08%), Query Frame = 3 
Query:  534 NGLPDKALDLFSKMQIEYCIAPNFVTFLSALSARAPAGLMNKG---------------------------RAGRLNQAWEFVTRMPERPNSDVWAALLSSCRLQ 764
            NG+  +A  LF+ M IE  I PN VTF   LSA + +GL+ +G                           RAGRL +A+E +  MP +PN+ VW ALL +  L 
Sbjct:  410 NGMATEANSLFTAM-IEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLH 512
[Close]
BLAST of Psat4g008240.1 vs. DB:Swiss
Match: PP357_ARATH (Pentatricopeptide repeat-containing protein At4g39530 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E52 PE=3 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 1.307e-7
Identity = 36/101 (35.64%), Postives = 49/101 (48.51%), Query Frame = 3 
Query:  534 NGLPDKALDLFSKMQIEYCIAPNFVTFLSALSARAPAGLMNK---------------------------GRAGRLNQAWEFVTRMPERPNSDVWAALLSSC 755
            +G   KAL +  KM  E  I PN++TF+  LSA + AGL+                             GRAGRLN+A E + +MP +P + VW +LLS C
Sbjct:  634 HGEGKKALQMLEKMMSE-GIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGC 733
[Close]
BLAST of Psat4g008240.1 vs. DB:Swiss
Match: PP159_ARATH (Pentatricopeptide repeat-containing protein At2g17210 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E77 PE=3 SV=2)

HSP 1 Score: 57.3806 bits (137), Expect = 1.556e-7
Identity = 37/104 (35.58%), Postives = 50/104 (48.08%), Query Frame = 3 
Query:  534 NGLPDKALDLFSKMQIEYCIAPNFVTFLSALSARAPAGLMNKG---------------------------RAGRLNQAWEFVTRMPE--RPNSDVWAALLSSCR 758
            NGLPDKAL LF +M+ +    PN VT+L+ALSA    GL+ KG                           RAG ++ A E +  +PE  +  +  W A+LS CR
Sbjct:  527 NGLPDKALALFDEMK-QKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCR 629
The following BLAST results are available for this feature:
BLAST of Psat4g008240.1 vs. DB:Swiss
Analysis Date: 2019-09-12 (BLAST: P. sativum Cameor genome v1a vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
PPR62_ARATH1.372e-1745.71Pentatricopeptide repeat-containing protein At1g28... [more]
Y1439_ARATH1.226e-1044.55BTB/POZ domain-containing protein At1g04390 OS=Ara... [more]
PPR32_ARATH6.862e-1034.29Pentatricopeptide repeat-containing protein At1g11... [more]
PP140_ARATH8.059e-1032.80Pentatricopeptide repeat-containing protein At2g01... [more]
PP429_ARATH5.358e-932.77Putative pentatricopeptide repeat-containing prote... [more]
PPR83_ARATH5.547e-828.80Putative pentatricopeptide repeat-containing prote... [more]
