Psat6g004240.3
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Psat6g004240.3 vs. DB:Swiss
Match: DEAH5_ARATH (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Arabidopsis thaliana OX=3702 GN=At3g26560 PE=1 SV=2) HSP 1 Score: 1768.82 bits (4580), Expect = 0.000e+0 Identity = 869/963 (90.24%), Postives = 925/963 (96.05%), Query Frame = 1 Query: 784 GGSGEPELYMVYKGRISRVMDTGCFVQLDDLRGKEGLVHVSQMATRKIVNAKEVVKRDQQVYVKVISVSGSKLSLSMRDVDQHTGKDLLPLKKTSEEE-AFRTNPQ-DSKDGPVARTGLSGIRIVEEDDIGSTRRPLKRMSSPEIWEAKQLIASGVLSVSEYPTYDDEGDGVMYQXXXXXXXXXXXXXXXXPAFLQGQSRYSMDMSPVKIFKNPEGSLGRAAALQSALIKXXXXXXXXXXXTMLDSIPKDLNRPWEDPMPESGERHLAQELRGVGLSAYDMPEWKKDAYGKTITFGQRSKLSIQEQRQSLPIYKLKKELIQAVLDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILVDENLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPELRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSVPEIQRINLGMTTLSMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRARFFQPEGDHLTLLAVYESWKNKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDKYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRRA 3666 GG+ EPELY VYKGR++RVMD GCFVQ D RGKEGLVHVSQMATR++ AKE VKRD +VYVKVIS+S K SLSMRDVDQ+TG+DL+PL+K S+E+ + R+NP +KDG V +TG+SGIRIVEE+D+ +RRPLK+MSSPE WEAKQLIASGVL V E+P YD++GDG++YQEEGAEEELEIEMN+DEPAFLQGQ+RYS+DMSPVKIFKNPEGSL RAAALQSAL KERRE+REQQQRTMLDSIPKDLNRPWEDPMPE+GERHLAQELRGVGLSAYDMPEWKKDA+GKT TFGQRSKLSIQEQR+SLPIYKLKKELIQAV DNQVLVVIGETGSGKTTQVTQYLAEAGYTT+GKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREIL+DENLSQYSVIMLDEAHERTIHTDVLFGLLK+L+KRR +LRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPE+DYLDA+LITVLQIHLTEPEGDIL+FLTGQEEID ACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDP PPGKRKVVVATNIAEASLTIDGI+YV+DPGFAKQNVYNPKQGL+SLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEM PTS+PEIQRINLGMTTL+MKAMGINDLLSFDFMDPP PQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPL+PPLSKMLLASVDLGCSDEILT+IAMIQTGNIFYRPREKQAQADQKRA+FFQPEGDHLTLLAVYE+WK KNFSGPWCFENF+QSRSLRRAQDVRKQLL+IMDKYKLDVV+AGKNFTKIRKAITAGFFFH ARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYH+LVMTTKEYMREVTVIDPKWLVELAPRFFKV+DPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRRA Sbjct: 206 GGANEPELYQVYKGRVTRVMDAGCFVQFDKFRGKEGLVHVSQMATRRVDKAKEFVKRDMEVYVKVISISSDKYSLSMRDVDQNTGRDLIPLRKPSDEDDSSRSNPSYRTKDGQVTKTGISGIRIVEENDVAPSRRPLKKMSSPERWEAKQLIASGVLRVDEFPMYDEDGDGMLYQEEGAEEELEIEMNEDEPAFLQGQTRYSVDMSPVKIFKNPEGSLSRAAALQSALTKERREMREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAFGKTPTFGQRSKLSIQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTKGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDILVFLTGQEEIDSACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDPGFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTSIPEIQRINLGMTTLTMKAMGINDLLSFDFMDPPQPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLEPPLSKMLLASVDLGCSDEILTMIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFIQSRSLRRAQDVRKQLLSIMDKYKLDVVTAGKNFTKIRKAITAGFFFHGARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHDLVMTTKEYMREVTVIDPKWLVELAPRFFKVSDPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRRA 1168 HSP 2 Score: 116.701 bits (291), Expect = 6.712e-25 Identity = 64/106 (60.38%), Postives = 76/106 (71.70%), Query Frame = 1 Query: 37 KLDYLSLVSKVCTELESHTGTGDKVLAEFITDLGHSSESVEEFDSKLKENGAEMPDYFVRTLLTIIHAILXXXXXXXXXXXXXXSTSKTKFKALAISDDRDRAKEL 354 KL++LSLVS VC ELE+H G+ +KVLAEFI DLG SE+V+EFD LKE GAEMPDYFVR+LLT IH I P K K +K+ KFK LAI D +D+ KEL Sbjct: 8 KLNHLSLVSNVCNELETHLGSAEKVLAEFIIDLGRHSETVDEFDKNLKEAGAEMPDYFVRSLLTTIHGIY---PPKPKSEKKKEEGDDQKFKGLAIKDTKDKVKEL 110
BLAST of Psat6g004240.3 vs. DB:Swiss
