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Transcript Overview
Name | Psat4g009880.1 |
Unique Name | Psat4g009880.1_Ps_Cameor_v1a |
Type | mRNA |
Organism | Pisum sativum (pea) |
Sequence length | 2828 |
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks
Orthologs
Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Species | Type |
Psat4g009880.1 | Psat4g009880.1_Ps_Cameor_v1a-protein | Pisum sativum | polypeptide |
Psat4g009880.1_Ps_Cameor_v1a | Psat4g009880.1_Ps_Cameor_v1a | Pisum sativum | polypeptide |
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Psat4g009880.1.five_prime_utr1 | Psat4g009880.1.five_prime_utr1_Ps_Cameor_v1a | Pisum sativum | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Psat4g009880.1.exon1 | Psat4g009880.1.exon1_Ps_Cameor_v1a | Pisum sativum | exon |
Psat4g009880.1.exon2 | Psat4g009880.1.exon2_Ps_Cameor_v1a | Pisum sativum | exon |
Psat4g009880.1.exon3 | Psat4g009880.1.exon3_Ps_Cameor_v1a | Pisum sativum | exon |
Psat4g009880.1.exon4 | Psat4g009880.1.exon4_Ps_Cameor_v1a | Pisum sativum | exon |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Psat4g009880.1.cds1 | Psat4g009880.1.cds1_Ps_Cameor_v1a | Pisum sativum | CDS |
Psat4g009880.1.cds2 | Psat4g009880.1.cds2_Ps_Cameor_v1a | Pisum sativum | CDS |
Psat4g009880.1.cds3 | Psat4g009880.1.cds3_Ps_Cameor_v1a | Pisum sativum | CDS |
Psat4g009880.1.cds4 | Psat4g009880.1.cds4_Ps_Cameor_v1a | Pisum sativum | CDS |
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Psat4g009880.1.three_prime_utr1 | Psat4g009880.1.three_prime_utr1_Ps_Cameor_v1a | Pisum sativum | three_prime_UTR |
Homology
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan: P. sativum Cameor genome v1a
Date Performed: 2019-09-12
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | COILS | Coil | Coil | coord: 32..55 |
Sequences
The
following sequences are available for this feature:
mRNA sequence >Psat4g009880.1_Ps_Cameor_v1a ID=Psat4g009880.1_Ps_Cameor_v1a; Name=Psat4g009880.1; organism=Pisum sativum; type=mRNA; length=2828bp AAGAATCATCGCTATCACCCACAAAAATAATTGACCAAACCAAATGGGTG TTTTGGGTTTTTTCTTCTTTATTACTTTACCTCCTTTTGCTTCATCATGA AAAAAAGCCATATTGGTTTTCTCCACCCAGGCAGGACAAGTGAGTCACAA ACATCAGATGAAAAGGGCATAATAGTAAATGAGCACATTCACAAAACACA ACCAACCAACTCCAAAACAAACAAAGCTAAAAATAAGGTTTGTTGTAACA AACCACTGCTACAGAATAGCAGGGAGAGAAAAGAAAAGAAAACTAACATC ATCATCTCATTCATTATATCTTTTCTTTCCTTTTATTTATTTTTCTTTCT TTTTCCAGCCCCTAATCTAATCTATTTTCCATCTTATTTTTTTTTTCCAT CTCTGACCCATTCCATTATTTCTCTCTCTACACAAACAATCAAACAAGAA ACATGGAAACTCTAGTCCACAATGACCCTTTCTCTCTCATCAATGGCCCA GCTGGACCAAAAATTAAGTTTGAAGAAAGAAAAACAAAAAAAGAGAAAGA ATGGGAAACAAAAGATAGAGGTCTTGTTATGTTATAGATTAGATGTGTTC AATTGTCCTCCAACCAAACCCACCTTATTACTCTCTCTCTCTCATGAAAA CATGTTCCCGAAATTACCCTTCTGCAAGCCCCCAAAAAATCCCATCTTCA TCACTGGTTTTTCAAAACAAGAATATTTTTCACCGAGTTATGTGGGCTTT TTCGGTTTCTTTCTCTTGGTCAGAGTTTCACAGAAATACGAGAACCTTCT TAACCCTTTCCCCTTCTTTCTTCCTTTATTATTTCTACTATTATTTCGCC TCTTCTTTTTCTCTCTTCTCTATTCTCTCTCTCACTATATCTATATCTCT CTTCCTCTGTCACCTTTCTTATTTATTCTTTCTCTCTCTAGAGTTTTGTT TCTCTTTTCTTCTCTCATCTCCTCATGATGAAGAAGATGAAAGCTGTTGC CGTTTCCATCAATCCTTCGTCTGATGTGTTTATGGATCAGAGATCTATCA TGAGGCACCGGAGTCTCTTGCAGGACTATGAAGATTTGCATAAGGTAACC TTTTTGAAGAGATTGAGTTTTTATTTCATCGATTTCAACGGATCTAGATT TTTCTTTTGTGTTTTTGATTTACGATCGTTTTTTGTTCATTCTGTAATTT TAGGGTTTGTTGATGAAAACCTAAAAGGGATCTTATGTTTTTGTATTGTT TTTTGTTGAATTTAGGGTTTGTTGGAGAAATTAATAAGGGGATCTTGTGT TTTGATATTGTTGTTTTATGATTGTTTTGATTTAACCTCCGATCTTGATG AGATGATGTGTTTTGATCTTCATCTTTGTGGTATCGTTGTGGTTTTTCTG TATCTCTTAGGGTTTCCTTGTTTGTGTTCTATAGGAGTGTGATTTTGAAG CTTTTCTTGTTTACATGTTCATCAAGTTTTGGTCTTTAAGCTTGTTAGTT TTGAAGTTTTTGTTTCATATATATGTTTTCTTTTGAAGTTTTGAACTCAA AGTTCAGAATTTAACAATTAGTTGATGATTAACCTTTTTCTTTGGAGGGG TGATTTTGTTTAGGTTTGTTATGATAATTAGCATCTAATTTCACATGCTA TATTTTGTTTGAGATTGTTGTAGAGGACTTTTTTGCTAATCTGTTTATGA GATTATGGAAAAGCTCTTCTCATGATTTTGATGTTATGTTCTTCAGGAAA CAGAGGCCATGAGAATGAAATTGGAAGCTGTGAAGCAGAAAAAGTTGATT CTTTCAGCTGAAGTTAGGTAATGTCTCATGATGCTTAATTGTTTTTATGT TCTTCATTGTTTTAAGTTGATTACTCATATAGCTTATTTATCACTACAGA TTCTTAAGGCACCGTTACACATACTTGTTAAAACATCCTCTTCCTAAGGC ACAACCAAAGCAAGAAGTTATAAAGCCACAAAAGCTGAAAATCAAAGAGC CAAAGATCACAAAGGGAAGGAGCTACAATAGAAAGGAATCTACCCTGAGA CCTCACACCGGTTCAAAATCGAACTCAAAAGAAAGAGTTTTCAATGGATT TGTTGAAGACACAAGGCAGAAAACTAGCCATGTGTTTGATTTAAACCAGA