Psat6g029960.1

Transcript Overview
NamePsat6g029960.1
Unique NamePsat6g029960.1_Ps_Cameor_v1a
TypemRNA
OrganismPisum sativum (pea)
Sequence length2682
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr6LG2supercontigchr6LG2:23295828..23298509 -Pisum sativum Cameor genome v1an/a
chr6LG2supercontigchr6LG2:23295828..23298509 -Pisum sativum Cameor genome v1an/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan: P. sativum Cameor genome v1a2019-09-12
BLAST: P. sativum Cameor genome v1a vs. Swissprot2019-09-12
Pisum sativum Cameor genome v1a2019-09-06
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
crpsL091Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
capsL331Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
capsL355Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
capsL432Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
psvuR620Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
psvuR649Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pspvR578Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pspvR696Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccpsL544Cajanus cajan Asha genome v1.0Cajanus cajan
anpsL0050Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpsL0096Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpsL0220Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpsL0303Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpsL0349Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpsL0652Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpsL0655Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpsL0844Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpsL0847Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
aspsL578Vigna angularis Jingnong 6 genome v1.1Vigna angularis
aspsL638Vigna angularis Jingnong 6 genome v1.1Vigna angularis
pszwsR589Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pstifR569Vicia faba cv. Tiffany genome v1.0Vicia faba
pstifR641Vicia faba cv. Tiffany genome v1.0Vicia faba
psvfhR549Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
psvfhR626Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
psvrvR507Vigna radiata cv. VC1973A genome v6.0Vigna radiata
psvrvR524Vigna radiata cv. VC1973A genome v6.0Vigna radiata
psvuaR590Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
psvuaR598Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
psvssR704Vicia sativa cv. Studenica genome v1.0Vicia sativa
psvssR712Vicia sativa cv. Studenica genome v1.0Vicia sativa
canpsL336Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canpsL355Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canpsL447Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjpsL295Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpsL596Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpsL654Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpsL779Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpsL788Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carpsL318Cicer arietinum