Match: DHX8_DICDI (ATP-dependent RNA helicase dhx8 OS=Dictyostelium discoideum OX=44689 GN=dhx8 PE=3 SV=1) HSP 1 Score: 1353.96 bits (3503), Expect = 0.000e+0 Identity = 659/980 (67.24%), Postives = 804/980 (82.04%), Query Frame = 1 Query: 751 EKGSKERDSRHGGSGEPELYMVYKGRISRVMDTGCFVQLDDLRGK-EGLVHVSQMAT--RKIVNAKEVVKRDQQVYVKVISVSGSKLSLSMRDVDQHTGKDLLPLKKTSEEEAFRTNPQDSKDGPVARTGLSGIRIVEEDDIG----STRRPLKRMSSPEIWEAKQLIASGVLSVSEYPTYDDEGDGVMYQXXXXXXXXXXXXXXXXPAFLQGQSRYSMDMSPVKIFKNPEGSLGRAAALQSALIKXXXXXXXXXXXTMLDSIPKDLNRPWEDPMPESGERHLAQELRGVGLSAYD--MPEWKKDAYGKTITFGQRSKLSIQEQRQSLPIYKLKKELIQAVLDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILVDENLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPELRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSVPEIQRINLGMTTLSMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRARFFQPEGDHLTLLAVYESWKNKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDKYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRR 3663 ++ ++++ R EP LY +Y G++S + D GCFV L+ + G+ +GLVH+SQ+ + K+ + +VVKR+QQV VK++SV+ SK+SLSM+DVDQ TG+DL P + + TN +++ P + ++ +T + KR++SP+ W KQLIASG+LSV E P YD E V + EE EE+ +IE N+DEP FL+G +SP+KI K P GSL RAA+ Q+AL KER+E + QQ+ M+DSIPKDL+ PW DPMPE+GERHLAQE+R + D +PEWKK G I +G+ + SI+EQR+SLPI+ L++ +QAV ++Q+LVVIGETGSGKTTQ+ QYLAEAGY TRGKIGCTQPRRVAAMSV+KRVAEEFGC+LG+EVGYAIRFEDCT P+T+IK+MTDG+LLRE L+D NLS YSVI+LDEAHERTI TDVLFGLLKQ ++RRPEL++++TSATL+AEKFS YF N +F IPGRTFPV+I YTK PE+DYLDASLITV+QIHL+EP GDILLFLTGQEEID ACQ LYERMK LG NVP+LIILPVYSALPSEMQ++IF+PAPPG RKVV+ATNIAE SLTIDGI+YVIDPGF+KQ +NPK G+DSLV+ PISQA+A+QR+GRAGRTGPGKCYRLYTESA++NEM +S+PEIQR NLG T L+MKAMGINDLL+FDFMDPP Q L+SAMEQLYSLGALDEEGLLT+LGRKMAEFPLDP LSKML+ASVDLGCSDEILT++AM+ N+FYRP+EKQA ADQK+A+FFQPEGDHLTLL VYESWKN FS PWCFENFVQ+RSLRRAQDVRKQL+TIMD+YKLD++SAG+N+TKI+KAI +GFF +A++KDP EGY+TLVE QPVYIHPSS LF R PDWVIYHELVMTTKEYMREV IDPKWLVELAP+FFK +DP K+SKRKR+E+IEPLYD+Y++PN+WR SKR+ Sbjct: 183 DRDREQQNKRREIDKEPILYKIYDGKVSSINDYGCFVTLEGIAGRRDGLVHISQILSGRTKLNHPSDVVKRNQQVKVKILSVASSKISLSMKDVDQSTGRDLNPQQNI--QSIISTNSTNNRSNPFKPNNNNNNSSNNNNNDDDDKYTTSKNRKRIASPDRWGYKQLIASGILSVPEMPNYDKEVGLVNHDEEQPEEDFDIERNEDEPQFLKGTRMNMQQLSPIKIVKKPNGSLQRAASTQTALSKERKEEKNQQRNEMMDSIPKDLSLPWHDPMPEAGERHLAQEIRSIAGQGIDTEIPEWKKVTQGSHIQYGKATSRSIKEQRESLPIFPLREAFLQAVSEHQLLVVIGETGSGKTTQMAQYLAEAGYGTRGKIGCTQPRRVAAMSVSKRVAEEFGCQLGQEVGYAIRFEDCTSPETIIKFMTDGILLRECLLDPNLSAYSVIILDEAHERTISTDVLFGLLKQALQRRPELKVLITSATLEAEKFSKYFMNAQLFIIPGRTFPVDIRYTKDPEADYLDASLITVMQIHLSEPPGDILLFLTGQEEIDAACQILYERMKSLGSNVPDLIILPVYSALPSEMQTKIFEPAPPGSRKVVIATNIAETSLTIDGIYYVIDPGFSKQKCFNPKNGMDSLVVAPISQAAARQRSGRAGRTGPGKCYRLYTESAFKNEMLASSIPEIQRTNLGNTVLTMKAMGINDLLNFDFMDPPPVQTLVSAMEQLYSLGALDEEGLLTRLGRKMAEFPLDPQLSKMLIASVDLGCSDEILTVVAMLSVQNVFYRPKEKQALADQKKAKFFQPEGDHLTLLNVYESWKNSKFSNPWCFENFVQARSLRRAQDVRKQLITIMDRYKLDIISAGRNYTKIQKAICSGFFANASKKDPNEGYKTLVEGQPVYIHPSSTLFNRNPDWVIYHELVMTTKEYMREVCTIDPKWLVELAPKFFKTSDPNKISKRKRKEKIEPLYDKYNDPNAWRPSKRK 1160
BLAST of Psat6g004240.3 vs. DB:Swiss
Match: DHX8_MOUSE (ATP-dependent RNA helicase DHX8 OS=Mus musculus OX=10090 GN=Dhx8 PE=2 SV=1) HSP 1 Score: 1326.23 bits (3431), Expect = 0.000e+0 Identity = 638/957 (66.67%), Postives = 796/957 (83.18%), Query Frame = 1 Query: 796 EPELYMVYKGRISRVMDTGCFVQLDDLRGK-EGLVHVSQMATR-KIVNAKEVVKRDQQVYVKVISVSGSKLSLSMRDVDQHTGKDLLPLKKTSEEEAFRTNPQDSKDGPVARTGLSGIRIVEEDDIGSTRRPLKRMSSPEIWEAKQLIASGVLSVSEYPTYDDEGDGVMYQXXXXXXXXXXXXXXXXPAFLQGQSRYSMDMSPVKIFKNPEGSLGRAAALQSALIKXXXXXXXXXXXTMLDSIPKDLNRPWEDPMPESGERHLAQELRGVGLSAYDMPEWKKDAYG-KTITFGQRSKLSIQEQRQSLPIYKLKKELIQAVLDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILVDENLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPELRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSVPEIQRINLGMTTLSMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRARFFQPEGDHLTLLAVYESWKNKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDKYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRYHEPNSWRLSK 3657 EP + +Y G+++ +M GCFVQL+ LR + EGLVH+S++ ++ N +VV + Q+V VKV+S +G+K SLSM+DVDQ TG+DL P ++ + TN + S P T LS + E +D R+ L R+S PE WE KQ+IA+ VLS E+P +D+E + ++ +E+LEIE+ ++EP FL+G ++ SMDMSP+KI KNP+GSL +AA +QSAL KERRE+++ Q+ +DSIP LN+ W DP+P++ R +A +RG+G+ D+PEWKK A+G ++G+++++SI EQR+SLPIYKLK++L+QAV DNQ+L+VIGETGSGKTTQ+TQYLAEAGYT+RGKIGCTQPRRVAAMSVAKRV+EEFGC LG+EVGY IRFEDCT P+TVIKYMTDGMLLRE L+D +L+QY++IMLDEAHERTIHTDVLFGLLK+ V++R +++LIVTSATLDA KFS YF+ IFTIPGRT+PVEILYTK+PE+DYLDASLITV+QIHLTEP GDIL+FLTGQEEID AC+ LYERMK LG +VPELIILPVYSALPSEMQ+RIFDPAPPG RKVV+ATNIAE SLTIDGI+YV+DPGF KQ VYN K G+D LV+TPISQA AKQRAGRAGRTGPGKCYRLYTE AYR+EM T+VPEIQR NL T LS+KAMGINDLLSFDFMD P + LI+AMEQLY+LGALD+EGLLT+LGR+MAEFPL+P L KML+ SV LGCS+E+LTI++M+ N+FYRP++KQA ADQK+A+F Q EGDHLTLLAVY SWKN FS PWC+ENF+Q+RSLRRAQD+RKQ+L IMD++KLDVVS GK+ +++KAI +GFF +AA+KDPQEGYRTL++ Q VYIHPSSALF RQP+WV+YHELV+TTKEYMREVT IDP+WLVE AP FFKV+DPTK+SK+K+Q+R+EPLY+RY EPN+WR+S+ Sbjct: 285 EPAIGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNPNRRRNL--VGETNEETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRISDPEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEPLYNRYEEPNAWRISR 1239 HSP 2 Score: 71.2478 bits (173), Expect = 5.268e-11 Identity = 33/69 (47.83%), Postives = 45/69 (65.22%), Query Frame = 1 Query: 37 KLDYLSLVSKVCTELESHTGTGDKVLAEFITDLGHSSESVEEFDSKLKENGAEMPDYFVRTLLTIIHAI 243 KL+YLSLVSKVCTEL++H G DK LAEF+ L + + + F + L +NGAE D + LL +I + Sbjct: 24 KLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFDTFKASLVKNGAEFTDSLISNLLRLIQTM 92
BLAST of Psat6g004240.3 vs. DB:Swiss
Match: DHX8_HUMAN (ATP-dependent RNA helicase DHX8 OS=Homo sapiens OX=9606 GN=DHX8 PE=1 SV=1) HSP 1 Score: 1325.84 bits (3430), Expect = 0.000e+0 Identity = 638/957 (66.67%), Postives = 796/957 (83.18%), Query Frame = 1 Query: 796 EPELYMVYKGRISRVMDTGCFVQLDDLRGK-EGLVHVSQMATR-KIVNAKEVVKRDQQVYVKVISVSGSKLSLSMRDVDQHTGKDLLPLKKTSEEEAFRTNPQDSKDGPVARTGLSGIRIVEEDDIGSTRRPLKRMSSPEIWEAKQLIASGVLSVSEYPTYDDEGDGVMYQXXXXXXXXXXXXXXXXPAFLQGQSRYSMDMSPVKIFKNPEGSLGRAAALQSALIKXXXXXXXXXXXTMLDSIPKDLNRPWEDPMPESGERHLAQELRGVGLSAYDMPEWKKDAYG-KTITFGQRSKLSIQEQRQSLPIYKLKKELIQAVLDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILVDENLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPELRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSVPEIQRINLGMTTLSMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRARFFQPEGDHLTLLAVYESWKNKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDKYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRYHEPNSWRLSK 3657 EP + +Y G+++ +M GCFVQL+ LR + EGLVH+S++ ++ N +VV + Q+V VKV+S +G+K SLSM+DVDQ TG+DL P ++ + TN + S P T LS + E +D R+ L R+S PE WE KQ+IA+ VLS E+P +D+E + ++ +E+LEIE+ ++EP FL+G ++ SMDMSP+KI KNP+GSL +AA +QSAL KERRE+++ Q+ +DSIP LN+ W DP+P++ R +A +RG+G+ D+PEWKK A+G ++G+++++SI EQR+SLPIYKLK++L+QAV DNQ+L+VIGETGSGKTTQ+TQYLAEAGYT+RGKIGCTQPRRVAAMSVAKRV+EEFGC LG+EVGY IRFEDCT P+TVIKYMTDGMLLRE L+D +L+QY++IMLDEAHERTIHTDVLFGLLK+ V++R +++LIVTSATLDA KFS YF+ IFTIPGRT+PVEILYTK+PE+DYLDASLITV+QIHLTEP GDIL+FLTGQEEID AC+ LYERMK LG +VPELIILPVYSALPSEMQ+RIFDPAPPG RKVV+ATNIAE SLTIDGI+YV+DPGF KQ VYN K G+D LV+TPISQA AKQRAGRAGRTGPGKCYRLYTE AYR+EM T+VPEIQR NL T LS+KAMGINDLLSFDFMD P + LI+AMEQLY+LGALD+EGLLT+LGR+MAEFPL+P L KML+ SV LGCS+E+LTI++M+ N+FYRP++KQA ADQK+A+F Q EGDHLTLLAVY SWKN FS PWC+ENF+Q+RSLRRAQD+RKQ+L IMD++KLDVVS GK+ +++KAI +GFF +AA+KDPQEGYRTL++ Q VYIHPSSALF RQP+WV+YHELV+TTKEYMREVT IDP+WLVE AP FFKV+DPTK+SK+K+Q+R+EPLY+RY EPN+WR+S+ Sbjct: 261 EPTIGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNPNRRRNL--VGETNEETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRISDPEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEPLYNRYEEPNAWRISR 1215 HSP 2 Score: 71.2478 bits (173), Expect = 5.192e-11 Identity = 33/69 (47.83%), Postives = 45/69 (65.22%), Query Frame = 1 Query: 37 KLDYLSLVSKVCTELESHTGTGDKVLAEFITDLGHSSESVEEFDSKLKENGAEMPDYFVRTLLTIIHAI 243 KL+YLSLVSKVCTEL++H G DK LAEF+ L + + + F + L +NGAE D + LL +I + Sbjct: 24 KLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFDTFKASLVKNGAEFTDSLISNLLRLIQTM 92
