rna-KK1_019949

Transcript Overview


Name	rna-KK1_019949
Unique Name	rna-KK1_019949_Cc_Asha_v1.0
Type	mRNA
Organism	Cajanus cajan (pigeon pea)
Sequence length	1458
Product	E3 ubiquitin-protein ligase RGLG2

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Chr_1-CM003603.1	supercontig	Chr_1-CM003603.1:2008366..2014512 -	Cajanus cajan Asha genome v1.0	n/a
Chr_1-CM003603.1	supercontig	Chr_1-CM003603.1:2008366..2014512 -	Cajanus cajan Asha genome v1.0	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Cajanus cajan Asha genome v1.0	2019-09-17
BLAST: C. cajan Asha genome v1.0 vs. Swissprot	2019-10-17

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
cccrR0011	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
cccrR0023	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
cccrR0028	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
ccpsR022	Pisum sativum Cameor genome v1a	Pisum sativum
ccpsR036	Pisum sativum Cameor genome v1a	Pisum sativum
ccpvR0004	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
ccpvR0017	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
ccpvR0036	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
ccvuR0003	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
ccvuR0024	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
caiccL0517	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
caiccL0680	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
caccL0156	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
caccL0552	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
caccL0729	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
anccL0001	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anccL0255	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anccL0379	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anccL0433	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anccL0833	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anccL0912	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
asccL0005	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
asccL0662	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
cctifR0008	Vicia faba cv. Tiffany genome v1.0	Vicia faba
cctifR0010	Vicia faba cv. Tiffany genome v1.0	Vicia faba
cctifR0034	Vicia faba cv. Tiffany genome v1.0	Vicia faba
ccvfhR0008	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
ccvfhR0010	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
ccvfhR0036	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
ccvrvR0014	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
ccvrvR0035	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
ccvssR0010	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
ccvuaR0003	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
ccvssR0038	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
ccvuaR0015	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
canccL0154	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
canccL0553	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
canccL0735	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
avjccL0001	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
avjccL0330	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
avjccL0697	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
carccL0160		Cicer arietinum
carccL0594		Cicer arietinum
carccL0785		Cicer arietinum
ccccaR0000	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
ccccaR0050	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
ccvumR0008	Vigna umbellata FF25 genome v1.0	Vigna umbellata
ccvumR0042	Vigna umbellata FF25 genome v1.0	Vigna umbellata

Orthologs


Gene/Transcript	Assembly	Species
Vfaba.Hedin2.R1.2g114720.1	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
rna-XM_014663211.2	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
Ca_16770	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
Cr_14816.1	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
Vfaba.Hedin2.R1.6g144680.1	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
Phvul.001G255900.1	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
LR48_mrnaVigan01g032500	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
Phvul.002G258600.1	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
Vum_01G00793.1	Vigna umbellata FF25 genome v1.0	Vigna umbellata
Psat7g058920.1	Pisum sativum Cameor genome v1a	Pisum sativum
Ca_15949.1	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
Va01G011760.2	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
jg28615.t1	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
rna-TanjilR_11022	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
LR48_mrnaVigan03g310100	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
Va03G084590.2	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
evm.model.Chr01.2278	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
Va10G049260.3	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
Vigun01g241600.2	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
rna-XM_004489490.2	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
Vfaba.Tiffany.R1.2g094000.1	Vicia faba cv. Tiffany genome v1.0	Vicia faba
rna-TanjilR_32978	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
Phvul.004G061800.1	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
Ca_14702	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
rna-TanjilR_01597	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
Vfaba.Tiffany.R1.1g092000.1	Vicia faba cv. Tiffany genome v1.0	Vicia faba
Cr_15132.1	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
jg53645.t1	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
Ca_12735	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
Cr_13073.1	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
Vum_04G03169.1	Vigna umbellata FF25 genome v1.0	Vigna umbellata
rna-XM_014651892.2	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
Vfaba.Hedin2.R1.1g122680.1	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba

Gene/transcripts from the same species that appear to represent the same gene


Gene/Transcript	Assembly	Species
Cc_v2.0_22339.1	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
Cc_v2.0_00156.1	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
gene-KK1_019949	gene-KK1_019949_Cc_Asha_v1.0	Cajanus cajan	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
rna-KK1_019949_Cc_Asha_v1.0	rna-KK1_019949_Cc_Asha_v1.0	Cajanus cajan	polypeptide
rna-KK1_019949	rna-KK1_019949_Cc_Asha_v1.0-protein	Cajanus cajan	polypeptide

