rna-KK1_019888

Transcript Overview
Namerna-KK1_019888
Unique Namerna-KK1_019888_Cc_Asha_v1.0
TypemRNA
OrganismCajanus cajan (pigeon pea)
Sequence length2268
ProductU-box domain-containing protein 6
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_1-CM003603.1supercontigChr_1-CM003603.1:1560356..1564234 +Cajanus cajan Asha genome v1.0n/a
Chr_1-CM003603.1supercontigChr_1-CM003603.1:1560356..1564234 +Cajanus cajan Asha genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Cajanus cajan Asha genome v1.02019-09-17
BLAST: C. cajan Asha genome v1.0 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
cccrR0011Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
cccrR0043Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ccpsR022Pisum sativum Cameor genome v1aPisum sativum
ccpsR024Pisum sativum Cameor genome v1aPisum sativum
ccpsR033Pisum sativum Cameor genome v1aPisum sativum
ccccR001Cajanus cajan Asha genome v1.0Cajanus cajan
ccpvR0004Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccpvR0019Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccvuR0003Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccvuR0016Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caiccL0518Cicer arietinum ICC 4958 genome v2Cicer arietinum
caiccL0673Cicer arietinum ICC 4958 genome v2Cicer arietinum
caccL0156Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caccL0552Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caccL0721Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
anccL0005Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccL0256Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccL0259Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccL0379Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccL0433Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccL0833Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccL0912Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asccL0009Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cctifR0010Vicia faba cv. Tiffany genome v1.0Vicia faba
cctifR0036Vicia faba cv. Tiffany genome v1.0Vicia faba
ccvfhR0010Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccvfhR0039Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccvrvR0014Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccvrvR0038Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccvssR0010Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccvuaR0003Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
ccvssR0042Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccvuaR0020Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canccL0553Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canccL0728Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjccL0331Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjccL0697Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carccL0594Cicer arietinum
carccL0777Cicer arietinum
ccccaR0000Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccccaR0054Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccvumR0009Vigna umbellata FF25 genome v1.0Vigna umbellata
ccvumR0042Vigna umbellata FF25 genome v1.0Vigna umbellata

Orthologs
Gene/TranscriptAssemblySpecies
Ca_20480Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
rna-XM_014638721.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Psat7g078440.1Pisum sativum Cameor genome v1aPisum sativum
Cr_21880.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Vfaba.Hedin2.R1.6g055040.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Cr_13030.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
rna-TanjilR_09114Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vfaba.Hedin2.R1.2g112040.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
evm.model.Chr01.2311.1.6211317bVigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
LR48_mrnaVigan01g095300Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Phvul.001G260300.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vum_01G01546.1Vigna umbellata FF25 genome v1.0Vigna umbellata
jg53569.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Tiffany.R1.2g092040.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vigun03g169300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
evm.model.Chr03.3723.2.6211317dVigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Va03G085140.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Psat5g095880.1Pisum sativum Cameor genome v1aPisum sativum
rna-XM_014654318.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
jg30397.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-TanjilR_11008Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Ca_11333Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Ca_13721.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Vum_04G03214.1Vigna umbellata FF25 genome v1.0Vigna umbellata
rna-TanjilR_33003Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Va01G038960.2Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vfaba.Tiffany.R1.6g045800.1Vicia faba cv. Tiffany genome v1.0Vicia faba
rna-XM_027334640.1Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Vigun01g245800.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Phvul.002G175000.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Ca_16304.1Cicer arietinum ICC 4958 genome v2Cicer arietinum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Cc_v2.0_22024.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Cc_v2.0_00100.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
rna-KK1_025163Cajanus cajan Asha genome v1.0Cajanus cajan
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-KK1_019888gene-KK1_019888_Cc_Asha_v1.0Cajanus cajangene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-KK1_019888rna-KK1_019888_Cc_Asha_v1.0-proteinCajanus cajanpolypeptide
rna-KK1_019888_Cc_Asha_v1.0rna-KK1_019888_Cc_Asha_v1.0Cajanus cajanpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-KK1_019888_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1560356..1560406rna-KK1_019888_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1560356..1560406Cajanus cajanexon
rna-KK1_019888_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1560356..1560406rna-KK1_019888_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1560356..1560406Cajanus cajanexon
rna-KK1_019888_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1560820..1561005rna-KK1_019888_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1560820..1561005Cajanus cajanexon
rna-KK1_019888_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1560820..1561005rna-KK1_019888_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1560820..1561005Cajanus cajanexon
rna-KK1_019888_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1561178..1561285rna-KK1_019888_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1561178..1561285Cajanus cajanexon
rna-KK1_019888_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1561178..1561285rna-KK1_019888_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1561178..1561285Cajanus cajanexon
rna-KK1_019888_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1561622..1561987rna-KK1_019888_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1561622..1561987Cajanus cajanexon
rna-KK1_019888_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1561622..1561987rna-KK1_019888_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1561622..1561987Cajanus cajanexon
rna-KK1_019888_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1562111..1562877rna-KK1_019888_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1562111..1562877Cajanus cajanexon
rna-KK1_019888_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1562111..1562877rna-KK1_019888_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1562111..1562877Cajanus cajanexon
rna-KK1_019888_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1563445..1564234rna-KK1_019888_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1563445..1564234Cajanus cajanexon
rna-KK1_019888_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1563445..1564234rna-KK1_019888_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1563445..1564234Cajanus cajanexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-KK1_019888_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1560356..1560406rna-KK1_019888_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1560356..1560406Cajanus cajanCDS
rna-KK1_019888_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1560356..1560406rna-KK1_019888_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1560356..1560406Cajanus cajanCDS
rna-KK1_019888_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1560820..1561005rna-KK1_019888_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1560820..1561005Cajanus cajanCDS
rna-KK1_019888_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1560820..1561005rna-KK1_019888_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1560820..1561005Cajanus cajanCDS
rna-KK1_019888_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1561178..1561285rna-KK1_019888_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1561178..1561285Cajanus cajanCDS
rna-KK1_019888_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1561178..1561285rna-KK1_019888_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1561178..1561285Cajanus cajanCDS
rna-KK1_019888_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1561622..1561987rna-KK1_019888_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1561622..1561987Cajanus cajanCDS
rna-KK1_019888_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1561622..1561987rna-KK1_019888_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1561622..1561987Cajanus cajanCDS
rna-KK1_019888_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1562111..1562877rna-KK1_019888_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1562111..1562877Cajanus cajanCDS
rna-KK1_019888_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1562111..1562877rna-KK1_019888_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1562111..1562877Cajanus cajanCDS
rna-KK1_019888_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1563445..1564234rna-KK1_019888_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1563445..1564234Cajanus cajanCDS
rna-KK1_019888_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1563445..1564234rna-KK1_019888_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1563445..1564234Cajanus cajanCDS


Homology
BLAST of rna-KK1_019888 vs. DB:Swiss
Match: PUB6_ARATH (U-box domain-containing protein 6 OS=Arabidopsis thaliana OX=3702 GN=PUB6 PE=2 SV=2)

HSP 1 Score: 1003.43 bits (2593), Expect = 0.000e+0
Identity = 507/771 (65.76%), Postives = 604/771 (78.34%), Query Frame = 1
Query:    1 MDVAELEENLFAAGDAKLHGEMCKCLSAIYCKILSLFPSLEAARPRSKSGIQALCSLHVALEKAKNVLQHCSECSKLYLAITGDSVLLKFEKAKCALEDSLKRVEDIVPQSIGCQIDEIVNELASTVFALDPIEKQVGDDLIALLQQGRKFSDSNDCNELECFHLTATRIGITSSRAALTERRCLKKLIDRARAEEDKRKESIIAFLLHLMRKYSKLFRSEFSDDNDSQGSTPCSPTDGIPG----GHFDRQLSKLSSFNFKP-NNRKSGQMLLPPEELRCPISLQLMNDPVIIASGQTYERVCIEKWFRDGHNTCPKTQQKLSHLSLTPNYCVKGLVASWCEQNGVPIPEGPPESLDYHYWRLALSDSESTNSRSVNSVGSCKLKSVKVVPVXXXXXXXXXXXXXXXXXXXXXXGN-----EQYLGFLNFLTEGNNWKRKCKVVEQLRRVLRDDEEARIFMGANGFVEAFMQFLQSAMHEGDVMALDNGAMALFNLAVNNNRNKEIMISAGILSLLEEMNSKSSSYGCAAALYLNLSCLEEAKRVIGTSQAVQFLIQILHAETEVLCKLDSLHALYNLSTVPDNIPNLLSSGIVNGLQTLFVSQGDSTWTEKCIAVLINLAVSQEGREEIMLAPGLISALASTLDTGEPLEQEQAASCLLILCNRSEKCCELVLQEGVIPALVSISVNGTSRGREKSQKLLMLFREQRQREHSAAKTDEGESESSDLSM-LP--------ETKPLCKSISRRKAVGKAFSFLWKSKSYSV 2256
            MDV+ELEENLFAA DAKLHG+MCK LSA+YCK+LS+FPSLE ARPRSKSGIQ LCSLH+ALEKAKN+LQHCSECSKLYLAITGD+VLLKFEKAK AL DSL+RVEDIVP SIG QI +IV EL  T F LDP EK+VGD +IALLQQG+KF + +D  ELE FH  ATR+ ITSSR+AL ERR LKK+IDRAR EEDKRKESI+A+LLHLMRKYSKLFRSE  D+NDS  STPCSPT   P       F RQLSK  S N+KP N+RKSGQM +PPEELRCPISLQLM DPVIIASGQTYERVCIEKWF DGHN+CPKTQQ+L HLSLTPNYCVKGL+ASWCEQNG+ +P GPPESLD +YWRLA+SDSES NS+SV+SVG C  K ++VVP+EES   E   +   ++ +  E  +     E Y   L  + +  +  +KCKVVE +R +L+D+EEARI MGANGFVEAF+QFL+SA+H+ +  A + GAMALFNLAVNNNRNKE+M+++G++ LLE+M S S S G A ALYLNLSCLE+AK VIG+SQAV F + +L  +T+  CKLD+LHALYNLST   NIP LLSS I+  LQ L  S G+  W EK +AVL+NLA S+EG+EE++   G+IS LA+ LDTG+ +EQEQA SCL+ILC  SE C ++VLQEGVIP+LVSISVNG+ RGR+KSQKLLMLFREQR R+  +   +E   ++    M +P        E KPL KSISRRK + + FSFLWK KS+S+
Sbjct:    1 MDVSELEENLFAASDAKLHGDMCKELSAVYCKVLSIFPSLEEARPRSKSGIQTLCSLHIALEKAKNILQHCSECSKLYLAITGDAVLLKFEKAKSALIDSLRRVEDIVPSSIGSQILDIVGELEHTKFLLDPSEKEVGDRIIALLQQGKKFDNGSDSTELEIFHQAATRLSITSSRSALAERRALKKVIDRARVEEDKRKESIVAYLLHLMRKYSKLFRSEMMDENDSPCSTPCSPTGQGPNEDRVNAFGRQLSKFGSINYKPMNSRKSGQMPIPPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNSCPKTQQQLPHLSLTPNYCVKGLIASWCEQNGITVPTGPPESLDLNYWRLAMSDSESPNSKSVDSVGLCTPKDIRVVPLEESSTIESERQQKEKNNAPDEVDSEINVLEGYQDILAIVDKEEDLAKKCKVVENVRILLKDNEEARILMGANGFVEAFLQFLESAVHDNNAAAQETGAMALFNLAVNNNRNKELMLTSGVIPLLEKMISCSQSQGPATALYLNLSCLEKAKPVIGSSQAVSFFVNLLLQDTKTQCKLDALHALYNLSTYSPNIPTLLSSNIIKSLQVL-ASTGNHLWIEKSLAVLLNLASSREGKEEMITTQGMISTLATVLDTGDTVEQEQAVSCLVILCTGSESCIQMVLQEGVIPSLVSISVNGSPRGRDKSQKLLMLFREQRHRDQPSPNKEEAPRKTVSAPMAIPAPVSAPESEVKPLTKSISRRKTMTRPFSFLWK-KSHSI 769          
BLAST of rna-KK1_019888 vs. DB:Swiss
Match: PUB7_ARATH (U-box domain-containing protein 7 OS=Arabidopsis thaliana OX=3702 GN=PUB7 PE=2 SV=1)

HSP 1 Score: 991.104 bits (2561), Expect = 0.000e+0
Identity = 514/783 (65.64%), Postives = 602/783 (76.88%), Query Frame = 1
Query:    1 MDVAELEENLFAAGDAKLHGEMCKCLSAIYCKILSLFPSLEAARPRSKSGIQALCSLHVALEKAKNVLQHCSECSKLYLAITGDSVLLKFEKAKCALEDSLKRVEDIVPQSIGCQIDEIVNELASTVFALDPIEKQVGDDLIALLQQGRKFSDSNDCNELECFHLTATRIGITSSRAALTERRCLKKLIDRARAEEDKRKESIIAFLLHLMRKYSKLFRSEFSDDNDSQGSTPCSPTDGIPGGH-FDRQLSKLSSFNFKP-NNRKSGQMLLPPEELRCPISLQLMNDPVIIASGQTYERVCIEKWFRDGHNTCPKTQQKLSHLSLTPNYCVKGLVASWCEQNGVPIPEGPPESLDYHYWRLALSDSESTNSRSVNSVGSCKLKSVKVVPVXXXXXXXXXXXXXXXXXXXXXXGN--------EQYLGFLNFLTEGNNWKRKCKVVEQLRRVLRDDEEARIFMGANGFVEAFMQFLQSAMHEGDVMALDNGAMALFNLAVNNNRNKEIMISAGILSLLEEMNSKSSSYGCAAALYLNLSCLEEAKRVIGTSQAVQFLIQILHAETEVLCKLDSLHALYNLSTVPDNIPNLLSSGIVNGLQTLFVSQGDSTWTEKCIAVLINLAVSQEGREEIMLAPGLISALASTLDTGEPLEQEQAASCLLILCNRSEKCCELVLQEGVIPALVSISVNGTSRGREKSQKLLMLFREQR-QREHSAAKTDE------------------GESESSDLSMLPETKPLCKSISRRKAVGKAFSFLWKSKSYSVSQ 2262
            MDV ELEENLFAA DAKLHG+MCK LS + CK+LS+FPSLE ARPRSKSGIQALCSLH+ALEKAKN+LQHCSECSKLYLAITGD+VLLKFEKAK AL D LKRVEDIVP SIG QI EIV EL +T F LDP EK+VGD +IALLQQG+KF + ND  ELE FH  ATR+ ITSSR AL ERR LKKLIDRARAEEDKRKESI+A+LLHLMRK SKLFRSE  D+NDS GS PCSP +     H F RQLS+  S N KP N+  SGQM +PPEELRCPISLQLM DPVIIASGQTYERVCIEKWF DGHNTCPKTQQ+L H+SLTPN CVKGL+ASWCEQNG  IP GPPES D  YWRLALSDSEST S+SVNS+GS KLK VK+VP+EE+G +    +   ESF + ++          E+Y   L  L E    ++KCKVVE++R +L+DDEEARIFMGANGFVEA ++FL SA+ + +  A D+GAMALFNLAVNNNRNKE+M+++G++ LLE+M S + S+G A ALYLNLSCL+EAK VIG+SQAV FL+Q+L  E E  CKLD+LHALYNLST   NIP LLSS I+  LQ L  S G++ W EK +AVL+NLA SQEG++E + + G+IS+LA+ LD G+  EQEQA SCLLILCN  E C ++VLQEGVIP+LVSISVNGT RGREKSQKLLMLFRE+R QR+  ++  DE                  G + +S      E + L KS+SRRK++ + FSF WK KSYSV +
Sbjct:    1 MDVTELEENLFAASDAKLHGDMCKELSGVLCKVLSIFPSLEGARPRSKSGIQALCSLHIALEKAKNILQHCSECSKLYLAITGDAVLLKFEKAKIALIDGLKRVEDIVPSSIGSQILEIVGELENTRFMLDPSEKEVGDQIIALLQQGKKFDNCNDNTELEIFHRAATRLSITSSRVALAERRALKKLIDRARAEEDKRKESIVAYLLHLMRKCSKLFRSEILDENDSPGSYPCSPNEDHGSVHGFGRQLSRFGSLNDKPMNSINSGQMPVPPEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQQLPHISLTPNNCVKGLIASWCEQNGTQIPSGPPESQDLDYWRLALSDSESTKSQSVNSIGSYKLKGVKIVPLEENGTTVVERQNTEESFVSDDDDEEDSDINVLERYQDLLAVLNEEEGLEKKCKVVEKIRLLLKDDEEARIFMGANGFVEALLRFLGSAVDDNNAAAQDSGAMALFNLAVNNNRNKELMLTSGVIRLLEKMISSAESHGSATALYLNLSCLDEAKSVIGSSQAVPFLVQLLQKEIETQCKLDALHALYNLSTYSPNIPALLSSNIIKSLQGLLASTGENLWIEKSLAVLLNLASSQEGKDEAVSSQGMISSLATVLDMGDTTEQEQAVSCLLILCNGRESCIQMVLQEGVIPSLVSISVNGTPRGREKSQKLLMLFREERQQRDQPSSNRDEPPQKEPARKSLSAPLSVHGSTPASASVQDYEPRVLSKSMSRRKSMARPFSFFWK-KSYSVRE 782          
BLAST of rna-KK1_019888 vs. DB:Swiss
Match: PUB45_ARATH (U-box domain-containing protein 45 OS=Arabidopsis thaliana OX=3702 GN=PUB45 PE=1 SV=1)

HSP 1 Score: 975.696 bits (2521), Expect = 0.000e+0
Identity = 507/773 (65.59%), Postives = 607/773 (78.53%), Query Frame = 1
Query:    1 MDVAELEENLFAAGDAKLHGEMCKCLSAIYCKILSLFPSLEAARPRSKSGIQALCSLHVALEKAKNVLQHCSECSKLYLAITGDSVLLKFEKAKCALEDSLKRVEDIVPQSIGCQIDEIVNELASTVFALDPIEKQVGDDLIALLQQGRKFSDSNDCNELECFHLTATRIGITSSRAALTERRCLKKLIDRARAEEDKRKESIIAFLLHLMRKYSKLFRSEFSDDNDSQGST--PCSPT-----DGIPGGHFDRQLSKLSSFNFKP--NNRKSGQMLLPPEELRCPISLQLMNDPVIIASGQTYERVCIEKWFRDGHNTCPKTQQKLSHLSLTPNYCVKGLVASWCEQNGVPIPEGPPESLDYHYWRLALSDSESTNSRSVNSVGSCKLKSVKVVPVXXXXXXXXXXXXXXXXXXXXXXGNEQYLGFLNFLTEGNNWKRKCKVVEQLRRVLRDDEEARIFMGANGFVEAFMQFLQSAMHEGDVMALDNGAMALFNLAVNNNRNKEIMISAGILSLLEEMNSKSSSYGCAAALYLNLSCLEEAKRVIGTSQAVQFLIQILHAETEVLCKLDSLHALYNLSTVPDNIPNLLSSGIVNGLQTLFVSQGDSTWTEKCIAVLINLAVSQEGREEIMLAPGLISALASTLDTGEPLEQEQAASCLLILCNRSEKCCELVLQEGVIPALVSISVNGTSRGREKSQKLLMLFREQRQREHS---------AAKTDEGESESSDLSMLPETKPLCKSISRRKAVGKAFSFLWKSKSYSVSQC 2265
            MDV E+EEN FA GDAKLHG+MC  LS IYCKI+S+FPSLEAARPRSKSGIQALCSLHV LEK KN+L+HC+E SKLYLAITGDSV+LKFEKAK +L DSL+RVEDIV QSIG Q+ EI+ EL +T F+LDP EK++GD +I LLQQG  F  S+D NELE FH  ATR+GITSSRAALTERRCLKKLI+RAR E+DKRKESI+A+LLHLMRKYSKLFRSE  DDNDSQGS+  PCSPT     D   G  FDRQLSKLSSFNF+   NNR+S QM +PPEELRCPISLQLM DPVIIASGQTYER+CIEKWF DGHNTCPKT Q+LSHL LTPNYCVK L++SWCEQNGV +P+GPPESLD +YWRLALS SEST++RS   VGSCKLK VKVVP+EESG  ++                E+    L  LT+ +  ++KC+VVEQ+R +L+DDEEARI MG NG VEA +QFL SA++E +  A   GAMALFNLAV+NNRNKE+M+++GI+ LLEEM     S+G   A+YLNLSCLEEAK VIG+S AV F++ +L  ETEV CK+D+LH+L++LST P NIP LLS+ +VN LQ+L +S  +  WTEK +AVL+NL +++ G++E++ AP L+S L + LDTGEP EQEQA S LLILCN SE C E+VLQEGVIP+LVSISVNGT RGRE++QKLL LFRE RQR+ +             ++G S +S  + + ETKP CKS SR+K +G+AFSFLWKSKS+SV QC
Sbjct:    1 MDVNEVEENFFAPGDAKLHGKMCNALSVIYCKIMSIFPSLEAARPRSKSGIQALCSLHVVLEKVKNILRHCTESSKLYLAITGDSVVLKFEKAKSSLTDSLRRVEDIVQQSIGSQLLEILMELENTEFSLDPAEKEIGDQIIGLLQQGGNFESSSDNNELEVFHQAATRLGITSSRAALTERRCLKKLIERARMEDDKRKESIVAYLLHLMRKYSKLFRSEIWDDNDSQGSSSLPCSPTIQGSIDDAHGRAFDRQLSKLSSFNFRSCNNNRRSSQMSVPPEELRCPISLQLMYDPVIIASGQTYERICIEKWFSDGHNTCPKTHQQLSHLCLTPNYCVKALISSWCEQNGVQVPDGPPESLDLNYWRLALSVSESTDTRSAKRVGSCKLKDVKVVPLEESGTIKEEACESEYQEDQVTLV-ERCTELLTTLTDVDTLRKKCRVVEQIRVLLKDDEEARILMGENGCVEALLQFLGSALNENNASAQKVGAMALFNLAVDNNRNKELMLASGIIPLLEEMLCNPHSHGSVTAIYLNLSCLEEAKPVIGSSLAVPFMVNLLWTETEVQCKVDALHSLFHLSTYPPNIPCLLSADLVNALQSLTISD-EQRWTEKSLAVLLNLVLNEAGKDEMVSAPSLVSNLCTILDTGEPNEQEQAVSLLLILCNHSEICSEMVLQEGVIPSLVSISVNGTQRGRERAQKLLTLFRELRQRDQTHLTEPQHTEVTSPEDGFSVAS--AAVTETKPQCKSASRKK-MGRAFSFLWKSKSFSVYQC 768          
BLAST of rna-KK1_019888 vs. DB:Swiss
Match: PUB13_ARATH (U-box domain-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=PUB13 PE=1 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 7.841e-49
Identity = 172/670 (25.67%), Postives = 314/670 (46.87%), Query Frame = 1
Query:  160 LCSLHVALEKAKNVLQHCSECSKLYLAITGDSVLLKFEKAKCALEDSLKRV---EDIVPQSIGCQIDEIVNELASTVFALDPIEKQVGDDLIALLQQGRKFSDSNDCNELE-CFHLTATRIGITSSRAALTERRCLKKLIDRARAEEDKRKESIIAFLLHLMRKYSKLFRSEFSDDNDSQGSTPCSPTDGIPGGHFDRQLSKLSSFNFKPNNRKSGQMLLPPEELRCPISLQLMNDPVIIASGQTYERVCIEKWFRDGHNTCPKTQQKLSHLSLTPNYCVKGLVASWCEQNGVPIPEGPPESLDYHYWRLALSDSESTNSRSVNSVGSCKLKSVKVVPVXXXXXXXXXXXXXXXXXXXXXXGNEQYLGFLNFLTEGNNWKRKCKVVEQLRRVLRDDEEARIFMGANGFVEAFMQFLQSAMHEGDVMALDNGAMALFNLAVNNNRNKEIMISAGILSLLEEMNSKSS--SYGCAAALYLNLSCLEEAKRVIGTSQAVQFLIQILHAETEVLCKLDSLHALYNLSTVPDNIPNLLSSGIVNGLQTLFVSQGDSTWTEKCIAVLINLAVSQEGREEIMLAPGLISALASTLDTGEPLEQEQAASCLLILCNRSEKCCELVLQEGVIPALVSISVNGTSRGREKSQKLL-MLFREQRQREHSAAKTDEGESESS 2148
            L +L  A+  AK+ L+ CS+ SK+YL +  + V  K  +    LE SL ++   E  +   +  Q++ ++++       +D  + ++ +DL +L  +      S+D +  +      A ++ +        E   L +++  +  +  +  E + A +L +++ +      +  DDN  +                 +++   S  N + +   S ++ + P++ RCPISL++M DPVI++SGQTYER CIEKW   GH+TCPKTQQ L+  +LTPNY ++ L+A WCE N +  P+ PP SL                 R V+S  S   ++ K+                           E  +  L +   GN   ++    E +R + + + + R+ +   G +   +  L +     D    ++   AL NL++  N NK  ++SAG +  + ++  K S  +   AAA   +LS ++E K  IG   A+  L+ +L+  T+   K D+  AL+NL     N    + +G++  L  L    G S   ++ +A+L  L+   EG+  I+ +   + +L   + TG P  +E AA+ L+ LC+   +      + G++  L+ ++ NGT RG+ K+ +LL  + R   Q++ +A    E E+E +
Sbjct:   65 LMNLKEAMCSAKDYLKFCSQGSKIYLVMEREQVTSKLMEVSVKLEQSLSQIPYEELDISDEVREQVELVLSQFRRAKGRVDVSDDELYEDLQSLCNK------SSDVDAYQPVLERVAKKLHLMEIPDLAQESVALHEMVASSGGDVGENIEEM-AMVLKMIKDFV-----QTEDDNGEE-----------------QKVGVNSRSNGQTSTAASQKIPVIPDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPKTQQALTSTTLTPNYVLRSLIAQWCEANDIEPPK-PPSSL---------------RPRKVSSF-SSPAEANKI---------------------------EDLMWRLAY---GNPEDQRSAAGE-IRLLAKRNADNRVAIAEAGAIPLLVGLLSTP----DSRIQEHSVTALLNLSICEN-NKGAIVSAGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGALGAIPPLVVLLNEGTQ-RGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPG-SGMVDEALAILAILSSHPEGK-AIIGSSDAVPSLVEFIRTGSPRNRENAAAVLVHLCSGDPQHLVEAQKLGLMGPLIDLAGNGTDRGKRKAAQLLERISRLAEQQKETAVSQPEEEAEPT 649          
BLAST of rna-KK1_019888 vs. DB:Swiss
Match: PUB12_ORYSJ (U-box domain-containing protein 12 OS=Oryza sativa subsp. japonica OX=39947 GN=PUB12 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 2.605e-46
Identity = 131/429 (30.54%), Postives = 198/429 (46.15%), Query Frame = 1
Query:  811 PEELRCPISLQLMNDPVIIASGQTYERVCIEKWFRDGHNTCPKTQQKLSHLSLTPNYCVKGLVASWCEQNGVPIPEGPPESLDYHYWRLALSDSESTNSRSVNSVGSCKLKSVKVVPVXXXXXXXXXXXXXXXXXXXXXXGNEQYLGFLNFLTEGNNWKRKCKVVEQLRRVLRDDEEARIFMGANGFVEAFMQFLQSAMHEGDVMALDNGAMALFNLAVNNNRNKEIMISAGILSLLEEMNSKS-SSYGCAAALYLNLSCLEEAKRVIGTSQAVQFLIQILHAETEVLCKLDSLHALYNLSTVPDNIPNLLSSGIVNGLQTLFVSQGDSTWTEKCIAVLINLAVSQEGREEIMLAPG-LISALASTLDTGEPLEQEQAASCLLILCNRSEKCCELVLQEGVIPALVSISVNGTSRGREKSQKLLMLFRE 2091
            P+E RCPISL+LM DPVI++SGQTYER CI+KW   GH TCPKTQQ LSH SLTPN+ +K L++ WCE NG+ +P+                     NSR   +  S       +V                                +N L  GN  +++    E +R + + +   RI +   G +   +  L S+    D    ++   AL NL+++ N    I+ S  I  ++E + + S  +   AAA   +LS ++E K  IG + A+  LI +L  +     K D+  A++NL     N    + +GIV  L    V        E  +++L  LA + EG+  I++A    I  L   + TG P  +E AA+ L +LC+   +        GV  AL  +S  GT R + K+  +L L  +
Sbjct:  229 PDEFRCPISLELMQDPVIVSSGQTYERSCIQKWLDSGHKTCPKTQQPLSHTSLTPNFVLKSLISQWCEANGIELPKN------------------KQNSRDKKAAKSSDYDHAGLV------------------------------SLMNRLRSGNQDEQRAAAGE-IRLLAKRNVNNRICIAEAGAIPLLVNLLSSS----DPRTQEHAVTALLNLSIHENNKASIVDSHAIPKIVEVLKTGSMETRENAAATLFSLSVVDENKVTIGAAGAIPPLINLL-CDGSPRGKKDAATAIFNLCIYQGNKVRAVKAGIVIHLMNFLVDPTGGMIDE-ALSLLSILAGNPEGK--IVIARSEPIPPLVEVIKTGSPRNRENAAAILWLLCSADTEQTLAAKAAGVEDALKELSETGTDRAKRKASSILELMHQ 600          
BLAST of rna-KK1_019888 vs. DB:Swiss
Match: PUB10_ARATH (U-box domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 GN=PUB10 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 4.894e-42
Identity = 126/458 (27.51%), Postives = 215/458 (46.94%), Query Frame = 1
Query:  736 DRQLSKLSSFNFKPNNRKSGQMLLPPEELRCPISLQLMNDPVIIASGQTYERVCIEKWFRDGHNTCPKTQQKLSHLSLTPNYCVKGLVASWCEQNGVPIPEGPPESLDYHYWRLALSDSESTNSRSVNSVGSCKLKSVKVVPVXXXXXXXXXXXXXXXXXXXXXXGNEQYLGFLNFLTEGNNWKRKCKVVEQLRRVLRDDEEARIFMGANGFVEAFMQFLQSAMHEGDVMALDNGAMALFNLAVNNNRNKEIMISAGILSLLEEMNSKS-SSYGCAAALYLNLSCLEEAKRVIGTSQAVQFLIQILHAETEVLCKLDSLHALYNLSTVPDNIPNLLSSGIVNGLQTLFVSQGDSTWTEKCIAVLINLAVSQEGREEIMLAPGLISALASTLDTGEPLEQEQAASCLLILCNR-SEKCCELVLQEGVIPALVSISVNGTSRGREKSQKLLMLFREQRQR 2103
            D +L K  + N   +++KS  + +P E+  CPISL+LM DP I+++GQTYER  I++W   G+ +CPKTQQKL + +LTPNY ++ L++ WC ++ +  P G                    N R+ NS GS +                               G+   +  L       + + +   V ++R + +   + RI +   G +   ++ L S   +GD    +N    + NL++  +  + IM++  + S++  + + S  +   AAA   +LS  +E K +IG S A+  L+ +L   + V  K D+  AL+NL     N    + +GIV  L  +          ++ + +L  LA +Q  +  I+ A   I  L   L   +P  +E AA+ LL LC R +EK   +     V+P L+ +S +GT R + K+  LL L R+  ++
Sbjct:  221 DERLEKAVTEN-SDDSQKSDNLTIP-EDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFTLTPNYVLRSLISQWCTKHNIEQPGG------------------YMNGRTKNSDGSFR----------------------------DLSGDMSAIRALVCKLSSQSIEDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTS---DGDTETQENAVTCILNLSIYEHNKELIMLAGAVTSIVLVLRAGSMEARENAAATLFSLSLADENKIIIGASGAIMALVDLLQYGS-VRGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLTDSSSERMADEALTILSVLASNQVAKTAILRANA-IPPLIDCLQKDQPRNRENAAAILLCLCKRDTEKLISIGRLGAVVP-LMELSRDGTERAKRKANSLLELLRKSSRK 624          
BLAST of rna-KK1_019888 vs. DB:Swiss
Match: PUB11_ARATH (U-box domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=PUB11 PE=2 SV=2)

HSP 1 Score: 165.622 bits (418), Expect = 6.556e-42
Identity = 123/438 (28.08%), Postives = 205/438 (46.80%), Query Frame = 1
Query:  781 NRKSGQMLLPPEELRCPISLQLMNDPVIIASGQTYERVCIEKWFRDGHNTCPKTQQKLSHLSLTPNYCVKGLVASWCEQNGVPIPEGPPESLDYHYWRLALSDSESTNSRSVNSVGSCKLKSVKVVPVXXXXXXXXXXXXXXXXXXXXXXGNEQYLGFLNFLTEGNNWKRKCKVVEQLRRVLRDDEEARIFMGANGFVEAFMQFLQSAMHEGDVMALDNGAMALFNLAVNNNRNKEIMISAGILSLLEEMNSKS-SSYGCAAALYLNLSCLEEAKRVIGTSQAVQFLIQILHAETEVLCKLDSLHALYNLSTVPDNIPNLLSSGIVNGLQTLFVSQGDSTWTEKCIAVLINLAVSQEGREEIMLAPGLISALASTLDTGEPLEQEQAASCLLILCNRSEKCCELVLQEGVIPALVSISVNGTSRGREKSQKLLMLFRE 2091
            ++KS ++ +P + L CP+SL+LM DPVI+A+GQTYER  I++W   G+ TCPKTQQKL + +LTPNY ++ L++ WC ++ +  P G                    N R+ NS     +++                                    +  L+  +   R+  V E +R + +   + RI +   G +   +  L S     DV   +N    + NL++  N  + IM +  + S+++ + + +  +   AAA   +LS  +E K +IG S A+  L+ +L   T    K D+  AL+NL     N    + +GIV  L  +          ++ + +L  LA +Q+ +  I+ A  L  AL   L T +   +E AA+ LL LC R  +    + + G +  L+ +S NGT RG+ K+  LL L R+
Sbjct:  233 SKKSDKLTIPVDFL-CPVSLELMKDPVIVATGQTYERAYIQRWIDCGNLTCPKTQQKLENFTLTPNYVLRSLISRWCAEHNIEQPAG------------------YINGRTKNSGDMSVIRA-----------------------------------LVQRLSSRSTEDRRNAVSE-IRSLSKRSTDNRILIAEAGAIPVLVNLLTSE----DVATQENAITCVLNLSIYENNKELIMFAGAVTSIVQVLRAGTMEARENAAATLFSLSLADENKIIIGGSGAIPALVDLLENGTP-RGKKDAATALFNLCIYHGNKGRAVRAGIVTALVKMLSDSTRHRMVDEALTILSVLANNQDAKSAIVKANTL-PALIGILQTDQTRNRENAAAILLSLCKRDTEKLITIGRLGAVVPLMDLSKNGTERGKRKAISLLELLRK 609          
BLAST of rna-KK1_019888 vs. DB:Swiss
Match: PUB14_ARATH (U-box domain-containing protein 14 OS=Arabidopsis thaliana OX=3702 GN=PUB14 PE=1 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 1.037e-41
Identity = 130/429 (30.30%), Postives = 200/429 (46.62%), Query Frame = 1
Query:  811 PEELRCPISLQLMNDPVIIASGQTYERVCIEKWFRDGHNTCPKTQQKLSHLSLTPNYCVKGLVASWCEQNGVPIPEGPPESLDYHYWRLALSDSESTNSRSVNSVGSCKLKSVKVVPVXXXXXXXXXXXXXXXXXXXXXXGNEQYLGFLNFLTEGNNWKRKCKVVEQLRRVLRDDEEARIFMGANGFVEAFMQFLQSAMHEGDVMALDNGAMALFNLAVNNNRNKEIMISAGILSLLEEM--NSKSSSYGCAAALYLNLSCLEEAKRVIGTSQAVQFLIQILHAETEVLCKLDSLHALYNLSTVPDNIPNLLSSGIVNGLQTLFVSQGDSTWTEKCIAVLINLAVSQEGREEIMLAPGLISALASTLDTGEPLEQEQAASCLLILCNRSEKCCELVLQEGVIPALVSISVNGTSRGREKSQKLLMLFRE 2091
            PE  RCPISL+LM DPVI+++GQTYER  I+KW   GH TCPK+Q+ L H  LTPNY +K L+A WCE NG+ +P+                             GSC+   +                      S+ +      L  L  L  G   +++    E LR + + + + R+ +   G +   ++ L S     D    ++   AL NL++N   NK  ++ AG ++ + E+  N    +   AAA   +LS ++E K  IG + A+Q LI +L   T    K D+  A++NL     N    +  GIV+ L  L    G     ++ +A+L  L+ +QEG+  I  A   I  L   + TG P  +E AA+ L  LC  + +   +  + G   AL  ++ NGT R + K+  LL L ++
Sbjct:  249 PEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYVLKSLIALWCESNGIELPQNQ---------------------------GSCRTTKIG-------------------GSSSSDCDRTFVLSLLEKLANGTTEQQRAAAGE-LRLLAKRNVDNRVCIAEAGAIPLLVELLSSP----DPRTQEHSVTALLNLSINEG-NKGAIVDAGAITDIVEVLKNGSMEARENAAATLFSLSVIDENKVAIGAAGAIQALISLLEEGTR-RGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLLKDAGGG-MVDEALAILAILSTNQEGKTAIAEAES-IPVLVEIIRTGSPRNRENAAAILWYLCIGNIERLNVAREVGADVALKELTENGTDRAKRKAASLLELIQQ 622          
BLAST of rna-KK1_019888 vs. DB:Swiss
Match: PUB1_MEDTR (U-box domain-containing protein 1 OS=Medicago truncatula OX=3880 GN=PUB1 PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 4.112e-36
Identity = 181/696 (26.01%), Postives = 309/696 (44.40%), Query Frame = 1
Query:  103 SLFPSL-EAARPRSKSGIQALCSLHVALEKAKNVLQHCSECSKLYLAITGDSVLLKFEKAKCALEDSLKRVEDIVP-------QSIGCQIDEIVNELASTV---FALDPIEKQVGDDLIALLQQG----------RKFSDSNDCNELECFHLTATRIGITSSRAALTERRCLKKLIDRARAEEDKRKESIIAFLLHLMRKYSKLFRSEFSDDNDSQGSTPCSPTDGIPGGHFDRQLSKLSSFNFKPNNRKSGQMLLP--PEELRCPISLQLMNDPVIIASGQTYERVCIEKWFRDGHNTCPKTQQKLSHLSLTPNYCVKGLVASWCEQNGVPIPEGPPESLDYHYWRLALSDSESTNSRSVNSVGSCKLK--SVKVVPVXXXXXXXXXXXXXXXXXXXXXXGNEQYLGFLNFLTEGNNWKRKCKVVEQLRRVLRDDEEARIFMGANGFVEAFMQFL---QSAMHEGDVMALDNGAMALFNLAVNNNRNKEIMISAG----ILSLLEEMNSKSSSYGCAAALYLNLSCLEEAKRVIG-TSQAVQFLIQILHAETEVLCKLDSLHALYNLSTVPDNIPNLLSSGIVNGLQTLFVSQGDSTWTEKCIAVLINLAVSQEGREEIMLAPGLISALASTLDTGEPLEQEQAASCLLILCNRSEKCC--ELVLQEGVIPALVSISVNGTSRGREKSQKLLMLF 2085
            SLF  + E+  P   S I     +   + + K ++Q C++ S L+  I  D +  +F      L   + R  DI+P       Q I  Q+D ++++ +  V     +DP E Q  ++L  ++ +           + F D     E+ C       IG+ +    + E   + KL   A+ +       +++ + +LM   S      F +D +S+   P S         F    SK+   +   ++  S  M+    P+E RCPISL LM DPVI++SG TY+R+ I +W   GH+TCPK+ Q+L H +L PNY +K LV  WC +N V + E   ++ +        S     N  +++ +   K    +VK+                           E  +G L   T   + +R+     ++R + +   + R  +   G +   +  L    S + E  V AL N       L++ +N NK ++++AG    I+ +LE   +  +    AAA+Y +LS +++ K  IG +S+A+  L+ +L  E  ++ K D+  AL+NL+    N  +++ SG V  L  L +    +  T+  +AVL  L    EG EEI  +  L+  L   L  G    +E + + LL LC    +     L+     IP+L S++ +G+ R R K+  LL L 
Sbjct:   57 SLFEEIQESDSPLPPSSILCFIEIFSVITRVKVLIQECTDGSSLWSLIQLDFISNQF----FVLVKEMGRALDILPLNLLNVAQDIKEQVD-LLHKQSKRVELELFIDPREVQRRENLFEVMSKNCLQNKKTNNNKGFIDFVKVEEIMC------SIGLRTLSDYVEE---ISKLEVEAQNQAGTGGLIVVSNINNLMSLVSYTKSMVFRNDGESEECKPIS--------MFLYNKSKIHDNDSSSSSSFSQSMMTVNIPDEFRCPISLDLMRDPVIVSSGHTYDRISIAEWINSGHHTCPKSGQRLIHTALIPNYALKSLVHQWCYENNVKMNEAITKNNNS-------SSKRHKNENAIDHISENKASKDAVKMTA-------------------------EFLVGKLA--TGSTDIQRQSAY--EIRLLAKTGMDNRRIIAEVGAIPFLVTLLVSKDSRIQEHVVTALFN-------LSIYDN-NKILIMAAGAIDNIVEVLEFGKTMEARENAAAAIY-SLSMIDDCKVQIGASSRAIPALVGLLK-EGTIIGKRDAATALFNLAVYNPNKLSIVKSGAVTLLVELLMDD-KAGITDDSLAVLAVLLGCSEGLEEIKNSKSLVPLLIDLLRFGSVKGKENSITLLLGLCKEEGELVAMRLLANPRSIPSLQSLAADGSLRARRKADALLRLL 683          
BLAST of rna-KK1_019888 vs. DB:Swiss
Match: PUB12_ARATH (U-box domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=PUB12 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.233e-31
Identity = 83/291 (28.52%), Postives = 135/291 (46.39%), Query Frame = 1
Query:  199 VLQHCSECSKLYLAITGDSVLLKFEKAKCALEDSLKRVEDIVPQSIGCQIDEIVNELASTVFAL---------DPIEKQVGDDLIALLQQGRKFSDSNDCNELECFHLTATRIGITSSRAALTERRCLKKLIDRARAEEDKRKESIIAFLLHLMRKYSKLFRSEFSDDNDSQGSTPCSPTDGIPGGHFDRQLSKLSSFNFKPNNRKSGQMLLPPEELRCPISLQLMNDPVIIASGQTYERVCIEKWFRDGHNTCPKTQQKLSHLSLTPNYCVKGLVASWCEQNGVPIPEGP 1044
            +L   S  SK+YL +  D V++KF+K    LE +L     I+P       DE+  ++   +  L         D  + ++  D+++L      +S      E +     A ++ + +      E   L  ++  +  ++       ++ +L  ++ + + +     D        P      +P    D +                  ML+PPEE RCPISL+LM DPVI++SGQTYER CI+KW   GH TCPKTQ+ L+   +TPNY ++ L+A WCE NG+  P+ P
Sbjct:   78 LLSFVSHVSKIYLVLERDQVMVKFQKVTSLLEQALS----IIPYENLEISDELKEQVELVLVQLRRSLGKRGGDVYDDELYKDVLSL------YSGRGSVMESDMVRRVAEKLQLMTITDLTQESLALLDMVSSSGGDDPGESFEKMSMVLKKIKDFVQTYNPNLDD-------APLRLKSSLPKSRDDDR-----------------DMLIPPEEFRCPISLELMTDPVIVSSGQTYERECIKKWLEGGHLTCPKTQETLTSDIMTPNYVLRSLIAQWCESNGIEPPKRP 334          

HSP 2 Score: 77.7962 bits (190), Expect = 2.067e-13
Identity = 65/273 (23.81%), Postives = 137/273 (50.18%), Query Frame = 1
Query: 1309 QLRRVLRDDEEARIFMGANGFVEAFMQFLQSAMHEGDVMALDNGAMALFNLAVNNNRNKEIMISAGILSLLEEMNSKSS--SYGCAAALYLNLSCLEEAKRVIGTSQAVQFLIQILHAETEVLCKLDSLHALYNLSTVPDNIPNLLSSGIVNGLQTLFVSQGDSTWTEKCIAVLINLAVSQEGREEIMLAPGLISALASTLDTGEPLEQEQAASCLLILCNRSEKCCELVLQEGVIPALVSISVNGTSRGREKSQKLLMLFRE--QRQREHSA 2115
            ++R + + +   R+ + A+G +   +  L  +    D    ++   ++ NL++      +I+ S+G +  +  +  K S  +   AAA   +LS ++E K  IG + A+  L+ +L +E     K D+  AL+NL     N    + +G+V  L  L  ++ +S   ++ +++L  L+   +G+ E+  A   +  L   + +G P  +E +A+ L+ LC+ +++      + G++  L+ ++ NGT RG+ K+ +LL  F     +Q++HS 
Sbjct:  378 EIRLLAKQNNHNRVAIAASGAIPLLVNLLTIS---NDSRTQEHAVTSILNLSICQENKGKIVYSSGAVPGIVHVLQKGSMEARENAAATLFSLSVIDENKVTIGAAGAIPPLVTLL-SEGSQRGKKDAATALFNLCIFQGNKGKAVRAGLVPVLMRLL-TEPESGMVDESLSILAILSSHPDGKSEVGAADA-VPVLVDFIRSGSPRNKENSAAVLVHLCSWNQQHLIEAQKLGIMDLLIEMAENGTDRGKRKAAQLLNRFSRFNDQQKQHSG 644          
The following BLAST results are available for this feature:
BLAST of rna-KK1_019888 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: C. cajan Asha genome v1.0 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
PUB6_ARATH0.000e+065.76U-box domain-containing protein 6 OS=Arabidopsis t... [more]
PUB7_ARATH0.000e+065.64U-box domain-containing protein 7 OS=Arabidopsis t... [more]
PUB45_ARATH0.000e+065.59U-box domain-containing protein 45 OS=Arabidopsis ... [more]
PUB13_ARATH7.841e-4925.67U-box domain-containing protein 13 OS=Arabidopsis ... [more]
PUB12_ORYSJ2.605e-4630.54U-box domain-containing protein 12 OS=Oryza sativa... [more]
PUB10_ARATH4.894e-4227.51U-box domain-containing protein 10 OS=Arabidopsis ... [more]
PUB11_ARATH6.556e-4228.08U-box domain-containing protein 11 OS=Arabidopsis ... [more]
PUB14_ARATH1.037e-4130.30U-box domain-containing protein 14 OS=Arabidopsis ... [more]
PUB1_MEDTR4.112e-3626.01U-box domain-containing protein 1 OS=Medicago trun... [more]
PUB12_ARATH1.233e-3128.52U-box domain-containing protein 12 OS=Arabidopsis ... [more]
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InterPro
Analysis Name: Cajanus cajan Asha genome v1.0
Date Performed: 2019-09-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003613U box domainSMARTSM00504Ubox_2coord: 273..336
e-value: 2.5E-34
score: 130.1
IPR003613U box domainPFAMPF04564U-boxcoord: 271..340
e-value: 4.4E-19
score: 68.4
IPR003613U box domainPROSITEPS51698U_BOXcoord: 269..343
score: 43.576
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 413..706
e-value: 8.2E-28
score: 99.2
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 270..343
e-value: 6.5E-28
score: 98.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 701..720
NoneNo IPR availableCDDcd16664RING-Ubox_PUBcoord: 274..316
e-value: 1.94864E-25
score: 96.919
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 267..345
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 456..502
score: 9.012
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 418..695

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-KK1_019888_Cc_Asha_v1.0 ID=rna-KK1_019888_Cc_Asha_v1.0; Name=rna-KK1_019888; organism=Cajanus cajan; type=mRNA; length=2268bp
ATGGATGTTGCTGAGCTCGAAGAAAATCTTTTTGCAGCAGGCGATGCCAA
GTTACATGGAGAAATGTGCAAGTGTCTTTCTGCAATATACTGCAAGATAT
TGTCATTGTTTCCTTCTTTAGAAGCCGCTAGGCCTAGGAGCAAATCTGGA
ATTCAGGCATTATGTTCATTGCATGTTGCCTTAGAAAAGGCAAAGAATGT
TCTTCAGCACTGCTCAGAGTGTAGTAAACTTTACCTGGCTATAACTGGGG
ATTCTGTTCTTCTAAAATTTGAGAAGGCTAAATGTGCTCTTGAGGATAGT
CTTAAACGAGTGGAAGATATTGTTCCTCAGTCAATTGGTTGTCAGATTGA
CGAAATTGTAAATGAACTTGCAAGTACCGTATTTGCACTTGATCCTATAG
AAAAGCAAGTTGGCGATGATTTAATTGCATTGCTTCAGCAGGGAAGAAAG
TTTAGTGACTCTAATGACTGTAATGAACTCGAATGTTTTCATCTAACTGC
TACTAGAATTGGAATCACCTCTTCAAGAGCAGCTCTTACAGAAAGAAGAT
GTCTAAAGAAACTCATTGATAGGGCTCGGGCTGAGGAAGACAAGCGAAAA
GAATCAATTATTGCTTTTCTTTTACACCTTATGAGGAAATATTCCAAGTT
ATTTAGAAGTGAGTTCTCTGATGATAATGATTCTCAGGGTTCTACACCTT
GTTCTCCCACTGATGGCATTCCTGGTGGTCATTTTGACAGACAGCTTTCA
AAACTTAGTTCCTTTAATTTTAAGCCAAATAATAGGAAATCAGGGCAGAT
GCTCCTTCCACCCGAAGAGTTAAGGTGCCCAATATCTCTGCAACTTATGA
ATGATCCTGTTATAATTGCTTCTGGGCAAACATACGAAAGGGTTTGTATA
GAGAAATGGTTCAGAGATGGGCACAATACCTGCCCAAAGACTCAACAGAA
ACTTTCACATCTTTCCTTAACACCTAATTACTGTGTTAAAGGTCTTGTGG
CTAGTTGGTGTGAACAGAATGGTGTTCCTATTCCCGAAGGCCCTCCTGAA
TCTCTTGATTATCACTACTGGAGATTGGCATTATCAGATTCTGAATCCAC
AAATTCAAGATCTGTAAACAGTGTTGGCTCTTGCAAATTGAAGAGTGTCA
AAGTTGTTCCCGTAGAAGAGAGTGGTATCTCAGAGCAAACAGAGGAAACC
ATAACTGAAAGTTTTTCTACAAAAGAGGAAGGTAATGAACAGTATCTTGG
TTTTCTTAATTTCTTGACAGAAGGGAACAATTGGAAGAGGAAGTGTAAAG
TGGTGGAACAGTTGAGGCGTGTGCTGCGGGATGACGAGGAAGCCAGGATT
TTTATGGGGGCTAATGGATTTGTGGAAGCATTTATGCAGTTTCTGCAATC
AGCTATGCATGAAGGGGATGTGATGGCTCTTGACAATGGAGCTATGGCTC
TGTTCAACCTGGCTGTGAATAACAACAGAAATAAGGAAATTATGATATCA
GCAGGAATCTTATCGTTGTTGGAGGAAATGAATTCAAAATCTAGTTCCTA
TGGTTGTGCAGCTGCCCTGTATCTGAATCTTTCTTGCCTTGAAGAAGCCA
AGCGTGTGATTGGCACGAGTCAGGCTGTCCAGTTCCTAATCCAGATTCTT
CATGCCGAGACAGAAGTCCTGTGCAAGCTAGATTCCCTCCATGCACTCTA
TAATCTTTCTACTGTGCCAGACAATATTCCAAACCTCCTTTCATCTGGCA
TCGTTAATGGCCTACAAACCCTTTTTGTAAGCCAGGGTGATAGCACGTGG
ACAGAAAAATGCATAGCTGTTTTGATAAATTTGGCTGTTTCTCAAGAAGG
GAGAGAGGAAATAATGTTGGCTCCTGGACTCATAAGCGCCTTGGCTTCCA
CACTGGATACTGGTGAGCCCTTAGAGCAAGAGCAAGCTGCCTCTTGTCTC
CTAATTTTATGTAACAGGAGTGAGAAATGCTGTGAGTTGGTTCTGCAAGA
AGGGGTTATACCTGCATTGGTGTCGATATCGGTGAATGGAACCTCGAGAG
GGAGAGAGAAATCTCAGAAGCTTTTGATGCTCTTCCGGGAGCAGCGACAA
AGAGAGCATTCAGCTGCTAAGACAGATGAAGGTGAATCTGAAAGTAGTGA
TTTGTCTATGCTTCCTGAAACGAAACCGCTATGTAAATCAATATCTAGAA
GAAAGGCAGTGGGGAAAGCTTTTAGCTTTCTCTGGAAAAGCAAGAGCTAT
TCTGTTTCCCAGTGTTAA
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protein sequence of rna-KK1_019888_Cc_Asha_v1.0

>rna-KK1_019888_Cc_Asha_v1.0 ID=rna-KK1_019888_Cc_Asha_v1.0; Name=rna-KK1_019888_Cc_Asha_v1.0; organism=Cajanus cajan; type=polypeptide; length=755bp
MDVAELEENLFAAGDAKLHGEMCKCLSAIYCKILSLFPSLEAARPRSKSG
IQALCSLHVALEKAKNVLQHCSECSKLYLAITGDSVLLKFEKAKCALEDS
LKRVEDIVPQSIGCQIDEIVNELASTVFALDPIEKQVGDDLIALLQQGRK
FSDSNDCNELECFHLTATRIGITSSRAALTERRCLKKLIDRARAEEDKRK
ESIIAFLLHLMRKYSKLFRSEFSDDNDSQGSTPCSPTDGIPGGHFDRQLS
KLSSFNFKPNNRKSGQMLLPPEELRCPISLQLMNDPVIIASGQTYERVCI
EKWFRDGHNTCPKTQQKLSHLSLTPNYCVKGLVASWCEQNGVPIPEGPPE
SLDYHYWRLALSDSESTNSRSVNSVGSCKLKSVKVVPVEESGISEQTEET
ITESFSTKEEGNEQYLGFLNFLTEGNNWKRKCKVVEQLRRVLRDDEEARI
FMGANGFVEAFMQFLQSAMHEGDVMALDNGAMALFNLAVNNNRNKEIMIS
AGILSLLEEMNSKSSSYGCAAALYLNLSCLEEAKRVIGTSQAVQFLIQIL
HAETEVLCKLDSLHALYNLSTVPDNIPNLLSSGIVNGLQTLFVSQGDSTW
TEKCIAVLINLAVSQEGREEIMLAPGLISALASTLDTGEPLEQEQAASCL
LILCNRSEKCCELVLQEGVIPALVSISVNGTSRGREKSQKLLMLFREQRQ
REHSAAKTDEGESESSDLSMLPETKPLCKSISRRKAVGKAFSFLWKSKSY
SVSQC
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mRNA from alignment at Chr_1-CM003603.1:1560356..1564234+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-KK1_019888_Cc_Asha_v1.0 ID=rna-KK1_019888_Cc_Asha_v1.0; Name=rna-KK1_019888; organism=Cajanus cajan; type=mRNA; length=3879bp; location=Sequence derived from: Chr_1-CM003603.1:1560356..1564234+ (Cajanus cajan
ATGGATGTTGCTGAGCTCGAAGAAAATCTTTTTGCAGCAGGCGATGCCAA GGTATGATGATATATCTTTAGTTATTGTGAGAGCTTTTTTTGGAATTCTA ATGCTTTCATATAGTAAATTAGTATCGTGTAAGAAAAAGTACTTTGAATA TTTGACGTGTTTATGCTAAGGTATAAGTAAGGAGGCAAATTGCTTTTATT TTAGTCGTTTCTTTTGGGTGGGTATAAGCACTGTTTGATGCACATTtgta tgattttcttttatgcGTGTGACTTGTCACTgcttttgtttaagaaaatg tttttaattactggtcaaactaaacaaaaaaagagtatattttGCATTTT CCGTTTTGCCATGCTTTTTATGACCATTGATAAACATTCTGTGCATTTTT TTTGGGAGTGAATTCTCTGGTTTAATCTATCATCTAAccaatatatatct tttttctatTGCAGTTACATGGAGAAATGTGCAAGTGTCTTTCTGCAATA TACTGCAAGATATTGTCATTGTTTCCTTCTTTAGAAGCCGCTAGGCCTAG GAGCAAATCTGGAATTCAGGCATTATGTTCATTGCATGTTGCCTTAGAAA AGGCAAAGAATGTTCTTCAGCACTGCTCAGAGTGTAGTAAACTTTACCTG GTATGATTGTTATTGTACAACTTTAGTTTTATTCTCTGATTTTGTCTCCT GTGTGAGGTGGATTCAATTTACTTTAGCTCTTTGTACATGTTATTTTATG TTGGTTGATAAGGTTATTTGATTTATGATACATTTGTGGAGGATCTTACA TATAACTCCACTTATGATGCAGGCTATAACTGGGGATTCTGTTCTTCTAA AATTTGAGAAGGCTAAATGTGCTCTTGAGGATAGTCTTAAACGAGTGGAA GATATTGTTCCTCAGTCAATTGGTTGTCAGGTGAGAAATTTCAACAATAT GGCTGTATACTgctcttttttaatgttttatttccCCCCCTTTGATTCTA GGTTCATTATAGTTCACTTTTACTCAGCCTTGCTAATTGCTTTTTGAATA TCTGAGCAAAGGGGAGCCTATTTTACAAGTTACATTTATTCTTTACATAA TAATTCAAAGCCATCATGTTATTTGCAATATTCTGAATTTGGCTTTTGTA TCACTCTGACACTTTTATGTAAATGCACATGCACAATGGTACTCTTTTCA TGTCATCATtgacaatatttattttgttcatattttgatatattttttaa attggtaTCTATTCAGATTGACGAAATTGTAAATGAACTTGCAAGTACCG TATTTGCACTTGATCCTATAGAAAAGCAAGTTGGCGATGATTTAATTGCA TTGCTTCAGCAGGGAAGAAAGTTTAGTGACTCTAATGACTGTAATGAACT CGAATGTTTTCATCTAACTGCTACTAGAATTGGAATCACCTCTTCAAGAG CAGCTCTTACAGAAAGAAGATGTCTAAAGAAACTCATTGATAGGGCTCGG GCTGAGGAAGACAAGCGAAAAGAATCAATTATTGCTTTTCTTTTACACCT TATGAGGAAATATTCCAAGTTATTTAGAAGTGAGTTCTCTGATGATAATG ATTCTCAGGGTTCTACACCTTGTTCTCCCACTGTTCACAAATATCTTGAG GATGGCATTCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATC TTGAGGATGGCATTCCTGGTGGTCATTTTGACAGACAGCTTTCAAAACTT AGTTCCTTTAATTTTAAGCCAAATAATAGGAAATCAGGGCAGATGCTCCT TCCACCCGAAGAGTTAAGGTGCCCAATATCTCTGCAACTTATGAATGATC CTGTTATAATTGCTTCTGGGCAAACATACGAAAGGGTTTGTATAGAGAAA TGGTTCAGAGATGGGCACAATACCTGCCCAAAGACTCAACAGAAACTTTC ACATCTTTCCTTAACACCTAATTACTGTGTTAAAGGTCTTGTGGCTAGTT GGTGTGAACAGAATGGTGTTCCTATTCCCGAAGGCCCTCCTGAATCTCTT GATTATCACTACTGGAGATTGGCATTATCAGATTCTGAATCCACAAATTC AAGATCTGTAAACAGTGTTGGCTCTTGCAAATTGAAGAGTGTCAAAGTTG TTCCCGTAGAAGAGAGTGGTATCTCAGAGCAAACAGAGGAAACCATAACT GAAAGTTTTTCTACAAAAGAGGAAGGTAATGAACAGTATCTTggttttct taatttcttgaCAGAAGGGAACAATTGGAAGAGGAAGTGTAAAGTGGTGG AACAGTTGAGGCGTGTGCTGCGGGATGACGAGGAAGCCAGGATTTTTATG GGGGCTAATGGATTTGTGGAAGCATTTATGCAGTTTCTGCAATCAGCTAT GCATGAAGGGGATGTGATGGCTCTTGACAATGGAGCTATGGCTCTGTTCA ACCTGGCTGTGAATAACAACAGGTATGCGTTAAATTGTAATGTAAAACTG CTTTTCACATGATTCCAAAATTATACAAGTTATTGTTATTTGAAAATTGA CACCTTTCATTTATCCAATGCCATAATTACTTTGTTATCTTCTGGTTAAA AATATCTTCATTGTCACAATGATCAACTTCTCATCCTTACCTCTTAAAGA GTCTTAACATGTATCAGCTTCTGTCATTTTTGGTTGACGGCCTGTATGTC GGAAAAGTACAGTGGTATTGGTCCAGCAAAtccttttaagttttatttgg aaaataattttcaaaaataatttttctggtTTGTTTGAAGCATCTTTATG ATTATTTTCCTAAAGAAAAGTTCTTATAgtagaaaagacagaagactTGC ATAGTGCACTAGTGGTTGTTGACAATTGATACCGTCCATGTTGAATTACA ccctttattttatatgttgcaACTGATACTGTTCATTAACTGTTTCTGAA TCGTCTCAGtgattacttttttcttttgttttccattttatttgGTAAAT CATCATTAACACAAGCCTGATCCTTTTCTTCTTCAACAGAAATAAGGAAA TTATGATATCAGCAGGAATCTTATCGTTGTTGGAGGAAATGAATTCAAAA TCTAGTTCCTATGGTTGTGCAGCTGCCCTGTATCTGAATCTTTCTTGCCT TGAAGAAGCCAAGCGTGTGATTGGCACGAGTCAGGCTGTCCAGTTCCTAA TCCAGATTCTTCATGCCGAGACAGAAGTCCTGTGCAAGCTAGATTCCCTC CATGCACTCTATAATCTTTCTACTGTGCCAGACAATATTCCAAACCTCCT TTCATCTGGCATCGTTAATGGCCTACAAACCCTTTTTGTAAGCCAGGGTG ATAGCACGTGGACAGAAAAATGCATAGCTGTTTTGATAAATTTGGCTGTT TCTCAAGAAGGGAGAGAGGAAATAATGTTGGCTCCTGGACTCATAAGCGC CTTGGCTTCCACACTGGATACTGGTGagcccttagagcaagagcaaGCTG CCTCTTGTCTCCTAATTTTATGTAACAGGAGTGAGAAATGCTGTGAGTTG GTTCTGCAAGAAGGGGTTATACCTGCATTGGTGTCGATATCGGTGAATGG AACCtcgagagggagagagaaatcTCAGAAGCTTTTGATGCTCTTCCGGG AGCAGCGACAAAGAGAGCATTCAGCTGCTAAGACAGATGAAGGTGAATCT GAAAGTAGTGATTTGTCTATGCTTCCTGAAACGAAACCGCTATGTAAATC AATATCTAGAAGAAAGGCAGTGGGGAAAGCTTTTAGCTTTCTCTGGAAAA GCAAGAGCTATTCTGTTTCCCAGTGTTAA
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Coding sequence (CDS) from alignment at Chr_1-CM003603.1:1560356..1564234+

>rna-KK1_019888_Cc_Asha_v1.0 ID=rna-KK1_019888_Cc_Asha_v1.0; Name=rna-KK1_019888; organism=Cajanus cajan; type=CDS; length=4536bp; location=Sequence derived from: Chr_1-CM003603.1:1560356..1564234+ (Cajanus cajan
ATGGATGTTGCTGAGCTCGAAGAAAATCTTTTTGCAGCAGGCGATGCCAA
GATGGATGTTGCTGAGCTCGAAGAAAATCTTTTTGCAGCAGGCGATGCCA
AGTTACATGGAGAAATGTGCAAGTGTCTTTCTGCAATATACTGCAAGATA
TTGTCATTGTTTCCTTCTTTAGAAGCCGCTAGGCCTAGGAGCAAATCTGG
AATTCAGGCATTATGTTCATTGCATGTTGCCTTAGAAAAGGCAAAGAATG
TTCTTCAGCACTGCTCAGAGTGTAGTAAACTTTACCTGTTACATGGAGAA
ATGTGCAAGTGTCTTTCTGCAATATACTGCAAGATATTGTCATTGTTTCC
TTCTTTAGAAGCCGCTAGGCCTAGGAGCAAATCTGGAATTCAGGCATTAT
GTTCATTGCATGTTGCCTTAGAAAAGGCAAAGAATGTTCTTCAGCACTGC
TCAGAGTGTAGTAAACTTTACCTGGCTATAACTGGGGATTCTGTTCTTCT
AAAATTTGAGAAGGCTAAATGTGCTCTTGAGGATAGTCTTAAACGAGTGG
AAGATATTGTTCCTCAGTCAATTGGTTGTCAGGCTATAACTGGGGATTCT
GTTCTTCTAAAATTTGAGAAGGCTAAATGTGCTCTTGAGGATAGTCTTAA
ACGAGTGGAAGATATTGTTCCTCAGTCAATTGGTTGTCAGATTGACGAAA
TTGTAAATGAACTTGCAAGTACCGTATTTGCACTTGATCCTATAGAAAAG
CAAGTTGGCGATGATTTAATTGCATTGCTTCAGCAGGGAAGAAAGTTTAG
TGACTCTAATGACTGTAATGAACTCGAATGTTTTCATCTAACTGCTACTA
GAATTGGAATCACCTCTTCAAGAGCAGCTCTTACAGAAAGAAGATGTCTA
AAGAAACTCATTGATAGGGCTCGGGCTGAGGAAGACAAGCGAAAAGAATC
AATTATTGCTTTTCTTTTACACCTTATGAGGAAATATTCCAAGTTATTTA
GAAGTGAGTTCTCTGATGATAATGATTCTCAGGGTTCTACACCTTGTTCT
CCCACTATTGACGAAATTGTAAATGAACTTGCAAGTACCGTATTTGCACT
TGATCCTATAGAAAAGCAAGTTGGCGATGATTTAATTGCATTGCTTCAGC
AGGGAAGAAAGTTTAGTGACTCTAATGACTGTAATGAACTCGAATGTTTT
CATCTAACTGCTACTAGAATTGGAATCACCTCTTCAAGAGCAGCTCTTAC
AGAAAGAAGATGTCTAAAGAAACTCATTGATAGGGCTCGGGCTGAGGAAG
ACAAGCGAAAAGAATCAATTATTGCTTTTCTTTTACACCTTATGAGGAAA
TATTCCAAGTTATTTAGAAGTGAGTTCTCTGATGATAATGATTCTCAGGG
TTCTACACCTTGTTCTCCCACTGATGGCATTCCTGGTGGTCATTTTGACA
GACAGCTTTCAAAACTTAGTTCCTTTAATTTTAAGCCAAATAATAGGAAA
TCAGGGCAGATGCTCCTTCCACCCGAAGAGTTAAGGTGCCCAATATCTCT
GCAACTTATGAATGATCCTGTTATAATTGCTTCTGGGCAAACATACGAAA
GGGTTTGTATAGAGAAATGGTTCAGAGATGGGCACAATACCTGCCCAAAG
ACTCAACAGAAACTTTCACATCTTTCCTTAACACCTAATTACTGTGTTAA
AGGTCTTGTGGCTAGTTGGTGTGAACAGAATGGTGTTCCTATTCCCGAAG
GCCCTCCTGAATCTCTTGATTATCACTACTGGAGATTGGCATTATCAGAT
TCTGAATCCACAAATTCAAGATCTGTAAACAGTGTTGGCTCTTGCAAATT
GAAGAGTGTCAAAGTTGTTCCCGTAGAAGAGAGTGGTATCTCAGAGCAAA
CAGAGGAAACCATAACTGAAAGTTTTTCTACAAAAGAGGAAGGTAATGAA
CAGTATCTTggttttcttaatttcttgaCAGAAGGGAACAATTGGAAGAG
GAAGTGTAAAGTGGTGGAACAGTTGAGGCGTGTGCTGCGGGATGACGAGG
AAGCCAGGATTTTTATGGGGGCTAATGGATTTGTGGAAGCATTTATGCAG
TTTCTGCAATCAGCTATGCATGAAGGGGATGTGATGGCTCTTGACAATGG
AGCTATGGCTCTGTTCAACCTGGCTGTGAATAACAACAGGATGGCATTCC
TGGTGGTCATTTTGACAGACAGCTTTCAAAACTTAGTTCCTTTAATTTTA
AGCCAAATAATAGGAAATCAGGGCAGATGCTCCTTCCACCCGAAGAGTTA
AGGTGCCCAATATCTCTGCAACTTATGAATGATCCTGTTATAATTGCTTC
TGGGCAAACATACGAAAGGGTTTGTATAGAGAAATGGTTCAGAGATGGGC
ACAATACCTGCCCAAAGACTCAACAGAAACTTTCACATCTTTCCTTAACA
CCTAATTACTGTGTTAAAGGTCTTGTGGCTAGTTGGTGTGAACAGAATGG
TGTTCCTATTCCCGAAGGCCCTCCTGAATCTCTTGATTATCACTACTGGA
GATTGGCATTATCAGATTCTGAATCCACAAATTCAAGATCTGTAAACAGT
GTTGGCTCTTGCAAATTGAAGAGTGTCAAAGTTGTTCCCGTAGAAGAGAG
TGGTATCTCAGAGCAAACAGAGGAAACCATAACTGAAAGTTTTTCTACAA
AAGAGGAAGGTAATGAACAGTATCTTggttttcttaatttcttgaCAGAA
GGGAACAATTGGAAGAGGAAGTGTAAAGTGGTGGAACAGTTGAGGCGTGT
GCTGCGGGATGACGAGGAAGCCAGGATTTTTATGGGGGCTAATGGATTTG
TGGAAGCATTTATGCAGTTTCTGCAATCAGCTATGCATGAAGGGGATGTG
ATGGCTCTTGACAATGGAGCTATGGCTCTGTTCAACCTGGCTGTGAATAA
CAACAGAAATAAGGAAATTATGATATCAGCAGGAATCTTATCGTTGTTGG
AGGAAATGAATTCAAAATCTAGTTCCTATGGTTGTGCAGCTGCCCTGTAT
CTGAATCTTTCTTGCCTTGAAGAAGCCAAGCGTGTGATTGGCACGAGTCA
GGCTGTCCAGTTCCTAATCCAGATTCTTCATGCCGAGACAGAAGTCCTGT
GCAAGCTAGATTCCCTCCATGCACTCTATAATCTTTCTACTGTGCCAGAC
AATATTCCAAACCTCCTTTCATCTGGCATCGTTAATGGCCTACAAACCCT
TTTTGTAAGCCAGGGTGATAGCACGTGGACAGAAAAATGCATAGCTGTTT
TGATAAATTTGGCTGTTTCTCAAGAAGGGAGAGAGGAAATAATGTTGGCT
CCTGGACTCATAAGCGCCTTGGCTTCCACACTGGATACTGGTGagccctt
agagcaagagcaaGCTGCCTCTTGTCTCCTAATTTTATGTAACAGGAGTG
AGAAATGCTGTGAGTTGGTTCTGCAAGAAGGGGTTATACCTGCATTGGTG
TCGATATCGGTGAATGGAACCtcgagagggagagagaaatcTCAGAAGCT
TTTGATGCTCTTCCGGGAGCAGCGACAAAGAGAGCATTCAGCTGCTAAGA
CAGATGAAGGTGAATCTGAAAGTAGTGATTTGTCTATGCTTCCTGAAACG
AAACCGCTATGTAAATCAATATCTAGAAGAAAGGCAGTGGGGAAAGCTTT
TAGCTTTCTCTGGAAAAGCAAGAGCTATTCTGTTTCCCAGTGTTAAAAAT
AAGGAAATTATGATATCAGCAGGAATCTTATCGTTGTTGGAGGAAATGAA
TTCAAAATCTAGTTCCTATGGTTGTGCAGCTGCCCTGTATCTGAATCTTT
CTTGCCTTGAAGAAGCCAAGCGTGTGATTGGCACGAGTCAGGCTGTCCAG
TTCCTAATCCAGATTCTTCATGCCGAGACAGAAGTCCTGTGCAAGCTAGA
TTCCCTCCATGCACTCTATAATCTTTCTACTGTGCCAGACAATATTCCAA
ACCTCCTTTCATCTGGCATCGTTAATGGCCTACAAACCCTTTTTGTAAGC
CAGGGTGATAGCACGTGGACAGAAAAATGCATAGCTGTTTTGATAAATTT
GGCTGTTTCTCAAGAAGGGAGAGAGGAAATAATGTTGGCTCCTGGACTCA
TAAGCGCCTTGGCTTCCACACTGGATACTGGTGagcccttagagcaagag
caaGCTGCCTCTTGTCTCCTAATTTTATGTAACAGGAGTGAGAAATGCTG
TGAGTTGGTTCTGCAAGAAGGGGTTATACCTGCATTGGTGTCGATATCGG
TGAATGGAACCtcgagagggagagagaaatcTCAGAAGCTTTTGATGCTC
TTCCGGGAGCAGCGACAAAGAGAGCATTCAGCTGCTAAGACAGATGAAGG
TGAATCTGAAAGTAGTGATTTGTCTATGCTTCCTGAAACGAAACCGCTAT
GTAAATCAATATCTAGAAGAAAGGCAGTGGGGAAAGCTTTTAGCTTTCTC
TGGAAAAGCAAGAGCTATTCTGTTTCCCAGTGTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR003613Ubox_domain
IPR011989ARM-like
IPR013083Znf_RING/FYVE/PHD
IPR000225Armadillo
IPR016024ARM-type_fold
Vocabulary: Molecular Function
TermDefinition
GO:0004842ubiquitin-protein transferase activity
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0016567protein ubiquitination