rna-KK1_019937
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of rna-KK1_019937 vs. DB:Swiss
Match: PLY5_ARATH (Probable pectate lyase 5 OS=Arabidopsis thaliana OX=3702 GN=At1g67750 PE=2 SV=2) HSP 1 Score: 622.083 bits (1603), Expect = 0.000e+0 Identity = 313/367 (85.29%), Postives = 338/367 (92.10%), Query Frame = 1 Query: 43 RSINASRRNLAFLSCGTGNPIDDCWRCDPSWEKNRKRLADCSIGFGKHAIGGRDGKIYVVTDPGDHPV-NPKPGTLRYGVIQEEPLWIIFKRDMVIKLKQELMMNSFKTIDGRGASVHIAGGPCITIQFVTNIIIHGINIHDCKRGGNAYVRDSPTHYGWRTLSDGDGVSIFGGSHVWVDHCSLSNCRDGLIDAIHGSTAITISNNYMTHHNKVMLLGHSDTFSRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTQWKMYAIGGSAAPTINSQGNRFLAPNDHTFKEVTKRENAGESKWKNWNWRSTGDLMLNGXXXXXXXXXXXXXXXXXXXXXXKPSSLVSSITASAGSLRCRKGSRC 1140
INASRRNL LSCGTGNPIDDCWRCDP WEKNR+RLADC+IGFGKHAIGGRDGKIYVVTD D V NPKPGTLR+ VIQ+EPLWIIF RDMVIKLK+EL+MNSFKTIDGRGASVHIAGG CIT+Q+VTNIIIHG+NIHDCKR GNAYVRDSP+HYGWRT SDGD VSIFGGSHVWVDHCSLSNC DGLIDAIHGSTAITISNNY++HHNKVMLLGHSD+++RDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYT W+MYAIGGSAAPTINSQGNRFLAPNDH FKEVTK E+A SKWK WNWRS GDL LNGAFF SG GASSSYA+ASSL+A+PSSLV+S+T++AG+L CRKGSRC
Sbjct: 42 EKINASRRNLGVLSCGTGNPIDDCWRCDPKWEKNRQRLADCAIGFGKHAIGGRDGKIYVVTDSSDKDVVNPKPGTLRHAVIQDEPLWIIFARDMVIKLKEELIMNSFKTIDGRGASVHIAGGACITVQYVTNIIIHGVNIHDCKRKGNAYVRDSPSHYGWRTASDGDAVSIFGGSHVWVDHCSLSNCADGLIDAIHGSTAITISNNYLSHHNKVMLLGHSDSYTRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWQMYAIGGSAAPTINSQGNRFLAPNDHVFKEVTKYEDAPRSKWKKWNWRSEGDLFLNGAFFTPSGGGASSSYAKASSLSARPSSLVASVTSNAGALFCRKGSRC 408
BLAST of rna-KK1_019937 vs. DB:Swiss
Match: PLY22_ARATH (Probable pectate lyase 22 OS=Arabidopsis thaliana OX=3702 GN=At5g63180 PE=2 SV=1) HSP 1 Score: 590.112 bits (1520), Expect = 0.000e+0 Identity = 298/371 (80.32%), Postives = 332/371 (89.49%), Query Frame = 1 Query: 43 RSINAS--RRNLAFLSCGTGNPIDDCWRCDPSWEKNRKRLADCSIGFGKHAIGGRDGKIYVVTDPG-DHPVNPKPGTLRYGVIQEEPLWIIFKRDMVIKLKQELMMNSFKTIDGRGASVHIAGGPCITIQFVTNIIIHGINIHDCKRGGNAYVRDSPTHYGWRTLSDGDGVSIFGGSHVWVDHCSLSNCRDGLIDAIHGSTAITISNNYMTHHNKVMLLGHSDTFSRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTQWKMYAIGGSAAPTINSQGNRFLAPNDHTFKEVTKRENAGESKWKNWNWRSTGDLMLNGXXXXXXXX--XXXXXXXXXXXXXXKPSSLVSSITASAGSLRCRKGSRC 1140
