Psat6g005240.1

Transcript Overview


Name	Psat6g005240.1
Unique Name	Psat6g005240.1_Ps_Cameor_v1a
Type	mRNA
Organism	Pisum sativum (pea)
Sequence length	4113

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
chr6LG2	supercontig	chr6LG2:3718273..3722385 -	Pisum sativum Cameor genome v1a	n/a
chr6LG2	supercontig	chr6LG2:3718273..3722385 -	Pisum sativum Cameor genome v1a	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan: P. sativum Cameor genome v1a	2019-09-12
BLAST: P. sativum Cameor genome v1a vs. Swissprot	2019-09-12
Pisum sativum Cameor genome v1a	2019-09-06

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
crpsL366	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
crpsL373	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
crpsL479	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
caipsL401	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
capsL340	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
capsL428	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
psvuR622	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
psvuR651	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
pspvR580	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
pspvR700	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
ccpsL806	Cajanus cajan Asha genome v1.0	Cajanus cajan
anpsL0097	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anpsL0304	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anpsL0351	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anpsL0649	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
pszwsR580	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
pszwsR594	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
pstifR574	Vicia faba cv. Tiffany genome v1.0	Vicia faba
pstifR649	Vicia faba cv. Tiffany genome v1.0	Vicia faba
psvfhR554	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
psvfhR634	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
psvrvR508	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
psvrvR512	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
psvuaR592	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
psvuaR599	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
psvssR709	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
psvssR715	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
canpsL343	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
canpsL442	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
avjpsL597	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
avjpsL764	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
carpsL320		Cicer arietinum
ccapsL546	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
ccapsL663	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
psvumR664	Vigna umbellata FF25 genome v1.0	Vigna umbellata
psvumR692	Vigna umbellata FF25 genome v1.0	Vigna umbellata
psvvaR756	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
psvasR583	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
psvasR599	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
psvstR592	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
psvstR619	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
pspvfR606	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
psvunR596	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
psvunR623	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
pspvfR737	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris

Orthologs


Gene/Transcript	Assembly	Species
jg35126.t1	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
Vfaba.Tiffany.R1.3g191400.1	Vicia faba cv. Tiffany genome v1.0	Vicia faba
Ca_08667.1	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
Ca_10763	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
Cr_07763.1	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
Vfaba.Hedin2.R1.3g234760.1	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
rna-XM_004499158.3	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
XM_058869362.1	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa

Gene/transcripts from the same species that appear to represent the same gene


Gene/Transcript	Assembly	Species
Psat06G0014100-T1	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
Psat6g005240	Psat6g005240_Ps_Cameor_v1a	Pisum sativum	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
Psat6g005240.1	Psat6g005240.1_Ps_Cameor_v1a-protein	Pisum sativum	polypeptide
Psat6g005240.1_Ps_Cameor_v1a	Psat6g005240.1_Ps_Cameor_v1a	Pisum sativum	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Psat6g005240.1.exon1	Psat6g005240.1.exon1_Ps_Cameor_v1a	Pisum sativum	exon
Psat6g005240.1.exon2	Psat6g005240.1.exon2_Ps_Cameor_v1a	Pisum sativum	exon
Psat6g005240.1.exon3	Psat6g005240.1.exon3_Ps_Cameor_v1a	Pisum sativum	exon
Psat6g005240.1.exon4	Psat6g005240.1.exon4_Ps_Cameor_v1a	Pisum sativum	exon
Psat6g005240.1.exon5	Psat6g005240.1.exon5_Ps_Cameor_v1a	Pisum sativum	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Psat6g005240.1.cds1	Psat6g005240.1.cds1_Ps_Cameor_v1a	Pisum sativum	CDS
Psat6g005240.1.cds2	Psat6g005240.1.cds2_Ps_Cameor_v1a	Pisum sativum	CDS
Psat6g005240.1.cds3	Psat6g005240.1.cds3_Ps_Cameor_v1a	Pisum sativum	CDS
Psat6g005240.1.cds4	Psat6g005240.1.cds4_Ps_Cameor_v1a	Pisum sativum	CDS
Psat6g005240.1.cds5	Psat6g005240.1.cds5_Ps_Cameor_v1a	Pisum sativum	CDS

