Psat6g005240.1

Transcript Overview
NamePsat6g005240.1
Unique NamePsat6g005240.1_Ps_Cameor_v1a
TypemRNA
OrganismPisum sativum (pea)
Sequence length4113
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr6LG2supercontigchr6LG2:3718273..3722385 -Pisum sativum Cameor genome v1an/a
chr6LG2supercontigchr6LG2:3718273..3722385 -Pisum sativum Cameor genome v1an/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan: P. sativum Cameor genome v1a2019-09-12
BLAST: P. sativum Cameor genome v1a vs. Swissprot2019-09-12
Pisum sativum Cameor genome v1a2019-09-06
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
crpsL366Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crpsL373Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crpsL479Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
caipsL401Cicer arietinum ICC 4958 genome v2Cicer arietinum
capsL340Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
capsL428Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
psvuR622Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
psvuR651Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pspvR580Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pspvR700Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccpsL806Cajanus cajan Asha genome v1.0Cajanus cajan
anpsL0097Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpsL0304Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpsL0351Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpsL0649Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
pszwsR580Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pszwsR594Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pstifR574Vicia faba cv. Tiffany genome v1.0Vicia faba
pstifR649Vicia faba cv. Tiffany genome v1.0Vicia faba
psvfhR554Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
psvfhR634Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
psvrvR508Vigna radiata cv. VC1973A genome v6.0Vigna radiata
psvrvR512Vigna radiata cv. VC1973A genome v6.0Vigna radiata
psvuaR592Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
psvuaR599Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
psvssR709Vicia sativa cv. Studenica genome v1.0Vicia sativa
psvssR715Vicia sativa cv. Studenica genome v1.0Vicia sativa
canpsL343Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canpsL442Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjpsL597Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpsL764Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carpsL320Cicer arietinum