BLAST of Psat6g004240.3 vs. DB:Swiss
Match: DHX8_DROME (ATP-dependent RNA helicase DHX8 OS=Drosophila melanogaster OX=7227 GN=pea PE=1 SV=1) HSP 1 Score: 1288.48 bits (3333), Expect = 0.000e+0 Identity = 638/961 (66.39%), Postives = 776/961 (80.75%), Query Frame = 1 Query: 790 SGEPELYMVYKGRISRVMDTGCFVQLDDLRGK-EGLVHVSQM-ATRKIVNAKEVVKRDQQVYVKVISVSGSKLSLSMRDVDQHTGKDLLPLKKTSEE-EAFRT-NPQDSKDGPVART----GLSGIRIVEEDDIGSTRRPLKRMSSPEIWEAKQLIASGVLSVSEYPTYDDEGDGVMYQXXXXXXXXXXXXXXXXPAFLQGQSRYSMDMSPVKIFKNPEGSLGRAAALQSALIKXXXXXXXXXXXTMLDSIPKDLNRPWEDPMPESGERHLAQELRGVGLSAYDMPEWKKDAYG-KTITFGQRSKLSIQEQRQSLPIYKLKKELIQAVLDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILVDENLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPELRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSVPEIQRINLGMTTLSMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRARFFQPEGDHLTLLAVYESWKNKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDKYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRYHEPNSW 3645 + +PE +Y G+I+ ++ GCFVQL LR + EGLVH+SQ+ A ++ + EVV R+Q V VKV+S++G K+SLSM++VDQ +GKDL PL E+ E+ R NP DGP + + L G + E D +R+ + R+SSPE WE KQ+I+SGVL SE P +D+E G++ ++E E ++EIE+ ++EP FL G R D+SPV+I KNP+GSL +AA +QSAL KERRE + Q+ ++++P LN+ W DP+PE R LA +RG+ + ++PEWKK G K +FG+++ L++ EQRQSLPIYKL+ +LI+AV DNQ+L+VIGETGSGKTTQ+TQYL E G+T RGKIGCTQPRRVAAMSVAKRVAEE+GCRLG+EVGY IRFEDCT P+T+IKYMTDGMLLRE L++ L YSVIMLDEAHERTIHTDVLFGLLK V++RPEL+LIVTSATLDA KFS YFF IFTIPGRTFPVE+LYTK+PE+DYLDASLITV+QIHL EP GDILLFLTGQEEID AC+ LYERMK LG +VPELIILPVYSALPSEMQ+RIFDPAP G RKVV+ATNIAE SLTIDGIFYV+DPGF KQ VYN K G+DSLV+TPISQA+AKQRAGRAGRTGPGK YRLYTE AYR+EM PT VPEIQR NL T L +K MGINDLL FDFMD P ++L+ A+EQL+SL ALD+EGLLT+LGR+MAEFPL+P LSKML+ SV L CSDEILTI++M+ N+FYRP++KQA ADQK+A+F Q EGDHLTLLAVY SWKN FS WC+ENFVQ R+L+R+QDVRKQLL IMD++KLDVVSAGKN +I+KAI +GFF +AA+KDPQEGYRTLV++Q VYIHPSSALF RQP+WVIYHELV TTKEYMREVT IDPKWLVE AP FF+ +DPTK+SK K+ +R+EPLY++Y EPN+W Sbjct: 279 TDDPEAGKIYSGKIANIVPFGCFVQLFGLRKRWEGLVHISQLRAEGRVTDVTEVVTRNQTVKVKVMSITGQKVSLSMKEVDQDSGKDLNPLSHAPEDDESLRDRNP----DGPFSSSTSMLNLQGNGM--EGDEHESRKRVTRISSPERWEIKQMISSGVLDRSEMPDFDEET-GLLPKDEDDEADIEIEIVEEEPPFLSGHGRALHDLSPVRIVKNPDGSLAQAAMMQSALSKERREQKMLQREQEIEAMPTSLNKNWIDPLPEDESRSLAANMRGMAAAPPEVPEWKKHVIGGKKSSFGKKTDLTLVEQRQSLPIYKLRDDLIKAVTDNQILIVIGETGSGKTTQITQYLGECGFTARGKIGCTQPRRVAAMSVAKRVAEEYGCRLGQEVGYTIRFEDCTSPETIIKYMTDGMLLRECLMEAELKSYSVIMLDEAHERTIHTDVLFGLLKTAVQKRPELKLIVTSATLDAVKFSQYFFKAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPAGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQAAAKQRAGRAGRTGPGKTYRLYTERAYRDEMLPTPVPEIQRTNLATTVLQLKTMGINDLLHFDFMDAPPVESLVMALEQLHSLSALDDEGLLTRLGRRMAEFPLEPNLSKMLIMSVALQCSDEILTIVSMLSVQNVFYRPKDKQALADQKKAKFNQAEGDHLTLLAVYNSWKNNKFSNAWCYENFVQIRTLKRSQDVRKQLLGIMDRHKLDVVSAGKNSVRIQKAICSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTTIDPKWLVEFAPSFFRFSDPTKLSKFKKNQRLEPLYNKYEEPNAW 1232 HSP 2 Score: 75.8702 bits (185), Expect = 2.453e-12 Identity = 36/68 (52.94%), Postives = 48/68 (70.59%), Query Frame = 1 Query: 34 EKLDYLSLVSKVCTELESHTGTGDKVLAEFITDLGHSSESVEEFDSKLKENGAEMPDYFVRTLLTIIH 237 +KL+YLSLVSK+CTEL++H G DK LAEFI DL + + + + F L +NGAE PD V+ L II+ Sbjct: 5 QKLEYLSLVSKICTELDNHLGINDKDLAEFIIDLENKNRTYDTFRKALLDNGAEFPDSLVQNLQRIIN 72
BLAST of Psat6g004240.3 vs. DB:Swiss
Match: MOG5_CAEEL (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5 OS=Caenorhabditis elegans OX=6239 GN=mog-5 PE=1 SV=1) HSP 1 Score: 1177.93 bits (3046), Expect = 0.000e+0 Identity = 587/967 (60.70%), Postives = 744/967 (76.94%), Query Frame = 1 Query: 802 ELYMVYKGRISRVMDTGCFVQLDDLRGK-EGLVHVSQMATRKIVNAKEVVKRDQQVYVKVISVSGSKLSLSMRDVDQHTGKDLLPLKKTSEEEAFRTNPQDSKDGPVARTG------LSGIRIVEEDDIGSTRRPLKRMSSPEIWEAKQLIASGVLSVSEYPTYDDEGDGVM--YQXXXXXXXXXXXXXXXXPAFLQGQSRYSMDMSPVKIFKNPEGSLGRAAALQSALIKXXXXXXXXXXXTMLDSIPKDL--NRPWEDPMPESGERHLA---QELRGVGLSAYDMPEWKKDAY-GKTITFGQRSKLSIQEQRQSLPIYKLKKELIQAVLDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILVDENLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPELRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSVPEIQRINLGMTTLSMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRARFFQPEGDHLTLLAVYESWKNKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDKYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRYHEPNSWRLSK 3657 E+ +Y GR++ + G F+ L+ R K EGLVH+SQ+ ++ +V+KR + V VKV + K+SLSM++VDQ++G+DL P + +A P+ P A T SG+ IG + + R+S+PE WE +Q+ +GVL+ ++ P +D+E GV+ Y +E E++EIE+ +DEP FL+G + ++ PVK+ KNP+GSL +AA +Q AL KER+E + Q QR K N DPM SG + A E + +MPEW K G T+G+R+ LS+ EQR+SLPI+ LKK L++A++DNQ+LVV+GETGSGKTTQ+TQY EAG RGKIGCTQPRRVAAMSVAKRVAEE+GC+LG +VGY IRFEDCT DT+IKYMTDGMLLRE L+D +LS YS+IMLDEAHERTIHTDVLFGLLK ++RPEL+LI+TSATLD+ KFS YF IFTIPGRTFPVEILYT++PESDYL+A+ ITV+QIHLTEP GD+L+FLTGQEEID +C+ LYERMK +G +VPELIILPVY ALPSEMQ+RIFDPAP GKRKVV+ATNIAE SLTIDGIFYV+DPGF KQ +YNPK G+DSLV+TPISQA+AKQR+GRAGRTGPGKCYRLYTE A+R+EM PT VPEIQR NL T L +KAMGIN+L+ FDFMD P ++I+A+ L++L ALD +GLLTKLGR+MAEFPL+P LSK+L+ SVDLGCS+E+LTI+AM+ NIFYRP+EKQ ADQK+A+F QPEGDHLTLLAVY SWKN +FS PWCFENF+Q RS++RAQD+RKQLL IMD++KL +VS G++ ++++KAI +GFF +AA++DPQEGYRTL + Q VYIHPSSA FQ+QP+WV+YHELVMTTKEYMREVT IDPKWLVE AP FFK+ D TK+S KR ++I+PL+D+Y + N+WR+++ Sbjct: 232 EIGKIYDGRVNSIQSFGAFITLEGFRQKQEGLVHISQIRNERVQTVADVLKRGENVKVKVNKIENGKISLSMKEVDQNSGEDLNPRETDLNPDAIGVRPRT----PPASTSSWMNPEASGVGQGPSTSIGGGKARV-RISTPERWELRQMQGAGVLTATDMPDFDEEM-GVLRNYDDESDGEDIEIELVEDEPDFLRGYGKGGAEIEPVKVVKNPDGSLAQAALMQGALSKERKETKIQAQRERDMDTQKGFSSNARILDPM--SGNQSTAWSADESKDRNNKMKEMPEWLKHVTAGGKATYGRRTNLSMVEQRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEAGLGRRGKIGCTQPRRVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECLIDPDLSGYSLIMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYFLEAPIFTIPGRTFPVEILYTREPESDYLEAAHITVMQIHLTEPPGDVLVFLTGQEEIDTSCEVLYERMKSMGPDVPELIILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGRAGRTGPGKCYRLYTERAFRDEMLPTPVPEIQRTNLASTLLQLKAMGINNLIDFDFMDAPPLDSMITALNTLHTLSALDGDGLLTKLGRRMAEFPLEPSLSKLLIMSVDLGCSEEVLTIVAMLNVQNIFYRPKEKQDHADQKKAKFHQPEGDHLTLLAVYNSWKNHHFSQPWCFENFIQVRSMKRAQDIRKQLLGIMDRHKLLMVSCGRDVSRVQKAICSGFFRNAAKRDPQEGYRTLTDGQNVYIHPSSACFQQQPEWVVYHELVMTTKEYMREVTAIDPKWLVEFAPSFFKIGDSTKLSTFKRNQKIDPLFDKYADANAWRITR 1190
BLAST of Psat6g004240.3 vs. DB:Swiss
Match: PRP22_SCHPO (Pre-mRNA-splicing factor ATP-dependent RNA helicase prp22 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=prp22 PE=1 SV=1) HSP 1 Score: 1086.63 bits (2809), Expect = 0.000e+0 Identity = 543/976 (55.64%), Postives = 725/976 (74.28%), Query Frame = 1 Query: 799 