Homology

[Close]

BLAST of Psat6g005240.1 vs. DB:Swiss
Match: MED11_ARATH (Mediator of RNA polymerase II transcription subunit 11 OS=Arabidopsis thaliana OX=3702 GN=MED11 PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.185e-40
Identity = 63/84 (75.00%), Postives = 70/84 (83.33%), Query Frame = 1

Query:    1 MDSQGQTTSLQRLQNVEKRIVKVLELAGGVMDELASPVGPRKDLVQNHCLEFMQLIKDIQVALRDEIKSACEYRPFEKWKYRGR 252
            MD Q Q TSLQRLQNVE R+VKVLELAGGVM+ELASP GP+K+ V +HC EFMQ +KDIQV LR+EIKSACEYRPFEK  Y  R
Sbjct:    1 MDPQTQNTSLQRLQNVENRVVKVLELAGGVMEELASPSGPKKEFVNSHCREFMQSMKDIQVTLREEIKSACEYRPFEKCDYNAR 84

The following BLAST results are available for this feature:

BLAST of Psat6g005240.1 vs. DB:Swiss

BLAST of Psat6g005240.1 vs. DB:Swiss
Analysis Date: 2019-09-12 (BLAST: P. sativum Cameor genome v1a vs. Swissprot)
Total hits: 1

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
MED11_ARATH	1.185e-40	75.00	Mediator of RNA polymerase II transcription subuni...	[more]

InterPro

Analysis Name: InterProScan: P. sativum Cameor genome v1a
Date Performed: 2019-09-12

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019404	Mediator complex, subunit Med11	PFAM	PF10280	Med11	coord: 9..96 e-value: 2.4E-12 score: 47.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 169..190

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr6LG2:3718273..3722385-
coding sequence from alignment at chr6LG2:3718273..3722385-

