Psat7g015960.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Psat7g015960.1 vs. DB:Swiss
Match: DREB3_ARATH (Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=DREB3 PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.818e-46 Identity = 107/187 (57.22%), Postives = 124/187 (66.31%), Query Frame = 1 Query: 202 QNKPKRPRDSNNSNHPVYRGVRMRAWGKWVSEIREPRKKNRIWLGTFATPEMAARAHDVAALAIKGNSAILNFPELAPSMPRPESKSPRDVQXXXXXXXXMEVPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEPSTPDELGEIVELPPLGTSFELPDPVNM----VFSDPVDGWPY 750 + K KR RDS HPVYRGVRMR WGKWVSEIREPRKK+RIWLGTF TPEMAARAHDVAAL+IKG +AILNFPELA S PRP S SPRD+Q AA+KAA ME ++++ S S + SS S L S + +ELGEIVELP LG S+++ D N+ VF D VD Y Sbjct: 36 EKKTKRGRDSGK--HPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGTAAILNFPELADSFPRPVSLSPRDIQTAALKAAHMEPTTSFSSSTSSSSSLSSTSSLESLVLVMDLSR-----------TESEELGEIVELPSLGASYDV-DSANLGNEFVFYDSVDYCLY 208
BLAST of Psat7g015960.1 vs. DB:Swiss
Match: TINY_ARATH (Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana OX=3702 GN=TINY PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.850e-44 Identity = 110/196 (56.12%), Postives = 132/196 (67.35%), Query Frame = 1 Query: 169 VSEIREIPDPVQNKPKRPRDSNNSNHPVYRGVRMRAWGKWVSEIREPRKKNRIWLGTFATPEMAARAHDVAALAIKGNSAILNFPELAPSMPRPESKSPRDVQXXXXXXXXMEVPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEPSTPDELGEIVELPPLGTSFELPDPVN--MVFSDPVDGWPY 750 S +R+ + + KP + ++ HPVYRGVR R WGKWVSEIREPRKK+RIWLGTF +PEMAARAHDVAAL+IKG SAILNFP+LA S PRP S SPRD+Q AA+KAA ME S +FSSSSS + S S SSSSL S + +ELGEIVELP LG+S++ + +FSD D WPY Sbjct: 12 ASAVRQENEEEKKKPVK----DSGKHPVYRGVRKRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGASAILNFPDLAGSFPRPSSLSPRDIQVAALKAAHMET-------------SQSFSSSSSLTFSSSQSSSSLESLVSSSATGSEELGEIVELPSLGSSYDGLTQLGNEFIFSDSADLWPY 190
BLAST of Psat7g015960.1 vs. DB:Swiss
Match: ERF43_ARATH (Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana OX=3702 GN=ERF043 PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 6.471e-41 Identity = 106/228 (46.49%), Postives = 142/228 (62.28%), Query Frame = 1 Query: 187 IPDPVQNKPKRPRDSNNSNHPVYRGVRMRAWGKWVSEIREPRKKNRIWLGTFATPEMAARAHDVAALAIKGNSAILNFPELAPSMPRPESKSPRDVQXXXXXXXXMEVPDXXXXX----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEPSTPDELGEIVELPPLGTSFELPDPVNMVFSDPVDGWPY----YSHSWDQISMHQDNSESISMILCGFEGSLWQH 846 + D +K K+ N+ PVYRGVRMR+WGKWVSEIREPRKK+RIWLGTF T EMA RAHDVAA++IKG SAILNFPEL+ +PRP S SPRDV+AAA KAA M+ + S++ + + SS S+ SSSS +V+S +E + D+L EIV+LP LGTS L + V D ++ Y S + +++ + +N S++ FE W+H Sbjct: 1 MADSSSDKEKKE----NNKQPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAMRAHDVAAMSIKGTSAILNFPELSKLLPRPVSLSPRDVRAAATKAALMDFDTTAFRSDTETSETTTSNKMSESSESNETVSFSSSSWSSVTSIEESTVSDDLDEIVKLPSLGTS--LNESNEFVIFDSLEDLVYMPRWLSGTEEEVFTYNNNDSSLNYSSV-FES--WKH 219
BLAST of Psat7g015960.1 vs. DB:Swiss
