Psat6g000240.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Psat6g000240.1 vs. DB:Swiss
Match: 4CLL5_ARATH (4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana OX=3702 GN=4CLL5 PE=1 SV=2) HSP 1 Score: 635.565 bits (1638), Expect = 0.000e+0 Identity = 323/455 (70.99%), Postives = 384/455 (84.40%), Query Frame = 1 Query: 28 SSIDPRSGFCSSNSIFYSKRKPLSLPPNHSLHATTFISSRAHHGNIAFIDASTGRQFTYQQLWRAVDSVTSSLSTMGIRKGDVILLLSPNSIYFPIVCLSVMSLGAVITTTNPLNTTSEIAKQIADSKPVLAFTTSQLVSKITGASPSLPIILMETERNSS--STNTLEKMMEKEPELSRLSRVSERVNQDDTATLLYSSGTTGPSKGVVSSHKNLIAMVQIVMSRFSKEEEDHGETFICTVPMFHIYGLAVFATGLLALGSTIVVLSKFEMHDLLSSIEKFRSSFLPLVPPILVAMLNNADAINSKYDLSSLHTVLSGGAPLSKQVTEGFIEKYPNVKILQGYXXXXXXXXXXXXXXXXXXRRYGTAGLVSSSTEAMIVDTETGQPLPVNRTGELWLRGPTIMKGYFSNEEATTSTINPEGWLRTGDVCYIDNDGFLFVVDRLKELIKYKGYQV 1386 +S++ RSGFC+SNS FYSKR P+ LPPN SL TTFISS+AH G IAFIDASTG+ T+ +LWRAV+SV LS +GIRKG V+LLLSPNSI FP+VCLSVMSLGA+ITTTNPLNT++EIAKQI DS PVLAFTTSQL+ KI+ A+ LPI+LM+ ER S L +MM+KEP +RV ERV+QDDTATLLYSSGTTG SKGV+SSH+NLIAMVQ +++RF +D + FICTVPMFHIYGLA FATGLLA GSTI+VLSKFEMH+++S+I K++++ LPLVPPILVAM+N AD I +KYDLSS+HTVL GGAPLSK+VTEGF EKYP VKILQGYGLTES+G+G+ST+++EESRRYGTAG +S+S E IVD TGQ L +TGELWL+GP+IMKGYFSNEEAT+ST++ EGWLRTGD+CYID DGF+FVVDRLKELIKYKGYQV Sbjct: 2 ASVNSRSGFCNSNSTFYSKRTPIPLPPNPSLDVTTFISSQAHRGRIAFIDASTGQNLTFTELWRAVESVADCLSEIGIRKGHVVLLLSPNSILFPVVCLSVMSLGAIITTTNPLNTSNEIAKQIKDSNPVLAFTTSQLLPKISAAAKKLPIVLMDEERVDSVGDVRRLVEMMKKEPS---GNRVKERVDQDDTATLLYSSGTTGMSKGVISSHRNLIAMVQTIVNRFG--SDDGEQRFICTVPMFHIYGLAAFATGLLAYGSTIIVLSKFEMHEMMSAIGKYQATSLPLVPPILVAMVNGADQIKAKYDLSSMHTVLCGGAPLSKEVTEGFAEKYPTVKILQGYGLTESTGIGASTDTVEESRRYGTAGKLSASMEGRIVDPVTGQILGPKQTGELWLKGPSIMKGYFSNEEATSSTLDSEGWLRTGDLCYIDEDGFIFVVDRLKELIKYKGYQV 451
BLAST of Psat6g000240.1 vs. DB:Swiss
Match: 4CLL4_ARATH (4-coumarate--CoA ligase-like 4 OS=Arabidopsis thaliana OX=3702 GN=4CLL4 PE=2 SV=1) HSP 1 Score: 555.444 bits (1430), Expect = 0.000e+0 Identity = 285/458 (62.23%), Postives = 346/458 (75.55%), Query Frame = 1 Query: 34 IDPRSGFCSSNSIFYSKRKPLSLPPNHSLHATTFISSRAHHGNIAFIDASTGRQFTYQQLWRAVDSVTSSL-STMGIRKGDVILLLSPNSIYFPIVCLSVMSLGAVITTTNPLNTTSEIAKQIADSKPVLAFTTSQLVSKITGASPSLPIILMETERNSSSTNT------LEKMMEKEPELSRLSRVSERVNQDDTATLLYSSGTTGPSKGVVSSHKNLIAMVQIVMSRFSKEEEDHGETFICTVPMFHIYGLAVFATGLLALGSTIVVLSKFEMHDLLSSIEKFRSSFLPLVPPILVAMLNNADAINSKYDLSSLHTVLSGGAPLSKQVTEGFIEKYPNVKILQGYXXXXXXXXXXXXXXXXXXRRYGTAGLVSSSTEAMIVDTETGQPLPVNRTGELWLRGPTIMKGYFSNEEATTSTINPEGWLRTGDVCYIDNDGFLFVVDRLKELIKYKGYQV 1386 +DPRSGFC SNS FYSKR+PLSLPPN S TTFISS+ H G AFIDA+TG+ T+ LWRAVD V L +GIR+GDV+L+LSPNSI+ P+VCLSVMSLGAV TT N LNT+ EI+KQIADS P L FTT QL K+ A + ++L + E T+ L +M++KEP R V +RVNQDDTA +LYSSGTTGPSKGV+SSH+NL A V +RF + + FICTVPMFH YGL FA G +ALGST+V+L +F++HD++ ++EK R++ L L PP+LVAM+N+AD I +KYDLSSL TV GGAPLSK+VTEGF+EKYP V ILQGY LTES+G G+ T S EESRRYGTAG ++S EA IVD TG+ + +N+TGELWL+GP+I KGYF N+EAT TIN EGWL+TGD+CYID DGFLFVVDRLKELIKYKGYQV Sbjct: 10 VDPRSGFCKSNSTFYSKRQPLSLPPNLSRDVTTFISSQPHRGKTAFIDAATGQCLTFSDLWRAVDRVADCLYHEVGIRRGDVVLILSPNSIFIPVVCLSVMSLGAVFTTANTLNTSGEISKQIADSNPTLVFTTRQLAPKLPVA---ISVVLTDDEVYQELTSAIRVVGILSEMVKKEPSGQR---VRDRVNQDDTAMMLYSSGTTGPSKGVISSHRNLTAHV----ARFISDNLKRDDIFICTVPMFHTYGLLTFAMGTVALGSTVVILRRFQLHDMMDAVEKHRATALALAPPVLVAMINDADLIKAKYDLSSLKTVRCGGAPLSKEVTEGFLEKYPTVDILQGYALTESNGGGAFTNSAEESRRYGTAGTLTSDVEARIVDPNTGRFMGINQTGELWLKGPSISKGYFKNQEATNETINLEGWLKTGDLCYIDEDGFLFVVDRLKELIKYKGYQV 457
BLAST of Psat6g000240.1 vs. DB:Swiss
Match: 4CLL2_ARATH (4-coumarate--CoA ligase-like 2 OS=Arabidopsis thaliana OX=3702 GN=4CLL2 PE=2 SV=2) HSP 1 Score: 552.362 bits (1422), Expect = 0.000e+0 Identity = 281/470 (59.79%), Postives = 357/470 (75.96%), Query Frame = 1 Query: 4 EIQGDNLNSSIDPRSGFCSSNSIFYSKRKPLSLPPNHSLHATTFISSRAHHGNIAFIDASTGRQFTYQQLWRAVDSVTSSLSTMGIRKGDVILLLSPNSIYFPIVCLSVMSLGAVITTTNPLNTTSEIAKQIADSKPVLAFTTSQLVSKITGASP-SLPIILMETERNSSST--------NTLEKMMEKEPELSRLSRVSERVNQDDTATLLYSSGTTGPSKGVVSSHKNLIAMVQIVMSRFSKEEEDHGETFICTVPMFHIYGLAVFATGLLALGSTIVVLSKFEMHDLLSSIEKFRSSFLPLVPPILVAMLNNADAINSKYDLSSLHTVLSGGAPLSKQVTEGFIEKYPNVKILQGYXXXXXXXXXXXXXXXXXXRRYGTAGLVSSSTEAMIVDTETGQPLPVNRTGELWLRGPTIMKGYFSNEEATTSTINPEGWLRTGDVCYIDNDGFLFVVDRLKELIKYKGYQV 1386 EI+ L ++D +SGFC S SIFYSKR+P++LPPN L T+FI+S+ H G F+DA TGR+ ++ +LW V+ V L +G+RKG+V+++LSPNSI FPIV LSVMSLGA+ITT NP+NT+ EI+KQI DS+PVLAFTT +LVSK+ AS +LP++LM+ S + LE M+E EP SRV +RVNQDDTA LLYSSGTTG SKGV+ SH+NLIA+VQ +RF E+ ICT+PM HI+G FATGL+ALG TIVVL KF+M LLS++E RSS+L LVPPI+VAM+N A+ INSKYDLSSLHTV++GGAPLS++VTE F+E YP VKILQGYGLTES+ + +S + EE++RYG +GL++ + E IVD +TG+ L VN+TGELW+R PT+MKGYF N+EAT STI+ EGWL+TGD+CYID DGF+FVVDRLKELIK GYQV Sbjct: 13 EIESRTL--AVDRKSGFCESTSIFYSKREPMALPPNQFLDVTSFIASQPHRGKTVFVDAVTGRRLSFPELWLGVERVAGCLYALGVRKGNVVIILSPNSILFPIVSLSVMSLGAIITTANPINTSDEISKQIGDSRPVLAFTTCKLVSKLAAASNFNLPVVLMDDYHVPSQSYGDRVKLVGRLETMIETEPS---ESRVKQRVNQDDTAALLYSSGTTGTSKGVMLSHRNLIALVQAYRARFGLEQRT-----ICTIPMCHIFGFGGFATGLIALGWTIVVLPKFDMAKLLSAVETHRSSYLSLVPPIVVAMVNGANEINSKYDLSSLHTVVAGGAPLSREVTEKFVENYPKVKILQGYGLTESTAIAASMFNKEETKRYGASGLLAPNVEGKIVDPDTGRVLGVNQTGELWIRSPTVMKGYFKNKEATASTIDSEGWLKTGDLCYIDGDGFVFVVDRLKELIKCNGYQV 472
BLAST of Psat6g000240.1 vs. DB:Swiss
Match: 4CLL3_ARATH (4-coumarate--CoA ligase-like 3 OS=Arabidopsis thaliana OX=3702 GN=4CLL3 PE=2 SV=2) HSP 1 Score: 521.931 bits (1343), Expect = 0.000e+0 Identity = 271/460 (58.91%), Postives = 335/460 (72.83%), Query Frame = 1 Query: 34 IDPRSGFCSSNSIFYSKRKPLSLPPNHSLHATTFISSRAHHGNIAFIDASTGRQFTYQQLWRAVDSVTSSL-STMGIRKGDVILLLSPNSIYFPIVCLSVMSLGAVITTTNPLNTTSEIAKQIADSKPVLAFTTSQLVSKITGASPSLPIILMETERNSSSTNT--------LEKMMEKEPELSRLSRVSERVNQDDTATLLYSSGTTGPSKGVVSSHKNLIAMVQIVMSRFSKEEEDHGETFICTVPMFHIYGLAVFATGLLALGSTIVVLSKFEMHDLLSSIEKFRSSFLPLVPPILVAMLNNADAINSKYDLSSLHTVLSGGAPLSKQVTEGFIEKYPNVKILQGYXXXXXXXXXXXXXXXXXXRRYGTAGLVSSSTEAMIVDTETGQPLPVNRTGELWLRGPTIMKGYFSNEEATTSTINPEGWLRTGDVCYIDNDGFLFVVDRLKELIKYKGYQV 1386 +DPRSGFC SNS FYSKR PL LPPN SL TTFISS+ G AFIDASTG + T+ LWR VD V L +GIR+GDV+L+LSPNSIY P+VCLSVMSLGAV+TT N LNT+ EI+KQIA S P L FTTSQL K+ A + ++L + E T L +MM+KE + RV +RVNQDDTA +LYSSGTTG SKGV+SSH+NL A V +++ ++ E F+CTVPMFH +GL FA G +A GST+V+L +F + D++ ++EK++++ L L PP+LVAM+N AD + +KYDL+SL V GGAPLSK+V + F+EKYP V I QGY LTES G G+STES+EES +YG GL+SS EA IVD +TG+ + VN+ GELWL+GP+I KGYF NEEAT TIN EGWL+ GD+CYID DGFLFVVDRLKELIKYKGYQV Sbjct: 10 VDPRSGFCKSNSTFYSKRNPLCLPPNPSLDVTTFISSQPQRGTTAFIDASTGHRLTFSDLWRVVDRVADCLYHEVGIRRGDVVLILSPNSIYIPVVCLSVMSLGAVVTTANTLNTSGEISKQIAQSNPTLVFTTSQLAPKLAAA---ISVVLTDEEDEKRVELTSGVRVVGILSEMMKKE---TSGQRVRDRVNQDDTAMMLYSSGTTGTSKGVISSHRNLTAYV----AKYIDDKWKRDEIFVCTVPMFHSFGLLAFAMGSVASGSTVVILRRFGLDDMMQAVEKYKATILSLAPPVLVAMINGADQLKAKYDLTSLRKVRCGGAPLSKEVMDSFLEKYPTVNIFQGYALTESHGSGASTESVEESLKYGAVGLLSSGIEARIVDPDTGRVMGVNQPGELWLKGPSISKGYFGNEEATNETINLEGWLKLGDLCYIDEDGFLFVVDRLKELIKYKGYQV 459