R IN S RR L F SCG+GNPIDDCWRCD WEKNRKRLADC IGFGK+AIGGRDG+IYVVTDPG D PVNP+PGTLRY VIQ+EPLWIIFKRDM I+LK+EL+MNSFKT+DGRGASVHI+GGPCITIQ+VTNIIIHG++IHDCK+GGN YVRDSP HYG+RT+SDGDGVSIFGGSHVWVDHCSLSNC DGLIDAI GSTAITISNNY+THHNKVMLLGHSDT+ +DKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYT W+MYAIGGSA PTINSQGNRFLAP+D + KEVTK E+A E +W+NWNWRS GDL+LNGAFF SGA SSSY++ASSLAA+PSS V IT ++G+L C++GS C
Sbjct: 62 RKINESISRRKLGFFSCGSGNPIDDCWRCDKDWEKNRKRLADCGIGFGKNAIGGRDGEIYVVTDPGNDDPVNPRPGTLRYAVIQDEPLWIIFKRDMTIQLKEELIMNSFKTLDGRGASVHISGGPCITIQYVTNIIIHGLHIHDCKQGGNTYVRDSPEHYGYRTVSDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIRGSTAITISNNYLTHHNKVMLLGHSDTYEQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPDDSSSKEVTKHEDAPEDEWRNWNWRSEGDLLLNGAFFTYSGAGPAKSSSYSKASSLAARPSSHVGEITIASGALSCKRGSHC 432
BLAST of rna-KK1_019937 vs. DB:Swiss
Match: PLY18_ARATH (Probable pectate lyase 18 OS=Arabidopsis thaliana OX=3702 GN=At4g24780 PE=2 SV=2) HSP 1 Score: 571.237 bits (1471), Expect = 0.000e+0 Identity = 298/370 (80.54%), Postives = 336/370 (90.81%), Query Frame = 1 Query: 43 RSINAS---RRNLAFLSCGTGNPIDDCWRCDPSWEKNRKRLADCSIGFGKHAIGGRDGKIYVVTDPG-DHPVNPKPGTLRYGVIQEEPLWIIFKRDMVIKLKQELMMNSFKTIDGRGASVHIAGGPCITIQFVTNIIIHGINIHDCKRGGNAYVRDSPTHYGWRTLSDGDGVSIFGGSHVWVDHCSLSNCRDGLIDAIHGSTAITISNNYMTHHNKVMLLGHSDTFSRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTQWKMYAIGGSAAPTINSQGNRFLAPNDHTFKEVTKRENAGESKWKNWNWRSTGDLMLNGXXXXXXXXXXXXXXXXXXXXXXKPSSLVSSITASAGSLRCRKGSRC 1140
+SINAS RR L +LSC TGNPIDDCWRCDP WE++R+RLADC+IGFGK+AIGGRDG+IYVVTD G D+PV+PKPGTLR+ V+Q+EPLWIIF+RDM I+LK+EL+MNSFKTIDGRGASVHI+GGPCITIQ+VTNIIIHGI+IHDCK+GGNA VR SP H+GWRT+SDGDGVSIFGGSHVWVDHCS SNC DGLIDAI GSTAIT+SNN+MTHH+KVMLLGHSDT+SRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYT W+MYAIGGSA PTINSQGNRFLAPN KEVTK E+A ES+WK WNWRS+GDL+LNGAFF SG ASSSYA+ASSL AKPSSLV +T+++G+L CRKGSRC
Sbjct: 39 KSINASVAGRRKLGYLSCTTGNPIDDCWRCDPHWEQHRQRLADCAIGFGKNAIGGRDGRIYVVTDSGNDNPVSPKPGTLRHAVVQDEPLWIIFQRDMTIQLKEELIMNSFKTIDGRGASVHISGGPCITIQYVTNIIIHGIHIHDCKQGGNAMVRSSPRHFGWRTISDGDGVSIFGGSHVWVDHCSFSNCEDGLIDAIMGSTAITLSNNHMTHHDKVMLLGHSDTYSRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPNIRFSKEVTKHEDAPESEWKRWNWRSSGDLLLNGAFFTPSGGAASSSYAKASSLGAKPSSLVGPLTSTSGALNCRKGSRC 408
BLAST of rna-KK1_019937 vs. DB:Swiss