PP223_ARATH7.166e-837.50Putative pentatricopeptide repeat-containing prote... [more]
PP336_ARATH1.059e-735.58Pentatricopeptide repeat-containing protein At4g22... [more]
PP357_ARATH1.307e-735.64Pentatricopeptide repeat-containing protein At4g39... [more]
PP159_ARATH1.556e-735.58Pentatricopeptide repeat-containing protein At2g17... [more]
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InterPro
Analysis Name: InterProScan: P. sativum Cameor genome v1a
Date Performed: 2019-09-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 88..302
e-value: 4.0E-11
score: 44.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 347..385
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 347..377

Sequences
The following sequences are available for this feature:

mRNA sequence

>Psat4g008240.1_Ps_Cameor_v1a ID=Psat4g008240.1_Ps_Cameor_v1a; Name=Psat4g008240.1; organism=Pisum sativum; type=mRNA; length=2161bp
TAAATGGGGACTCTGTGAGTGTTCATGGTGTTATTCTTGTTGTTCGATGT
CCATCACTTCTACCTTCTGAAGTGTTATATAGTGGTGAGAGTTCTAAAGA
AATAAAAGATCATTTTATTGGAGAGACAGTGAGAGAAGTTCGTTATTCTT
CTCATGTTGATTATGAAGCATTGTTATTATTGTTGGAATGTTTGTATTGG
GGACACTTGCATGCAGCAGAAGAAGAAACTGTAGAGAAGCTCAAAATTCT
TCCTAAGCGTTGCAATCTACAACCTCTCTTGCAACTGCTTTGTAGACAAT
CTCCAAATTTGGCTGTGACTATTTACAGGGTTTGTTCAGATCAGGAATGC
AAGAGAGTCATTCACAAGTCATAAAGCAATGTGTGGAACTTTGTTTTGTT
GGCTTGGCAATTACGGGATTCTGGTGAACTTGACGAATTTGATGAGGCGC
TAGTTCACTTCATTTATTCTGTTTCTATTGAACTTAACCATGGGGGTGAA
AAACGCTTTAGGTGATGTGTACCCTTCAAGATGATTCACAGTATTTAGAA
AAAAAACAACAACATGTCTGGTGGAACGCATAATAGTTTGAGAAAAGCAC
TTGGAGCTCTTAAGGATACCACAACGGTTTCATTGGCTAAAGTCAACAGT
GGTTACATAGAATGGGTAAATGAATTGGTTGGATTTCACAAATATGATTA
TGGTTTTCAAATTACATCAAGATCATCATAAAGATCATCATTTATAGAAA
TCATCATATTCATCCTCGTCGTGAAGCTGTTCAATGGATGCTTAGAGTCA
GTGCTCATTATGATTTCCCACCTCTCGCTGCAGCCACTGCCGAGGAGTTC
AATCCATGCGGAAATACGTCGTATAACGTTCTCCTGTACACAAAAAAAAA
GGTGGTTTATCTCAAGTCAGAAAAGTAACACAAGACACAAGTCATAAAAA
GAAGTTCAAAGAGAAAAGGATTCATACAGCAAATTCGCATGTGAAACTCG
CACCAAGACTAACTTGGTTATGGTTTTTGGAGAGATCACAACCAAGGCTA
ATGTTGATTCATGAGAAGAATGTTTCTTCATGGAAATCTATGATTGATAG
ATATGGGAAGAACGGGTTACCTGATAAAGCGCTTGATCTGTTTAGTAAGA
TGCAGATAGAATATTGCATTGCACCCAATTTTGTCACGTTCCTCAGTGCT
CTTTCAGCTCGTGCACCTGCCGGACTTATGAATAAGGGTGGGAGATTTTT
TTTCAGAGTATGGAGAATGAATATAAACTGAAGCCAGGGATGGAGCATTA
AGCTTACATGTTTGATCTGTTAGGGCGAGCAGGGAGGCTGAATCAGGCTT