mRNA sequence

>Psat6g005240.1_Ps_Cameor_v1a ID=Psat6g005240.1_Ps_Cameor_v1a; Name=Psat6g005240.1; organism=Pisum sativum; type=mRNA; length=4113bp
ATGGATTCACAAGGCCAAACAACTTCTTTGCAGCGACTACAGAATGTCGA
AAAGGTATTAATCTTTTCACTCATGCTTGATTTTTTGTAGAGAATTATGA
AGAGAATTGTTTGATTTTATGTTGTGTTTAGAGAATTGTCAAGGTTTTGG
AGCTTGCAGGAGGAGTCATGGATGAGCTTGCAAGTCCAGTTGGTCCTAGA
AAAGATCTTGTTCAAAATCACTGCCTCGAGTTCATGCAATTAATCAAGGT
ATTACTTATTCTCTCTCAATTATTATAACTATAGATTCGCGTGCGTCTTC
ATTTCAATAATTAACATTAGCTTCATTTAAGGTTGAGTACCTTGCATTGT
GTCACATTAATAGTTTTTATCAAGTTTATTGCACTATGTTAGAAAAGAAC
TACTGCAAGCCATATTCATCCATTGAAAGGAGACTAACATAGTTAGTTAG
AGGTTGTTAAACTTGTTTTCAATTACACTAATCTTGTTCTCACATCATAT
TGTGATTTGCACCTGTTTTCCTCTGAGCTGAAATTGAACTGTGAATCTAT
TTTGTAATTGGCTTTTTTTTTATTGAGGGATGTAGTTTGGAGGATAAAGT
GTCAAGTTATAATATATGGATCAAATATGCTATGAGACTTTGATGACTTT
ATAGTTTGATAATACTGTTGTCAAATAGTGGTGATAGCAGTGCTATGACA
CAGAGGGTTTTGATGAATCCGCTATTAAAACCATGACGCTATCCTTGTTT
TGCTATTATAGCAACAGCGGCCGCTATTCCAGTTTCTGCTAACAGATGTA
GCGGCATTAACGGAAAAAAATTGGGTTTTAAAAATAATGAAACTGAAGAG
TTTGCATCTATACCAACACAAAATCTATTTTTAAAATATGTAAAGCTATG
CTTGGCCTCCATTCCCTTTTTCTTTGTATGCAAATGCAACATGCCTTCTT
TATTTATCATTGACTTCATTCAGCTGCAATGCGGCGTCCACAATTTGCCC
ATGATGCTATTTTCTATTACAAAGAGCTGGTTTTGACATTACACTTTCCG
CAATCTGCTATTAATAACATTATATTCAACAATGTCTTTTTATCACAATT
ATATCCATTGATTTTCAATTACAATTAACGGTTATATCTTCACTTTATTC
TCTTTATAGGTATCAAATCCGAATAAACTTGTGATATAACATACTTAGAT
ATCTTTTATCATCGAACCATTAGCACTTTGATAACCGTTTATTAAAAAAA
TTGTCTCGTTTCCTCATGTTGTGTGTTTTCATGCTTTGTTTTCACAGCTA
TGATAAAACACATCCTTTGTAATTTTGGTCTTTGAATCCTAAGAAAACTA
ATGCTCATTATGTTCAAAATGTTCATATTCATTATTAAAATCATGACTGA
ATTACCCAAGACAGATTGAATGTGGCAGAGTCAGATTGAGATGCCCTTGA
GTGGATTGTATTAGAATAAATACCTTTAATAGAATTAGTTGTGTTTGAAA
ATGCTTACTATATTTCACAATAATGGGTTCTGTCCTGTTAGTTATTGGAG
TATATAAGTGTGTGTATGGTTTTCTGATGGCATGATGTCACTTTCTCCCT
AATTGTTGGCAAGTTTAGTTATTCAGAATTAGTAGTGAAAATGATACTGT
AATTTTGTAAGGTTCTTTAACCTTTATTTTCTGTTTAAACTTTTTAGGAC
ATCCAAGTAGCGTTGCGTGATGAAATCAAAAGTGCTTGTGAATACCGTCC
ATTTGAAAAATGTGATTATGGTCCAAGAATAGCCAATGAGATATGTTTCA
AGAAGGTGGAATATGTCATGTCTCAGTTGGATGCAATTAAAAAAACTATA
GATGGGTATACTGCAGAACCCTGACAATCTTTAGTTCATCCTATAGAAGC
TGCATCATTTAGAGGGCAGTGCTGCAAGTGACTCATTTATGTATTCATTT
AGAGGGCTATTTGGACAATATGCATGTATTGTCTGTCTGTCTACCTTGTA