ccapsL546Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapsL663Cajanus cajan cv. Asha genome v2.0Cajanus cajan
psvumR664Vigna umbellata FF25 genome v1.0Vigna umbellata
psvumR692Vigna umbellata FF25 genome v1.0Vigna umbellata
psvvaR756Vicia villosa cv. AU Merit genome v1.0Vicia villosa
psvasR583Vigna angularis cv. Shumari genome v1.a1Vigna angularis
psvasR599Vigna angularis cv. Shumari genome v1.a1Vigna angularis
psvstR592Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
psvstR619Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pspvfR606Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
psvunR596Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
psvunR623Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
pspvfR737Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
jg35126.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Tiffany.R1.3g191400.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Ca_08667.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Ca_10763Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Cr_07763.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Vfaba.Hedin2.R1.3g234760.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-XM_004499158.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
XM_058869362.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Psat06G0014100-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Psat6g005240Psat6g005240_Ps_Cameor_v1aPisum sativumgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Psat6g005240.1Psat6g005240.1_Ps_Cameor_v1a-proteinPisum sativumpolypeptide
Psat6g005240.1_Ps_Cameor_v1aPsat6g005240.1_Ps_Cameor_v1aPisum sativumpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Psat6g005240.1.exon1Psat6g005240.1.exon1_Ps_Cameor_v1aPisum sativumexon
Psat6g005240.1.exon2Psat6g005240.1.exon2_Ps_Cameor_v1aPisum sativumexon
Psat6g005240.1.exon3Psat6g005240.1.exon3_Ps_Cameor_v1aPisum sativumexon
Psat6g005240.1.exon4Psat6g005240.1.exon4_Ps_Cameor_v1aPisum sativumexon
Psat6g005240.1.exon5Psat6g005240.1.exon5_Ps_Cameor_v1aPisum sativumexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Psat6g005240.1.cds1Psat6g005240.1.cds1_Ps_Cameor_v1aPisum sativumCDS
Psat6g005240.1.cds2Psat6g005240.1.cds2_Ps_Cameor_v1aPisum sativumCDS
Psat6g005240.1.cds3Psat6g005240.1.cds3_Ps_Cameor_v1aPisum sativumCDS
Psat6g005240.1.cds4Psat6g005240.1.cds4_Ps_Cameor_v1aPisum sativumCDS
Psat6g005240.1.cds5Psat6g005240.1.cds5_Ps_Cameor_v1aPisum sativumCDS


Homology