The following CDS feature(s) are a part of this mRNA:

The following exon feature(s) are a part of this mRNA:

Homology

[Close]

BLAST of rna-KK1_019949 vs. DB:Swiss
Match: RGLG2_ARATH (E3 ubiquitin-protein ligase RGLG2 OS=Arabidopsis thaliana OX=3702 GN=RGLG2 PE=1 SV=1)

HSP 1 Score: 533.102 bits (1372), Expect = 0.000e+0
Identity = 265/361 (73.41%), Postives = 300/361 (83.10%), Query Frame = 1

Query:  169 KRKLDRKYSRIADNYRSLDEVTAALANAGLESSNLIVGIDFTKSNEWTGKRSFNRKSLHDIGSGQNPYEQAISIIGKTLSAFDEDNMIPCFGFGDASTHDQDVFSFYSEERFCNGFEEVLSRYRQIIPYLKLAGPTSFAPVIEMAMTIVEQTGGQYHVLLIIADGQVTRSIDTQRGYFSPQEQKTVDAIVKASEYPLSIVLVGVGDGPWDMMREFDDNIPSRAFDNFQFVNFTEIMARNVDSMRKETEFALGALMEIPSQYKATIELGILGARRGHSPNRVALPPPLYNRTXXXXXXXXXXXXXFQQRAPTHTGYNSGVHTE-----PSTSSLYDNKVCPICLTNGKDMAFGCGHQVICNC 1236
            K++L+RKYS+I+D+Y SL++VT ALA AGLESSNLIVGIDFTKSNEWTG RSFNRKSLH IGS  NPYEQAI+IIG+TL+AFDEDN+IPC+GFGDASTHDQDVFSF SE+RFCNGFEEVLSRY++I+P LKLAGPTSFAP+I+MAMTIVEQ+GGQYHVL+IIADGQVTRS+DT+ G  SPQEQKTVDAIV+AS+ PLSIVLVGVGDGPWDMMREFDDNIP+RAFDNFQFVNFTEIMA+N     KETEFAL ALMEIP QYKATIEL +LG R G+ P R  LPPP+   +SS  S K S   SF+   P H     G H       P TSS  DN++CPICL+N KDMAFGCGHQ  C C
Sbjct:   89 KKRLERKYSKISDDYSSLEQVTEALARAGLESSNLIVGIDFTKSNEWTGARSFNRKSLHFIGSSPNPYEQAITIIGRTLAAFDEDNLIPCYGFGDASTHDQDVFSFNSEDRFCNGFEEVLSRYKEIVPQLKLAGPTSFAPIIDMAMTIVEQSGGQYHVLVIIADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSIVLVGVGDGPWDMMREFDDNIPARAFDNFQFVNFTEIMAKNKAQSLKETEFALSALMEIPQQYKATIELNLLGRRNGYIPERFPLPPPMRGGSSSYNSPKPSRLPSFKPSVPPHP--TEGYHVRSSPVPPPTSSASDNQLCPICLSNPKDMAFGCGHQTCCEC 447

[Close]

BLAST of rna-KK1_019949 vs. DB:Swiss
Match: RGLG5_ARATH (E3 ubiquitin-protein ligase RGLG5 OS=Arabidopsis thaliana OX=3702 GN=RGLG5 PE=1 SV=1)

HSP 1 Score: 524.242 bits (1349), Expect = 0.000e+0
Identity = 252/360 (70.00%), Postives = 297/360 (82.50%), Query Frame = 1