CACTAAACATGTAAATGCCTGATTGTGAAGTAGAGGATTTAATATTCATA
ATTAGTTGCTGTTGAAGCCATTTACTGTACTTACTAGCAACACTTTTTTG
TTTTTGGAATTGTGTAAAATTGATTTTGAAGTTTAGAATGAGGGGGAATT
TTTTTTTATCAGTAGACGAAATGGTAATATTAACTAAAATTTTACGTATA
TGACCGTAAGTATCATCTTTGAACCTTAGTGATGGCTTCCAACCTATCAA
TATAGGTTTCTGTCAAGCTAAGAGGGATTTTGTTTCTCACAATATGAATC
AAGATCATGATAACACACAAGCATAACAGGACAAACAAATAAGTACTGAT
ATTTGTCTTGAAAATAGAAGTTAAATCATTTTGTTGATATAATAATAATT
ACATTATTTTTCCATACCAAATTACCACCTTTAGTTTCTTAAATTAGGCA
ACATAATCCGGATAATCCGGATTTGCGGGTACCAAATTACCAACCAACTT
AGTATTGTTATGTTCATTTCATTATTTACTTTATTATATATTAAATATTT
ATTATATATTAAATATATATGGTCTAGTATAATTTAGTTTTATTATTGAG
TATATTAAAAATGTGTTTAATATTTTGATATTTTAATTTTTATTTATCGT
TAAAAATATTAGAAATGTATGTATGAAATTGAAAAAAAATAGGATATGCA
TTGATATTGATAGTATAAAATCATTTTATACTAACAATCAATTACCATCG
TATATCTCGTCAAATCAGATCGTAATTTTTAAGTTAACGGTATGATATGA
GTATGACGAGTAATGAATTTCTATTAAATGATAGTATAAAATTATTTTAT
ACTTCAATGCATAACCATTAAACTCTGGATTTTTTTTAACTTCTAGTCCT
AATATTTTAAAATCCAACTACTTGTTTACTCAACTTTATTTTTTTAAAGA
TTTTGTTAATCCCCCTCTCCAATTTTGTACATATGACATAAGATAACAAA
TTATTTTTAAGGACGTGGTAATTATGATTAGGGTAATTTATTAATTAATA
TTTTTATAAAATAAATTAATAATTTTAATTAAATTTTATTAGAAGAATAT
TGATAAGTGTTACGGGAGTTCACAAGAATAACAAGAATTTATACGTGTCA
TATTTAAAATACAAATTATGAAATGCCATTTTGAGTTAGTGTAAAGTATA
TAAATAATGAATGAGAGAAGAGTGAAATCAGAGCATTTAACTCGACATAT
CCTTTTGAATCTTGAACCCCATTTTGTATGAATAAACAATATTATCTATG
TAAAAAAATTTCACTCATTTTTAAAATTCCCAATTTTCACGTGTGAATTT
GAAGTCTCGGGATAATATCGGAAAATCCGTATCTTCTACTAAAAATTTCA
AAATCAATAAATTTTTTATCATAAATTACTAAATTTGCGTGATTTTGTAT
TGAAAATTTCAAAATTTTCAGTAATAATGAAAATATTTTAACTAGAATAT
TTAAAATTTATGGTACAAAATCACCTGAGAATTCTCGAAAATTTCAAATT
TTCTGGTAGTTATAACAACTTTGTTTTTTTATCTGAAATTTCAGAATTTC
AGGTAGTTATTAATTTTTCTTCCCGACTTTTGCAGGGAAATACAGAGGCA
GAGGCAACACAATTACAGGCAAAGCGATAAATAAAGCGACAAACCAGGAT
ATGACTGCTAAGATCGAGTCTTCCCAGATACAGGTTGGATGAGTGGTTCC
AACCGGTTCACATTGGAAACAGTTGGCTGAGCAGGGGTAGTTCTGCGCAC
CCCGTAGCACCCGACGCCAATCGTTAGAACAATTGAGTAACCCATAGATG
ATGCTAAAGTTGATCATGCTCAGGATGTTCATGACCCAGCGTTCAAGACA
GACATAACACATATTGCTGATAAGATGGTTGTTGTTAAGGCGGTTGTTGA
TGAGGTGGTCCAGCCAGATACCGATGTTGCAAATGAGATGGTCCATCCAG
ATGTTGTTGTTGATCCAATCCCATATACTACTGTTGACACAGAGCTCGCG
GCTCCTTCGACCGAGTCGTCTGTGCACACTGATGGAGGATTTTCAGGAGG
ACCCATTGAATGA