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BLAST of Psat6g005240.1 vs. DB:Swiss
Match: MED11_ARATH (Mediator of RNA polymerase II transcription subunit 11 OS=Arabidopsis thaliana OX=3702 GN=MED11 PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.185e-40
Identity = 63/84 (75.00%), Postives = 70/84 (83.33%), Query Frame = 1 
Query:    1 MDSQGQTTSLQRLQNVEKRIVKVLELAGGVMDELASPVGPRKDLVQNHCLEFMQLIKDIQVALRDEIKSACEYRPFEKWKYRGR 252
            MD Q Q TSLQRLQNVE R+VKVLELAGGVM+ELASP GP+K+ V +HC EFMQ +KDIQV LR+EIKSACEYRPFEK  Y  R
Sbjct:    1 MDPQTQNTSLQRLQNVENRVVKVLELAGGVMEELASPSGPKKEFVNSHCREFMQSMKDIQVTLREEIKSACEYRPFEKCDYNAR 84
The following BLAST results are available for this feature:
BLAST of Psat6g005240.1 vs. DB:Swiss
Analysis Date: 2019-09-12 (BLAST: P. sativum Cameor genome v1a vs. Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
MED11_ARATH1.185e-4075.00Mediator of RNA polymerase II transcription subuni... [more]
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InterPro
Analysis Name: InterProScan: P. sativum Cameor genome v1a
Date Performed: 2019-09-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019404Mediator complex, subunit Med11PFAMPF10280Med11coord: 9..96
e-value: 2.4E-12
score: 47.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 169..190

Sequences
The following sequences are available for this feature:

mRNA sequence

>Psat6g005240.1_Ps_Cameor_v1a ID=Psat6g005240.1_Ps_Cameor_v1a; Name=Psat6g005240.1; organism=Pisum sativum; type=mRNA; length=4113bp
ATGGATTCACAAGGCCAAACAACTTCTTTGCAGCGACTACAGAATGTCGA
AAAGGTATTAATCTTTTCACTCATGCTTGATTTTTTGTAGAGAATTATGA
AGAGAATTGTTTGATTTTATGTTGTGTTTAGAGAATTGTCAAGGTTTTGG
AGCTTGCAGGAGGAGTCATGGATGAGCTTGCAAGTCCAGTTGGTCCTAGA
AAAGATCTTGTTCAAAATCACTGCCTCGAGTTCATGCAATTAATCAAGGT
ATTACTTATTCTCTCTCAATTATTATAACTATAGATTCGCGTGCGTCTTC
ATTTCAATAATTAACATTAGCTTCATTTAAGGTTGAGTACCTTGCATTGT
GTCACATTAATAGTTTTTATCAAGTTTATTGCACTATGTTAGAAAAGAAC
TACTGCAAGCCATATTCATCCATTGAAAGGAGACTAACATAGTTAGTTAG
AGGTTGTTAAACTTGTTTTCAATTACACTAATCTTGTTCTCACATCATAT
TGTGATTTGCACCTGTTTTCCTCTGAGCTGAAATTGAACTGTGAATCTAT
TTTGTAATTGGCTTTTTTTTTATTGAGGGATGTAGTTTGGAGGATAAAGT
GTCAAGTTATAATATATGGATCAAATATGCTATGAGACTTTGATGACTTT
ATAGTTTGATAATACTGTTGTCAAATAGTGGTGATAGCAGTGCTATGACA
CAGAGGGTTTTGATGAATCCGCTATTAAAACCATGACGCTATCCTTGTTT
TGCTATTATAGCAACAGCGGCCGCTATTCCAGTTTCTGCTAACAGATGTA
GCGGCATTAACGGAAAAAAATTGGGTTTTAAAAATAATGAAACTGAAGAG
TTTGCATCTATACCAACACAAAATCTATTTTTAAAATATGTAAAGCTATG
CTTGGCCTCCATTCCCTTTTTCTTTGTATGCAAATGCAACATGCCTTCTT
TATTTATCATTGACTTCATTCAGCTGCAATGCGGCGTCCACAATTTGCCC