PELYMVYKGRISRVMDTGCFVQLDDLRGK-EGLVHVSQMATR-KIVNAKEVVKRDQQVYVKVISV--SGSKLSLSMRDVDQHTGKDLLP------LKKTSEEEAFRTNPQDSKDGPVA--RTGLSGIRIVEEDDIGSTRRPLKRMSSPEIWEAKQLIASGVLSVSEYPTYDD--EGDGVMYQXXXXXXXXXXXXXXXXPAFLQGQSRYSMDMSPVKIFKNPEGSLGRAAALQSALI---KXXXXXXXXXXXTMLDSIPKDLNRPWEDPMPESGERHLAQELRGVGLS--AYDMPEWKKDAYGKTITFGQRSKLSIQEQRQSLPIYKLKKELIQAVLDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGK-IGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILVDENLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPELRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSVPEIQRINLGMTTLSMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRARFFQPEGDHLTLLAVYESWKNKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDKYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEG-YRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRR 3663 P LY +Y G +S + D G FV LD R + +GLVH+S + ++ + E V Q V+VKVI + S ++SLSM++V+Q TG+DL P KK S A + Q+S+ G V T S R KR++SPEIWE +QL ASG +S ++ P +D + +E++EIE+ ++EP FL GQ++ S+ +SP+K+ K P+GSL RAA +Q ++ + +E + ++ + +DL+ W+D M +R AQ++R + P W++ I++G+R+ LS++EQR+ LP++KL+K+ ++AV NQ+LV++GETGSGKTTQ+TQYLAE GYT+ K IGCTQPRRVAAMSVAKRVAEE GCR+GEEVGY IRFED T T IKYMTDGML RE LVD LS+YSVI+LDEAHERT+ TDVLFGLLK V +RP+L+LIVTSATLDAE+FS YF+ C IFTIPGR++PVEI+YTKQPE+DYLDA+L+TV+QIHL+E GDIL+FLTGQEEID +C+ LYER K LG ++PEL+ILPVYSALPSE+QSRIF+PAPPG RKVV+ATNIAE SLTIDGI+YV+DPGF KQ+ ++PK G+DSL++TPISQA A+QR+GRAGRTGPGKCYRLYTESAYRNEM P+ +PEIQR NL T L +KAMGINDLL+FDFMDPP Q +I+A++ LY+L ALD+EGLLT LGRKMA+FP++P LSK+L+ SV+LGCS+E+L+IIAM+ NI+ RPREKQ +AD++RA+F PE DHLTLL VY +WK S WC+E+++Q+R +RRA+DVRKQL+ +MD+Y+ VVS G+ I +A+ +G+F + A++D EG Y+T+VEN PVY+HPS LF + +WVIYHEL+ T+KEYM V+ ++PKWLVE+AP FFK A+ ++SK K+ ++ PLY+R+ +P+ WR+SK+R Sbjct: 204 PTLYGIYSGVVSGIKDFGAFVTLDGFRKRTDGLVHISNIQLNGRLDHPSEAVSYGQPVFVKVIRIDESAKRISLSMKEVNQVTGEDLNPDQVSRSTKKGSGANAIPLSAQNSEIGHVNPLETFTSNGR--------------KRLTSPEIWELQQLAASGAISATDIPELNDGFNTNNAAEINPEDDEDVEIELREEEPGFLAGQTKVSLKLSPIKVVKAPDGSLSRAA-MQGQILANDRREIRQKEAKLKSEQEMEKQDLSLSWQDTMSNPQDRKFAQDVRDSAARQLTSETPSWRQATRNANISYGKRTTLSMKEQREGLPVFKLRKQFLEAVSKNQILVLLGETGSGKTTQITQYLAEEGYTSDSKMIGCTQPRRVAAMSVAKRVAEEVGCRVGEEVGYTIRFEDKTSRMTQIKYMTDGMLQRECLVDPLLSKYSVIILDEAHERTVATDVLFGLLKGTVLKRPDLKLIVTSATLDAERFSSYFYKCPIFTIPGRSYPVEIMYTKQPEADYLDAALMTVMQIHLSEGPGDILVFLTGQEEIDTSCEILYERSKMLGDSIPELVILPVYSALPSEIQSRIFEPAPPGGRKVVIATNIAETSLTIDGIYYVVDPGFVKQSCFDPKLGMDSLIVTPISQAQARQRSGRAGRTGPGKCYRLYTESAYRNEMLPSPIPEIQRQNLSHTILMLKAMGINDLLNFDFMDPPPAQTMIAALQNLYALSALDDEGLLTPLGRKMADFPMEPQLSKVLITSVELGCSEEMLSIIAMLSVPNIWSRPREKQQEADRQRAQFANPESDHLTLLNVYTTWKMNRCSDNWCYEHYIQARGMRRAEDVRKQLIRLMDRYRHPVVSCGRKRELILRALCSGYFTNVAKRDSHEGCYKTIVENAPVYMHPSGVLFGKAAEWVIYHELIQTSKEYMHTVSTVNPKWLVEVAPTFFKFANANQVSKTKKNLKVLPLYNRFEKPDEWRISKQR 1164 HSP 2 Score: 62.7734 bits (151), Expect = 2.008e-8 Identity = 33/74 (44.59%), Postives = 47/74 (63.51%), Query Frame = 1 Query: 22 DGLKEKLDYLSLVSKVCTELESHTGTGDKVLAEFITDLGHSSESVEEFDSKLKENGAEMPDYFVRTLLTIIHAI 243 D LKE L+YLSLVSKV +E+ +HTG D LAEFI +L S++ +EF + + G E D F++ + +I I Sbjct: 2 DDLKE-LEYLSLVSKVASEIRNHTGIDDNTLAEFIINLHDQSKNYDEFKNNVLSCGGEFTDSFLQNISRLIKEI 74
BLAST of Psat6g004240.3 vs. DB:Swiss
Match: PRP22_YEAST (Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PRP22 PE=1 SV=1) HSP 1 Score: 949.503 bits (2453), Expect = 0.000e+0 Identity = 489/991 (49.34%), Postives = 678/991 (68.42%), Query Frame = 1 Query: 799 PELYMVYKGRISRVMDTGCFVQLDDLRGK--EGLVHVSQMATRKIVNAKEVVKRDQQVYVKVISV-SGSKLSLSMRDVDQHTGKDLLPLKKTSEEEAFRTNPQDSKDGPVARTGLSGIRIVEEDDIGSTRRPLKRMSSPEIWEAKQLIASGVLSVSEYPTYDDE------------GDGVMY--------------QXXXXXXXXXXXXXXXXPAFLQ-----GQSRYSMDMSPVKIFKNPEGSLGRAAALQSALIKXXXXXXXXXXXTMLDSIPKDLNRPWEDPMPESGE-RHLAQELRGVGLSAYDMPEWKKDAYGKTITFGQRSKLSIQEQRQSLPIYKLKKELIQAVLDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILVDENLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPELRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSVPEIQRINLGMTTLSMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRARFFQPEGDHLTLLAVYESWKNKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDKYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRY-HEPNSWRLSKRR 