protein sequence of Psat6g005240.1_Ps_Cameor_v1a

>Psat6g005240.1_Ps_Cameor_v1a ID=Psat6g005240.1_Ps_Cameor_v1a; Name=Psat6g005240.1_Ps_Cameor_v1a; organism=Pisum sativum; type=polypeptide; length=191bp
MDSQGQTTSLQRLQNVEKRIVKVLELAGGVMDELASPVGPRKDLVQNHCL
EFMQLIKDIQVALRDEIKSACEYRPFEKWKYRGRGNTITGKAINKATNQD
MTAKIESSQIQDVHDPAFKTDITHIADKMVVVKAVVDEVVQPDTDVANEM
VHPDVVVDPIPYTTVDTELAAPSTESSVHTDGGFSGGPIE*

mRNA from alignment at chr6LG2:3718273..3722385-

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>Psat6g005240.1_Ps_Cameor_v1a ID=Psat6g005240.1_Ps_Cameor_v1a; Name=Psat6g005240.1; organism=Pisum sativum; type=mRNA; length=4113bp; location=Sequence derived from: chr6LG2:3718273..3722385- (Pisum sativum
ATGGATTCACAAGGCCAAACAACTTCTTTGCAGCGACTACAGAATGTCGA
AAAGGTATTAATCTTTTCACTCATGCTTGATTTTTTGTAGAGAATTATGA
AGAGAATTGTTTGATTTTATGTTGTGTTTAGAGAATTGTCAAGGTTTTGG
AGCTTGCAGGAGGAGTCATGGATGAGCTTGCAAGTCCAGTTGGTCCTAGA
AAAGATCTTGTTCAAAATCACTGCCTCGAGTTCATGCAATTAATCAAGGT
ATTACTTATTCTCTCTCAATTATTATAACTATAGATTCGCGTGCGTCTTC
ATTTCAATAATTAACATTAGCTTCATTTAAGGTTGAGTACCTTGCATTGT
GTCACATTAATAGTTTTTATCAAGTTTATTGCACTATGTTAGAAAAGAAC
TACTGCAAGCCATATTCATCCATTGAAAGGAGACTAACATAGTTAGTTAG
AGGTTGTTAAACTTGTTTTCAATTACACTAATCTTGTTCTCACATCATAT
TGTGATTTGCACCTGTTTTCCTCTGAGCTGAAATTGAACTGTGAATCTAT
TTTGTAATTGGCTTTTTTTTTATTGAGGGATGTAGTTTGGAGGATAAAGT
GTCAAGTTATAATATATGGATCAAATATGCTATGAGACTTTGATGACTTT
ATAGTTTGATAATACTGTTGTCAAATAGTGGTGATAGCAGTGCTATGACA
CAGAGGGTTTTGATGAATCCGCTATTAAAACCATGACGCTATCCTTGTTT
TGCTATTATAGCAACAGCGGCCGCTATTCCAGTTTCTGCTAACAGATGTA
GCGGCATTAACGGAAAAAAATTGGGTTTTAAAAATAATGAAACTGAAGAG
TTTGCATCTATACCAACACAAAATCTATTTTTAAAATATGTAAAGCTATG
CTTGGCCTCCATTCCCTTTTTCTTTGTATGCAAATGCAACATGCCTTCTT
TATTTATCATTGACTTCATTCAGCTGCAATGCGGCGTCCACAATTTGCCC
ATGATGCTATTTTCTATTACAAAGAGCTGGTTTTGACATTACACTTTCCG
CAATCTGCTATTAATAACATTATATTCAACAATGTCTTTTTATCACAATT
ATATCCATTGATTTTCAATTACAATTAACGGTTATATCTTCACTTTATTC
TCTTTATAGGTATCAAATCCGAATAAACTTGTGATATAACATACTTAGAT
ATCTTTTATCATCGAACCATTAGCACTTTGATAACCGTTTATTAAAAAAA
TTGTCTCGTTTCCTCATGTTGTGTGTTTTCATGCTTTGTTTTCACAGCTA
TGATAAAACACATCCTTTGTAATTTTGGTCTTTGAATCCTAAGAAAACTA
ATGCTCATTATGTTCAAAATGTTCATATTCATTATTAAAATCATGACTGA
ATTACCCAAGACAGATTGAATGTGGCAGAGTCAGATTGAGATGCCCTTGA
GTGGATTGTATTAGAATAAATACCTTTAATAGAATTAGTTGTGTTTGAAA
ATGCTTACTATATTTCACAATAATGGGTTCTGTCCTGTTAGTTATTGGAG
TATATAAGTGTGTGTATGGTTTTCTGATGGCATGATGTCACTTTCTCCCT
AATTGTTGGCAAGTTTAGTTATTCAGAATTAGTAGTGAAAATGATACTGT
AATTTTGTAAGGTTCTTTAACCTTTATTTTCTGTTTAAACTTTTTAGGAC