ATGATGCTATTTTCTATTACAAAGAGCTGGTTTTGACATTACACTTTCCG
CAATCTGCTATTAATAACATTATATTCAACAATGTCTTTTTATCACAATT
ATATCCATTGATTTTCAATTACAATTAACGGTTATATCTTCACTTTATTC
TCTTTATAGGTATCAAATCCGAATAAACTTGTGATATAACATACTTAGAT
ATCTTTTATCATCGAACCATTAGCACTTTGATAACCGTTTATTAAAAAAA
TTGTCTCGTTTCCTCATGTTGTGTGTTTTCATGCTTTGTTTTCACAGCTA
TGATAAAACACATCCTTTGTAATTTTGGTCTTTGAATCCTAAGAAAACTA
ATGCTCATTATGTTCAAAATGTTCATATTCATTATTAAAATCATGACTGA
ATTACCCAAGACAGATTGAATGTGGCAGAGTCAGATTGAGATGCCCTTGA
GTGGATTGTATTAGAATAAATACCTTTAATAGAATTAGTTGTGTTTGAAA
ATGCTTACTATATTTCACAATAATGGGTTCTGTCCTGTTAGTTATTGGAG
TATATAAGTGTGTGTATGGTTTTCTGATGGCATGATGTCACTTTCTCCCT
AATTGTTGGCAAGTTTAGTTATTCAGAATTAGTAGTGAAAATGATACTGT
AATTTTGTAAGGTTCTTTAACCTTTATTTTCTGTTTAAACTTTTTAGGAC
ATCCAAGTAGCGTTGCGTGATGAAATCAAAAGTGCTTGTGAATACCGTCC
ATTTGAAAAATGTGATTATGGTCCAAGAATAGCCAATGAGATATGTTTCA
AGAAGGTGGAATATGTCATGTCTCAGTTGGATGCAATTAAAAAAACTATA
GATGGGTATACTGCAGAACCCTGACAATCTTTAGTTCATCCTATAGAAGC
TGCATCATTTAGAGGGCAGTGCTGCAAGTGACTCATTTATGTATTCATTT
AGAGGGCTATTTGGACAATATGCATGTATTGTCTGTCTGTCTACCTTGTA
CACTAAACATGTAAATGCCTGATTGTGAAGTAGAGGATTTAATATTCATA
ATTAGTTGCTGTTGAAGCCATTTACTGTACTTACTAGCAACACTTTTTTG
TTTTTGGAATTGTGTAAAATTGATTTTGAAGTTTAGAATGAGGGGGAATT
TTTTTTTATCAGTAGACGAAATGGTAATATTAACTAAAATTTTACGTATA
TGACCGTAAGTATCATCTTTGAACCTTAGTGATGGCTTCCAACCTATCAA
TATAGGTTTCTGTCAAGCTAAGAGGGATTTTGTTTCTCACAATATGAATC
AAGATCATGATAACACACAAGCATAACAGGACAAACAAATAAGTACTGAT
ATTTGTCTTGAAAATAGAAGTTAAATCATTTTGTTGATATAATAATAATT
ACATTATTTTTCCATACCAAATTACCACCTTTAGTTTCTTAAATTAGGCA
ACATAATCCGGATAATCCGGATTTGCGGGTACCAAATTACCAACCAACTT
AGTATTGTTATGTTCATTTCATTATTTACTTTATTATATATTAAATATTT
ATTATATATTAAATATATATGGTCTAGTATAATTTAGTTTTATTATTGAG
TATATTAAAAATGTGTTTAATATTTTGATATTTTAATTTTTATTTATCGT
TAAAAATATTAGAAATGTATGTATGAAATTGAAAAAAAATAGGATATGCA
TTGATATTGATAGTATAAAATCATTTTATACTAACAATCAATTACCATCG
TATATCTCGTCAAATCAGATCGTAATTTTTAAGTTAACGGTATGATATGA
GTATGACGAGTAATGAATTTCTATTAAATGATAGTATAAAATTATTTTAT
ACTTCAATGCATAACCATTAAACTCTGGATTTTTTTTAACTTCTAGTCCT
AATATTTTAAAATCCAACTACTTGTTTACTCAACTTTATTTTTTTAAAGA
TTTTGTTAATCCCCCTCTCCAATTTTGTACATATGACATAAGATAACAAA
TTATTTTTAAGGACGTGGTAATTATGATTAGGGTAATTTATTAATTAATA
TTTTTATAAAATAAATTAATAATTTTAATTAAATTTTATTAGAAGAATAT
TGATAAGTGTTACGGGAGTTCACAAGAATAACAAGAATTTATACGTGTCA
TATTTAAAATACAAATTATGAAATGCCATTTTGAGTTAGTGTAAAGTATA
TAAATAATGAATGAGAGAAGAGTGAAATCAGAGCATTTAACTCGACATAT
CCTTTTGAATCTTGAACCCCATTTTGTATGAATAAACAATATTATCTATG
TAAAAAAATTTCACTCATTTTTAAAATTCCCAATTTTCACGTGTGAATTT
GAAGTCTCGGGATAATATCGGAAAATCCGTATCTTCTACTAAAAATTTCA
AAATCAATAAATTTTTTATCATAAATTACTAAATTTGCGTGATTTTGTAT