Query:  163 QPKRKLDRKYSRIADNYRSLDEVTAALANAGLESSNLIVGIDFTKSNEWTGKRSFNRKSLHDIGSGQNPYEQAISIIGKTLSAFDEDNMIPCFGFGDASTHDQDVFSFYSEERFCNGFEEVLSRYRQIIPYLKLAGPTSFAPVIEMAMTIVEQTGGQYHVLLIIADGQVTRSIDTQRGYFSPQEQKTVDAIVKASEYPLSIVLVGVGDGPWDMMREFDDNIPSRAFDNFQFVNFTEIMARNVDSMRKETEFALGALMEIPSQYKATIELGILGARRGHSPNRVALPPPLYNRTXXXXXXXXXXXXXFQQRAPTHTGYNSGVHTEP--STSSLYDNKVCPICLTNGKDMAFGCGHQVICNC 1236
            Q  + L+RKYSRIADNYRS+DEVTAAL++AGLESSNLIVGID TKSNEWTG RSF RKSLH IG+  NPY+QAISIIGKTLS FDEDN+IPC+GFGDA+THDQDVFSF   + +CNGFEEVL  YR+I+P L+L+GPTSFAP+IE AMTIVE++GGQYHVLLIIADGQVTRS+DT  G FSPQEQ+T+DAIV+ASEYPLSIVLVGVGDGPWD MR+FDDNIP+RAFDNFQFVNFT+IM++N+D  RKE EFAL ALMEIPSQYKAT+ELG+LG R GH P+R+ALPPP Y   S   S ++S S SFQ +      Y++GV + P  +T +    + CP+CL + K+MAF CGHQ    C
Sbjct:   58 QTPKNLERKYSRIADNYRSIDEVTAALSHAGLESSNLIVGIDVTKSNEWTGARSFGRKSLHFIGTTPNPYQQAISIIGKTLSVFDEDNLIPCYGFGDATTHDQDVFSFNPNDTYCNGFEEVLMCYREIVPQLRLSGPTSFAPIIERAMTIVEESGGQYHVLLIIADGQVTRSVDTDNGGFSPQEQQTIDAIVRASEYPLSIVLVGVGDGPWDTMRQFDDNIPARAFDNFQFVNFTDIMSKNIDPARKEAEFALSALMEIPSQYKATLELGLLGQRTGHCPDRIALPPPTYATQSMRNSPRTSRSTSFQNKP-----YDNGVSSTPPSTTHNESQQQFCPVCLVSAKNMAFNCGHQTCAGC 412

[Close]

BLAST of rna-KK1_019949 vs. DB:Swiss
Match: RGLG1_ARATH (E3 ubiquitin-protein ligase RGLG1 OS=Arabidopsis thaliana OX=3702 GN=RGLG1 PE=1 SV=1)

HSP 1 Score: 516.153 bits (1328), Expect = 7.036e-180
Identity = 250/356 (70.22%), Postives = 289/356 (81.18%), Query Frame = 1

Query:  169 KRKLDRKYSRIADNYRSLDEVTAALANAGLESSNLIVGIDFTKSNEWTGKRSFNRKSLHDIGSGQNPYEQAISIIGKTLSAFDEDNMIPCFGFGDASTHDQDVFSFYSEERFCNGFEEVLSRYRQIIPYLKLAGPTSFAPVIEMAMTIVEQTGGQYHVLLIIADGQVTRSIDTQRGYFSPQEQKTVDAIVKASEYPLSIVLVGVGDGPWDMMREFDDNIPSRAFDNFQFVNFTEIMARNVDSMRKETEFALGALMEIPSQYKATIELGILGARRGHSPNRVALPPPLYNRTXXXXXXXXXXXXXFQQRAPTHTGYNSGVHTEPSTSSLYDNKVCPICLTNGKDMAFGCGHQVICNC 1236
            ++K DR+YS+I+DNY SL +V+ AL  AGLESSNLIVGIDFTKSNEWTG +SFNRKSLH + +  NPYEQAI+IIG+TL+AFDEDN+IPC+GFGDASTHDQDVFSFY E RFCNGFEEVL+RYR+I+P LKLAGPTSFAP+IEMAMT+VEQ+ GQYHVL+IIADGQVTRS+DT+ G  SPQEQKTVDAIVKAS  PLSIVLVGVGDGPWDMM+EFDDNIP+RAFDNFQFVNFTEIM++N D  RKETEFAL ALMEIP QYKATIEL +LG R G+ P R+ LPPP+     S  S  SS   +F+   P +             SS  D ++CPICL+N K+MAFGCGHQ  C C
Sbjct:  123 RKKFDRRYSKISDNYSSLLQVSEALGRAGLESSNLIVGIDFTKSNEWTGAKSFNRKSLHHLSNTPNPYEQAITIIGRTLAAFDEDNLIPCYGFGDASTHDQDVFSFYPEGRFCNGFEEVLARYREIVPQLKLAGPTSFAPIIEMAMTVVEQSSGQYHVLVIIADGQVTRSVDTEHGRLSPQEQKTVDAIVKASTLPLSIVLVGVGDGPWDMMQEFDDNIPARAFDNFQFVNFTEIMSKNKDQSRKETEFALSALMEIPPQYKATIELNLLGVRNGNIPQRIPLPPPV----QSGSSFSSSRIPNFEPSVPPYP------FESKQMSSADDIQLCPICLSNPKNMAFGCGHQTCCEC 468