GGGAGTTTGTCACGAGGATGCCTGAGAGACCCAATTCAGACGTGTGGGCT
GCTTTACTTAGTTCGTGCAGACTCCAAACCATTCTGCAGCAGCTCAACTG
CGGTGCGATAATGCGATGTTGGTCTTAACTTGAAACCGAACCGGCCACCG
AAGATGAACCTGTTTGCAAACTGCACAAAGACATAATGCATACCGAAATC
AATTTACACTTGACAACATAATACAAAACCAAATAACATTACAATAGCTT
GACCAACTAATTAACCTTCACATGTATAGCTTAGCAGTAAGTCCCAAATC
AAAGAAGGGACCACCTGTATTTTCACTACAGATGCAAGAAAACAGTGACA
AAAACCTCACCGGCCATTGCAGCGCCAGACCGGGCAGCAAAACCATCATG
GTAGCAGTACAATCTCAGTCAAGTTGAAATGCTTAAATTAGTGATTTGTA
CTTATGTACGGGAAAGTCAATGGATACAAGTAATGGAAAATAGTCGCGCT
TTGGAAGCATCAAACAGCCGGATGGTTTCAATGTAAGCAACTCAGAAGCA
TCCGTTAAGAGAGAGATCAGTGCGGCATGTGGTGATGAATCTCTTGTTTT
GAATAAGTCAACAGATAGATTTACTGAGTCATCCTCCAAGGATAATTTCG
GGAACCAATCTGAACATAGGGTAACGAAGGCCAATTTAAACAGACCATTA
ACTGATGAGAAAAGCAACTCATTGCACAAGAAGGAAAACATACCGGTTCT
AGCCAAGTGGAGTATGCTTGGAAATGCCAGTCCCTCTTCCTGCAACAAGT
CAGCTTCCTGA
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protein sequence of Psat4g008240.1_Ps_Cameor_v1a

>Psat4g008240.1_Ps_Cameor_v1a ID=Psat4g008240.1_Ps_Cameor_v1a; Name=Psat4g008240.1_Ps_Cameor_v1a; organism=Pisum sativum; type=polypeptide; length=412bp
NGDSVSVHGVILVVRCPSLLPSEVLYSGESSKEIKDHFIGETVREVRYSS
HVDYEALLLLLECLYWGHLHAAEEETVEKLKILPKRCNLQPLLQLLCRQS
PNLAVTIYRIIIKIIIYRNHHIHPRREAVQWMLRVSAHYDFPPLAAATAE
EFNPCGNTSYNVLLYTKKKVVYLKYGKNGLPDKALDLFSKMQIEYCIAPN
FVTFLSALSARAPAGLMNKGRAGRLNQAWEFVTRMPERPNSDVWAALLSS
CRLQTILQQLNCGAIMRLSPKSKKGPPVFSLQMQENSDKNLTGHCSARPG
SKTIMVAVQSHIKQPDGFNVSNSEASVKREISAACGDESLVLNKSTDRFT
ESSSKDNFGNQSEHRVTKANLNRPLTDEKSNSLHKKENIPVLAKWSMLGN
ASPSSCNKSAS*
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mRNA from alignment at chr4LG4:9986449..9988609-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Psat4g008240.1_Ps_Cameor_v1a ID=Psat4g008240.1_Ps_Cameor_v1a; Name=Psat4g008240.1; organism=Pisum sativum; type=mRNA; length=2161bp; location=Sequence derived from: chr4LG4:9986449..9988609- (Pisum sativum
TAAATGGGGACTCTGTGAGTGTTCATGGTGTTATTCTTGTTGTTCGATGT
CCATCACTTCTACCTTCTGAAGTGTTATATAGTGGTGAGAGTTCTAAAGA
AATAAAAGATCATTTTATTGGAGAGACAGTGAGAGAAGTTCGTTATTCTT
CTCATGTTGATTATGAAGCATTGTTATTATTGTTGGAATGTTTGTATTGG
GGACACTTGCATGCAGCAGAAGAAGAAACTGTAGAGAAGCTCAAAATTCT
TCCTAAGCGTTGCAATCTACAACCTCTCTTGCAACTGCTTTGTAGACAAT
CTCCAAATTTGGCTGTGACTATTTACAGGGTTTGTTCAGATCAGGAATGC
AAGAGAGTCATTCACAAGTCATAAAGCAATGTGTGGAACTTTGTTTTGTT
GGCTTGGCAATTACGGGATTCTGGTGAACTTGACGAATTTGATGAGGCGC