Match: PLY15_ARATH (Probable pectate lyase 15 OS=Arabidopsis thaliana OX=3702 GN=At4g13710 PE=2 SV=1) HSP 1 Score: 555.829 bits (1431), Expect = 0.000e+0 Identity = 273/362 (75.41%), Postives = 316/362 (87.29%), Query Frame = 1 Query: 58 SRRNLAFLSCGTGNPIDDCWRCDPSWEKNRKRLADCSIGFGKHAIGGRDGKIYVVTDPGDHPV-NPKPGTLRYGVIQEEPLWIIFKRDMVIKLKQELMMNSFKTIDGRGASVHIAGGPCITIQFVTNIIIHGINIHDCKRGGNAYVRDSPTHYGWRTLSDGDGVSIFGGSHVWVDHCSLSNCRDGLIDAIHGSTAITISNNYMTHHNKVMLLGHSDTFSRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTQWKMYAIGGSAAPTINSQGNRFLAPNDHTFKEVTKRENAGESKWKNWNWRSTGDLMLNGXXXXXXXXXXXXXXXXXXXXXXKPSSLVSSITASAGSLRCRKGSRC 1140
+RR L F SCGTGNPIDDCWRCD +W KNRKRLADC IGFG++AIGGRDG+ Y+VTDP D V NPKPGTLR+ VIQEEPLWI+FKRDMVI+LKQEL+MNSFKTID RG++VHIA G CITIQF+TN+IIHG++IHDCK GNA VR SP+H+GWRT++DGD VSIFG SH+W+DH SLS+C DGL+DA+ GSTAIT+SNN+ THHN+VMLLGHSD++++DK MQVTIA+NHFGEGLVQRMPRCRHGYFHVVNNDYT W+MYAIGGSA PTINSQGNR+ AP D KEVTKR S+WK WNWRS GDL+LNGAFFR SGAGAS+SY RASSLAAKPSS+V +IT++AG+L CRKG C
Sbjct: 109 ARRKLGFFSCGTGNPIDDCWRCDRNWHKNRKRLADCGIGFGRNAIGGRDGRFYIVTDPTDEDVVNPKPGTLRHAVIQEEPLWIVFKRDMVIELKQELIMNSFKTIDARGSNVHIANGACITIQFITNVIIHGLHIHDCKPTGNAMVRSSPSHFGWRTMADGDAVSIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITVSNNHFTHHNEVMLLGHSDSYTKDKLMQVTIAYNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTINSQGNRYAAPMDRFAKEVTKRVETDASEWKKWNWRSEGDLLLNGAFFRPSGAGASASYGRASSLAAKPSSMVDTITSTAGALGCRKGRPC 470
BLAST of rna-KK1_019937 vs. DB:Swiss
Match: PLY_ZINVI (Pectate lyase OS=Zinnia violacea OX=34245 PE=1 SV=1) HSP 1 Score: 551.977 bits (1421), Expect = 0.000e+0 Identity = 286/367 (77.93%), Postives = 326/367 (88.83%), Query Frame = 1 Query: 43 RSINASRRNLAFLSCGTGNPIDDCWRCDPSWEKNRKRLADCSIGFGKHAIGGRDGKIYVVTDPG-DHPVNPKPGTLRYGVIQEEPLWIIFKRDMVIKLKQELMMNSFKTIDGRGASVHIAGGPCITIQFVTNIIIHGINIHDCKRGGNAYVRDSPTHYGWRTLSDGDGVSIFGGSHVWVDHCSLSNCRDGLIDAIHGSTAITISNNYMTHHNKVMLLGHSDTFSRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTQWKMYAIGGSAAPTINSQGNRFLAPNDHTFKEVTKRENAGESKWKNWNWRSTGDLMLNGXXXXXXXXXXXXXXXXXXXXXXKPSSLVSSITASAGSLRCRKGSRC 1140
+SINASRRNL +LSCGTGNPIDDCWRCDP+W NR+RLADC+IGFGK+A+GGR+G+IYVVTDPG D PVNP PGTLRY VIQ+EPLWIIFKRDMVI+L+QEL+MNS KTIDGRG +VHI GPCITI + +NIIIHGI+IHDCK+ GN +R+SP H GW T SDGDG+SIF +W+DH SLSNC DGLIDAIHGSTAITISNNYMTHH+KVMLLGHSD++++DKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYT W+MYAIGGSA+PTI SQGNRFLAPN KEVTK ENA ES+WKNWNWRS GDLMLNGA+FR SG A+SS+ARASSL+ +PS+LV+S+T SAG+L CRKGSRC