3663 P L+ VY+G++ + GCFVQ+ R K +GLVH+S+M+ ++ ++ +VV++ Q ++V+VI + + K+SLSM+++DQH+G ++ S E+ R+N D +R + I+ RR L +SPE WE +QLIASG S+ +YP DE DG + Q + +E DD P FL+ G +Y M KI K P G + R+A S I++ RE + +++R + I K + ++DP + R+ Q L+ + + EW+K+ ++I++G+R+ L I QRQ+LP+Y ++ ELIQAV DNQ LV++GETGSGKTTQ+TQYL E G++ G IGCTQPRRVAA+SVAKRVAEE GC++G +VGY IRFED TGPDT IKYMTDGML RE L+D +S+YSVIMLDEAHERT+ TDVLF LLK+ +RPEL++IVTSATL++ KFS YF NC I IPG+TFPVE+LY++ P+ DY++A+L V+ IH+ E GDIL+FLTGQEEID C+ LY+R+K LG ++ EL+ILPVYSALPSE+QS+IF+P P G RKVV ATNIAE S+TIDGI+YV+DPGFAK N+YN + G++ L+++PISQA A QR GRAGRTGPGKCYRLYTESA+ NEM +VPEIQR NL T L +KAMGINDLL FDFMDPP +++A+ +LY L +LD+EG LT LG++M+ FP+DP LS+ LL+SVD CSDEI+TII+M+ N+FYRP+++Q +AD K+A+F P GDHLTLL VY W+ N+S +C NF+ R L+RA+DV+ Q+ I K L ++S + IRK +GFF +AA++D Q GY+T+ V IHPSS+L+ ++ ++V+YH +V+T++EYM +VT I+P+WL+E+AP F+K D S++K +I PL++++ + NSWRLS R Sbjct: 175 PVLHKVYEGKVRNITTFGCFVQIFGTRMKNCDGLVHISEMSDQRTLDPHDVVRQGQHIFVEVIKIQNNGKISLSMKNIDQHSG-EIRKRNTESVEDRGRSN-----DAHTSRNMKNKIK----------RRAL---TSPERWEIRQLIASGAASIDDYPELKDEIPINTSYLTAKRDDGSIVNGNTEKVDSKLEEQQRDETDEIDVELNTDDGPKFLKDQQVKGAKKYEMP----KITKVPRGFMNRSAINGSNAIRDHREEKLRKKREIEQQIRK--QQSFDDPTKNKKDSRNEIQMLKNQLI----VTEWEKNRMNESISYGKRTSLPISAQRQTLPVYAMRSELIQAVRDNQFLVIVGETGSGKTTQITQYLDEEGFSNYGMIGCTQPRRVAAVSVAKRVAEEVGCKVGHDVGYTIRFEDVTGPDTRIKYMTDGMLQREALLDPEMSKYSVIMLDEAHERTVATDVLFALLKKAAIKRPELKVIVTSATLNSAKFSEYFLNCPIINIPGKTFPVEVLYSQTPQMDYIEAALDCVIDIHINEGPGDILVFLTGQEEIDSCCEILYDRVKTLGDSIGELLILPVYSALPSEIQSKIFEPTPKGSRKVVFATNIAETSITIDGIYYVVDPGFAKINIYNARAGIEQLIVSPISQAQANQRKGRAGRTGPGKCYRLYTESAFYNEMLENTVPEIQRQNLSHTILMLKAMGINDLLKFDFMDPPPKNLMLNALTELYHLQSLDDEGKLTNLGKEMSLFPMDPTLSRSLLSSVDNQCSDEIVTIISMLSVQNVFYRPKDRQLEADSKKAKFHHPYGDHLTLLNVYTRWQQANYSEQYCKTNFLHFRHLKRARDVKSQISMIFKKIGLKLISCHSDPDLIRKTFVSGFFMNAAKRDSQVGYKTINGGTEVGIHPSSSLYGKEYEYVMYHSIVLTSREYMSQVTSIEPQWLLEVAPHFYKAGDAESQSRKK--AKIIPLHNKFAKDQNSWRLSSIR 1134
BLAST of Psat6g004240.3 vs. DB:Swiss
Match: DHX16_DICDI (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 OS=Dictyostelium discoideum OX=44689 GN=dhx16 PE=3 SV=1) HSP 1 Score: 818.92 bits (2114), Expect = 0.000e+0 Identity = 376/634 (59.31%), Postives = 493/634 (77.76%), Query Frame = 1 Query: 1669 RSKLSIQEQRQSLPIYKLKKELIQAVLDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILVDENLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPELRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSVPEIQRINLGMTTLSMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGN-IFYRPREKQAQADQKRARFFQPEGDHLTLLAVYESWKNKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDKYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVAD 3567 ++K++IQE R+SLP+Y +++LI AV + QVL+++GETGSGKTTQ+ QYL EAG++ GKIGCTQPRRVAAMSVA RVAEE GC+LG EVGY+IRFEDCT TV++YMTDGML+RE L +L+ YSV+++DEAHERT+HTD+LFGLLK + + RP+L+L+++SAT+DAE+FS YF F IPGR + V YT+ PE+DYLDA+++TVLQIH+TEP GDIL+FLTGQEE+D A + L R +GLG + ELII +YS LP+++Q++IF+P PP RKVV+ATNIAE SLTIDGI YVIDPGF KQ ++NP+ G++SLVITP+S+ASA QR GRAGR PGKC+RL+T A+ NE+ ++PEIQR NLG L +K+MGINDL++FDFMDPP Q LI+A+EQLY+LGAL++ G LTKLGRKMAEFP+DP LSKM++AS CS+EILTI AM+ GN IFYRP++K AD R FF P+GDHLTL+ V+ W+ ++ WCFENF+Q RS++RAQDVR QL ++++ ++ +VS + IRK I +GFF+++A+ + +RT NQ V IHPSS LFQ P WV+YHELV+TTKE+MR++ I WL E+AP +K D Sbjct: 455 QAKMTIQEVRKSLPVYPYREQLIDAVREYQVLIIVGETGSGKTTQIPQYLHEAGFSKTGKIGCTQPRRVAAMSVAARVAEEVGCKLGNEVGYSIRFEDCTSQKTVLQYMTDGMLVREFLTAPDLASYSVLIIDEAHERTLHTDILFGLLKDITRFRPDLKLLISSATMDAERFSDYFDGAPTFNIPGRKYEVTTHYTQAPEADYLDAAVVTVLQIHITEPLGDILVFLTGQEEVDQAAEMLQTRTRGLGTKIKELIITRIYSTLPTDLQAKIFEPTPPNARKVVLATNIAETSLTIDGIIYVIDPGFCKQKMFNPRTGMESLVITPVSRASANQRKGRAGRVAPGKCFRLFTAWAFDNELEENTIPEIQRTNLGNVVLLLKSMGINDLMNFDFMDPPPAQTLIAALEQLYALGALNDRGQLTKLGRKMAEFPVDPQLSKMIIASEKYKCSEEILTICAMLSVGNTIFYRPKDKAFAADAARKLFFHPQGDHLTLMNVFNQWRESGYAVQWCFENFIQHRSMKRAQDVRDQLELLLERVEIPLVSNVDDTDSIRKCIASGFFYNSAKLEKSGLFRTTKHNQSVQIHPSSCLFQSPPKWVVYHELVLTTKEFMRQIVEIQSSWLHEIAPHIYKEKD 1088