ATCCAAGTAGCGTTGCGTGATGAAATCAAAAGTGCTTGTGAATACCGTCC
ATTTGAAAAATGTGATTATGGTCCAAGAATAGCCAATGAGATATGTTTCA
AGAAGGTGGAATATGTCATGTCTCAGTTGGATGCAATTAAAAAAACTATA
GATGGGTATACTGCAGAACCCTGACAATCTTTAGTTCATCCTATAGAAGC
TGCATCATTTAGAGGGCAGTGCTGCAAGTGACTCATTTATGTATTCATTT
AGAGGGCTATTTGGACAATATGCATGTATTGTCTGTCTGTCTACCTTGTA
CACTAAACATGTAAATGCCTGATTGTGAAGTAGAGGATTTAATATTCATA
ATTAGTTGCTGTTGAAGCCATTTACTGTACTTACTAGCAACACTTTTTTG
TTTTTGGAATTGTGTAAAATTGATTTTGAAGTTTAGAATGAGGGGGAATT
TTTTTTTATCAGTAGACGAAATGGTAATATTAACTAAAATTTTACGTATA
TGACCGTAAGTATCATCTTTGAACCTTAGTGATGGCTTCCAACCTATCAA
TATAGGTTTCTGTCAAGCTAAGAGGGATTTTGTTTCTCACAATATGAATC
AAGATCATGATAACACACAAGCATAACAGGACAAACAAATAAGTACTGAT
ATTTGTCTTGAAAATAGAAGTTAAATCATTTTGTTGATATAATAATAATT
ACATTATTTTTCCATACCAAATTACCACCTTTAGTTTCTTAAATTAGGCA
ACATAATCCGGATAATCCGGATTTGCGGGTACCAAATTACCAACCAACTT
AGTATTGTTATGTTCATTTCATTATTTACTTTATTATATATTAAATATTT
ATTATATATTAAATATATATGGTCTAGTATAATTTAGTTTTATTATTGAG
TATATTAAAAATGTGTTTAATATTTTGATATTTTAATTTTTATTTATCGT
TAAAAATATTAGAAATGTATGTATGAAATTGAAAAAAAATAGGATATGCA
TTGATATTGATAGTATAAAATCATTTTATACTAACAATCAATTACCATCG
TATATCTCGTCAAATCAGATCGTAATTTTTAAGTTAACGGTATGATATGA
GTATGACGAGTAATGAATTTCTATTAAATGATAGTATAAAATTATTTTAT
ACTTCAATGCATAACCATTAAACTCTGGATTTTTTTTAACTTCTAGTCCT
AATATTTTAAAATCCAACTACTTGTTTACTCAACTTTATTTTTTTAAAGA
TTTTGTTAATCCCCCTCTCCAATTTTGTACATATGACATAAGATAACAAA
TTATTTTTAAGGACGTGGTAATTATGATTAGGGTAATTTATTAATTAATA
TTTTTATAAAATAAATTAATAATTTTAATTAAATTTTATTAGAAGAATAT
TGATAAGTGTTACGGGAGTTCACAAGAATAACAAGAATTTATACGTGTCA
TATTTAAAATACAAATTATGAAATGCCATTTTGAGTTAGTGTAAAGTATA
TAAATAATGAATGAGAGAAGAGTGAAATCAGAGCATTTAACTCGACATAT
CCTTTTGAATCTTGAACCCCATTTTGTATGAATAAACAATATTATCTATG
TAAAAAAATTTCACTCATTTTTAAAATTCCCAATTTTCACGTGTGAATTT
GAAGTCTCGGGATAATATCGGAAAATCCGTATCTTCTACTAAAAATTTCA
AAATCAATAAATTTTTTATCATAAATTACTAAATTTGCGTGATTTTGTAT
TGAAAATTTCAAAATTTTCAGTAATAATGAAAATATTTTAACTAGAATAT
TTAAAATTTATGGTACAAAATCACCTGAGAATTCTCGAAAATTTCAAATT
TTCTGGTAGTTATAACAACTTTGTTTTTTTATCTGAAATTTCAGAATTTC
AGGTAGTTATTAATTTTTCTTCCCGACTTTTGCAGGGAAATACAGAGGCA
GAGGCAACACAATTACAGGCAAAGCGATAAATAAAGCGACAAACCAGGAT
ATGACTGCTAAGATCGAGTCTTCCCAGATACAGGTTGGATGAGTGGTTCC
AACCGGTTCACATTGGAAACAGTTGGCTGAGCAGGGGTAGTTCTGCGCAC
CCCGTAGCACCCGACGCCAATCGTTAGAACAATTGAGTAACCCATAGATG
ATGCTAAAGTTGATCATGCTCAGGATGTTCATGACCCAGCGTTCAAGACA
GACATAACACATATTGCTGATAAGATGGTTGTTGTTAAGGCGGTTGTTGA
TGAGGTGGTCCAGCCAGATACCGATGTTGCAAATGAGATGGTCCATCCAG
ATGTTGTTGTTGATCCAATCCCATATACTACTGTTGACACAGAGCTCGCG
GCTCCTTCGACCGAGTCGTCTGTGCACACTGATGGAGGATTTTCAGGAGG
ACCCATTGAATGA