Sbjct: 35 KSINASRRNLGYLSCGTGNPIDDCWRCDPNWANNRQRLADCAIGFGKNAMGGRNGRIYVVTDPGNDDPVNPVPGTLRYAVIQDEPLWIIFKRDMVIQLRQELVMNSHKTIDGRGVNVHIGNGPCITIHYASNIIIHGIHIHDCKQAGNGNIRNSPHHSGWWTQSDGDGISIFASKDIWIDHNSLSNCHDGLIDAIHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTIYSQGNRFLAPNTRFDKEVTKHENAPESEWKNWNWRSEGDLMLNGAYFRESGGRAASSFARASSLSGRPSTLVASMTRSAGALVCRKGSRC 401
BLAST of rna-KK1_019937 vs. DB:Swiss
Match: PLY10_ARATH (Probable pectate lyase 10 OS=Arabidopsis thaliana OX=3702 GN=At3g24670 PE=2 SV=2) HSP 1 Score: 548.125 bits (1411), Expect = 0.000e+0 Identity = 271/364 (74.45%), Postives = 312/364 (85.71%), Query Frame = 1 Query: 52 NASRRNLAFLSCGTGNPIDDCWRCDPSWEKNRKRLADCSIGFGKHAIGGRDGKIYVVTDPGDH-PVNPKPGTLRYGVIQEEPLWIIFKRDMVIKLKQELMMNSFKTIDGRGASVHIAGGPCITIQFVTNIIIHGINIHDCKRGGNAYVRDSPTHYGWRTLSDGDGVSIFGGSHVWVDHCSLSNCRDGLIDAIHGSTAITISNNYMTHHNKVMLLGHSDTFSRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTQWKMYAIGGSAAPTINSQGNRFLAPNDHTFKEVTKRENAGESKWKNWNWRSTGDLMLNGXXXXXXXXXXXXXXXXXXXXXXKPSSLVSSITASAGSLRCRKGSRC 1140
+ RR L F SC TGNPIDDCWRCD +W RKRLA+C+IGFG++AIGGRDG+ YVVTDP DH VNP+PGTLR+ VIQ+ PLWI+FKRDMVI L QEL+MNSFKTIDGRG +V IAGG CITIQ+VTNIIIHGIN+HDC+R GNA VR SP+HYGWRT++DGD +SIFG SH+W+DH SLSNC DGLIDAI GSTAITISNNYMTHHN+VML+GHSD+++RDK MQVTIA+NHFGEGL+QRMPRCRHGYFHVVNNDYT W MYAIGGSA PTINSQGNRFLAP + KEVTKR + + +WK WNWRS GDLMLNGA+F SGA A +SYARASSL AKP+S+VS +T S+G+L+CR G RC
Sbjct: 77 STERRRLGFFSCATGNPIDDCWRCDRNWHLRRKRLANCAIGFGRNAIGGRDGRYYVVTDPSDHDAVNPRPGTLRHAVIQDRPLWIVFKRDMVITLTQELIMNSFKTIDGRGVNVAIAGGACITIQYVTNIIIHGINVHDCRRTGNAMVRSSPSHYGWRTMADGDAISIFGSSHIWIDHNSLSNCADGLIDAIMGSTAITISNNYMTHHNEVMLMGHSDSYTRDKLMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWVMYAIGGSANPTINSQGNRFLAPGNPFAKEVTKRVGSWQGEWKQWNWRSQGDLMLNGAYFTKSGAAAPASYARASSLGAKPASVVSMLTYSSGALKCRIGMRC 440
BLAST of rna-KK1_019937 vs. DB:Swiss