carpsL332Cicer arietinum
carpsL442Cicer arietinum
ccapsL396Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapsL525Cajanus cajan cv. Asha genome v2.0Cajanus cajan
psvumR663Vigna umbellata FF25 genome v1.0Vigna umbellata
psvumR691Vigna umbellata FF25 genome v1.0Vigna umbellata
psvumR716Vigna umbellata FF25 genome v1.0Vigna umbellata
psvvaR709Vicia villosa cv. AU Merit genome v1.0Vicia villosa
psvvaR752Vicia villosa cv. AU Merit genome v1.0Vicia villosa
psvasR582Vigna angularis cv. Shumari genome v1.a1Vigna angularis
psvstR591Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
psvasR615Vigna angularis cv. Shumari genome v1.a1Vigna angularis
psvstR618Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
psvasR638Vigna angularis cv. Shumari genome v1.a1Vigna angularis
psvstR643Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pspvfR604Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
psvunR594Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
psvunR621Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
pspvfR654Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pspvfR734Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
rna-KK1_005033Cajanus cajan Asha genome v1.0Cajanus cajan
rna-XM_004498592.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Psat6g029960Psat6g029960_Ps_Cameor_v1aPisum sativumgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Psat6g029960.1Psat6g029960.1_Ps_Cameor_v1a-proteinPisum sativumpolypeptide
Psat6g029960.1_Ps_Cameor_v1aPsat6g029960.1_Ps_Cameor_v1aPisum sativumpolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Psat6g029960.1.five_prime_utr1Psat6g029960.1.five_prime_utr1_Ps_Cameor_v1aPisum sativumfive_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Psat6g029960.1.exon1Psat6g029960.1.exon1_Ps_Cameor_v1aPisum sativumexon
Psat6g029960.1.exon2Psat6g029960.1.exon2_Ps_Cameor_v1aPisum sativumexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Psat6g029960.1.cds1Psat6g029960.1.cds1_Ps_Cameor_v1aPisum sativumCDS
Psat6g029960.1.cds2Psat6g029960.1.cds2_Ps_Cameor_v1aPisum sativumCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Psat6g029960.1.three_prime_utr1Psat6g029960.1.three_prime_utr1_Ps_Cameor_v1aPisum sativumthree_prime_UTR


Homology
[Close]
BLAST of Psat6g029960.1 vs. DB:Swiss
Match: H2AV1_ORYSJ (Probable histone H2A variant 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0162200 PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 2.706e-65
Identity = 98/102 (96.08%), Postives = 99/102 (97.06%), Query Frame = 1 
Query:   97 AGLQFPVGRIHRLLKSRTMAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSSKE 402
            AGLQFPVGRIHR LKSR  AHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK+SKE
Sbjct:   37 AGLQFPVGRIHRQLKSRASAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTSKE 138
[Close]
BLAST of Psat6g029960.1 vs. DB:Swiss
Match: H2AV3_ORYSJ (Probable histone H2A variant 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0743400 PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.150e-64