TGAAAATTTCAAAATTTTCAGTAATAATGAAAATATTTTAACTAGAATAT
TTAAAATTTATGGTACAAAATCACCTGAGAATTCTCGAAAATTTCAAATT
TTCTGGTAGTTATAACAACTTTGTTTTTTTATCTGAAATTTCAGAATTTC
AGGTAGTTATTAATTTTTCTTCCCGACTTTTGCAGGGAAATACAGAGGCA
GAGGCAACACAATTACAGGCAAAGCGATAAATAAAGCGACAAACCAGGAT
ATGACTGCTAAGATCGAGTCTTCCCAGATACAGGTTGGATGAGTGGTTCC
AACCGGTTCACATTGGAAACAGTTGGCTGAGCAGGGGTAGTTCTGCGCAC
CCCGTAGCACCCGACGCCAATCGTTAGAACAATTGAGTAACCCATAGATG
ATGCTAAAGTTGATCATGCTCAGGATGTTCATGACCCAGCGTTCAAGACA
GACATAACACATATTGCTGATAAGATGGTTGTTGTTAAGGCGGTTGTTGA
TGAGGTGGTCCAGCCAGATACCGATGTTGCAAATGAGATGGTCCATCCAG
ATGTTGTTGTTGATCCAATCCCATATACTACTGTTGACACAGAGCTCGCG
GCTCCTTCGACCGAGTCGTCTGTGCACACTGATGGAGGATTTTCAGGAGG
ACCCATTGAATGA
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protein sequence of Psat6g005240.1_Ps_Cameor_v1a

>Psat6g005240.1_Ps_Cameor_v1a ID=Psat6g005240.1_Ps_Cameor_v1a; Name=Psat6g005240.1_Ps_Cameor_v1a; organism=Pisum sativum; type=polypeptide; length=191bp
MDSQGQTTSLQRLQNVEKRIVKVLELAGGVMDELASPVGPRKDLVQNHCL
EFMQLIKDIQVALRDEIKSACEYRPFEKWKYRGRGNTITGKAINKATNQD
MTAKIESSQIQDVHDPAFKTDITHIADKMVVVKAVVDEVVQPDTDVANEM
VHPDVVVDPIPYTTVDTELAAPSTESSVHTDGGFSGGPIE*
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mRNA from alignment at chr6LG2:3718273..3722385-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Psat6g005240.1_Ps_Cameor_v1a ID=Psat6g005240.1_Ps_Cameor_v1a; Name=Psat6g005240.1; organism=Pisum sativum; type=mRNA; length=4113bp; location=Sequence derived from: chr6LG2:3718273..3722385- (Pisum sativum
ATGGATTCACAAGGCCAAACAACTTCTTTGCAGCGACTACAGAATGTCGA
AAAGGTATTAATCTTTTCACTCATGCTTGATTTTTTGTAGAGAATTATGA
AGAGAATTGTTTGATTTTATGTTGTGTTTAGAGAATTGTCAAGGTTTTGG
AGCTTGCAGGAGGAGTCATGGATGAGCTTGCAAGTCCAGTTGGTCCTAGA
AAAGATCTTGTTCAAAATCACTGCCTCGAGTTCATGCAATTAATCAAGGT
ATTACTTATTCTCTCTCAATTATTATAACTATAGATTCGCGTGCGTCTTC
ATTTCAATAATTAACATTAGCTTCATTTAAGGTTGAGTACCTTGCATTGT
GTCACATTAATAGTTTTTATCAAGTTTATTGCACTATGTTAGAAAAGAAC
TACTGCAAGCCATATTCATCCATTGAAAGGAGACTAACATAGTTAGTTAG
AGGTTGTTAAACTTGTTTTCAATTACACTAATCTTGTTCTCACATCATAT
TGTGATTTGCACCTGTTTTCCTCTGAGCTGAAATTGAACTGTGAATCTAT
TTTGTAATTGGCTTTTTTTTTATTGAGGGATGTAGTTTGGAGGATAAAGT
GTCAAGTTATAATATATGGATCAAATATGCTATGAGACTTTGATGACTTT
ATAGTTTGATAATACTGTTGTCAAATAGTGGTGATAGCAGTGCTATGACA
CAGAGGGTTTTGATGAATCCGCTATTAAAACCATGACGCTATCCTTGTTT
TGCTATTATAGCAACAGCGGCCGCTATTCCAGTTTCTGCTAACAGATGTA
GCGGCATTAACGGAAAAAAATTGGGTTTTAAAAATAATGAAACTGAAGAG
TTTGCATCTATACCAACACAAAATCTATTTTTAAAATATGTAAAGCTATG
CTTGGCCTCCATTCCCTTTTTCTTTGTATGCAAATGCAACATGCCTTCTT
TATTTATCATTGACTTCATTCAGCTGCAATGCGGCGTCCACAATTTGCCC