TAGTTCACTTCATTTATTCTGTTTCTATTGAACTTAACCATGGGGGTGAA
AAACGCTTTAGGTGATGTGTACCCTTCAAGATGATTCACAGTATTTAGAA
AAAAAACAACAACATGTCTGGTGGAACGCATAATAGTTTGAGAAAAGCAC
TTGGAGCTCTTAAGGATACCACAACGGTTTCATTGGCTAAAGTCAACAGT
GGTTACATAGAATGGGTAAATGAATTGGTTGGATTTCACAAATATGATTA
TGGTTTTCAAATTACATCAAGATCATCATAAAGATCATCATTTATAGAAA
TCATCATATTCATCCTCGTCGTGAAGCTGTTCAATGGATGCTTAGAGTCA
GTGCTCATTATGATTTCCCACCTCTCGCTGCAGCCACTGCCGAGGAGTTC
AATCCATGCGGAAATACGTCGTATAACGTTCTCCTGTACACAAAAAAAAA
GGTGGTTTATCTCAAGTCAGAAAAGTAACACAAGACACAAGTCATAAAAA
GAAGTTCAAAGAGAAAAGGATTCATACAGCAAATTCGCATGTGAAACTCG
CACCAAGACTAACTTGGTTATGGTTTTTGGAGAGATCACAACCAAGGCTA
ATGTTGATTCATGAGAAGAATGTTTCTTCATGGAAATCTATGATTGATAG
ATATGGGAAGAACGGGTTACCTGATAAAGCGCTTGATCTGTTTAGTAAGA
TGCAGATAGAATATTGCATTGCACCCAATTTTGTCACGTTCCTCAGTGCT
CTTTCAGCTCGTGCACCTGCCGGACTTATGAATAAGGGTGGGAGATTTTT
TTTCAGAGTATGGAGAATGAATATAAACTGAAGCCAGGGATGGAGCATTA
AGCTTACATGTTTGATCTGTTAGGGCGAGCAGGGAGGCTGAATCAGGCTT
GGGAGTTTGTCACGAGGATGCCTGAGAGACCCAATTCAGACGTGTGGGCT
GCTTTACTTAGTTCGTGCAGACTCCAAACCATTCTGCAGCAGCTCAACTG
CGGTGCGATAATGCGATGTTGGTCTTAACTTGAAACCGAACCGGCCACCG
AAGATGAACCTGTTTGCAAACTGCACAAAGACATAATGCATACCGAAATC
AATTTACACTTGACAACATAATACAAAACCAAATAACATTACAATAGCTT
GACCAACTAATTAACCTTCACATGTATAGCTTAGCAGTAAGTCCCAAATC
AAAGAAGGGACCACCTGTATTTTCACTACAGATGCAAGAAAACAGTGACA
AAAACCTCACCGGCCATTGCAGCGCCAGACCGGGCAGCAAAACCATCATG
GTAGCAGTACAATCTCAGTCAAGTTGAAATGCTTAAATTAGTGATTTGTA
CTTATGTACGGGAAAGTCAATGGATACAAGTAATGGAAAATAGTCGCGCT
TTGGAAGCATCAAACAGCCGGATGGTTTCAATGTAAGCAACTCAGAAGCA
TCCGTTAAGAGAGAGATCAGTGCGGCATGTGGTGATGAATCTCTTGTTTT
GAATAAGTCAACAGATAGATTTACTGAGTCATCCTCCAAGGATAATTTCG
GGAACCAATCTGAACATAGGGTAACGAAGGCCAATTTAAACAGACCATTA
ACTGATGAGAAAAGCAACTCATTGCACAAGAAGGAAAACATACCGGTTCT
AGCCAAGTGGAGTATGCTTGGAAATGCCAGTCCCTCTTCCTGCAACAAGT
CAGCTTCCTGA
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Coding sequence (CDS) from alignment at chr4LG4:9986449..9988609-

>Psat4g008240.1_Ps_Cameor_v1a ID=Psat4g008240.1_Ps_Cameor_v1a; Name=Psat4g008240.1; organism=Pisum sativum; type=CDS; length=2476bp; location=Sequence derived from: chr4LG4:9986449..9988609- (Pisum sativum
TAAATGGGGACTCTGTGAGTGTTCATGGTGTTATTCTTGTTGTTCGATGT
CCATCACTTCTACCTTCTGAAGTGTTATATAGTGGTGAGAGTTCTAAAGA
AATAAAAGATCATTTTATTGGAGAGACAGTGAGAGAAGTTCGTTATTCTT
CTCATGTTGATTATGAAGCATTGTTATTATTGTTGGAATGTTTGTATTGG
GGACACTTGCATGCAGCAGAAGAAGAAACTGTAGAGAAGCTCAAAATTCT