Match: PLY11_ARATH (Putative pectate lyase 11 OS=Arabidopsis thaliana OX=3702 GN=At3g27400 PE=3 SV=2) HSP 1 Score: 543.502 bits (1399), Expect = 0.000e+0 Identity = 281/365 (76.99%), Postives = 320/365 (87.67%), Query Frame = 1 Query: 49 INASRRNLAFLSCGTGNPIDDCWRCDPSWEKNRKRLADCSIGFGKHAIGGRDGKIYVVTDPG-DHPVNPKPGTLRYGVIQEEPLWIIFKRDMVIKLKQELMMNSFKTIDGRGASVHIAGGPCITIQFVTNIIIHGINIHDCKRGGNAYVRDSPTHYGWRTLSDGDGVSIFGGSHVWVDHCSLSNCRDGLIDAIHGSTAITISNNYMTHHNKVMLLGHSDTFSRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTQWKMYAIGGSAAPTINSQGNRFLAPNDHTFKEVTKRENAGESKWKNWNWRSTGDLMLNGXXXXXXXXXXXXXXXXXXXXXXKPSSLVSSITASAGSLRCRKGSRC 1140
NASRR+LA+LSC TGNPIDDCWRCDP+WE NR+RLADC+IGFGK+AIGGR G+IYVVTDP D PVNP+PGTLRY V QEEPLWIIFKRDMVI+LK+EL++ SFKTIDGRG+SVHI GPC+ I + TNIIIHGINIHDCK G ++D P H GW SDGD V+IFGG HVW+DHCSLSNC DGLIDAIHGSTAITISNN+MTHH+KVMLLGHSD++++DKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYT W+MYAIGGSA+PTI SQGNRFLAPN KEVTK E+A ESKW++WNWRS GD++LNGA+FR SGA A S+YARASSL+A+PSSLV SIT +AG+L CR+G RC
Sbjct: 48 FNASRRSLAYLSCRTGNPIDDCWRCDPNWETNRQRLADCAIGFGKNAIGGRKGRIYVVTDPANDDPVNPRPGTLRYAVTQEEPLWIIFKRDMVIRLKKELIITSFKTIDGRGSSVHITDGPCLKIHYATNIIIHGINIHDCKPGSGGMIKDGPHHTGWWMQSDGDAVAIFGGKHVWIDHCSLSNCDDGLIDAIHGSTAITISNNHMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTIYSQGNRFLAPNTRFNKEVTKHEDAPESKWRDWNWRSEGDMLLNGAYFRESGAEAPSTYARASSLSARPSSLVGSITTTAGTLSCRRGRRC 412
BLAST of rna-KK1_019937 vs. DB:Swiss
Match: PLY8_ARATH (Probable pectate lyase 8 OS=Arabidopsis thaliana OX=3702 GN=At3g07010 PE=2 SV=1) HSP 1 Score: 538.88 bits (1387), Expect = 0.000e+0 Identity = 270/364 (74.18%), Postives = 314/364 (86.26%), Query Frame = 1 Query: 52 NASRRNLAFLSCGTGNPIDDCWRCDPSWEKNRKRLADCSIGFGKHAIGGRDGKIYVVTDPGDH-PVNPKPGTLRYGVIQEEPLWIIFKRDMVIKLKQELMMNSFKTIDGRGASVHIAGGPCITIQFVTNIIIHGINIHDCKRGGNAYVRDSPTHYGWRTLSDGDGVSIFGGSHVWVDHCSLSNCRDGLIDAIHGSTAITISNNYMTHHNKVMLLGHSDTFSRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTQWKMYAIGGSAAPTINSQGNRFLAPNDHTFKEVTKRENAGESKWKNWNWRSTGDLMLNGXXXXXXXXXXXXXXXXXXXXXXKPSSLVSSITASAGSLRCRKGSRC 1140
+ RR L + SC TGNPIDDCWRCD W+ RKRLADCSIGFG++AIGGRDG+ YVVTDPGD PVNP PGTLR+ VIQ+EPLWIIFKRDMVI LKQEL+MNSFKTIDGRG +VHIA G C+TIQ+VTNII+HGI++HDCK GNA VR SP+HYG+R+++DGD +SIFG SH+W+DH SLSNC DGL+DA+ STAIT+SNN+ THHN+VMLLGHSD+++RDK MQVTIA+NHFGEGL+QRMPRCRHGYFHVVNNDYT W+MYAIGGSA PTINSQGNRFLAP + KEVTKRE GESKWK+WNWRS GDL LNGAFF SGAGA ++YARASSL+AK SSLV ++T+ +G+L CR G RC
Sbjct: 53 STERRRLGYFSCATGNPIDDCWRCDRKWQLRRKRLADCSIGFGRNAIGGRDGRFYVVTDPGDDDPVNPIPGTLRHAVIQDEPLWIIFKRDMVITLKQELIMNSFKTIDGRGVNVHIANGACLTIQYVTNIIVHGIHVHDCKPTGNAMVRSSPSHYGFRSMADGDAISIFGSSHIWIDHNSLSNCADGLVDAVMSSTAITVSNNFFTHHNEVMLLGHSDSYTRDKVMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAGPTINSQGNRFLAPVNPFAKEVTKREYTGESKWKHWNWRSEGDLFLNGAFFTRSGAGAGANYARASSLSAKSSSLVGTMTSYSGALNCRAGRRC 416
BLAST of rna-KK1_019937 vs. DB:Swiss
Match: PLY1_ARATH (Probable pectate lyase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g04680 PE=2 SV=2) HSP 1 Score: 528.48 bits (1360), Expect = 0.000e+0 Identity = 266/362 (73.48%), Postives = 312/362 (86.19%), Query Frame = 1 Query: 58 SRRNLAFLSCGTGNPIDDCWRCDPSWEKNRKRLADCSIGFGKHAIGGRDGKIYVVTDP-GDHPVNPKPGTLRYGVIQEEPLWIIFKRDMVIKLKQELMMNSFKTIDGRGASVHIAGGPCITIQFVTNIIIHGINIHDCKRGGNAYVRDSPTHYGWRTLSDGDGVSIFGGSHVWVDHCSLSNCRDGLIDAIHGSTAITISNNYMTHHNKVMLLGHSDTFSRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTQWKMYAIGGSAAPTINSQGNRFLAPNDHTFKEVTKRENAGESKWKNWNWRSTGDLMLNGXXXXXXXXXXXXXXXXXXXXXXKPSSLVSSITASAGSLRCRKGSRC 1140
RR L + +CGTGNPIDDCWRCDP+W KNRKRLADC IGFG++AIGGRDG+ YVVTDP D+PVNP+PGTLR+ VIQ+ PLWI+FKRDMVI+LKQEL++NSFKTIDGRGA+VHIA G CITIQFVTN+I+HG++IHDCK GNA VR S TH+GWRT++DGD +SIFG SHVW+DH SLS+C DGL+DA+ GSTAITISNN++THHN+VMLLGHSD++ RDK MQVTIA+NHFG GL+QRMPRCRHGYFHVVNNDYT W+MYAIGGSA PTINSQGNR+ AP + KEVTKR + S WK WNWRS GDL+ NGA+F +SGA AS SYARASSL+AK SSLV IT+ AG+L CR+G +C
Sbjct: 68 ERRKLGYFTCGTGNPIDDCWRCDPNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDNPVNPRPGTLRHAVIQDRPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIVHGLHIHDCKPTGNAMVRSSETHFGWRTMADGDAISIFGSSHVWIDHNSLSHCADGLVDAVMGSTAITISNNHLTHHNEVMLLGHSDSYMRDKAMQVTIAYNHFGVGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYAAPKNPFAKEVTKRVDTPASHWKGWNWRSEGDLLQNGAYFTSSGAAASGSYARASSLSAKSSSLVGHITSDAGALPCRRGRQC 429
BLAST of rna-KK1_019937 vs. DB:Swiss
Match: PLY14_ARATH (Putative pectate lyase 14 OS=Arabidopsis thaliana OX=3702 GN=At4g13210 PE=3 SV=2) HSP 1 Score: 521.161 bits (1341), Expect = 0.000e+0 Identity = 273/362 (75.41%), Postives = 317/362 (87.57%), Query Frame = 1 Query: 61 RRNLAFLS-CGTGNPIDDCWRCDPSWEKNRKRLADCSIGFGKHAIGGRDGKIYVVTDPGDH-PVNPKPGTLRYGVIQEEPLWIIFKRDMVIKLKQELMMNSFKTIDGRGASVHIAGGPCITIQFVTNIIIHGINIHDCKRGGNAYVRDSPTHYGWRTLSDGDGVSIFGGSHVWVDHCSLSNCRDGLIDAIHGSTAITISNNYMTHHNKVMLLGHSDTFSRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTQWKMYAIGGSAAPTINSQGNRFLAPNDHTFKEVTKRENAGESKWKNWNWRSTGDLMLNGXXXXXXXXXXXXXXXXXXXXXXKPSSLVSSITASAGSLRCRKGSRC 1140