BLAST of Psat6g000240.1 vs. DB:Swiss
Match: 4CLL4_ORYSJ (4-coumarate--CoA ligase-like 4 OS=Oryza sativa subsp. japonica OX=39947 GN=4CLL4 PE=2 SV=1) HSP 1 Score: 511.531 bits (1316), Expect = 2.695e-177 Identity = 262/463 (56.59%), Postives = 347/463 (74.95%), Query Frame = 1 Query: 13 GDNLNSSIDPRSGFCSSNSIFYSKRKPLSLPPNHSLHATTFISSRAHHGNIAFIDASTGRQFTYQQLWRAVDSVTSSLST--MGIRKGDVILLLSPNSIYFPIVCLSVMSLGAVITTTNPLNTTSEIAKQIADSKPVLAFTTSQLVSKITGASPSLPIILMETER---NSSSTNTLEKMMEKEPELSRLSRVSERVNQDDTATLLYSSGTTGPSKGVVSSHKNLIAMVQIVMSRFSKEEEDHGETFICTVPMFHIYGLAVFATGLLALGSTIVVLSKFEMHDLLSSIEKFRSSFLPLVPPILVAMLNNADAINSKYDLSSLHTVLSGGAPLSKQVTEGFIEKYPNVKILQGYXXXXXXXXXXXXXXXXXXRRYGTAGLVSSSTEAMIVDTETGQPLPVNRTGELWLRGPTIMKGYFSNEEATTSTINPEGWLRTGDVCYIDNDGFLFVVDRLKELIKYKGYQV 1386 G + +D RSG+C++ F S+R + LP + + +F++SR H G +A +DA+TGR+ T+ +LWRAV S+L+ + +RKG V L+LSPNS++FP+ L+ MSLGAV+TT NPLNT +EIAKQ+AD++PVLAFTT +L+ K+ A L ++L+E+ R +SS + + E +R +RV QDD ATLLYSSGTTGPSKGVV++H++LI+MVQI+M+RF E D ETF+CTVPMFH+YGL FATGLL G+T+VVLSK+E+ ++L SI + ++LPLVPPILVAM+ + + L + VLSGGAPL K++ EGF EKYP V+ILQGYGLTES+ +G+ST+S EESRRYGTAGL+S +TEA IVD ++G+ LPVNRTGELW+RGP +MKGYF N EAT ST+ P+GWL+TGD+CYID DG+LFVVDRLKELIKYKGYQV Sbjct: 2 GRSPEMEVDARSGYCAATRTFRSRRADVPLPADPEVDVVSFLASRRHSGVVALVDAATGRRITFTELWRAVAGAASALAAHPVSLRKGHVALILSPNSVHFPVAALAAMSLGAVLTTANPLNTPAEIAKQVADARPVLAFTTRELLPKLPRAH-DLRVVLLESARLPGDSSDPRIVATIEEISATTPDPARRKDRVTQDDPATLLYSSGTTGPSKGVVATHRSLISMVQIIMTRFRLEGSDKTETFLCTVPMFHVYGLVAFATGLLGCGATVVVLSKYELPEMLRSINAYGVTYLPLVPPILVAMVAHPKPL----PLGQMRKVLSGGAPLGKELIEGFREKYPQVEILQGYGLTESTAIGASTDSAEESRRYGTAGLLSPNTEAKIVDPDSGEALPVNRTGELWIRGPYVMKGYFKNAEATQSTLTPDGWLKTGDLCYIDEDGYLFVVDRLKELIKYKGYQV 459
BLAST of Psat6g000240.1 vs. DB:Swiss
Match: 4CLL8_ARATH (4-coumarate--CoA ligase-like 8 OS=Arabidopsis thaliana OX=3702 GN=4CLL8 PE=2 SV=2) HSP 1 Score: 502.671 bits (1293), Expect = 7.807e-174 Identity = 271/462 (58.66%), Postives = 336/462 (72.73%), Query Frame = 1 Query: 25 NSSIDPRSGFCSSNSIFYSKRKPLSLPPNHSLHATTFISSRAHHGNIAFIDASTGRQFTYQQLWRAVDSVTSSL-STMGIRKGDVILLLSPNSIYFPIVCLSVMSLGAVITTTNPLNTTSEIAKQIADSKPVLAFTTSQLVSKITGASPSLPIILMETE------RNSSSTNTLEKMMEKEPELSRLSRVSERVNQDDTATLLYSSGTTGPSKGVVSSHKNLIAMVQIVMSRFSKEE-EDHGETFICTVPMFHIYGLAVFATGLLALGSTIVVLSKFEMHDLLSSIEKFRSSFLPLVPPILVAMLNNADAINSKYDLSSLHTVLSGGAPLSKQVTEGFIEKYPNVKILQGYXXXXXXXXXXXXXXXXXXRRYGTAGLVSSSTEAMIVDTETGQPLPVNRTGELWLRGPTIMKGYFSNEEATTSTINPEGWLRTGDVCYIDNDGFLFVVDRLKELIKYKGYQV 