TCCTAAGCGTTGCAATCTACAACCTCTCTTGCAACTGCTTTGTAGACAAT
CTCCAAATTTGGCTGTGACTATTTACAGGTAAATGGGGACTCTGTGAGTG
TTCATGGTGTTATTCTTGTTGTTCGATGTCCATCACTTCTACCTTCTGAA
GTGTTATATAGTGGTGAGAGTTCTAAAGAAATAAAAGATCATTTTATTGG
AGAGACAGTGAGAGAAGTTCGTTATTCTTCTCATGTTGATTATGAAGCAT
TGTTATTATTGTTGGAATGTTTGTATTGGGGACACTTGCATGCAGCAGAA
GAAGAAACTGTAGAGAAGCTCAAAATTCTTCCTAAGCGTTGCAATCTACA
ACCTCTCTTGCAACTGCTTTGTAGACAATCTCCAAATTTGGCTGTGACTA
TTTACAGGATCATCATAAAGATCATCATTTATAGAAATCATCATATTCAT
CCTCGTCGTGAAGCTGTTCAATGGATGCTTAGAGTCAGTGCTCATTATGA
TTTCCCACCTCTCGCTGCAGCCACTGCCGAGGAGTTCAATCCATGCGGAA
ATACGTCGTATAACGTTCTCCTGTACACAAAAAAAAAGGTGGTTTATCTC
AAATCATCATAAAGATCATCATTTATAGAAATCATCATATTCATCCTCGT
CGTGAAGCTGTTCAATGGATGCTTAGAGTCAGTGCTCATTATGATTTCCC
ACCTCTCGCTGCAGCCACTGCCGAGGAGTTCAATCCATGCGGAAATACGT
CGTATAACGTTCTCCTGTACACAAAAAAAAAGGTGGTTTATCTCAAATAT
GGGAAGAACGGGTTACCTGATAAAGCGCTTGATCTGTTTAGTAAGATGCA
GATAGAATATTGCATTGCACCCAATTTTGTCACGTTCCTCAGTGCTCTTT
CAGCTCGTGCACCTGCCGGACTTATGAATAAGGATATGGGAAGAACGGGT
TACCTGATAAAGCGCTTGATCTGTTTAGTAAGATGCAGATAGAATATTGC
ATTGCACCCAATTTTGTCACGTTCCTCAGTGCTCTTTCAGCTCGTGCACC
TGCCGGACTTATGAATAAGGGGCGAGCAGGGAGGCTGAATCAGGCTTGGG
AGTTTGTCACGAGGATGCCTGAGAGACCCAATTCAGACGTGTGGGCTGCT
TTACTTAGTTCGTGCAGACTCCAAACCATTCTGCAGCAGCTCAACTGCGG
TGCGATAATGCGATGGCGAGCAGGGAGGCTGAATCAGGCTTGGGAGTTTG
TCACGAGGATGCCTGAGAGACCCAATTCAGACGTGTGGGCTGCTTTACTT
AGTTCGTGCAGACTCCAAACCATTCTGCAGCAGCTCAACTGCGGTGCGAT
AATGCGATTAAGTCCCAAATCAAAGAAGGGACCACCTGTATTTTCACTAC
AGATGCAAGAAAACAGTGACAAAAACCTCACCGGCCATTGCAGCGCCAGA
CCGGGCAGCAAAACCATCATGGTAGCAGTACAATCTCATAAGTCCCAAAT
CAAAGAAGGGACCACCTGTATTTTCACTACAGATGCAAGAAAACAGTGAC
AAAAACCTCACCGGCCATTGCAGCGCCAGACCGGGCAGCAAAACCATCAT
GGTAGCAGTACAATCTCACATCAAACAGCCGGATGGTTTCAATGTAAGCA
ACTCAGAAGCATCCGTTAAGAGAGAGATCAGTGCGGCATGTGGTGATGAA
TCTCTTGTTTTGAATAAGTCAACAGATAGATTTACTGAGTCATCCTCCAA
GGATAATTTCGGGAACCAATCTGAACATAGGGTAACGAAGGCCAATTTAA
ACAGACCATTAACTGATGAGAAAAGCAACTCATTGCACAAGAAGGAAAAC
ATACCGGTTCTAGCCAAGTGGAGTATGCTTGGAAATGCCAGTCCCTCTTC
CTGCAACAAGTCAGCTTCCTGACATCAAACAGCCGGATGGTTTCAATGTA
AGCAACTCAGAAGCATCCGTTAAGAGAGAGATCAGTGCGGCATGTGGTGA
TGAATCTCTTGTTTTGAATAAGTCAACAGATAGATTTACTGAGTCATCCT
CCAAGGATAATTTCGGGAACCAATCTGAACATAGGGTAACGAAGGCCAAT
TTAAACAGACCATTAACTGATGAGAAAAGCAACTCATTGCACAAGAAGGA
AAACATACCGGTTCTAGCCAAGTGGAGTATGCTTGGAAATGCCAGTCCCT
CTTCCTGCAACAAGTCAGCTTCCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding