rna-KK1_031787
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of rna-KK1_031787 vs. DB:Swiss
Match: SBIR1_ARATH (Leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1 OS=Arabidopsis thaliana OX=3702 GN=SOBIR1 PE=1 SV=1) HSP 1 Score: 424.476 bits (1090), Expect = 1.161e-145 Identity = 193/241 (80.08%), Postives = 220/241 (91.29%), Query Frame = 1 Query: 1 MRQIRSEINTVGQIRHRNLLPLLAHVSRPDCHYLVYEFMKNGSLQDTLSKVERGEAELDWLQRHKIALGVASGLEYLHLNHSPRIIHRDLKPANILLDDDMEARIADFGLAKAMPDYKTHITTSNVAGTVGYIAPEYHQILKFTDKCDIYSFGVILGVLVIGKLPSDEFFQHTDEMSLVKWMKKVLSSENPKEAIDAKLLENGFEEQMLLVLKIACFCTMDDPKERPNSKDVRCMLSQITH 723 MRQIRSEINTVG IRHRNLLPLLAHVSRP+CHYLVYE+M+ GSLQD L+ V+ G EL W RHKIALG+A+GLEYLH++H+PRIIHRDLKPAN+LLDDDMEARI+DFGLAKAMPD THITTS+VAGTVGYIAPE++Q KFTDKCDIYSFGVILG+LVIGKLPSDEFFQHTDEMSL+KWM+ +++SENP AID KL++ GF+EQMLLVLKIAC+CT+DDPK+RPNSKDVR MLSQI H Sbjct: 401 MRQIRSEINTVGHIRHRNLLPLLAHVSRPECHYLVYEYMEKGSLQDILTDVQAGNQELMWPARHKIALGIAAGLEYLHMDHNPRIIHRDLKPANVLLDDDMEARISDFGLAKAMPDAVTHITTSHVAGTVGYIAPEFYQTHKFTDKCDIYSFGVILGILVIGKLPSDEFFQHTDEMSLIKWMRNIITSENPSLAIDPKLMDQGFDEQMLLVLKIACYCTLDDPKQRPNSKDVRTMLSQIKH 641
BLAST of rna-KK1_031787 vs. DB:Swiss
Match: CRN_ARATH (Inactive leucine-rich repeat receptor-like protein kinase CORYNE OS=Arabidopsis thaliana OX=3702 GN=CRN PE=1 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 2.371e-57 Identity = 98/240 (40.83%), Postives = 150/240 (62.50%), Query Frame = 1 Query: 4 RQIRSEINTVGQIRHRNLLPLLAHVSRPDCHYLVYEFMKNGSLQDTLSKVERGEAELDWLQRHKIALGVASGLEYLHLNHSPRIIHRDLKPANILLDDDMEARIADFGLAKAMPDYKTHITTSNVAGTVGYIAPEYHQILKFTDKCDIYSFGVILGVLVIGKLPSDEFFQHTDE-MSLVKWMKKVLSSENPKEAIDAKLLENGFEE-QMLLVLKIACFCTMDDPKERPNSKDVRCMLSQI 717 R+++ E+ + +RHRNL+ L A+V D LVY++M NGSL+D ++KV E EL W R ++A+G+ GL+YLH + +I+H +LKP N++LD + E R+AD GLAK MP T ++ Y APE Q ++TDK DI+SFG+ILGVL+ G+ P+ F + + SL +W+K + S +EA+D +L EE +ML+ L+I C D P +RP+S ++ ML+Q+ Sbjct: 167 RRLQKELELLAGLRHRNLMSLRAYVRESDEFSLVYDYMPNGSLEDVMNKVRTKEVELGWEIRLRVAVGIVKGLQYLHFSCETQILHYNLKPTNVMLDSEFEPRLADCGLAKIMPSSHTAVSC--------YSAPESSQSNRYTDKSDIFSFGMILGVLLTGRDPTHPFCEESASGGSLGQWLKHLQQSGEAREALDKTILGEEVEEDEMLMALRITIICLSDFPADRPSSDELVHMLTQL 398
BLAST of rna-KK1_031787 vs. DB:Swiss
Match: PXL1_ARATH (Leucine-rich repeat receptor-like protein kinase PXL1 OS=Arabidopsis thaliana OX=3702 GN=PXL1 PE=1 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 1.498e-55 Identity = 110/238 (46.22%), Postives = 151/238 (63.45%), Query Frame = 1 Query: 10 IRSEINTVGQIRHRNLLPLLAHVSRPDCHYLVYEFMKNGSLQDTLSKVERGEAELDWLQRHKIALGVASGLEYLHLNHSPRIIHRDLKPANILLDDDMEARIADFGLAKAMPDYKTHITTSNVAGTVGYIAPEYHQILKFTDKCDIYSFGVILGVLVIGKLPSDEFFQHTDEMSLVKWM-KKVLSSENPKEAIDAKLLENG--FEEQMLLVLKIACFCTMDDPKERPNSKDVRCMLSQ 714 I E+N +G +RHRN++ +L +V +VYE+M NG+L L + DWL R+ +A+GV GL YLH + P IIHRD+K NILLD ++EARIADFGLAK M + T S VAG+ GYIAPEY LK +K DIYS GV+L LV GK+P D F+ D + +V+W+ +KV +E+ +E IDA + + E+MLL L+IA CT PK+RP+ +DV ML++ Sbjct: 769 ILREVNLLGGLRHRNIVKILGYVHNEREVMMVYEYMPNGNLGTALHSKDEKFLLRDWLSRYNVAVGVVQGLNYLHNDCYPPIIHRDIKSNNILLDSNLEARIADFGLAKMM--LHKNETVSMVAGSYGYIAPEYGYTLKIDEKSDIYSLGVVLLELVTGKMPIDPSFE--DSIDVVEWIRRKVKKNESLEEVIDASIAGDCKHVIEEMLLALRIALLCTAKLPKDRPSIRDVITMLAE 1002
BLAST of rna-KK1_031787 vs. DB:Swiss
Match: BRL2_ORYSJ (Brassinosteroid LRR receptor kinase BRL2 OS=Oryza sativa subsp. japonica OX=39947 GN=BRL2 PE=2 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 1.728e-55 Identity = 101/241 (41.91%), Postives = 150/241 (62.24%), Query Frame = 1 Query: 4 RQIRSEINTVGQIRHRNLLPLLAHVSRPDCHYLVYEFMKNGSLQDTL--SKVERGEAELDWLQRHKIALGVASGLEYLHLNHSPRIIHRDLKPANILLDDDMEARIADFGLAKAMPDYKTHITTSNVAGTVGYIAPEYHQILKFTDKCDIYSFGVILGVLVIGKLPSDEFFQHTDEMSLVKWMKKVLSSENPKEAIDAKLLENGFE-EQMLLVLKIACFCTMDDPKERPNSKDVRCMLSQI 717 R+ +E+ T+G+I+H+NL+PLL + + LVYEFM +GSL+DTL + W QR K+A G A GL +LH N P IIHRD+K +N+LLD DMEAR+ADFG+A+ + TH++ S +AGT GY+ PEY+Q + T K D+YSFGV+L L+ G+ P+D+ + +LV W+K + KE +D +L+ G + ++M + +A C D P +RPN V ML ++ Sbjct: 863 REFMAEMETLGKIKHKNLVPLLGYCKIGEERLLVYEFMSHGSLEDTLHGDGGRSASPAMSWEQRKKVARGAARGLCFLHYNCIPHIIHRDMKSSNVLLDGDMEARVADFGMARLISALDTHLSVSTLAGTPGYVPPEYYQSFRCTVKGDVYSFGVVLLELLTGRRPTDK--DDFGDTNLVGWVKMKVGDGAGKEVLDPELVVEGADADEMARFMDMALQCVDDFPSKRPNMLQVVAMLREL 1101
BLAST of rna-KK1_031787 vs. DB:Swiss
Match: BRL1_ORYSJ (Brassinosteroid LRR receptor kinase BRL1 OS=Oryza sativa subsp. japonica OX=39947 GN=BRL1 PE=2 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 2.128e-55 Identity = 99/239 (41.42%), Postives = 146/239 (61.09%), Query Frame = 1 Query: 4 RQIRSEINTVGQIRHRNLLPLLAHVSRPDCHYLVYEFMKNGSLQDTLSKVERGEAELDWLQRHKIALGVASGLEYLHLNHSPRIIHRDLKPANILLDDDMEARIADFGLAKAMPDYKTHITTSNVAGTVGYIAPEYHQILKFTDKCDIYSFGVILGVLVIGKLPSDEFFQHTDEMSLVKWMKKVLSSENPKEAIDAKLLE-NGFEEQMLLVLKIACFCTMDDPKERPNSKDVRCMLSQI 717 R+ +E+ T+G+I+HRNL+PLL + D LVYE+MK+GSL L + +LDW R KIA+G A GL +LH + P IIHRD+K +N+LLD++++AR++DFG+A+ M TH++ S +AGT GY+ PEY+Q + T K D+YS+GV+L L+ GK P D + +LV W+K+++ E D L + E ++ LKIAC C D P RP V M ++ Sbjct: 951 REFTAEMETIGKIKHRNLVPLLGYCKIGDERLLVYEYMKHGSLDVVLHDKAKASVKLDWSARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDNNLDARVSDFGMARLMNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVVLLELLSGKKPIDP--TEFGDNNLVGWVKQMVKENRSSEIFDPTLTDRKSGEAELYQYLKIACECLDDRPNRRPTMIQVMAMFKEL 1187
BLAST of rna-KK1_031787 vs. DB:Swiss
Match: Y1723_ARATH (Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 OS=Arabidopsis thaliana OX=3702 GN=At1g17230 PE=1 SV=2) HSP 1 Score: 192.586 bits (488), Expect = 7.411e-55 Identity = 106/237 (44.73%), Postives = 148/237 (62.45%), Query Frame = 1 Query: 13 RSEINTVGQIRHRNLLPLLAHVSRPDCHYLVYEFMKNGSLQDTLSKVERGEAELDWLQRHKIALGVASGLEYLHLNHSPRIIHRDLKPANILLDDDMEARIADFGLAKAMPDYKTHITTSNVAGTVGYIAPEYHQILKFTDKCDIYSFGVILGVLVIGKLPSDEFFQHTDEMSLVKWMKKVLSSENPK-EAIDAKLLENGFEE--QMLLVLKIACFCTMDDPKERPNSKDVRCMLSQ 714 R+EI+T+G+IRHRN++ L + + L+YE+M GSL + L + E+ LDW R++IALG A GL YLH + P+I+HRD+K NILLD+ +A + DFGLAK + D + S VAG+ GYIAPEY +K T+KCDIYSFGV+L L+ GK P Q D LV W+++ + + P E DA+L N +M LVLKIA FCT + P RP ++V M+++ Sbjct: 843 RAEISTLGKIRHRNIVKLYGFCYHQNSNLLLYEYMSKGSLGEQLQRGEK-NCLLDWNARYRIALGAAEGLCYLHHDCRPQIVHRDIKSNNILLDERFQAHVGDFGLAKLI-DLSYSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELITGKPPVQPLEQGGD---LVNWVRRSIRNMIPTIEMFDARLDTNDKRTVHEMSLVLKIALFCTSNSPASRPTMREVVAMITE 1074
BLAST of rna-KK1_031787 vs. DB:Swiss
Match: Y1853_ARATH (Receptor-like serine/threonine-protein kinase At1g78530 OS=Arabidopsis thaliana OX=3702 GN=At1g78530 PE=2 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.065e-54 Identity = 103/241 (42.74%), Postives = 143/241 (59.34%), Query Frame = 1 Query: 4 RQIRSEINTVGQIRHRNLLPLLAHVSRPDCHYLVYEFMKNGSLQDTLSKVERGEAELDWLQRHKIALGVASGLEYLHLNHSPRIIHRDLKPANILLDDDMEARIADFGLAKAMPDYKTHITTSNVAGTVGYIAPEYHQILKFTDKCDIYSFGVILGVLVIGKLPS-DEFFQHTDEMSLVKWMKKVLSSENPKEAIDAKLLENGFE--EQMLLVLKIACFCTMDDPKERPNSKDVRCMLSQI 717 R E+ + I+HRN++ L + + P + L+YE M NGSL L G LDW R++IA+G A G+ YLH + P IIHRD+K +NILLD +MEAR++DFGLA M KTH++T VAGT GY+APEY K T K D+YSFGV+L L+ G+ P+ DEFF+ + LV W+K V+ + + ID +L + + E+M V IA C +P RP +V +L I Sbjct: 114 RGFHRELEAMADIKHRNIVTLHGYFTSPHYNLLIYELMPNGSLDSFL----HGRKALDWASRYRIAVGAARGISYLHHDCIPHIIHRDIKSSNILLDHNMEARVSDFGLATLMEPDKTHVSTF-VAGTFGYLAPEYFDTGKATMKGDVYSFGVVLLELLTGRKPTDDEFFE--EGTKLVTWVKGVVRDQREEVVIDNRLRGSSVQENEEMNDVFGIAMMCLEPEPAIRPAMTEVVKLLEYI 347
BLAST of rna-KK1_031787 vs. DB:Swiss
Match: BRI1_ARATH (Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana OX=3702 GN=BRI1 PE=1 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 1.276e-54 Identity = 100/240 (41.67%), Postives = 150/240 (62.50%), Query Frame = 1 Query: 4 RQIRSEINTVGQIRHRNLLPLLAHVSRPDCHYLVYEFMKNGSLQDTLSKVERGEAELDWLQRHKIALGVASGLEYLHLNHSPRIIHRDLKPANILLDDDMEARIADFGLAKAMPDYKTHITTSNVAGTVGYIAPEYHQILKFTDKCDIYSFGVILGVLVIGKLPSDEFFQHTDEMSLVKWMKKVLSSENPKEAIDAKLLEN--GFEEQMLLVLKIACFCTMDDPKERPNSKDVRCMLSQI 717 R+ +E+ T+G+I+HRNL+PLL + D LVYEFMK GSL+D L ++ +L+W R KIA+G A GL +LH N SP IIHRD+K +N+LLD+++EAR++DFG+A+ M TH++ S +AGT GY+ PEY+Q + + K D+YS+GV+L L+ GK P+D + +LV W+K+ + + D +L++ E ++L LK+A C D RP V M +I Sbjct: 922 REFMAEMETIGKIKHRNLVPLLGYCKVGDERLLVYEFMKYGSLEDVLHDPKKAGVKLNWSTRRKIAIGSARGLAFLHHNCSPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDS--PDFGDNNLVGWVKQH-AKLRISDVFDPELMKEDPALEIELLQHLKVAVACLDDRAWRRPTMVQVMAMFKEI 1158
BLAST of rna-KK1_031787 vs. DB:Swiss
Match: BRI1_ORYSJ (Brassinosteroid LRR receptor kinase BRI1 OS=Oryza sativa subsp. japonica OX=39947 GN=BRI1 PE=1 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 1.286e-54 Identity = 100/240 (41.67%), Postives = 151/240 (62.92%), Query Frame = 1 Query: 4 RQIRSEINTVGQIRHRNLLPLLAHVSRPDCHYLVYEFMKNGSLQDTLSKVERGEAELDWLQRHKIALGVASGLEYLHLNHSPRIIHRDLKPANILLDDDMEARIADFGLAKAMPDYKTHITTSNVAGTVGYIAPEYHQILKFTDKCDIYSFGVILGVLVIGKLPSDEFFQHTDEMSLVKWMKKVLSSENPKEAIDAKLLEN--GFEEQMLLVLKIACFCTMDDPKERPNSKDVRCMLSQI 717 R+ +E+ T+G+I+HRNL+PLL + + LVY++MK GSL+D L ++ +L+W R KIA+G A GL +LH N P IIHRD+K +N+L+D+ +EAR++DFG+A+ M TH++ S +AGT GY+ PEY+Q + T K D+YS+GV+L L+ GK P+D ++ +LV W+K+ + + D +LL+ E ++L LKIAC C D P RP V M +I Sbjct: 846 REFTAEMETIGKIKHRNLVPLLGYCKAGEERLLVYDYMKFGSLEDVLHDRKKIGKKLNWEARRKIAVGAARGLAFLHHNCIPHIIHRDMKSSNVLIDEQLEARVSDFGMARLMSVVDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVVLLELLTGKPPTDS-ADFGEDNNLVGWVKQH-TKLKITDVFDPELLKEDPSVELELLEHLKIACACLDDRPSRRPTMLKVMAMFKEI 1083
BLAST of rna-KK1_031787 vs. DB:Swiss
Match: CEPR1_ARATH (Receptor protein-tyrosine kinase CEPR1 OS=Arabidopsis thaliana OX=3702 GN=CEPR1 PE=1 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 1.374e-54 Identity = 103/240 (42.92%), Postives = 149/240 (62.08%), Query Frame = 1 Query: 4 RQIRSEINTVGQIRHRNLLPLLAHVSRPDCHYLVYEFMKNGSLQDTLSKVERGEAELDWLQRHKIALGVASGLEYLHLNHSPRIIHRDLKPANILLDDDMEARIADFGLAKAMPDYKTHITTSNVAGTVGYIAPEYHQILKFTDKCDIYSFGVILGVLVIGKLPSDEFFQHTDEMSLVKWMK-KVLSSENPKEAIDAKLLENGFEEQMLLVLKIACFCTMDDPKERPNSKDVRCMLSQIT 720 +++++E+ T+G IRH+N++ L ++ S DC LVYE+M NG+L D L K G L+W RH+IA+GVA GL YLH + SP IIHRD+K NILLD + + ++ADFG+AK + TT+ +AGT GY+APEY K T KCD+YSFGV+L L+ GK P D F + ++V W+ K+ + E E +D +L E+ + M+ L++A CT P RP +V +L T Sbjct: 704 KELKTEVETLGSIRHKNIVKLFSYFSSLDCSLLVYEYMPNGNLWDALHK---GFVHLEWRTRHQIAVGVAQGLAYLHHDLSPPIIHRDIKSTNILLDVNYQPKVADFGIAKVLQARGKDSTTTVMAGTYGYLAPEYAYSSKATIKCDVYSFGVVLMELITGKKPVDSCFG--ENKNIVNWVSTKIDTKEGLIETLDKRLSESS-KADMINALRVAIRCTSRTPTIRPTMNEVVQLLIDAT 937 The following BLAST results are available for this feature:
BLAST of rna-KK1_031787 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: C. cajan Asha genome v1.0 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: Cajanus cajan Asha genome v1.0
Date Performed: 2019-09-17
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-KK1_031787_Cc_Asha_v1.0 ID=rna-KK1_031787_Cc_Asha_v1.0; Name=rna-KK1_031787; organism=Cajanus cajan; type=mRNA; length=726bpback to top protein sequence of rna-KK1_031787_Cc_Asha_v1.0 >rna-KK1_031787_Cc_Asha_v1.0 ID=rna-KK1_031787_Cc_Asha_v1.0; Name=rna-KK1_031787_Cc_Asha_v1.0; organism=Cajanus cajan; type=polypeptide; length=241bpback to top mRNA from alignment at Scaffold125850-KQ483552.1:353032..353757- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.>rna-KK1_031787_Cc_Asha_v1.0 ID=rna-KK1_031787_Cc_Asha_v1.0; Name=rna-KK1_031787; organism=Cajanus cajan; type=mRNA; length=726bp; location=Sequence derived from: Scaffold125850-KQ483552.1:353032..353757- (Cajanus cajanback to top Coding sequence (CDS) from alignment at Scaffold125850-KQ483552.1:353032..353757- >rna-KK1_031787_Cc_Asha_v1.0 ID=rna-KK1_031787_Cc_Asha_v1.0; Name=rna-KK1_031787; organism=Cajanus cajan; type=CDS; length=1452bp; location=Sequence derived from: Scaffold125850-KQ483552.1:353032..353757- (Cajanus cajanback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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