Identity = 98/102 (96.08%), Postives = 99/102 (97.06%), Query Frame = 1 
Query:   97 AGLQFPVGRIHRLLKSRTMAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSSKE 402
            AGLQFPVGRIHR LK RT A+GRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSSKE
Sbjct:   36 AGLQFPVGRIHRQLKQRTQANGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSSKE 137
[Close]
BLAST of Psat6g029960.1 vs. DB:Swiss
Match: H2AV3_ARATH (Probable histone H2A variant 3 OS=Arabidopsis thaliana OX=3702 GN=At1g52740 PE=1 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.022e-64
Identity = 95/102 (93.14%), Postives = 101/102 (99.02%), Query Frame = 1 
Query:   97 AGLQFPVGRIHRLLKSRTMAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSSKE 402
            AGLQFPVGR+HRLLK+R+ AHGRVGATAAVY+AAILEYLTAEVLELAGNASKDLKVKRI+PRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKS+KE
Sbjct:   33 AGLQFPVGRVHRLLKTRSTAHGRVGATAAVYTAAILEYLTAEVLELAGNASKDLKVKRISPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSAKE 134
[Close]
BLAST of Psat6g029960.1 vs. DB:Swiss
Match: H2AV1_ARATH (Histone H2A variant 1 OS=Arabidopsis thaliana OX=3702 GN=H2AV PE=1 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 8.546e-63
Identity = 93/102 (91.18%), Postives = 99/102 (97.06%), Query Frame = 1 
Query:   97 AGLQFPVGRIHRLLKSRTMAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSSKE 402
            AG+QFPVGRIHR LK+R  AHGRVGATAAVY+A+ILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK++KE
Sbjct:   35 AGIQFPVGRIHRQLKTRVSAHGRVGATAAVYTASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTTKE 136
[Close]
BLAST of Psat6g029960.1 vs. DB:Swiss
Match: H2AV2_ORYSJ (Probable histone H2A variant 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0418000 PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 1.426e-61
Identity = 93/102 (91.18%), Postives = 98/102 (96.08%), Query Frame = 1 
Query:   97 AGLQFPVGRIHRLLKSRTMAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSSKE 402
            AG+QFPVGRIHR LK R  A+GRVGATAAVY+AAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK++KE
Sbjct:   38 AGIQFPVGRIHRQLKGRVSANGRVGATAAVYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTAKE 139
[Close]
BLAST of Psat6g029960.1 vs. DB:Swiss
Match: H2AV2_ARATH (Probable histone H2A variant 2 OS=Arabidopsis thaliana OX=3702 GN=At2g38810 PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 2.215e-61
Identity = 91/102 (89.22%), Postives = 97/102 (95.10%), Query Frame = 1 
Query:   97 AGLQFPVGRIHRLLKSRTMAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSSKE 402
            AG+QFPVGRIHR LK R  AHGRVGATAAVY+A+ILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSL+NK +K+
Sbjct:   35 AGIQFPVGRIHRQLKQRVSAHGRVGATAAVYTASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLVNKVTKD 136
[Close]
BLAST of Psat6g029960.1 vs. DB:Swiss
Match: H2AZ_SHEEP (Histone H2A.Z OS=Ovis aries OX=9940 GN=H2AFZ PE=2 SV=3)

HSP 1 Score: 186.037 bits (471), Expect = 7.769e-61
Identity = 92/102 (90.20%), Postives = 96/102 (94.12%), Query Frame = 1 
Query:   97 AGLQFPVGRIHRLLKSRTMAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSSKE 402
            AGLQFPVGRIHR LKSRT +HGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELD+LIK TIAGGGVIPHIHKSLI K  ++
Sbjct:   24 AGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKKGQQ 125
[Close]
BLAST of Psat6g029960.1 vs. DB:Swiss
Match: H2AZ_RAT (Histone H2A.Z OS=Rattus norvegicus OX=10116 GN=H2afz PE=1 SV=2)

HSP 1 Score: 186.037 bits (471), Expect = 7.769e-61
Identity = 92/102 (90.20%), Postives = 96/102 (94.12%), Query Frame = 1 
Query:   97 AGLQFPVGRIHRLLKSRTMAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSSKE 402
            AGLQFPVGRIHR LKSRT +HGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELD+LIK TIAGGGVIPHIHKSLI K  ++
Sbjct:   24 AGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKKGQQ 125
[Close]
BLAST of Psat6g029960.1 vs. DB:Swiss
Match: H2AZ_PONAB (Histone H2A.Z OS=Pongo abelii OX=9601 GN=H2AFZ PE=2 SV=3)

HSP 1 Score: 186.037 bits (471), Expect = 7.769e-61
Identity = 92/102 (90.20%), Postives = 96/102 (94.12%), Query Frame = 1 
Query:   97 AGLQFPVGRIHRLLKSRTMAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSSKE 402
            AGLQFPVGRIHR LKSRT +HGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELD+LIK TIAGGGVIPHIHKSLI K  ++
Sbjct:   24 AGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKKGQQ 125
[Close]
BLAST of Psat6g029960.1 vs. DB:Swiss
Match: H2AZ_ONCMY (Histone H2A.Z OS=Oncorhynchus mykiss OX=8022 GN=h2afz PE=1 SV=4)

HSP 1 Score: 186.037 bits (471), Expect = 7.769e-61
Identity = 92/102 (90.20%), Postives = 96/102 (94.12%), Query Frame = 1 
Query:   97 AGLQFPVGRIHRLLKSRTMAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSSKE 402
            AGLQFPVGRIHR LKSRT +HGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELD+LIK TIAGGGVIPHIHKSLI K  ++
Sbjct:   24 AGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKKGQQ 125
The following BLAST results are available for this feature:
BLAST of Psat6g029960.1 vs. DB:Swiss
Analysis Date: 2019-09-12 (BLAST: P. sativum Cameor genome v1a vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
H2AV1_ORYSJ2.706e-6596.08Probable histone H2A variant 1 OS=Oryza sativa sub... [more]
H2AV3_ORYSJ1.150e-6496.08Probable histone H2A variant 3 OS=Oryza sativa sub... [more]
H2AV3_ARATH3.022e-6493.14Probable histone H2A variant 3 OS=Arabidopsis thal... [more]
H2AV1_ARATH8.546e-6391.18Histone H2A variant 1 OS=Arabidopsis thaliana OX=3... [more]
H2AV2_ORYSJ1.426e-6191.18Probable histone H2A variant 2 OS=Oryza sativa sub... [more]
H2AV2_ARATH2.215e-6189.22Probable histone H2A variant 2 OS=Arabidopsis thal... [more]
H2AZ_SHEEP7.769e-6190.20Histone H2A.Z OS=Ovis aries OX=9940 GN=H2AFZ PE=2 ... [more]
H2AZ_RAT7.769e-6190.20Histone H2A.Z OS=Rattus norvegicus OX=10116 GN=H2a... [more]
H2AZ_PONAB7.769e-6190.20Histone H2A.Z OS=Pongo abelii OX=9601 GN=H2AFZ PE=... [more]
H2AZ_ONCMY7.769e-6190.20Histone H2A.Z OS=Oncorhynchus mykiss OX=8022 GN=h2... [more]
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InterPro
Analysis Name: InterProScan: P. sativum Cameor genome v1a
Date Performed: 2019-09-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002119Histone H2APRINTSPR00620HISTONEH2Acoord: 55..70
score: 71.79
coord: 70..83
score: 84.63
coord: 111..129
score: 51.98
coord: 84..98
score: 65.78
coord: 25..47
score: 74.2
IPR002119Histone H2ASMARTSM00414h2a4coord: 14..134
e-value: 3.2E-71
score: 252.6
IPR002119Histone H2ACDDcd00074H2Acoord: 26..130
e-value: 1.14311E-57
score: 172.905
IPR009072Histone-foldGENE3D1.10.20.10coord: 12..134
e-value: 1.7E-53
score: 181.8
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 4..111
IPR032454Histone H2A, C-terminal domainPFAMPF16211Histone_H2A_Ccoord: 104..133
e-value: 8.7E-11
score: 41.4
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 14..103
e-value: 1.2E-19
score: 71.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..34
IPR032458Histone H2A conserved sitePROSITEPS00046HISTONE_H2Acoord: 33..39

Sequences
The following sequences are available for this feature:

mRNA sequence

>Psat6g029960.1_Ps_Cameor_v1a ID=Psat6g029960.1_Ps_Cameor_v1a; Name=Psat6g029960.1; organism=Pisum sativum; type=mRNA; length=2682bp
TAACAATTCCCTTTTACAAGTGTCAAAAACTATTTTACTTTTAAAAAAAA
AATCTAAAATGATCTACATTGGGTAGCAAATTTTTTCACTATCACTACTA
TTAATTTATTTTTTTTATATATTTTGAGAATAAAAAGAGACATAAGGGTA
ACATAGAAGCAAAATCTCAAAAGCCAAAACTCTCTCTCTCTCAAACGATC
GAAGCGAGAAACAATGTCGGGGAAAGGAGCGAAGGGTTTGACAACTGGTA
AAACCCCATCATCCCTCAAAGACAAGGACAAGAAGAAACCCACTTCTCGT
TCCTCCAGAGCTGGTCTTCAGGTTCATCTTCTTCATCCCTCTCTTTCCCT
TCATTATTTTCTGTTTATTACTTATCAAAATGTTCTAAGTTTTCACTTTT
TTCACTCTCATGTCATGGATCCACATCCTCGTCACATTTACATTATGATA
CATACCCAAAGTCTTGATTTTTATGTGTTTCCGTTTGTAAAAATTGTAAT
TTGAAAATACTAGGTTTTACTTTTTGTTGAGAGAAACTGTATTTTAGATT
TGGGGTTTTGTGTATGATATAGGTTGGAGTGAAAAGATTGATTTTTTACT
GAGATTGAAATTTGGATCCATTGTATTGTTGATGAGATTGTTGTTGTGTA
CCATGAAAGTATGTAATGATTTTCATTCTCATGTTGTTAGTTTTCACTGA
AGCATTTTGCTTGATAGAGCAGAGGTCCACCCCCTTTTATATGGTTTGTT
GGGAAGGGTTCACTCCACCCTTTTACTATAATTACCTTGTTTTGTATTAT
GCCGTATGAAGCGCGTGAGCGCATGTGTCACATTTGCGCTCACACGCATA
GCACGCCAATGTCGGCCCTGGTACATACACATTAGGAATAATTATTTGGA
AATATTAATAATTGAATATAACCATATGCGTCGGTTGGTGTGTTGATGCT
GGATACTGACACACTAACATGTGTTGTTACCGAACTCACCTTCGCTCTAA
AGTGTACTAGATGCTAGTTTATGGTTGTTTTCTTTTATCACCTTGGACTT
ATAACATGCTGGTTTATTCTTTTTACAGTGAATTCTCATTTTAAACAGTG
AATTCTCATGGGACTTGTCTAGGTTTTTCTAACATAAAAAGTCTTGTTAT
TCAATTTCTTGATTCTGTTCTCTGAACTCATGTCGAACCCATACTCCATG
TTTGAAGAATGTAGTCAACACGACCTAATTGAAAACAACCTTTTTGTTCT
GTGTTATGCCTATATCTGTGTTTATTCTACTGCATATTGGTTAACATTTT
CGCTAAAATTTGTAGTCTGACTGCAAATCATGTTGAACTTGTTAGGATTG
TTTTGATTTGTCTCTGATAATATCTCCTTACATACAGTTCCCTGTTGGTC
GTATCCATCGTCTTCTGAAGTCAAGGACAATGGCGCACGGAAGAGTCGGG
GCAACAGCTGCAGTTTATTCCGCTGCTATCCTGGAGTACTTAACCGCAGA
GGTGCTGGAGTTGGCTGGTAACGCAAGCAAGGATCTGAAGGTGAAGCGTA
TTACACCAAGACATCTACAGCTTGCTATCCGTGGAGACGAAGAACTCGAC
ACTCTCATCAAAGGAACAATTGCCGGAGGTGGTGTTATTCCTCATATCCA
CAAGTCTCTTATCAACAAGTCCTCAAAGGAATGAAGGTTCGCAATTTGCC