ATGGTAGAAGCTTAAGTAAAAAAGATGGTTCTTTTCATAGCTCTTCTGCT CCTGTGCTTGACTTGAATCACAAAGAAAGGGTTCATAGTGGGAAAGAAGC CACAAAGAAAAGTGTAACACCATTTTTCGACTTGAACCAGATTTCGGTAA GCTAGTTGTTTTAATGATCTCTGTCAAACAGTTTTACGAGTGCATAAAAT CAAATTTGTCGATTTAAACTGGTTTCTTAACTGCTTTTCATCTATTTTGT TGCCATAATGCAGAGAGAAGAGGAGGAATTAGAGGGAAACAATCAGCCAA TGTGGATTGAAGAACAAAAGAAGAGTAGTACACAAAGAGGTGTGAATGAG GAACAGCACAATGATATCAAGCTTTCAGTTTGTAGAAACCTTGGAGAAGG ATCAAGTAGAGCAGGGAAAAGGAAGATCACATGGCAAGACCAAGTGGCAT TAAGGGTTTGATTGATCATAAGAGTAGTATAGTACAAATGGCTTAACTCC TGCCAAGTTGGAATGTGTATTCTACCAGTTGGCTTTACTTAAAAAAAAAA CCATTCTAGTTTATGTTTTCATCTTGTAAAGATAAAATATACTACCTTAT AGAATCATTAAGTCATTATATGTTCAATATATATAATACAGTATTTAGAT TGAATGGAGAATTTAACCCTTTGAAATC back to topprotein sequence of Psat4g009880.1_Ps_Cameor_v1a >Psat4g009880.1_Ps_Cameor_v1a ID=Psat4g009880.1_Ps_Cameor_v1a; Name=Psat4g009880.1_Ps_Cameor_v1a; organism=Pisum sativum; type=polypeptide; length=262bp MMKKMKAVAVSINPSSDVFMDQRSIMRHRSLLQDYEDLHKETEAMRMKLE AVKQKKLILSAEVRFLRHRYTYLLKHPLPKAQPKQEVIKPQKLKIKEPKI TKGRSYNRKESTLRPHTGSKSNSKERVFNGFVEDTRQKTSHVFDLNQNGR SLSKKDGSFHSSSAPVLDLNHKERVHSGKEATKKSVTPFFDLNQISREEE ELEGNNQPMWIEEQKKSSTQRGVNEEQHNDIKLSVCRNLGEGSSRAGKRK ITWQDQVALRV* back to topmRNA from alignment at chr4LG4:11268749..11271576+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >Psat4g009880.1_Ps_Cameor_v1a ID=Psat4g009880.1_Ps_Cameor_v1a; Name=Psat4g009880.1; organism=Pisum sativum; type=mRNA; length=2828bp; location=Sequence derived from: chr4LG4:11268749..11271576+ (Pisum sativum AAGAATCATCGCTATCACCCACAAAAATAATTGACCAAACCAAATGGGTG
TTTTGGGTTTTTTCTTCTTTATTACTTTACCTCCTTTTGCTTCATCATGA
AAAAAAGCCATATTGGTTTTCTCCACCCAGGCAGGACAAGTGAGTCACAA
ACATCAGATGAAAAGGGCATAATAGTAAATGAGCACATTCACAAAACACA
ACCAACCAACTCCAAAACAAACAAAGCTAAAAATAAGGTTTGTTGTAACA
AACCACTGCTACAGAATAGCAGGGAGAGAAAAGAAAAGAAAACTAACATC
ATCATCTCATTCATTATATCTTTTCTTTCCTTTTATTTATTTTTCTTTCT
TTTTCCAGCCCCTAATCTAATCTATTTTCCATCTTATTTTTTTTTTCCAT
CTCTGACCCATTCCATTATTTCTCTCTCTACACAAACAATCAAACAAGAA
ACATGGAAACTCTAGTCCACAATGACCCTTTCTCTCTCATCAATGGCCCA
GCTGGACCAAAAATTAAGTTTGAAGAAAGAAAAACAAAAAAAGAGAAAGA
ATGGGAAACAAAAGATAGAGGTCTTGTTATGTTATAGATTAGATGTGTTC
AATTGTCCTCCAACCAAACCCACCTTATTACTCTCTCTCTCTCATGAAAA
CATGTTCCCGAAATTACCCTTCTGCAAGCCCCCAAAAAATCCCATCTTCA
TCACTGGTTTTTCAAAACAAGAATATTTTTCACCGAGTTATGTGGGCTTT
TTCGGTTTCTTTCTCTTGGTCAGAGTTTCACAGAAATACGAGAACCTTCT
TAACCCTTTCCCCTTCTTTCTTCCTTTATTATTTCTACTATTATTTCGCC
TCTTCTTTTTCTCTCTTCTCTATTCTCTCTCTCACTATATCTATATCTCT
CTTCCTCTGTCACCTTTCTTATTTATTCTTTCTCTCTCTAGAGTTTTGTT
TCTCTTTTCTTCTCTCATCTCCTCATGATGAAGAAGATGAAAGCTGTTGC
CGTTTCCATCAATCCTTCGTCTGATGTGTTTATGGATCAGAGATCTATCA
TGAGGCACCGGAGTCTCTTGCAGGACTATGAAGATTTGCATAAGGTAACC
TTTTTGAAGAGATTGAGTTTTTATTTCATCGATTTCAACGGATCTAGATT
TTTCTTTTGTGTTTTTGATTTACGATCGTTTTTTGTTCATTCTGTAATTT
TAGGGTTTGTTGATGAAAACCTAAAAGGGATCTTATGTTTTTGTATTGTT
TTTTGTTGAATTTAGGGTTTGTTGGAGAAATTAATAAGGGGATCTTGTGT
TTTGATATTGTTGTTTTATGATTGTTTTGATTTAACCTCCGATCTTGATG
AGATGATGTGTTTTGATCTTCATCTTTGTGGTATCGTTGTGGTTTTTCTG
TATCTCTTAGGGTTTCCTTGTTTGTGTTCTATAGGAGTGTGATTTTGAAG
CTTTTCTTGTTTACATGTTCATCAAGTTTTGGTCTTTAAGCTTGTTAGTT
TTGAAGTTTTTGTTTCATATATATGTTTTCTTTTGAAGTTTTGAACTCAA
AGTTCAGAATTTAACAATTAGTTGATGATTAACCTTTTTCTTTGGAGGGG
TGATTTTGTTTAGGTTTGTTATGATAATTAGCATCTAATTTCACATGCTA
TATTTTGTTTGAGATTGTTGTAGAGGACTTTTTTGCTAATCTGTTTATGA
GATTATGGAAAAGCTCTTCTCATGATTTTGATGTTATGTTCTTCAGGAAA
CAGAGGCCATGAGAATGAAATTGGAAGCTGTGAAGCAGAAAAAGTTGATT
CTTTCAGCTGAAGTTAGGTAATGTCTCATGATGCTTAATTGTTTTTATGT
TCTTCATTGTTTTAAGTTGATTACTCATATAGCTTATTTATCACTACAGA
TTCTTAAGGCACCGTTACACATACTTGTTAAAACATCCTCTTCCTAAGGC
ACAACCAAAGCAAGAAGTTATAAAGCCACAAAAGCTGAAAATCAAAGAGC
CAAAGATCACAAAGGGAAGGAGCTACAATAGAAAGGAATCTACCCTGAGA
CCTCACACCGGTTCAAAATCGAACTCAAAAGAAAGAGTTTTCAATGGATT
TGTTGAAGACACAAGGCAGAAAACTAGCCATGTGTTTGATTTAAACCAGA
ATGGTAGAAGCTTAAGTAAAAAAGATGGTTCTTTTCATAGCTCTTCTGCT
CCTGTGCTTGACTTGAATCACAAAGAAAGGGTTCATAGTGGGAAAGAAGC
CACAAAGAAAAGTGTAACACCATTTTTCGACTTGAACCAGATTTCGGTAA
GCTAGTTGTTTTAATGATCTCTGTCAAACAGTTTTACGAGTGCATAAAAT
CAAATTTGTCGATTTAAACTGGTTTCTTAACTGCTTTTCATCTATTTTGT
TGCCATAATGCAGAGAGAAGAGGAGGAATTAGAGGGAAACAATCAGCCAA
TGTGGATTGAAGAACAAAAGAAGAGTAGTACACAAAGAGGTGTGAATGAG
GAACAGCACAATGATATCAAGCTTTCAGTTTGTAGAAACCTTGGAGAAGG
ATCAAGTAGAGCAGGGAAAAGGAAGATCACATGGCAAGACCAAGTGGCAT
TAAGGGTTTGATTGATCATAAGAGTAGTATAGTACAAATGGCTTAACTCC
TGCCAAGTTGGAATGTGTATTCTACCAGTTGGCTTTACTTAAAAAAAAAA
CCATTCTAGTTTATGTTTTCATCTTGTAAAGATAAAATATACTACCTTAT
AGAATCATTAAGTCATTATATGTTCAATATATATAATACAGTATTTAGAT
TGAATGGAGAATTTAACCCTTTGAAATC back to topCoding sequence (CDS) from alignment at chr4LG4:11268749..11271576+ >Psat4g009880.1_Ps_Cameor_v1a ID=Psat4g009880.1_Ps_Cameor_v1a; Name=Psat4g009880.1; organism=Pisum sativum; type=CDS; length=1572bp; location=Sequence derived from: chr4LG4:11268749..11271576+ (Pisum sativum ATGATGAAGAAGATGAAAGCTGTTGCCGTTTCCATCAATCCTTCGTCTGA TGTGTTTATGGATCAGAGATCTATCATGAGGCACCGGAGTCTCTTGCAGG ACTATGAAGATTTGCATAAGATGATGAAGAAGATGAAAGCTGTTGCCGTT TCCATCAATCCTTCGTCTGATGTGTTTATGGATCAGAGATCTATCATGAG GCACCGGAGTCTCTTGCAGGACTATGAAGATTTGCATAAGGAAACAGAGG CCATGAGAATGAAATTGGAAGCTGTGAAGCAGAAAAAGTTGATTCTTTCA GCTGAAGTTAGGAAACAGAGGCCATGAGAATGAAATTGGAAGCTGTGAAG CAGAAAAAGTTGATTCTTTCAGCTGAAGTTAGATTCTTAAGGCACCGTTA CACATACTTGTTAAAACATCCTCTTCCTAAGGCACAACCAAAGCAAGAAG TTATAAAGCCACAAAAGCTGAAAATCAAAGAGCCAAAGATCACAAAGGGA AGGAGCTACAATAGAAAGGAATCTACCCTGAGACCTCACACCGGTTCAAA ATCGAACTCAAAAGAAAGAGTTTTCAATGGATTTGTTGAAGACACAAGGC AGAAAACTAGCCATGTGTTTGATTTAAACCAGAATGGTAGAAGCTTAAGT AAAAAAGATGGTTCTTTTCATAGCTCTTCTGCTCCTGTGCTTGACTTGAA TCACAAAGAAAGGGTTCATAGTGGGAAAGAAGCCACAAAGAAAAGTGTAA CACCATTTTTCGACTTGAACCAGATTTCGATTCTTAAGGCACCGTTACAC ATACTTGTTAAAACATCCTCTTCCTAAGGCACAACCAAAGCAAGAAGTTA TAAAGCCACAAAAGCTGAAAATCAAAGAGCCAAAGATCACAAAGGGAAGG AGCTACAATAGAAAGGAATCTACCCTGAGACCTCACACCGGTTCAAAATC GAACTCAAAAGAAAGAGTTTTCAATGGATTTGTTGAAGACACAAGGCAGA AAACTAGCCATGTGTTTGATTTAAACCAGAATGGTAGAAGCTTAAGTAAA AAAGATGGTTCTTTTCATAGCTCTTCTGCTCCTGTGCTTGACTTGAATCA CAAAGAAAGGGTTCATAGTGGGAAAGAAGCCACAAAGAAAAGTGTAACAC CATTTTTCGACTTGAACCAGATTTCGAGAGAAGAGGAGGAATTAGAGGGA AACAATCAGCCAATGTGGATTGAAGAACAAAAGAAGAGTAGTACACAAAG AGGTGTGAATGAGGAACAGCACAATGATATCAAGCTTTCAGTTTGTAGAA ACCTTGGAGAAGGATCAAGTAGAGCAGGGAAAAGGAAGATCACATGGCAA GACCAAGTGGCATTAAGGGTTTGAAGAGAAGAGGAGGAATTAGAGGGAAA CAATCAGCCAATGTGGATTGAAGAACAAAAGAAGAGTAGTACACAAAGAG GTGTGAATGAGGAACAGCACAATGATATCAAGCTTTCAGTTTGTAGAAAC CTTGGAGAAGGATCAAGTAGAGCAGGGAAAAGGAAGATCACATGGCAAGA CCAAGTGGCATTAAGGGTTTGA back to top
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