[Close]

BLAST of rna-KK1_019949 vs. DB:Swiss
Match: RGLG3_ARATH (E3 ubiquitin-protein ligase RGLG3 OS=Arabidopsis thaliana OX=3702 GN=RGLG3 PE=1 SV=1)

HSP 1 Score: 414.846 bits (1065), Expect = 7.712e-142
Identity = 210/357 (58.82%), Postives = 254/357 (71.15%), Query Frame = 1

Query:  175 KLDRKYSRIADNYRSLDEVTAALANAGLESSNLIVGIDFTKSNEWTGKRSFNRKSLHDIGSGQNPYEQAISIIGKTLSAFDEDNMIPCFGFGDASTHDQDVFSFYSEERFCNGFEEVLSRYRQIIPYLKLAGPTSFAPVIEMAMTIVEQTGGQYHVLLIIADGQVTRSIDTQRGYFSPQEQKTVDAIVKASEYPLSIVLVGVGDGPWDMMREFDDNIPSRAFDNFQFVNFTEIMARNVDSMRKETEFALGALMEIPSQYKATIELGILGARRGHSPNRVALPPP-LYNRTXXXXXXXXXXXXXFQQRAPTHTGYNSGVHTEPSTSSLYDNKVCPICLTNGKDMAFGCGHQVICNCKV 1242
            K +++ S IAD++ SLD+V  +L  AGLESSNLI+GIDFTKSNEWTG+ SFNRKSLH IG  QNPYE+AISIIG+TLS FDED++IPCFGFGD +T DQ VFSFY E + C+G E  + RYR+I+P+LKL+GPTSFAPVI+ A+ IVEQ   QYHVL+IIADGQVTR+ D   G  SPQE+ T+++I+ AS YPLSIVLVGVGDGPWD M++FDDNIP R FDNFQFVNFT+IM+ + D+ +KE  FAL ALMEIP QYKAT+ L     R  H  ++   PPP +  R ++  S  +           T T   S     PST       VCPICLTN KDMAF CGH     C V
Sbjct:    6 KRNQQPSYIADHFSSLDQVITSLREAGLESSNLILGIDFTKSNEWTGRYSFNRKSLHAIGKRQNPYEKAISIIGRTLSPFDEDDLIPCFGFGDVTTRDQYVFSFYPENKSCDGLENAVKRYREIVPHLKLSGPTSFAPVIDAAINIVEQNNMQYHVLVIIADGQVTRNPDVPLGRLSPQEEATMNSIMAASHYPLSIVLVGVGDGPWDTMKQFDDNIPHREFDNFQFVNFTKIMSEHKDAAKKEAAFALAALMEIPFQYKATLSLNRKPVRSSHQHHKPLPPPPEVIERDNAVRSVPNQM---------TETAEKSD-RLAPSTVP-----VCPICLTNPKDMAFSCGHTTCKECGV 347

[Close]

BLAST of rna-KK1_019949 vs. DB:Swiss
Match: RGLG4_ARATH (E3 ubiquitin-protein ligase RGLG4 OS=Arabidopsis thaliana OX=3702 GN=RGLG4 PE=1 SV=1)

HSP 1 Score: 391.349 bits (1004), Expect = 4.721e-132
Identity = 192/351 (54.70%), Postives = 241/351 (68.66%), Query Frame = 1