CAAATCAGCGCGGAAAAAGATGGATTATGATGTAAATTTGTTGATGATAA
CTTGATTTGTGGATAATTTTCTCGTTGTTTTGGTTTGATTTGGTTGAGTC
ACATTTAGATAATTTGATATTTTCTTTTATTTATATGGATTGTATTAACT
GACATGCACACTTTTGTGCCATGGTGCTGCATGTCTAGGATTTATGTTGG
ATTTTTTATCTTGTCAAACTTGTCTTTGCTTTTTCTTTGAACTGGTTGAC
AATGGAGTAATCGAAAGACTTTTGCTTCAGGTTTCGATATTTTTTTTCCA
AAGTTTCTCTACTATGACTATGTCTGCAAGCTTTAATGTGTAGTTGTGAT
TCAAATGAAAATTTTGTTGCGGCCATGATAGAGGCTTGATTCTTTTCTGA
AGGATATAAGCTTTGAGGCTGTTAAAAGCTCTTTGAACTGGATTACCAAT
TGACATCACAAGTATGGTTCTGGTTAGTTTTGTTAGTGAAAAATCAGTGT
GCGCAAGAATGTCGGATCTTGCAAGTCTGGTTGAGAAGGTTGCGCAAATC
TTCTCAACCAAGATTTGACATGGTTTGTGACCCGGCTTCTATAAAATCAA
AAACCTATATTTTAATGTCTCCCAATTGTAACTTGTTTAGCATTTTGCAA
TATTCTGTTTGGGATGGTTGATTTTTTCATCTTTTCCTTGAGAAATTTTC
TTAATTTTCCCCCATGTTTGCATATGCTTTGTGAAACTAAGCTTATCACA
CTTTTAATCAATCAGTGACTTATATTCCGATAAGCCACACATATCAGTAT
AGAATGTTATAATTATATTAGGTAATAGTCTAAAATTAGTTTAGAGATCA
CTTTTTTACTTTAATCTCGTTAGACATATATATATTTTAAAAAGTGTTCA
GACTATTACTTAAAGGACAATACAGGTTATCTATCTCTTCCTTTTTCGGT
TATTTCGTTTTTAGAATTTTTATAATATTTCT
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protein sequence of Psat6g029960.1_Ps_Cameor_v1a

>Psat6g029960.1_Ps_Cameor_v1a ID=Psat6g029960.1_Ps_Cameor_v1a; Name=Psat6g029960.1_Ps_Cameor_v1a; organism=Pisum sativum; type=polypeptide; length=135bp
MSGKGAKGLTTGKTPSSLKDKDKKKPTSRSSRAGLQFPVGRIHRLLKSRT
MAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAI
RGDEELDTLIKGTIAGGGVIPHIHKSLINKSSKE*
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mRNA from alignment at chr6LG2:23295828..23298509-

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Psat6g029960.1_Ps_Cameor_v1a ID=Psat6g029960.1_Ps_Cameor_v1a; Name=Psat6g029960.1; organism=Pisum sativum; type=mRNA; length=2682bp; location=Sequence derived from: chr6LG2:23295828..23298509- (Pisum sativum
TAACAATTCCCTTTTACAAGTGTCAAAAACTATTTTACTTTTAAAAAAAA
AATCTAAAATGATCTACATTGGGTAGCAAATTTTTTCACTATCACTACTA
TTAATTTATTTTTTTTATATATTTTGAGAATAAAAAGAGACATAAGGGTA
ACATAGAAGCAAAATCTCAAAAGCCAAAACTCTCTCTCTCTCAAACGATC
GAAGCGAGAAACAATGTCGGGGAAAGGAGCGAAGGGTTTGACAACTGGTA
AAACCCCATCATCCCTCAAAGACAAGGACAAGAAGAAACCCACTTCTCGT
TCCTCCAGAGCTGGTCTTCAGGTTCATCTTCTTCATCCCTCTCTTTCCCT
TCATTATTTTCTGTTTATTACTTATCAAAATGTTCTAAGTTTTCACTTTT
TTCACTCTCATGTCATGGATCCACATCCTCGTCACATTTACATTATGATA
CATACCCAAAGTCTTGATTTTTATGTGTTTCCGTTTGTAAAAATTGTAAT
TTGAAAATACTAGGTTTTACTTTTTGTTGAGAGAAACTGTATTTTAGATT
TGGGGTTTTGTGTATGATATAGGTTGGAGTGAAAAGATTGATTTTTTACT
GAGATTGAAATTTGGATCCATTGTATTGTTGATGAGATTGTTGTTGTGTA
CCATGAAAGTATGTAATGATTTTCATTCTCATGTTGTTAGTTTTCACTGA
AGCATTTTGCTTGATAGAGCAGAGGTCCACCCCCTTTTATATGGTTTGTT
GGGAAGGGTTCACTCCACCCTTTTACTATAATTACCTTGTTTTGTATTAT
GCCGTATGAAGCGCGTGAGCGCATGTGTCACATTTGCGCTCACACGCATA
GCACGCCAATGTCGGCCCTGGTACATACACATTAGGAATAATTATTTGGA
AATATTAATAATTGAATATAACCATATGCGTCGGTTGGTGTGTTGATGCT
GGATACTGACACACTAACATGTGTTGTTACCGAACTCACCTTCGCTCTAA
AGTGTACTAGATGCTAGTTTATGGTTGTTTTCTTTTATCACCTTGGACTT
ATAACATGCTGGTTTATTCTTTTTACAGTGAATTCTCATTTTAAACAGTG
AATTCTCATGGGACTTGTCTAGGTTTTTCTAACATAAAAAGTCTTGTTAT
TCAATTTCTTGATTCTGTTCTCTGAACTCATGTCGAACCCATACTCCATG