RR L F S C TGNPIDDCWRCD W + RKRLADC+IGFG++A+GGRDG+ Y+VTDP DH PV PKPGTLRY VIQ+EPLWI+FKRDMVI L QEL+MNSFKTIDGRG +VHIAGG C+T+Q+VTNIIIHGINIHDCKR GNA VR S +HYGWRT++DGDG+SIFG SH+W+DH SLS+C DGLIDAI GSTAITISNNY+THHN+ +LLGH+D+++RDK MQVTIA+NHFGEGL+QRMPRCRHGYFHVVNNDYT W+MYAIGGSA PTINSQGNRFLAP + KEVTKR AG+ +W NWNWRS GDLMLNGA+F +SGAGAS++YARASSLAAK SSLV +T+S+G+L+CR G+ C
Sbjct: 77 RRKLGFFSSCSTGNPIDDCWRCDKKWHRRRKRLADCAIGFGRNAVGGRDGRYYIVTDPSDHDPVTPKPGTLRYAVIQDEPLWIVFKRDMVITLSQELIMNSFKTIDGRGVNVHIAGGACLTVQYVTNIIIHGINIHDCKRTGNAMVRSSESHYGWRTMADGDGISIFGSSHIWIDHNSLSSCADGLIDAIMGSTAITISNNYLTHHNEAILLGHTDSYTRDKMMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPGNRFAKEVTKRVGAGKGEWNNWNWRSQGDLMLNGAYFTSSGAGASANYARASSLAAKSSSLVGMLTSSSGALKCRIGTLC 438 The following BLAST results are available for this feature:
BLAST of rna-KK1_019937 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: C. cajan Asha genome v1.0 vs. Swissprot) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: Cajanus cajan Asha genome v1.0
Date Performed: 2019-09-17 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-KK1_019937_Cc_Asha_v1.0 ID=rna-KK1_019937_Cc_Asha_v1.0; Name=rna-KK1_019937; organism=Cajanus cajan; type=mRNA; length=1143bpback to top protein sequence of rna-KK1_019937_Cc_Asha_v1.0 >rna-KK1_019937_Cc_Asha_v1.0 ID=rna-KK1_019937_Cc_Asha_v1.0; Name=rna-KK1_019937_Cc_Asha_v1.0; organism=Cajanus cajan; type=polypeptide; length=380bpback to top mRNA from alignment at Chr_1-CM003603.1:1898178..1899877+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>rna-KK1_019937_Cc_Asha_v1.0 ID=rna-KK1_019937_Cc_Asha_v1.0; Name=rna-KK1_019937; organism=Cajanus cajan; type=mRNA; length=1700bp; location=Sequence derived from: Chr_1-CM003603.1:1898178..1899877+ (Cajanus cajanback to top Coding sequence (CDS) from alignment at Chr_1-CM003603.1:1898178..1899877+ >rna-KK1_019937_Cc_Asha_v1.0 ID=rna-KK1_019937_Cc_Asha_v1.0; Name=rna-KK1_019937; organism=Cajanus cajan; type=CDS; length=2286bp; location=Sequence derived from: Chr_1-CM003603.1:1898178..1899877+ (Cajanus cajanback to top |