Query:  184 RKYSRIADNYRSLDEVTAALANAGLESSNLIVGIDFTKSNEWTGKRSFNRKSLHDIGSGQNPYEQAISIIGKTLSAFDEDNMIPCFGFGDASTHDQDVFSFYSEERFCNGFEEVLSRYRQIIPYLKLAGPTSFAPVIEMAMTIVEQTGGQYHVLLIIADGQVTRSIDTQRGYFSPQEQKTVDAIVKASEYPLSIVLVGVGDGPWDMMREFDDNIPSRAFDNFQFVNFTEIMARNVDSMRKETEFALGALMEIPSQYKATIELGILGARRGHSPNRVALPPPLYNRTXXXXXXXXXXXXXFQQRAPTHTGYNSGVHTEPSTSSLYDNKVCPICLTNGKDMAFGCGHQVICNC 1236
            +KY+ I D + SLD+V+ AL  AGLESSNLI+G+DFTKSNEWTGK SF+ K LH +G   NPYE+AI +IG+TL+ FDEDN+IPCFGFGD++THD++VF F+S+   C+GFEEVL+ Y++I P L+L+GPTS+ P+I+ A+ IVE+  GQ+HVL+I+ADGQVTR  D   G  S QE+ T+DAIV AS Y LSIVLVGVGDGPW+ MR+FDD IP R FDNFQFVNFTEIM RN     KET FAL ALMEIP QY+A IEL +LG + G +   V                            P     N+ + +  S +S    + CPICLTN KD+AF CGH    +C
Sbjct:   51 KKYALIPDRFSSLDQVSKALREAGLESSNLILGVDFTKSNEWTGKTSFDGKCLHALGETSNPYEKAIFVIGQTLAPFDEDNLIPCFGFGDSTTHDEEVFGFHSDNSPCHGFEEVLACYKRIAPNLRLSGPTSYGPLIDAAVDIVEKNNGQFHVLVIVADGQVTRGTDMAEGELSQQEKTTIDAIVNASSYALSIVLVGVGDGPWEDMRKFDDKIPKREFDNFQFVNFTEIMTRNSPESAKETAFALAALMEIPFQYQAAIELRLLGKQTGLAKTIVPR----------------------PPPIPYTPPTNAELPSTASPASPEQTQSCPICLTNRKDVAFSCGHMTCGDC 379

[Close]

BLAST of rna-KK1_019949 vs. DB:Swiss
Match: CPNA2_CAEEL (Copine family protein 2 OS=Caenorhabditis elegans OX=6239 GN=cpna-2 PE=2 SV=4)

HSP 1 Score: 266.159 bits (679), Expect = 7.931e-77
Identity = 134/269 (49.81%), Postives = 182/269 (67.66%), Query Frame = 1

Query:  208 NYRSLDEVTAALANAGLESSNLIVGIDFTKSNEWTGKRSFNRKSLHDIGSGQ-NPYEQAISIIGKTLSAFDEDNMIPCFGFGDASTHDQDVFSF---YSEERFCNGFEEVLSRYRQIIPYLKLAGPTSFAPVIEMAMTIVEQTGGQYHVLLIIADGQVTRSIDTQRGYFSPQEQKTVDAIVKASEYPLSIVLVGVGDGPWDMMREFDDNIPSRAFDNFQFVNFTEIM--ARNVDSMRKETEFALGALMEIPSQYKATIELGILG-ARRG 993
            ++++LD++  A+ +AGLE SNLI GID+TKSN + G+R+F+++ LH I   + NPY+Q I I+GKTLS+FD D  IP +GFGD    D  +F+    Y  E+ CNGFEEVL  Y ++ P ++++GPT+F P+I+ A+ I ++    YH+L+I+ADGQVT     Q+            AI  AS YPLSI++VGVGDGPW+MM  FDDNIP R FDNF FV+F ++M  A N D+      FAL ALMEIP QYKA  ELG+L  +RRG
Sbjct: 7455 HFKTLDDIVKAIKHAGLEYSNLIFGIDYTKSNFYQGERTFDKRPLHTIDPAEMNPYQQVIQIVGKTLSSFDADGQIPAYGFGDEEFTDHGIFNIAERYDLEKDCNGFEEVLRVYNEVTPTIEMSGPTNFVPLIDRAIEICKEKHS-YHILVIVADGQVTNEKINQK------------AIAAASHYPLSIIMVGVGDGPWNMMGRFDDNIPKRLFDNFHFVDFHKVMFNAPNADA-----SFALNALMEIPDQYKAIKELGLLKHSRRG 7705

[Close]