1386 +S IDPR+GFC+SNS FYSKRKPL+LP SL TTFISS+ + G AFIDA+T + ++ LW AVD V L +GIR+GDV+L+LSPN+I PIVCLSVMSLGAV+TT NPLNT SEI +QIADS P LAFTT +L KI AS + I+L E R L +MM+KEP V +V++DDTA LLYSSGTTG SKGV SSH NLIA V +R+ E E +TFICTVP+FH +GL F LALG+T+V+L +F++ ++++++EK+R++ L LVPP+LV M+N AD I KYD+S L TV GGAPLSK+VT+GF++KYP V + QGY LTES+G G+S ES+EESRRYG GL+S EA IVD TGQ + +N+TGELWL+GP+I KGYF NEE I EGWL+TGD+CYIDNDGFLF+VDRLKELIKYKGYQV Sbjct: 8 SSLIDPRNGFCTSNSTFYSKRKPLALPSKESLDITTFISSQTYRGKTAFIDAATDHRISFSDLWMAVDRVADCLLHDVGIRRGDVVLVLSPNTISIPIVCLSVMSLGAVLTTANPLNTASEILRQIADSNPKLAFTTPELAPKI--ASSGISIVLERVEDTLRVPRGLKVVGNLTEMMKKEPSGQA---VRNQVHKDDTAMLLYSSGTTGRSKGVNSSHGNLIAHV----ARYIAEPFEQPQQTFICTVPLFHTFGLLNFVLATLALGTTVVILPRFDLGEMMAAVEKYRATTLILVPPVLVTMINKADQIMKKYDVSFLRTVRCGGAPLSKEVTQGFMKKYPTVDVYQGYALTESNGAGASIESVEESRRYGAVGLLSCGVEARIVDPNTGQVMGLNQTGELWLKGPSIAKGYFRNEE---EIITSEGWLKTGDLCYIDNDGFLFIVDRLKELIKYKGYQV 457
BLAST of Psat6g000240.1 vs. DB:Swiss
Match: 4CLL6_ARATH (4-coumarate--CoA ligase-like 6 OS=Arabidopsis thaliana OX=3702 GN=4CLL6 PE=2 SV=2) HSP 1 Score: 333.954 bits (855), Expect = 1.150e-107 Identity = 181/460 (39.35%), Postives = 295/460 (64.13%), Query Frame = 1 Query: 37 DPRSGFCSSNSIFYSKRKPLSLPPNHSLHATTFISSRAHHGNIAFIDASTGRQFTYQQLWRAVDSVTSSL-STMGIRKGDVILLLSPNSIYFPIVCLSVMSLGAVITTTNPLNTTSEIAKQIADSKPVLAFTTSQLVSKITGASPSLPIILMETERNSSSTNTLEKMMEKEPELSRLSRVS------ERVNQDDTATLLYSSGTTGPSKGVVSSHKNLIAMVQIVMSRFSKEEEDH---GETFICTVPMFHIYGLAVFATGLLALGSTIVVLSKFEMHDLLSSIEKFRSSFLPLVPPILVAMLNNADAINSKYDLSSLHTVLSGGAPLSKQVTEGFIEKYPNVKILQGYXXXXXXXXXXXXXXXXXXRRYGTAGLVSSSTEAMIVDTETGQPLPVNRTGELWLRGPTIMKGYFSNEEATTSTINPEGWLRTGDVCYIDNDGFLFVVDRLKELIKYKGYQV 1386 +P F S I+ SK L LP + +L A + + S HHG+ A ID+ TG ++ +L V S+ + + +G+R+GDV+ L+ PNS+YFP++ LS++SLGA++TT NP ++ EI KQ+++ LAFT+++ V K++ SL + ++ S + + + + P+ + + S + QDD A ++YSSGTTG SKGV+ +H+NLIA +++ + RF + ++ ++ +P+ HIYGL++F GLL+LGSTIVV+ +F+ D+++ IE+F+ + P+VPP+L+A+ A + + SL V SG APLS++ E F++ P+V ++QGYG+TES+ VG+ + E+ RY + GL++ + +A +VD +G LP GELW++GP +MKGY +N +AT +I + WLRTGD+ Y D DG+LF+VDR+KE+IKYKG+Q+ Sbjct: 20 NPPFWFSSKTGIYTSKFPSLHLPVDPNLDAVSALFSHKHHGDTALIDSLTGFSISHTELQIMVQSMAAGIYHVLGVRQGDVVSLVLPNSVYFPMIFLSLISLGAIVTTMNPSSSLGEIKKQVSECSVGLAFTSTENVEKLS----SLGVSVISV----SESYDFDSIRIENPKFYSIMKESFGFVPKPLIKQDDVAAIMYSSGTTGASKGVLLTHRNLIASMELFV-RFEASQYEYPGSSNVYLAALPLCHIYGLSLFVMGLLSLGSTIVVMKRFDASDVVNVIERFKITHFPVVPPMLMALTKKAKGVCGEV-FKSLKQVSSGAAPLSRKFIEDFLQTLPHVDLIQGYGMTESTAVGTRGFNSEKLSRYSSVGLLAPNMQAKVVDWSSGSFLPPGNRGELWIQGPGVMKGYLNNPKATQMSIVEDSWLRTGDIAYFDEDGYLFIVDRIKEIIKYKGFQI 469
BLAST of Psat6g000240.1 vs. DB:Swiss
Match: 4CLL7_ARATH (4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana OX=3702 GN=4CLL7 PE=1 SV=1) HSP 1 Score: 332.028 bits (850), Expect = 3.871e-107 Identity = 191/457 (41.79%), Postives = 278/457 (60.83%), Query Frame = 1 Query: 43 RSGFCSSNSIFYSKRKPLSLP--PNHSLHATTFISSRAHHGNIAFIDASTGRQFTYQQLWRAVDSVTSSLSTMGIRKGDVILLLSPNSIYFPIVCLSVMSLGAVITTTNPLNTTSEIAKQIADSKPVLAFTTSQLVSKITGASPSLPIILMETER-------NSSSTNTLEKMMEKEPELSRLSRVSERVNQDDTATLLYSSGTTGPSKGVVSSHKNLIAMVQIVMSRFSKEEEDHGETFICTVPMFHIYGLAVFATGLLALGSTIVVLSKFEMHDLLSSIEKFRSSFLPLVPPILVAMLNNADAINSKYDLSSLHTVLSGGAPLSKQVTEGFIEKYPNVKILQGYXXXXXXXXXXXXXXXXXXRRYGTAGLVSSSTEAMIVDTETGQPLPVNRTGELWLRGPTIMKGYFSNEEATTSTINPEGWLRTGDVCYIDNDGFLFVVDRLKELIKYKGYQV 1386 +SG+ + I+ S R L LP PN SL + F +S ++ +A D+ TG T+ QL AV + +GIRK DV+L+ +PNS FP+ L+V ++G V TT NPL T +E++KQI DS P + + +QL KI G LP++L+ ++ ++S + + +ME +S V + Q DTA LLYSSGTTG SKGV +H N IA +V E HG F+C +PMFH++GLAV L G+ +V +++FE+ +L +IEKFR + L +VPP+ +A+ + +I K+DLSSL + SG APL K + E PNV ++QGYG+TE+ G+ S + R G+AG+++ EA IV ETG+ P N+ GE+W+RGP +MKGY +N +AT TI+ + W+ TGD+ Y + DG L+VVDR+KELIKYKG+QV Sbjct: 3 KSGY-GRDGIYRSLRPTLVLPKDPNTSLVSFLFRNSSSYPSKLAIADSDTGDSLTFSQLKSAVARLAHGFHRLGIRKNDVVLIFAPNSYQFPLCFLAVTAIGGVFTTANPLYTVNEVSKQIKDSNPKIIISVNQLFDKIKGFD--LPVVLLGSKDTVEIPPGSNSKILSFDNVMELSEPVSEYPFV--EIKQSDTAALLYSSGTTGTSKGVELTHGNFIAASLMVTMDQDLMGEYHG-VFLCFLPMFHVFGLAVITYSQLQRGNALVSMARFELELVLKNIEKFRVTHLWVVPPVFLAL--SKQSIVKKFDLSSLKYIGSGAAPLGKDLMEECGRNIPNVLLMQGYGMTETCGIVSVEDPRLGKRNSGSAGMLAPGVEAQIVSVETGKSQPPNQQGEIWVRGPNMMKGYLNNPQATKETIDKKSWVHTGDLGYFNEDGNLYVVDRIKELIKYKGFQV 451
BLAST of Psat6g000240.1 vs. DB:Swiss
Match: 4CLL9_ARATH (4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana OX=3702 GN=4CLL9 PE=1 SV=2) HSP 1 Score: 330.872 bits (847), Expect = 1.794e-106 Identity = 192/466 (41.20%), Postives = 290/466 (62.23%), Query Frame = 1 Query: 34 IDPRSGFCSSNSIFYSKRKPLSLPP-NHSLHATTFI-------SSRAHHG-NIA----FIDASTGRQFTYQQLWRAVDSVTSSLSTM--GIRKGDVILLLSPNSIYFPIVCLSVMSLGAVITTTNPLNTTSEIAKQIADSKPVLAFTTSQLVSKITGASPSLPIILMETERNSSSTNTLEKMMEKEPELSRLSRVSERVNQDDTATLLYSSGTTGPSKGVVSSHKNLIAMVQIVMSRFSKEEEDHGETFICTVPMFHIYGLAVFATGLLALGSTIVVLSKFEMHDLLSSIEKFRSSFLPLVPPILVAMLNNADAINSKYDLSSLHTVLSGGAPLSKQVTEGFIEKYPNVKILQGYXXXXXXXXXXXXXXXXXXRRYGTAGLVSSSTEAMIVDTETGQPLPVNRTGELWLRGPTIMKGYFSNEEATTSTINPEGWLRTGDVCYIDNDGFLFVVDRLKELIKYKGYQV 1386 ID SGF I++S R LSLPP + L A F S A G NI +++S+G TY +L R V S+ SL + +V +LSP+S+ P++ L++MS+G V++ NP+ + SE++ Q+ S+PV+AF TSQ V K+ +S L +LM++ S N + S ++ +VNQ D A +L+SSGTTG KGV+ +H+NLIA + R ++ ++ + ++P+FH++G + + +LG T+V+L +FE+ + ++EK++ + +P+ PP++VA++ + + KYDL SL ++ GGAPL K + E F +K+P+V I+QGYGLTESSG +ST EE +YG+ G +S + EA IVD TG+ LP +TGELWLRGP IMKGY NE+A+ T++ EGWL+TGD+CY D++ FL++VDRLKELIKYK YQV Sbjct: 11 IDRSSGFDQRTGIYHSLRPSLSLPPIDQPLSAAEFALSLLLKSSPPATAGKNIEALTYLVNSSSGDNLTYGELLRRVRSLAVSLRERFPSLASRNVAFILSPSSLDIPVLYLALMSIGVVVSPANPIGSESEVSHQVEVSEPVIAFATSQTVKKLQSSSLPLGTVLMDSTEFLSWLNRSDS--------SSVNPFQVQVNQSDPAAILFSSGTTGRVKGVLLTHRNLIASTAVSHQRTLQDPVNYDRVGLFSLPLFHVFGFMMMIRAI-SLGETLVLLGRFELEAMFKAVEKYKVTGMPVSPPLIVALVKSE--LTKKYDLRSLRSLGCGGAPLGKDIAERFKQKFPDVDIVQGYGLTESSGPAASTFGPEEMVKYGSVGRISENMEAKIVDPSTGESLPPGKTGELWLRGPVIMKGYVGNEKASAETVDKEGWLKTGDLCYFDSEDFLYIVDRLKELIKYKAYQV 465
BLAST of Psat6g000240.1 vs. DB:Swiss
Match: 4CLL1_ORYSJ (4-coumarate--CoA ligase-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=4CLL1 PE=2 SV=2) HSP 1 Score: 300.056 bits (767), Expect = 1.055e-94 Identity = 189/464 (40.73%), Postives = 279/464 (60.13%), Query Frame = 1 Query: 40 PRSGFCSSNSIFYSKRKPLSLPPNHSLHATTFISSRAH---HGNIAFIDASTGRQFTYQQLWRAVDSVTSSLST-MGIRKGDVILLLSPNSIYFPIVCLSVMSLGAVITTTNPLNTTSEIAKQIADSKPVLAFTTSQLVSKITGASPSLPIILMETERNS-------SSTNTLEKMM---EKEPELSRLSRVSERVNQDDTATLLYSSGTTGPSKGVVSSHKNLIAMVQIVMSRFSKEEEDHGETFICTVPMFHIYGLAVFATGLLALGSTIVVLSKFEMHDLLSSIEKFRSSFLPLVPPILVAMLNNADAINSKYDLSSLHTVLSGGAPLSKQVTEGFIEKYPNVKILQGYXXXXXXXXXXXXX-XXXXXRRYGTAGLVSSSTEAMIVDTETGQPLPVNRTGELWLRGPTIMKGYFSNEEATTSTINPEGWLRTGDVCYIDNDGFLFVVDRLKELIKYKGYQV 