ATGATGCTATTTTCTATTACAAAGAGCTGGTTTTGACATTACACTTTCCG
CAATCTGCTATTAATAACATTATATTCAACAATGTCTTTTTATCACAATT
ATATCCATTGATTTTCAATTACAATTAACGGTTATATCTTCACTTTATTC
TCTTTATAGGTATCAAATCCGAATAAACTTGTGATATAACATACTTAGAT
ATCTTTTATCATCGAACCATTAGCACTTTGATAACCGTTTATTAAAAAAA
TTGTCTCGTTTCCTCATGTTGTGTGTTTTCATGCTTTGTTTTCACAGCTA
TGATAAAACACATCCTTTGTAATTTTGGTCTTTGAATCCTAAGAAAACTA
ATGCTCATTATGTTCAAAATGTTCATATTCATTATTAAAATCATGACTGA
ATTACCCAAGACAGATTGAATGTGGCAGAGTCAGATTGAGATGCCCTTGA
GTGGATTGTATTAGAATAAATACCTTTAATAGAATTAGTTGTGTTTGAAA
ATGCTTACTATATTTCACAATAATGGGTTCTGTCCTGTTAGTTATTGGAG
TATATAAGTGTGTGTATGGTTTTCTGATGGCATGATGTCACTTTCTCCCT
AATTGTTGGCAAGTTTAGTTATTCAGAATTAGTAGTGAAAATGATACTGT
AATTTTGTAAGGTTCTTTAACCTTTATTTTCTGTTTAAACTTTTTAGGAC
ATCCAAGTAGCGTTGCGTGATGAAATCAAAAGTGCTTGTGAATACCGTCC
ATTTGAAAAATGTGATTATGGTCCAAGAATAGCCAATGAGATATGTTTCA
AGAAGGTGGAATATGTCATGTCTCAGTTGGATGCAATTAAAAAAACTATA
GATGGGTATACTGCAGAACCCTGACAATCTTTAGTTCATCCTATAGAAGC
TGCATCATTTAGAGGGCAGTGCTGCAAGTGACTCATTTATGTATTCATTT
AGAGGGCTATTTGGACAATATGCATGTATTGTCTGTCTGTCTACCTTGTA
CACTAAACATGTAAATGCCTGATTGTGAAGTAGAGGATTTAATATTCATA
ATTAGTTGCTGTTGAAGCCATTTACTGTACTTACTAGCAACACTTTTTTG
TTTTTGGAATTGTGTAAAATTGATTTTGAAGTTTAGAATGAGGGGGAATT
TTTTTTTATCAGTAGACGAAATGGTAATATTAACTAAAATTTTACGTATA
TGACCGTAAGTATCATCTTTGAACCTTAGTGATGGCTTCCAACCTATCAA
TATAGGTTTCTGTCAAGCTAAGAGGGATTTTGTTTCTCACAATATGAATC
AAGATCATGATAACACACAAGCATAACAGGACAAACAAATAAGTACTGAT
ATTTGTCTTGAAAATAGAAGTTAAATCATTTTGTTGATATAATAATAATT
ACATTATTTTTCCATACCAAATTACCACCTTTAGTTTCTTAAATTAGGCA
ACATAATCCGGATAATCCGGATTTGCGGGTACCAAATTACCAACCAACTT
AGTATTGTTATGTTCATTTCATTATTTACTTTATTATATATTAAATATTT
ATTATATATTAAATATATATGGTCTAGTATAATTTAGTTTTATTATTGAG
TATATTAAAAATGTGTTTAATATTTTGATATTTTAATTTTTATTTATCGT
TAAAAATATTAGAAATGTATGTATGAAATTGAAAAAAAATAGGATATGCA
TTGATATTGATAGTATAAAATCATTTTATACTAACAATCAATTACCATCG
TATATCTCGTCAAATCAGATCGTAATTTTTAAGTTAACGGTATGATATGA
GTATGACGAGTAATGAATTTCTATTAAATGATAGTATAAAATTATTTTAT
ACTTCAATGCATAACCATTAAACTCTGGATTTTTTTTAACTTCTAGTCCT
AATATTTTAAAATCCAACTACTTGTTTACTCAACTTTATTTTTTTAAAGA
TTTTGTTAATCCCCCTCTCCAATTTTGTACATATGACATAAGATAACAAA
TTATTTTTAAGGACGTGGTAATTATGATTAGGGTAATTTATTAATTAATA
TTTTTATAAAATAAATTAATAATTTTAATTAAATTTTATTAGAAGAATAT
TGATAAGTGTTACGGGAGTTCACAAGAATAACAAGAATTTATACGTGTCA
TATTTAAAATACAAATTATGAAATGCCATTTTGAGTTAGTGTAAAGTATA
TAAATAATGAATGAGAGAAGAGTGAAATCAGAGCATTTAACTCGACATAT
CCTTTTGAATCTTGAACCCCATTTTGTATGAATAAACAATATTATCTATG
TAAAAAAATTTCACTCATTTTTAAAATTCCCAATTTTCACGTGTGAATTT
GAAGTCTCGGGATAATATCGGAAAATCCGTATCTTCTACTAAAAATTTCA
AAATCAATAAATTTTTTATCATAAATTACTAAATTTGCGTGATTTTGTAT