Match: ERF36_ARATH (Ethylene-responsive transcription factor ERF036 OS=Arabidopsis thaliana OX=3702 GN=ERF036 PE=2 SV=2) HSP 1 Score: 138.272 bits (347), Expect = 2.075e-38 Identity = 62/79 (78.48%), Postives = 68/79 (86.08%), Query Frame = 1 Query: 241 NHPVYRGVRMRAWGKWVSEIREPRKKNRIWLGTFATPEMAARAHDVAALAIKGNSAILNFPELAPSMPRPESKSPRDVQ 477 HPVYRGVRMR+WGKWVSEIR+PRKK RIWLGTF T +MAARAHDVAAL IKG+SA+LNFPELA PRP S SP D+Q Sbjct: 57 QHPVYRGVRMRSWGKWVSEIRQPRKKTRIWLGTFVTADMAARAHDVAALTIKGSSAVLNFPELASLFPRPASSSPHDIQ 135
BLAST of Psat7g015960.1 vs. DB:Swiss
Match: ERF34_ARATH (Ethylene-responsive transcription factor ERF034 OS=Arabidopsis thaliana OX=3702 GN=ERF034 PE=2 SV=2) HSP 1 Score: 137.887 bits (346), Expect = 1.050e-37 Identity = 62/88 (70.45%), Postives = 73/88 (82.95%), Query Frame = 1 Query: 214 KRPRDSNNSNHPVYRGVRMRAWGKWVSEIREPRKKNRIWLGTFATPEMAARAHDVAALAIKGNSAILNFPELAPSMPRPESKSPRDVQ 477 KR + + HP YRGVRMR+WGKWVSEIREPRKK+RIWLGT+ T EMAARAHDVAALAIKG +A LNFP+LA +PRP + SP+D+Q Sbjct: 87 KRRKTNGGDKHPTYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGTTAYLNFPKLAGELPRPVTNSPKDIQ 174
BLAST of Psat7g015960.1 vs. DB:Swiss
Match: ERF39_ARATH (Ethylene-responsive transcription factor ERF039 OS=Arabidopsis thaliana OX=3702 GN=ERF039 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 1.484e-37 Identity = 68/104 (65.38%), Postives = 77/104 (74.04%), Query Frame = 1 Query: 181 REIPDPVQNKPKRPRDSNN-----SNHPVYRGVRMRAWGKWVSEIREPRKKNRIWLGTFATPEMAARAHDVAALAIKGNSAILNFPELAPSMPRPESKSPRDVQ 477 R + PV K + + N S P +RGVRMR WGKWVSEIREPRKK+RIWLGTF+TPEMAARAHDVAALAIKG SA LNFPELA +PRP S P+D+Q Sbjct: 11 RNLRSPVPEKTGKSSKTKNEQKGVSKQPNFRGVRMRQWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALAIKGGSAHLNFPELAYHLPRPASADPKDIQ 114
BLAST of Psat7g015960.1 vs. DB:Swiss
Match: ERF38_ARATH (Ethylene-responsive transcription factor ERF038 OS=Arabidopsis thaliana OX=3702 GN=ERF038 PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 5.249e-37 Identity = 62/80 (77.50%), Postives = 69/80 (86.25%), Query Frame = 1 Query: 238 SNHPVYRGVRMRAWGKWVSEIREPRKKNRIWLGTFATPEMAARAHDVAALAIKGNSAILNFPELAPSMPRPESKSPRDVQ 477 S HP +RGVRMR WGKWVSEIREP+KK+RIWLGTF+T EMAARAHDVAALAIKG SA LNFPELA +PRP S P+D+Q Sbjct: 40 SKHPNFRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTAEMAARAHDVAALAIKGGSAHLNFPELAYHLPRPASADPKDIQ 119
BLAST of Psat7g015960.1 vs. DB:Swiss
Match: ERF35_ARATH (Ethylene-responsive transcription factor ERF035 OS=Arabidopsis thaliana OX=3702 GN=ERF035 PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 4.925e-36 Identity = 62/82 (75.61%), Postives = 70/82 (85.37%), Query Frame = 1 Query: 232 NNSNHPVYRGVRMRAWGKWVSEIREPRKKNRIWLGTFATPEMAARAHDVAALAIKGNSAILNFPELAPSMPRPESKSPRDVQ 477 +N N YRGVRMR+WGKWVSEIREPRKK+RIWLGT+ T EMAARAHDVAALAIKGNS LNFPEL+ +PRP S SP+D+Q Sbjct: 64 DNKNPTSYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGNSGFLNFPELSGLLPRPVSCSPKDIQ 145
BLAST of Psat7g015960.1 vs. DB:Swiss
Match: ERF42_ARATH (Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana OX=3702 GN=ERF042 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 1.129e-35 Identity = 61/76 (80.26%), Postives = 68/76 (89.47%), Query Frame = 1 Query: 250 VYRGVRMRAWGKWVSEIREPRKKNRIWLGTFATPEMAARAHDVAALAIKGNSAILNFPELAPSMPRPESKSPRDVQ 477 VYRG RMR+WGKWVSEIREPRKK+RIWLGTF T EMAARAHDVAAL+IKG+SAILNFPELA +PRP S S +D+Q Sbjct: 25 VYRGARMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHDVAALSIKGSSAILNFPELADFLPRPVSLSQQDIQ 100
BLAST of Psat7g015960.1 vs. DB:Swiss
Match: ERF37_ARATH (Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana OX=3702 GN=ERF037 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.055e-33 Identity = 96/166 (57.83%), Postives = 114/166 (68.67%), Query Frame = 1 Query: 205 NKPKRPRDSNNSNHPVYRGVRMRAWGKWVSEIREPRKKNRIWLGTFATPEMAARAHDVAALAIKGNSAILNFPELAPSMPRPESKSPRDVQXXXXXXXXMEVPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDE--PSTPDELGEIVELPPLGTSFE 696 N KR R + P YRGVRMR WGKWVSEIREPRKK+RIWLGTF+TPEMAARAHD AAL IKG SA+LNFPELA +PRP S SPRDVQAAA AAAM+ ++ S + + + S S S+ +S ++S S E ST +EL EIVELP L TS++ Sbjct: 32 NTKKRVR-----SDPGYRGVRMRTWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDAAALTIKGTSAVLNFPELATYLPRPASSSPRDVQAAAAVAAAMDFSPSSSSLVVSDPTTVIAPAETQLSSSSYSTCTSSSLSPSSEEAASTAEELSEIVELPSLETSYD 192 The following BLAST results are available for this feature:
BLAST of Psat7g015960.1 vs. DB:Swiss
Analysis Date: 2019-09-12 (BLAST: P. sativum Cameor genome v1a vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: P. sativum Cameor genome v1a
Date Performed: 2019-09-12
Sequences
The
following sequences are available for this feature:
mRNA sequence >Psat7g015960.1_Ps_Cameor_v1a ID=Psat7g015960.1_Ps_Cameor_v1a; Name=Psat7g015960.1; organism=Pisum sativum; type=mRNA; length=1653bpback to top protein sequence of Psat7g015960.1_Ps_Cameor_v1a >Psat7g015960.1_Ps_Cameor_v1a ID=Psat7g015960.1_Ps_Cameor_v1a; Name=Psat7g015960.1_Ps_Cameor_v1a; organism=Pisum sativum; type=polypeptide; length=283bpback to top mRNA from alignment at chr7LG7:24714963..24716615+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Psat7g015960.1_Ps_Cameor_v1a ID=Psat7g015960.1_Ps_Cameor_v1a; Name=Psat7g015960.1; organism=Pisum sativum; type=mRNA; length=1653bp; location=Sequence derived from: chr7LG7:24714963..24716615+ (Pisum sativumback to top Coding sequence (CDS) from alignment at chr7LG7:24714963..24716615+ >Psat7g015960.1_Ps_Cameor_v1a ID=Psat7g015960.1_Ps_Cameor_v1a; Name=Psat7g015960.1; organism=Pisum sativum; type=CDS; length=1698bp; location=Sequence derived from: chr7LG7:24714963..24716615+ (Pisum sativumback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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