TTTGAAGAATGTAGTCAACACGACCTAATTGAAAACAACCTTTTTGTTCT
GTGTTATGCCTATATCTGTGTTTATTCTACTGCATATTGGTTAACATTTT
CGCTAAAATTTGTAGTCTGACTGCAAATCATGTTGAACTTGTTAGGATTG
TTTTGATTTGTCTCTGATAATATCTCCTTACATACAGTTCCCTGTTGGTC
GTATCCATCGTCTTCTGAAGTCAAGGACAATGGCGCACGGAAGAGTCGGG
GCAACAGCTGCAGTTTATTCCGCTGCTATCCTGGAGTACTTAACCGCAGA
GGTGCTGGAGTTGGCTGGTAACGCAAGCAAGGATCTGAAGGTGAAGCGTA
TTACACCAAGACATCTACAGCTTGCTATCCGTGGAGACGAAGAACTCGAC
ACTCTCATCAAAGGAACAATTGCCGGAGGTGGTGTTATTCCTCATATCCA
CAAGTCTCTTATCAACAAGTCCTCAAAGGAATGAAGGTTCGCAATTTGCC
CAAATCAGCGCGGAAAAAGATGGATTATGATGTAAATTTGTTGATGATAA
CTTGATTTGTGGATAATTTTCTCGTTGTTTTGGTTTGATTTGGTTGAGTC
ACATTTAGATAATTTGATATTTTCTTTTATTTATATGGATTGTATTAACT
GACATGCACACTTTTGTGCCATGGTGCTGCATGTCTAGGATTTATGTTGG
ATTTTTTATCTTGTCAAACTTGTCTTTGCTTTTTCTTTGAACTGGTTGAC
AATGGAGTAATCGAAAGACTTTTGCTTCAGGTTTCGATATTTTTTTTCCA
AAGTTTCTCTACTATGACTATGTCTGCAAGCTTTAATGTGTAGTTGTGAT
TCAAATGAAAATTTTGTTGCGGCCATGATAGAGGCTTGATTCTTTTCTGA
AGGATATAAGCTTTGAGGCTGTTAAAAGCTCTTTGAACTGGATTACCAAT
TGACATCACAAGTATGGTTCTGGTTAGTTTTGTTAGTGAAAAATCAGTGT
GCGCAAGAATGTCGGATCTTGCAAGTCTGGTTGAGAAGGTTGCGCAAATC
TTCTCAACCAAGATTTGACATGGTTTGTGACCCGGCTTCTATAAAATCAA
AAACCTATATTTTAATGTCTCCCAATTGTAACTTGTTTAGCATTTTGCAA
TATTCTGTTTGGGATGGTTGATTTTTTCATCTTTTCCTTGAGAAATTTTC
TTAATTTTCCCCCATGTTTGCATATGCTTTGTGAAACTAAGCTTATCACA
CTTTTAATCAATCAGTGACTTATATTCCGATAAGCCACACATATCAGTAT
AGAATGTTATAATTATATTAGGTAATAGTCTAAAATTAGTTTAGAGATCA
CTTTTTTACTTTAATCTCGTTAGACATATATATATTTTAAAAAGTGTTCA
GACTATTACTTAAAGGACAATACAGGTTATCTATCTCTTCCTTTTTCGGT
TATTTCGTTTTTAGAATTTTTATAATATTTCT
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Coding sequence (CDS) from alignment at chr6LG2:23295828..23298509-

>Psat6g029960.1_Ps_Cameor_v1a ID=Psat6g029960.1_Ps_Cameor_v1a; Name=Psat6g029960.1; organism=Pisum sativum; type=CDS; length=810bp; location=Sequence derived from: chr6LG2:23295828..23298509- (Pisum sativum
ATGTCGGGGAAAGGAGCGAAGGGTTTGACAACTGGTAAAACCCCATCATC
CCTCAAAGACAAGGACAAGAAGAAACCCACTTCTCGTTCCTCCAGAGCTG
GTCTTCAGATGTCGGGGAAAGGAGCGAAGGGTTTGACAACTGGTAAAACC
CCATCATCCCTCAAAGACAAGGACAAGAAGAAACCCACTTCTCGTTCCTC
CAGAGCTGGTCTTCAGTTCCCTGTTGGTCGTATCCATCGTCTTCTGAAGT
CAAGGACAATGGCGCACGGAAGAGTCGGGGCAACAGCTGCAGTTTATTCC
GCTGCTATCCTGGAGTACTTAACCGCAGAGGTGCTGGAGTTGGCTGGTAA
CGCAAGCAAGGATCTGAAGGTGAAGCGTATTACACCAAGACATCTACAGC
TTGCTATCCGTGGAGACGAAGAACTCGACACTCTCATCAAAGGAACAATT
GCCGGAGGTGGTGTTATTCCTCATATCCACAAGTCTCTTATCAACAAGTC
CTCAAAGGAATGATTCCCTGTTGGTCGTATCCATCGTCTTCTGAAGTCAA
GGACAATGGCGCACGGAAGAGTCGGGGCAACAGCTGCAGTTTATTCCGCT
GCTATCCTGGAGTACTTAACCGCAGAGGTGCTGGAGTTGGCTGGTAACGC
AAGCAAGGATCTGAAGGTGAAGCGTATTACACCAAGACATCTACAGCTTG
CTATCCGTGGAGACGAAGAACTCGACACTCTCATCAAAGGAACAATTGCC
GGAGGTGGTGTTATTCCTCATATCCACAAGTCTCTTATCAACAAGTCCTC
AAAGGAATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR002119Histone_H2A
IPR009072Histone-fold
IPR032454Histone_H2A_C
IPR007125Histone_H2A/H2B/H3
IPR032458Histone_H2A_CS
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0000786nucleosome
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0046982protein heterodimerization activity