1386 P +G+ ++ ++ S R P + + L T + RA A+ GR T+ +L AV S +LS+ G+R GD +LLL+PN + +P+ +V +LGAV TT NP T EIAKQ++D++ L T S LV KI G LP+IL++ + N+ +T TL + KE + R + Q DTA LLYSSGTTG SKGV+ +H+N IA ++V S E + F+C +PMFHI+GL+V L G+ I+ +S+F+++ L+ ++++ R + L VPP+++A+ + A KYDLSSL + SG APL K V E +K+P+ +I+QGYG+TE+ G+ S ++R +G+ G + S EA IVD +T + LP N+ GE+ +RGP +M+GYF+N +AT TI +GWL TGD+ Y D G LFVVDRLKELIKYKG+Q+ Sbjct: 7 PAAGY-GADGVYRSLRPPAPVASDPGLSLTDLLLRRADACPSAVALADAAAGGRALTFAELRSAVLSTAVALSSRAGVRPGDAVLLLAPNCVLYPVCFFAVTALGAVGTTVNPDYTPREIAKQVSDARAKLVITISALVPKIAGL--RLPVILLDDDANAAAASLPPDATVTLYTNLVAGVKEADYRR-----PPIKQSDTAALLYSSGTTGDSKGVILTHRNFIAAARMVTSD-QDERREGPNVFLCFLPMFHIFGLSVITYAQLHRGNAIIAMSRFDINSLMEAVQRHRVTHLFCVPPVIIALAKHGKA--GKYDLSSLKFIGSGAAPLGKDVMEVVAKKFPDSEIVQGYGMTETCGIISLEYPEKGQAREFGSTGTLVSGVEAKIVDIKTLKHLPPNQVGEICVRGPNVMQGYFNNVQATEFTIK-QGWLHTGDLGYFDGGGQLFVVDRLKELIKYKGFQI 458 The following BLAST results are available for this feature:
BLAST of Psat6g000240.1 vs. DB:Swiss
Analysis Date: 2019-09-12 (BLAST: P. sativum Cameor genome v1a vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: P. sativum Cameor genome v1a
Date Performed: 2019-09-12
Sequences
The
following sequences are available for this feature:
mRNA sequence >Psat6g000240.1_Ps_Cameor_v1a ID=Psat6g000240.1_Ps_Cameor_v1a; Name=Psat6g000240.1; organism=Pisum sativum; type=mRNA; length=4210bpback to top protein sequence of Psat6g000240.1_Ps_Cameor_v1a >Psat6g000240.1_Ps_Cameor_v1a ID=Psat6g000240.1_Ps_Cameor_v1a; Name=Psat6g000240.1_Ps_Cameor_v1a; organism=Pisum sativum; type=polypeptide; length=475bpback to top mRNA from alignment at chr6LG2:336316..340525- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Psat6g000240.1_Ps_Cameor_v1a ID=Psat6g000240.1_Ps_Cameor_v1a; Name=Psat6g000240.1; organism=Pisum sativum; type=mRNA; length=4210bp; location=Sequence derived from: chr6LG2:336316..340525- (Pisum sativumback to top Coding sequence (CDS) from alignment at chr6LG2:336316..340525- >Psat6g000240.1_Ps_Cameor_v1a ID=Psat6g000240.1_Ps_Cameor_v1a; Name=Psat6g000240.1; organism=Pisum sativum; type=CDS; length=2850bp; location=Sequence derived from: chr6LG2:336316..340525- (Pisum sativumback to top |