TGAAAATTTCAAAATTTTCAGTAATAATGAAAATATTTTAACTAGAATAT
TTAAAATTTATGGTACAAAATCACCTGAGAATTCTCGAAAATTTCAAATT
TTCTGGTAGTTATAACAACTTTGTTTTTTTATCTGAAATTTCAGAATTTC
AGGTAGTTATTAATTTTTCTTCCCGACTTTTGCAGGGAAATACAGAGGCA
GAGGCAACACAATTACAGGCAAAGCGATAAATAAAGCGACAAACCAGGAT
ATGACTGCTAAGATCGAGTCTTCCCAGATACAGGTTGGATGAGTGGTTCC
AACCGGTTCACATTGGAAACAGTTGGCTGAGCAGGGGTAGTTCTGCGCAC
CCCGTAGCACCCGACGCCAATCGTTAGAACAATTGAGTAACCCATAGATG
ATGCTAAAGTTGATCATGCTCAGGATGTTCATGACCCAGCGTTCAAGACA
GACATAACACATATTGCTGATAAGATGGTTGTTGTTAAGGCGGTTGTTGA
TGAGGTGGTCCAGCCAGATACCGATGTTGCAAATGAGATGGTCCATCCAG
ATGTTGTTGTTGATCCAATCCCATATACTACTGTTGACACAGAGCTCGCG
GCTCCTTCGACCGAGTCGTCTGTGCACACTGATGGAGGATTTTCAGGAGG
ACCCATTGAATGA
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Coding sequence (CDS) from alignment at chr6LG2:3718273..3722385-

>Psat6g005240.1_Ps_Cameor_v1a ID=Psat6g005240.1_Ps_Cameor_v1a; Name=Psat6g005240.1; organism=Pisum sativum; type=CDS; length=1146bp; location=Sequence derived from: chr6LG2:3718273..3722385- (Pisum sativum
ATGGATTCACAAGGCCAAACAACTTCTTTGCAGCGACTACAGAATGTCGA
AAAGATGGATTCACAAGGCCAAACAACTTCTTTGCAGCGACTACAGAATG
TCGAAAAGAGAATTGTCAAGGTTTTGGAGCTTGCAGGAGGAGTCATGGAT
GAGCTTGCAAGTCCAGTTGGTCCTAGAAAAGATCTTGTTCAAAATCACTG
CCTCGAGTTCATGCAATTAATCAAGAGAATTGTCAAGGTTTTGGAGCTTG
CAGGAGGAGTCATGGATGAGCTTGCAAGTCCAGTTGGTCCTAGAAAAGAT
CTTGTTCAAAATCACTGCCTCGAGTTCATGCAATTAATCAAGGACATCCA
AGTAGCGTTGCGTGATGAAATCAAAAGTGCTTGTGAATACCGTCCATTTG
AAAAATGACATCCAAGTAGCGTTGCGTGATGAAATCAAAAGTGCTTGTGA
ATACCGTCCATTTGAAAAATGGAAATACAGAGGCAGAGGCAACACAATTA
CAGGCAAAGCGATAAATAAAGCGACAAACCAGGATATGACTGCTAAGATC
GAGTCTTCCCAGATACAGGGAAATACAGAGGCAGAGGCAACACAATTACA
GGCAAAGCGATAAATAAAGCGACAAACCAGGATATGACTGCTAAGATCGA
GTCTTCCCAGATACAGGATGTTCATGACCCAGCGTTCAAGACAGACATAA
CACATATTGCTGATAAGATGGTTGTTGTTAAGGCGGTTGTTGATGAGGTG
GTCCAGCCAGATACCGATGTTGCAAATGAGATGGTCCATCCAGATGTTGT
TGTTGATCCAATCCCATATACTACTGTTGACACAGAGCTCGCGGCTCCTT
CGACCGAGTCGTCTGTGCACACTGATGGAGGATTTTCAGGAGGACCCATT
GAATGAGATGTTCATGACCCAGCGTTCAAGACAGACATAACACATATTGC
TGATAAGATGGTTGTTGTTAAGGCGGTTGTTGATGAGGTGGTCCAGCCAG
ATACCGATGTTGCAAATGAGATGGTCCATCCAGATGTTGTTGTTGATCCA
ATCCCATATACTACTGTTGACACAGAGCTCGCGGCTCCTTCGACCGAGTC
GTCTGTGCACACTGATGGAGGATTTTCAGGAGGACCCATTGAATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR019404Mediator_Med11
Vocabulary: Molecular Function
TermDefinition
GO:0003712transcription coregulator activity
Vocabulary: Biological Process
TermDefinition
GO:0006357regulation of transcription by RNA polymerase II
Vocabulary: Cellular Component
TermDefinition
GO:0016592mediator complex