Coding sequence (CDS) from alignment at chr6LG2:3718273..3722385-

>Psat6g005240.1_Ps_Cameor_v1a ID=Psat6g005240.1_Ps_Cameor_v1a; Name=Psat6g005240.1; organism=Pisum sativum; type=CDS; length=1146bp; location=Sequence derived from: chr6LG2:3718273..3722385- (Pisum sativum
ATGGATTCACAAGGCCAAACAACTTCTTTGCAGCGACTACAGAATGTCGA
AAAGATGGATTCACAAGGCCAAACAACTTCTTTGCAGCGACTACAGAATG
TCGAAAAGAGAATTGTCAAGGTTTTGGAGCTTGCAGGAGGAGTCATGGAT
GAGCTTGCAAGTCCAGTTGGTCCTAGAAAAGATCTTGTTCAAAATCACTG
CCTCGAGTTCATGCAATTAATCAAGAGAATTGTCAAGGTTTTGGAGCTTG
CAGGAGGAGTCATGGATGAGCTTGCAAGTCCAGTTGGTCCTAGAAAAGAT
CTTGTTCAAAATCACTGCCTCGAGTTCATGCAATTAATCAAGGACATCCA
AGTAGCGTTGCGTGATGAAATCAAAAGTGCTTGTGAATACCGTCCATTTG
AAAAATGACATCCAAGTAGCGTTGCGTGATGAAATCAAAAGTGCTTGTGA
ATACCGTCCATTTGAAAAATGGAAATACAGAGGCAGAGGCAACACAATTA
CAGGCAAAGCGATAAATAAAGCGACAAACCAGGATATGACTGCTAAGATC
GAGTCTTCCCAGATACAGGGAAATACAGAGGCAGAGGCAACACAATTACA
GGCAAAGCGATAAATAAAGCGACAAACCAGGATATGACTGCTAAGATCGA
GTCTTCCCAGATACAGGATGTTCATGACCCAGCGTTCAAGACAGACATAA
CACATATTGCTGATAAGATGGTTGTTGTTAAGGCGGTTGTTGATGAGGTG
GTCCAGCCAGATACCGATGTTGCAAATGAGATGGTCCATCCAGATGTTGT
TGTTGATCCAATCCCATATACTACTGTTGACACAGAGCTCGCGGCTCCTT
CGACCGAGTCGTCTGTGCACACTGATGGAGGATTTTCAGGAGGACCCATT
GAATGAGATGTTCATGACCCAGCGTTCAAGACAGACATAACACATATTGC
TGATAAGATGGTTGTTGTTAAGGCGGTTGTTGATGAGGTGGTCCAGCCAG
ATACCGATGTTGCAAATGAGATGGTCCATCCAGATGTTGTTGTTGATCCA
ATCCCATATACTACTGTTGACACAGAGCTCGCGGCTCCTTCGACCGAGTC
GTCTGTGCACACTGATGGAGGATTTTCAGGAGGACCCATTGAATGA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR019404	Mediator_Med11

Vocabulary: **Molecular Function**
Term	Definition
GO:0003712	transcription coregulator activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006357	regulation of transcription by RNA polymerase II

Vocabulary: **Cellular Component**
Term	Definition
GO:0016592	mediator complex

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