BLAST of Psat6g004240.3 vs. DB:Swiss
Match: ESP3_ARATH (Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 OS=Arabidopsis thaliana OX=3702 GN=ESP3 PE=1 SV=1) HSP 1 Score: 812.372 bits (2097), Expect = 0.000e+0 Identity = 372/655 (56.79%), Postives = 502/655 (76.64%), Query Frame = 1 Query: 1636 DAYGKTITFGQRSKLS-IQEQRQSLPIYKLKKELIQAVLDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILVDENLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPELRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSVPEIQRINLGMTTLSMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQT-GNIFYRPREKQAQADQKRARFFQPE-GDHLTLLAVYESWKNKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDKYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRK 3591 DA K+ +++ L +QE R+SLPIY + +L++AV ++QVLV++G+TGSGKTTQ+ QYL EAGYT RGK+GCTQPRRVAAMSVA RVA+E G +LG EVGY+IRFEDCT TV+KYMTDGMLLRE+L + +L+ YSV+++DEAHERT+ TD+LFGL+K + + RP+L+L+++SAT+DAEKFS YF IF+ PGR +PVEI YT PE+DY+DA+++T+L IH+ EP GDIL+F TGQEEI+ A + L R++GLG + ELII P+Y+ LPSE+Q++IF+P P G RKVV+ATNIAE SLTIDGI YV+DPGF+K YNP+ G++SL+ITPIS+ASA QRAGRAGRT PGKCYRLYT Y N++ +VPE+QR NL L++K++GI+DL++FDFMDPP +AL+ ++E L++LGAL++ G LTK GR+MAEFPLDP LSKM++ S CSDEI++I AM+ G+IFYRP++KQ AD R F GDH+ LL VY SWK NFS WC+EN++Q RS++RA+D+R QL ++++ ++D+ S +RK+I AGFF H A+ YRT+ Q V+IHP+S L Q P WV+YHELV+T+KEYMR+VT + P+WL+ELAP ++++ D + +K Sbjct: 380 DAKQKSQDLAEKTALEELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLRELLGEPDLASYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLISSATMDAEKFSDYFDTAPIFSFPGRRYPVEINYTSAPEADYMDAAIVTILTIHVREPLGDILVFFTGQEEIETAEEILKHRIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASATQRAGRAGRTSPGKCYRLYTAFNYNNDLEENTVPEVQRTNLASVVLALKSLGIHDLINFDFMDPPPAEALVKSLELLFALGALNKLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYSSWKETNFSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDISSNLNELDSVRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIHPNSGLSQVLPRWVVYHELVLTSKEYMRQVTELKPEWLIELAPHYYQLKDVEDAASKK 1034 The following BLAST results are available for this feature:
BLAST of Psat6g004240.3 vs. DB:Swiss
Analysis Date: 2019-09-12 (BLAST: P. sativum Cameor genome v1a vs. Swissprot) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan: P. sativum Cameor genome v1a
Date Performed: 2019-09-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Psat6g004240.3_Ps_Cameor_v1a ID=Psat6g004240.3_Ps_Cameor_v1a; Name=Psat6g004240.3; organism=Pisum sativum; type=mRNA; length=6491bpback to top protein sequence of Psat6g004240.3_Ps_Cameor_v1a >Psat6g004240.3_Ps_Cameor_v1a ID=Psat6g004240.3_Ps_Cameor_v1a; Name=Psat6g004240.3_Ps_Cameor_v1a; organism=Pisum sativum; type=polypeptide; length=1223bpback to top mRNA from alignment at chr6LG2:2814402..2820892+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Psat6g004240.3_Ps_Cameor_v1a ID=Psat6g004240.3_Ps_Cameor_v1a; Name=Psat6g004240.3; organism=Pisum sativum; type=mRNA; length=6491bp; location=Sequence derived from: chr6LG2:2814402..2820892+ (Pisum sativumback to top Coding sequence (CDS) from alignment at chr6LG2:2814402..2820892+ >Psat6g004240.3_Ps_Cameor_v1a ID=Psat6g004240.3_Ps_Cameor_v1a; Name=Psat6g004240.3; organism=Pisum sativum; type=CDS; length=7338bp; location=Sequence derived from: chr6LG2:2814402..2820892+ (Pisum sativumback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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