rna-KK1_026291
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of rna-KK1_026291 vs. DB:Swiss
Match: LYK3_ARATH (LysM domain receptor-like kinase 3 OS=Arabidopsis thaliana OX=3702 GN=LYK3 PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.983e-40 Identity = 104/335 (31.04%), Postives = 170/335 (50.75%), Query Frame = 1 Query: 244 ENPHIYQFSEICAATNNFLAKR---HSSSTPCWRCTLRGADVIVFQRKFRRML--QTSQLQNLLAIVCRSHHVSIIKLLGATVSGDHIYLVYDFVHGASLSDCLRSKNNAHFTVLSTWMSRMQVAADLAHGLDYIHNKTGLNINFVHSHIKTSGIIVTEPSFNARVCHFGTAQLC---GEIDLQTDKLSEIREETPSPARSKQFEGVRGYMAPEFQVSGVATQKSDVYAFGVVILELLSGEEPLKFRFDEKTRGFVKTSVIEAAMAAVDGGE-----GRLRNWVDRRLNDSFPVDVVEKLTRVALECVHVDPDKRPNMGRVAGKISKFYLTSRKW 1209 E P ++ + EI AAT+ F H + + LR +V V +RM +T + + ++C+ HH ++++L+G + D +++VY++V L L + T LS W+ R Q+A D A GL+YIH T ++VH IKTS I++ E +F A++ FG A+L GE ++ K+ G GY+APE+ G+AT KSD+YAFGVV+ E++SG E + T+ + + +A + L+ +VD + D +P D + K+ +A +CV DP RPNM +V +S+ L+S +W Sbjct: 324 EKPMVFTYEEIRAATDEFSDSNLLGHGNYGSVYFGLLREQEVAV-----KRMTATKTKEFAAEMKVLCKVHHSNLVELIGYAATVDELFVVYEYVRKGMLKSHLHDPQSKGNTPLS-WIMRNQIALDAARGLEYIHEHT--KTHYVHRDIKTSNILLDE-AFRAKISDFGLAKLVEKTGEGEISVTKVV----------------GTYGYLAPEYLSDGLATSKSDIYAFGVVLFEIISGREAVIRTEAIGTKNPERRPLASIMLAVLKNSPDSMNMSSLKEFVDPNMMDLYPHDCLFKIATLAKQCVDDDPILRPNMKQVVISLSQILLSSIEW 633
BLAST of rna-KK1_026291 vs. DB:Swiss
Match: LYK5_ARATH (Protein LYK5 OS=Arabidopsis thaliana OX=3702 GN=LYK5 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 1.528e-35 Identity = 93/327 (28.44%), Postives = 177/327 (54.13%), Query Frame = 1 Query: 244 ENPHIYQFSEICAATNNFLAKRHSSSTPCWRCTLRGADVIVFQRKFRRMLQTSQLQNLLAIVCRSHHVSIIKLLGATVSGDHIYLVYDFVHGASLSDCLRSKNNAHFTVLSTWMSRMQVAADLAHGLDYIHNKTGLNINFVHSHIKTSGIIVTEPSFNARVCHFGTAQLC--GEIDLQTDKLSEIREETPSPARSKQFEGVRGYMAPEFQVSGVATQKSDVYAFGVVILELLSGEEPLKFRFDEKTRGFVKTSVIEAAMAAVDGGEG---RLRNWVDRRLNDSFPVDVVEKLTRVALECVHVDPDKRPNMGRVAGKISKFYLTSRKW 1209 E+ +Y+F+++ +AT+NF + + +R T+ G D V + + + +S++ NLL + +H +II+L G + YLV+++ S+SD L S T W R+++A D+A LDY+HN + +H +++++ I++ + +F A++ +FG A++ G++DLQ ++ EG +GY+APE+ +GV T K DV+AFGV +LELLSG E + ++ + ++ + +V GGE +L+ ++D L + +P+++ + ++A CV D + RP++ +V +S +S W Sbjct: 355 ESLTLYRFNDLQSATSNF-SDENRIKGSVYRATINGDDAAV--KVIKGDVSSSEI-NLLK---KLNHSNIIRLSGFCIREGTSYLVFEYSENGSISDWLHSSGKKSLT----WKQRVEIARDVAEALDYLHNY--ITPPHIHKNLESTNILL-DSNFRAKIANFGVARILDEGDLDLQL---------------TRHVEGTQGYLAPEYVENGVITSKLDVFAFGVAVLELLSGREAVTIHKKKEGE--EEVEMLCKVINSVLGGENVREKLKEFMDPSLGNEYPLELAYTMAQLAKSCVATDLNSRPSVTQVLTTLSMIVSSSIDW 650
BLAST of rna-KK1_026291 vs. DB:Swiss
Match: CERK1_ORYSJ (Chitin elicitor receptor kinase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CERK1 PE=1 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 9.005e-32 Identity = 97/322 (30.12%), Postives = 157/322 (48.76%), Query Frame = 1 Query: 259 YQFSEICAATNNFLAKR---HSSSTPCWRCTLRGADVIVFQRKFRRMLQTSQLQNLLAIVCRSHHVSIIKLLGATVSGDHIYLVYDFVHGASLSDCLRSKNNAHFTVLSTWMSRMQVAADLAHGLDYIHNKTGLNINFVHSHIKTSGIIVTEPSFNARVCHFGTAQLCGEIDLQTDKLSEIREETPSPARSKQFEGVRGYMAPEFQVSGVATQKSDVYAFGVVILELLSGEEPL--KFRFDEKTRGFVKTSVIEAAMAAVDGGEGRLRNWVDRRLNDSFPVDVVEKLTRVALECVHVDPDKRPNMGRVAGKISKFYLTSRKW 1209 + + E+ AT F + LRG + K M T + L ++ HH+++++L+G + ++LVY+F+ +LS LR + LS W +R+Q+A D A GL+YIH T ++H IK++ I++ + ++ A+V FG KL+E+ T P ++ G GYM PE+ G + K DVYAFGVV+ EL+S +E + ++G V + E A+ + D EG LR +D +L + +P+D + KLT++A C DP RP+M V + TS W Sbjct: 312 FSYEELSNATQGFSIGNKIGQGGFGAVYYAELRGEKAAI---KKMDMQATHEFLAELKVLTHVHHLNLVRLIGYCIE-SSLFLVYEFIENGNLSQHLRGMG---YEPLS-WAARIQIALDSARGLEYIHEHT--VPVYIHRDIKSANILI-DKNYRAKVADFGLT-----------KLTEVGG-TSMPTGTRVV-GTFGYMPPEYARYGDVSPKVDVYAFGVVLYELISAKEAIVRSTESSSDSKGLVY--LFEEALNSPDPKEG-LRTLIDPKLGEDYPIDSILKLTQLAKVCTQEDPKLRPSMRSVVVALMTLSSTSEFW 606
BLAST of rna-KK1_026291 vs. DB:Swiss
Match: CERK1_ARATH (Chitin elicitor receptor kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CERK1 PE=1 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 5.256e-30 Identity = 98/323 (30.34%), Postives = 147/323 (45.51%), Query Frame = 1 Query: 259 YQFSEICAATNNF---LAKRHSSSTPCWRCTLRGADVIVFQRKFRRMLQTSQLQNLLAIVCRSHHVSIIKLLGATVSGDHIYLVYDFVHGASLSDCLRSKNNAHFTVLSTWMSRMQVAADLAHGLDYIHNKTGLNINFVHSHIKTSGIIVTEPSFNARVCHFGTAQLCGEIDLQTDKLSEIREETPSPARSKQFEGVRGYMAPEFQVSGVATQKSDVYAFGVVILELLSGEEPLKFRFDEKT---RGFVKTSVIEAAMAAVDGGEGRLRNWVDRRLNDSFPVDVVEKLTRVALECVHVDPDKRPNMGRVAGKISKFYLTSRKW 1209 + E+ AT+NF + LRG + K M + Q L ++ R HHV++++L+G V G ++LVY++V +L L W R+Q+A D A GL+YIH T +VH IK++ I++ + F A+V FG L+++ E S R G GYMAPE V G + K DVYAFGVV+ EL+S + + + E RG V V E + D E LR +D RL DS+P D V K+ + C + RP+M + +S + ++ W Sbjct: 310 FSLEELAKATDNFNLSFKIGQGGFGAVYYAELRGEKAAI---KKMDMEASKQFLAELKVLTRVHHVNLVRLIGYCVEGS-LFLVYEYVENGNLGQHLHGSGREPLP----WTKRVQIALDSARGLEYIHEHT--VPVYVHRDIKSANILIDQ-KFRAKVADFG--------------LTKLTEVGGSATRGAM--GTFGYMAPE-TVYGEVSAKVDVYAFGVVLYELISAKGAV-VKMTEAVGEFRGLV--GVFEESFKETDKEEA-LRKIIDPRLGDSYPFDSVYKMAELGKACTQENAQLRPSMRYIVVALSTLFSSTGNW 600
BLAST of rna-KK1_026291 vs. DB:Swiss
Match: WAK5_ARATH (Wall-associated receptor kinase 5 OS=Arabidopsis thaliana OX=3702 GN=WAK5 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 1.932e-29 Identity = 80/276 (28.99%), Postives = 148/276 (53.62%), Query Frame = 1 Query: 394 QTSQLQNLLAIVCRSHHVSIIKLLGATVSGDHIYLVYDFVHGASLSDCLRSKNNAHFTVLSTWMSRMQVAADLAHGLDYIHNKTGLNINFVHSHIKTSGIIVTEPSFNARVCHFGTAQLCGEIDLQTDKLSEIREETPSPARSKQFEGVRGYMAPEFQVSGVATQKSDVYAFGVVILELLSGEEPLKFRFDEKTRGFVKTSVIEAAMAAVDGGEGRLRNWVDRRLNDSFPVDVVEKLTRVALECVHVDPDKRPNMGRVAGKISKFYL--TSRKWFD 1215 Q Q N + ++ + +H +++KLLG + + LVY+F+ +L D L + F TW R+++A ++A L Y+H+ + I +H +KT+ I++ E + A+V FG ++L I + ++L+ + +G GY+ PE+ +G+ +KSDVY+FGVV++ELLSGE+ L F + ++ V S +AM E RL +D ++ + + +++ R+A+EC + ++RP+M VA ++ + T +W D Sbjct: 445 QVEQFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFISSGTLFDHLHG---SMFDSSLTWEHRLRIAIEVAGTLAYLHSYASIPI--IHRDVKTANILLDE-NLTAKVADFGASRL---IPMDQEQLTTM------------VQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGEKALCFERPQSSKHLV--SYFVSAMK-----ENRLHEIIDGQVMNEYNQREIQESARIAVECTRIMGEERPSMKEVAAELEALRVKTTKHQWSD 692
BLAST of rna-KK1_026291 vs. DB:Swiss
Match: CERK1_PHYPA (Chitin elicitor receptor kinase 1 OS=Physcomitrella patens subsp. patens OX=3218 GN=CERK1 PE=2 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 2.630e-29 Identity = 90/329 (27.36%), Postives = 155/329 (47.11%), Query Frame = 1 Query: 259 YQFSEICAATNNF-LAKR--HSSSTPCWRCTLRGADVIVFQRKFRRMLQTSQLQNLLAIVCRSHHVSIIKLLGATVSGDHIYLVYDFVHGASLSDCLRSKNNAHFTVLSTWMSRMQVAADLAHGLDYIHNKTGLNINFVHSHIKTSGIIVTEPSFNARVCHFGTAQLCGEIDLQTDKLSEIREETPSPARSKQFEGVRGYMAPEFQVSGVATQKSDVYAFGVVILELLSG----EEPLKFRFDEKTRGFVK-----TSVIEAAMAAVDGGEGRLRNWVDRRLNDSFPVDVVEKLTRVALECVHVDPDKRPNMGRVAGKISKFYLTSRKW 1209 + + E+ AAT+NF LAK+ + +R + + K + T + L ++ HH ++++L+G + + ++LVY+++ +L LR + + LS W+ R+Q+ D A GL+YIH T ++H IK++ I++ + +F A+V FG A+L E G GYM PE+ + G + K DVYAFGVV+ E++SG L D+++ + TS E + D G+ L +D LN + +D V K+ ++A C H PD RP M ++ +++W Sbjct: 318 FTYEELAAATDNFSLAKKIGQGGFASVYYGVIRDQKLAI---KKMTLQCTKEFLAELQVLTNVHHTNLVQLIGYCTT-NSLFLVYEYIENGTLDHHLRRRKSDDKPPLS-WLQRVQICLDSARGLEYIHEHT--KPTYIHRDIKSANILLDD-NFRAKVADFGLAKLAEE------------------GTGTGIVGTFGYMPPEYALYGEVSPKLDVYAFGVVLFEIISGRVAISSALPSENDQQSPAQNRESRTLTSFFEPVLNDPD-GKTLLPKCIDPALNGEYSLDAVWKMAQLARRCTHQSPDMRPTMRFAVVQLMTLASVTQEW 619
BLAST of rna-KK1_026291 vs. DB:Swiss
Match: WAKLS_ARATH (Putative wall-associated receptor kinase-like 16 OS=Arabidopsis thaliana OX=3702 GN=WAKL16 PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.702e-29 Identity = 83/291 (28.52%), Postives = 143/291 (49.14%), Query Frame = 1 Query: 394 QTSQLQNLLAIVCRSHHVSIIKLLGATVSGDHIYLVYDFVHGASLSDCLRSKNNAHFTVLSTWMSRMQVAADLAHGLDYIHNKTGLNINFVHSHIKTSGIIVTEPSFNARVCHFGTAQLCGEIDLQTDKLSEIREETPSPARSKQF----EGVRGYMAPEFQVSGVATQKSDVYAFGVVILELLSGEEPLKFRFDEKTRGFVKTSVIEAAMAAVDGGEGRLRNWVDRRLNDSFPVDVVEKLTRVALECVHVDPDKRPNMGRVAGKISKF--YLTSRKWFDSIKMPDITVSL 1248 Q Q N + ++ + +H +++KLLG + + LVY+F+ G SL D L + + F TW R+++A ++A + Y+H +G +I +H IKT I++ E + A+V FG ++L P +Q +G GY+ PE+ + + +KSDVY+FGVV++EL+SG++ L F E ++ V V+ E RL +D ++ + + + RVA+EC + ++RP M VA ++ T W D + P+ V L Sbjct: 145 QVEQFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFITGGSLFDHL---HGSMFVSSLTWEHRLEIAIEVAGAIAYLH--SGASIPIIHRDIKTENILLDE-NLTAKVADFGASKL-------------------KPMDKEQLTTMVQGTLGYLDPEYYTTWLLNEKSDVYSFGVVLMELISGQKALCFERPETSKHLVSYFVLATK-------ENRLHEIIDDQVLNEENQREIHEAARVAVECTRLKGEERPRMIEVAAELETLRAKTTKHNWLD--QYPEENVHL 401
BLAST of rna-KK1_026291 vs. DB:Swiss
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana OX=3702 GN=At1g01540 PE=1 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 7.454e-29 Identity = 91/318 (28.62%), Postives = 153/318 (48.11%), Query Frame = 1 Query: 241 PENPHI-----YQFSEICAATNNFLAKR---HSSSTPCWRCTLR-GADVIVFQRKFRRMLQTSQLQNLLAIVCRSHHVSIIKLLGATVSGDHIYLVYDFVHGASLSDCLRSKNNAHFTVLSTWMSRMQVAADLAHGLDYIHNKTGLNINFVHSHIKTSGIIVTEPSFNARVCHFGTAQLCGEIDLQTDKLSEIREETPSPARSKQFEGVRGYMAPEFQVSGVATQKSDVYAFGVVILELLSGEEPLKFRFDEKTRGFVKTSVIEAAMAAVDGGEGRLRNWVDRRLNDSFPVDVVEKLTRVALECVHVDPDKRPNMGRV 1167 PE H+ Y E+ AATN + +R L G V V R + + + ++ R H ++++LLG V G + LVYDFV +L + + + L TW RM + +A GL Y+H GL VH IK+S I++ + +NA+V FG A+L G + S + + G GY+APE+ +G+ +KSD+Y+FG++I+E+++G P+ + +R +T++++ + V G R VD ++ + ++++ VAL CV D +KRP MG + Sbjct: 131 PEVSHLGWGRWYTLRELEAATNGLCEENVIGEGGYGIVYRGILTDGTKVAVKNLLNNRGQAEKEFKVEVEVIGRVRHKNLVRLLGYCVEGAYRMLVYDFVDNGNLEQWIHG-DVGDVSPL-TWDIRMNIILGMAKGLAYLHE--GLEPKVVHRDIKSSNILL-DRQWNAKVSDFGLAKLLG---------------SESSYVTTRVMGTFGYVAPEYACTGMLNEKSDIYSFGILIMEIITGRNPVDY-----SRPQGETNLVDWLKSMV--GNRRSEEVVDPKIPEPPSSKALKRVLLVALRCVDPDANKRPKMGHI 421
BLAST of rna-KK1_026291 vs. DB:Swiss
Match: NCRK_ARATH (Receptor-like serine/threonine-protein kinase NCRK OS=Arabidopsis thaliana OX=3702 GN=NCRK PE=1 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.292e-28 Identity = 94/332 (28.31%), Postives = 164/332 (49.40%), Query Frame = 1 Query: 241 PENPH--IYQFS--EICAATNNFLAKR---HSSSTPCWRCTLRGADVIVFQRKFRRMLQTSQ-------LQNLLAIVCRSHHVSIIKLLG--ATVSGDHI--YLVYDFVHGASLSDCLRSKNNAHFTVLSTWMSRMQVAADLAHGLDYIHNKTGLNINFVHSHIKTSGIIVTEPSFNARVCHFGTAQLCGEIDLQTDKLSEIREETPSPARSKQFEGVRGYMAPEFQVSGVATQKSDVYAFGVVILELLSGEEPLKFRFDEKTRGFVKTSVIEAAMAAVDGGEGRLRNWVDRRLNDSFPVDVVEKLTRVALECVHVDPDKRPNMGRVAGKIS 1182 PE H I+QFS E+ ATN F + H S+ +R L+ +R L T + + ++ R HH ++ L+G + G H LV++++ SL DCL + TW R+ VA A GL+Y+H I +H +K++ I++ E +++A++ G A+ L +D L ++ S + + +G GY APE+ ++G A+Q SDV++FGVV+LEL++G +P++ + K + S++ A+ + + + D RLN F + ++ + +A EC+ +DP+ RP M V +S Sbjct: 188 PETIHGAIFQFSYTELEQATNKFSSNSVIGHGGSSCVYRGQLKDGKTAAIKR-----LNTPKGDDTDTLFSTEVELLSRLHHYHVVPLIGYCSEFHGKHAERLLVFEYMSYGSLRDCL----DGELGEKMTWNIRISVALGAARGLEYLHEAAAPRI--LHRDVKSTNILLDE-NWHAKITDLGMAKC-----LSSDGL-----QSGSSSPTTGLQGTFGYFAPEYAIAGCASQMSDVFSFGVVLLELITGRKPIQKPSNNKG----EESLVIWAVPRLQDSKRVIEELPDPRLNGKFAEEEMQIMAYLAKECLLLDPESRPTMREVVQILS 493
BLAST of rna-KK1_026291 vs. DB:Swiss
Match: WAK4_ARATH (Wall-associated receptor kinase 4 OS=Arabidopsis thaliana OX=3702 GN=WAK4 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 1.694e-28 Identity = 81/276 (29.35%), Postives = 144/276 (52.17%), Query Frame = 1 Query: 394 QTSQLQNLLAIVCRSHHVSIIKLLGATVSGDHIYLVYDFVHGASLSDCLRSKNNAHFTVLSTWMSRMQVAADLAHGLDYIHNKTGLNINFVHSHIKTSGIIVTEPSFNARVCHFGTAQLCGEIDLQTDKLSEIREETPSPARSKQFEGVRGYMAPEFQVSGVATQKSDVYAFGVVILELLSGEEPLKFRFDEKTRGFVKTSVIEAAMAAVDGGEGRLRNWVDRRLNDSFPVDVVEKLTRVALECVHVDPDKRPNMGRVAGKISKFYL--TSRKWFD 1215 Q Q N + ++ + +H +++KLLG + + LVY+F+ +L D L + F TW R+++A ++A L Y+H+ + I +H IKT+ I++ E + A+V FG ++L I + + L+ + +G GY+ PE+ +G+ +KSDVY+FGVV++ELLSG++ L F + ++ V S +A E RL +D ++ + ++K R+A+EC + ++RP M VA ++ + T KW D Sbjct: 447 QVEQFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFISSGTLFDHLHG---SMFDSSLTWEHRLRMAVEIAGTLAYLHSSASIPI--IHRDIKTANILLDE-NLTAKVADFGASRL---IPMDKEDLATM------------VQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGQKALCFERPQTSKHIV--SYFASATK-----ENRLHEIIDGQVMNENNQREIQKAARIAVECTRLTGEERPGMKEVAAELEALRVTKTKHKWSD 694 The following BLAST results are available for this feature:
BLAST of rna-KK1_026291 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: C. cajan Asha genome v1.0 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: Cajanus cajan Asha genome v1.0
Date Performed: 2019-09-17
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-KK1_026291_Cc_Asha_v1.0 ID=rna-KK1_026291_Cc_Asha_v1.0; Name=rna-KK1_026291; organism=Cajanus cajan; type=mRNA; length=1260bpback to top protein sequence of rna-KK1_026291_Cc_Asha_v1.0 >rna-KK1_026291_Cc_Asha_v1.0 ID=rna-KK1_026291_Cc_Asha_v1.0; Name=rna-KK1_026291_Cc_Asha_v1.0; organism=Cajanus cajan; type=polypeptide; length=419bpback to top mRNA from alignment at Scaffold126026-KQ483432.1:53792..55051+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>rna-KK1_026291_Cc_Asha_v1.0 ID=rna-KK1_026291_Cc_Asha_v1.0; Name=rna-KK1_026291; organism=Cajanus cajan; type=mRNA; length=1260bp; location=Sequence derived from: Scaffold126026-KQ483432.1:53792..55051+ (Cajanus cajanback to top Coding sequence (CDS) from alignment at Scaffold126026-KQ483432.1:53792..55051+ >rna-KK1_026291_Cc_Asha_v1.0 ID=rna-KK1_026291_Cc_Asha_v1.0; Name=rna-KK1_026291; organism=Cajanus cajan; type=CDS; length=2520bp; location=Sequence derived from: Scaffold126026-KQ483432.1:53792..55051+ (Cajanus cajanback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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