BLAST of rna-KK1_019949 vs. DB:Swiss
Match: CPNA1_CAEEL (Copine family protein 1 OS=Caenorhabditis elegans OX=6239 GN=cpna-1 PE=1 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 4.960e-66
Identity = 119/255 (46.67%), Postives = 166/255 (65.10%), Query Frame = 1

Query:  217 SLDEVTAALANAGLESSNLIVGIDFTKSNEWTGKRSFNRKSLHDIGSG-QNPYEQAISIIGKTLSAFDEDNMIPCFGFGDASTHDQDVFSFYSEERFCNGFEEVLSRYRQIIPYLKLAGPTSFAPVIEMAMTIVEQTGGQYHVLLIIADGQVTRSIDTQRGYFSPQEQKTVDAIVKASEYPLSIVLVGVGDGPWDMMREFDDNIPSRAFDNFQFVNFTEIMARNVDSMRKETEFALGALMEIPSQYKATIELGIL 978
            SLD ++ A+  AGLE++NLI GID+T SN++ G+ SF  +SLH I     NPY+Q ISI+G+TL+ F     +  +GFGDA T D  VF+   E   C   +EVL+ Y  + P + L+GPT+FAP+I  AM I  Q    YH+L+IIADGQVT    T+R            AIV+A ++PLSI++VGVGDGPWDMMR FD+++P R +DNF FV F EI+ ++ +    + + A+ +L+EIP QY+   ELG+L
Sbjct:  846 SLDSLSEAMRKAGLETTNLIFGIDYTASNKYQGEESFGGRSLHTIHPHVTNPYQQVISILGRTLAPFAGQGRLGVYGFGDAKTGDWSVFNLKGEGGDCRSLDEVLNVYNTVTPTVALSGPTNFAPLIYQAMEIC-QKSRDYHILVIIADGQVTNERATRR------------AIVQACQHPLSIIVVGVGDGPWDMMRIFDESLPKRPWDNFHFVEFHEIVKKSTNMEDGDVKLAVQSLLEIPDQYRCICELGLL 1087

[Close]

BLAST of rna-KK1_019949 vs. DB:Swiss
Match: CPNE1_HUMAN (Copine-1 OS=Homo sapiens OX=9606 GN=CPNE1 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.701e-24
Identity = 85/273 (31.14%), Postives = 125/273 (45.79%), Query Frame = 1

Query:  187 KYSRIADNYRSLDEVTAALANAGLESSNLIVGIDFTKSNEWTGKRSFNRKSLHDIG-SGQNPYEQAISIIGKTLSAFDEDNMIPCFGFGDASTHDQDV-----FSFYSEERFCNGFEEVLSRYRQIIPYLKLAGPTSFAPVIEMAMTIVEQ-----TGGQYHVLLIIADGQVTRSIDTQRGYFSPQEQKTVDAIVKASEYPLSIVLVGVGDGPWDMMREFD-DNIP-------SRAFDNFQFVNFTEIMARNVDSMRKETEFALGALMEIPSQ 948
            K  R+   Y  LD V            N  VG+DFT SN   G  S +  SLH +  +G N Y  A+  +G  +  +D D + P FGFG     D  V      +F     +C G + ++  YRQ +P ++L GPT+FAP+I        Q     T  QY +LL++ DG VT              + T +A+V+AS  P+S+++VGVG   ++ M + D D  P       + A D  QFV +     R   +  +E   A   L E+P+Q
Sbjct:  264 KICRVETEYSFLDYVMGGC------QINFTVGVDFTGSN---GDPS-SPDSLHYLSPTGVNEYLMALWSVGSVVQDYDSDKLFPAFGFGAQVPPDWQVSHEFALNFNPSNPYCAGIQGIVDAYRQALPQVRLYGPTNFAPIINHVARFAAQAAHQGTASQYFMLLLLTDGAVT------------DVEATREAVVRASNLPMSVIIVGVGGADFEAMEQLDADGGPLHTRSGQAAARDIVQFVPY-----RRFQNAPREA-LAQTVLAEVPTQ 508

[Close]

BLAST of rna-KK1_019949 vs. DB:Swiss
Match: CPNE1_RAT (Copine-1 OS=Rattus norvegicus OX=10116 GN=Cpne1 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 8.147e-24
Identity = 88/273 (32.23%), Postives = 130/273 (47.62%), Query Frame = 1

Query:  187 KYSRIADNYRSLDEVTAALANAGLESSNLIVGIDFTKSNEWTGKRSFNRKSLHDIG-SGQNPYEQAISIIGKTLSAFDEDNMIPCFGFGDASTHDQDV-----FSFYSEERFCNGFEEVLSRYRQIIPYLKLAGPTSFAPVIE-----MAMTIVEQTGGQYHVLLIIADGQVTRSIDTQRGYFSPQEQKTVDAIVKASEYPLSIVLVGVGDGPWDMMREFD-DNIPSR-------AFDNFQFVNFTEIMARNVDSMRKETEFALGALMEIPSQ 948
            K  R+   Y  LD V            N  VG+DFT SN   G  S +  SLH +  +G N Y  A+  +G  +  +D D + P FGFG     D  V      +F     +C G + ++  YRQ +P ++L GPT+FAP+I       A    ++T  QY VLL++ DG VT              + T  A+V+AS+ P+S+++VGVG   +++M + D D  P R       A D  QFV +     R   +  +ET  A+  L E+P+Q
Sbjct:  263 KTCRVETEYSFLDYVMGGC------QINFTVGVDFTGSN---GDPS-SPDSLHYLSPTGVNEYLTALWSVGSVVQDYDSDKLFPAFGFGAQVPPDWQVSHEFALNFNPSNPYCAGIQGIVDAYRQALPQVRLYGPTNFAPIINHVARFAAQAAQQRTASQYFVLLLLTDGAVT------------DVEATCKAVVEASKLPMSVIIVGVGGADFEVMEQLDADGGPLRTRSGEAAARDIVQFVPY-----RRFQNAPRET-LAMTVLAEVPTQ 507

[Close]

BLAST of rna-KK1_019949 vs. DB:Swiss
Match: CPNE8_MOUSE (Copine-8 OS=Mus musculus OX=10090 GN=Cpne8 PE=2 SV=3)

HSP 1 Score: 107.071 bits (266), Expect = 2.267e-23
Identity = 77/243 (31.69%), Postives = 116/243 (47.74%), Query Frame = 1

Query:  268 NLIVGIDFTKSNEWTGKRSFNRKSLHDIGSGQ-NPYEQAISIIGKTLSAFDEDNMIPCFGFG-----DASTHDQDVFSFYSEERFCNGFEEVLSRYRQIIPYLKLAGPTSFAPVIEMAMTIVE--QTGGQYHVLLIIADGQVTRSIDTQRGYFSPQEQKTVDAIVKASEYPLSIVLVGVGDGPWDMMREFDDN---IPSRA----FDNFQFVNFTEIMARNVDSMRKETEFALGALMEIPSQY 951
            N  V IDFT SN    + +    SLH +   Q N Y  A+  +G+ +  +D D M P  GFG     D     +   +   +  +C+G E V+  Y + +  ++L GPT+FAPVI          + G QY VLLI+ DG ++    T+            ++IV AS+ P+SI++VGVG   +D M E D +   + SR      D  QFV F + + R+ + +      A   L EIP Q+
Sbjct:  322 NFTVAIDFTASNGNPAQPT----SLHYMNPYQLNAYGMALKAVGEIVQDYDSDKMFPALGFGAKLPPDGRISHEFALNGNPQNPYCDGIEGVMEAYYRSLKSVQLYGPTNFAPVINHVARYASSVKDGSQYFVLLIVTDGVISDMAQTK------------ESIVNASKLPMSIIIVGVGPAEFDAMVELDGDDVRVSSRGKYAERDIVQFVPFRDYIDRSGNHILSMARLAKDVLAEIPEQF 548

The following BLAST results are available for this feature:

BLAST of rna-KK1_019949 vs. DB:Swiss

BLAST of rna-KK1_019949 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: C. cajan Asha genome v1.0 vs. Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RGLG2_ARATH	0.000e+0	73.41	E3 ubiquitin-protein ligase RGLG2 OS=Arabidopsis t...	[more]
RGLG5_ARATH	0.000e+0	70.00	E3 ubiquitin-protein ligase RGLG5 OS=Arabidopsis t...	[more]
RGLG1_ARATH	7.036e-180	70.22	E3 ubiquitin-protein ligase RGLG1 OS=Arabidopsis t...	[more]
RGLG3_ARATH	7.712e-142	58.82	E3 ubiquitin-protein ligase RGLG3 OS=Arabidopsis t...	[more]
RGLG4_ARATH	4.721e-132	54.70	E3 ubiquitin-protein ligase RGLG4 OS=Arabidopsis t...	[more]
CPNA2_CAEEL	7.931e-77	49.81	Copine family protein 2 OS=Caenorhabditis elegans ...	[more]
CPNA1_CAEEL	4.960e-66	46.67	Copine family protein 1 OS=Caenorhabditis elegans ...	[more]
CPNE1_HUMAN	3.701e-24	31.14	Copine-1 OS=Homo sapiens OX=9606 GN=CPNE1 PE=1 SV=...	[more]
CPNE1_RAT	8.147e-24	32.23	Copine-1 OS=Rattus norvegicus OX=10116 GN=Cpne1 PE...	[more]
CPNE8_MOUSE	2.267e-23	31.69	Copine-8 OS=Mus musculus OX=10090 GN=Cpne8 PE=2 SV...	[more]

InterPro

Analysis Name: Cajanus cajan Asha genome v1.0
Date Performed: 2019-09-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002035	von Willebrand factor, type A	SMART	SM00327	VWA_4	coord: 88..291 e-value: 7.4E-7 score: 38.8
IPR010734	Copine	PFAM	PF07002	Copine	coord: 113..326 e-value: 2.4E-74 score: 249.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 334..381
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 342..381
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
IPR036465	von Willebrand factor A-like domain superfamily	SUPERFAMILY	53300	vWA-like	coord: 89..272

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at Chr_1-CM003603.1:2008366..2014512-
coding sequence from alignment at Chr_1-CM003603.1:2008366..2014512-

mRNA sequence

>rna-KK1_019949_Cc_Asha_v1.0 ID=rna-KK1_019949_Cc_Asha_v1.0; Name=rna-KK1_019949; organism=Cajanus cajan; type=mRNA; length=1458bp
ATGGGAGGGAAGAGTTCAAAAGGGAGTGGTAGGAGGTATGAGTATGATTA
TGGTGCTTCTTCATCTTCATGGAATAACCATGGTGGATACCCTTCATCGT
ACCAAACACCTCAGCACCAGCATGCACCAGCACCACCATCAGCTCCATTT
CATGACTATGCACAGCCAAAAAGGAAGTTGGATAGGAAATATTCCAGGAT
AGCTGATAATTACCGTTCTCTGGATGAGGTTACTGCTGCACTTGCTAATG
CTGGGCTGGAATCTTCTAATCTCATTGTTGGCATTGATTTCACAAAGAGC
AATGAGTGGACAGGGAAGAGGTCATTCAATCGAAAAAGTTTACATGACAT
TGGAAGTGGGCAAAACCCTTATGAACAAGCAATTTCTATTATTGGGAAAA
CGTTATCTGCTTTCGATGAAGATAACATGATTCCTTGTTTTGGATTTGGA
GATGCATCTACACATGATCAAGATGTATTTAGTTTCTATTCAGAAGAGAG
GTTCTGCAATGGGTTTGAGGAAGTTTTGTCGCGATACAGACAAATTATTC
CTTACCTCAAACTAGCAGGACCCACTTCGTTTGCTCCTGTTATTGAAATG
GCTATGACTATTGTTGAACAAACTGGTGGCCAATATCATGTCTTGCTAAT
AATTGCAGATGGACAGGTGACTAGAAGCATTGACACACAGCGTGGCTACT
TTAGTCCACAGGAGCAGAAGACAGTAGATGCAATTGTAAAAGCCAGTGAG
TATCCACTGTCAATAGTTTTGGTGGGAGTTGGAGATGGACCATGGGATAT
GATGAGGGAATTTGATGATAACATCCCTTCTCGGGCATTTGACAATTTTC
AGTTTGTGAATTTTACTGAAATAATGGCAAGGAATGTCGATTCAATGAGA
AAAGAGACTGAATTTGCCCTTGGAGCTTTGATGGAGATACCTTCTCAATA
TAAGGCAACCATTGAGCTTGGAATATTGGGTGCACGGAGGGGACATTCAC
CAAATAGGGTTGCTCTACCCCCACCTCTTTATAATAGGACTTCTTCCAGC
ATTAGCACAAAATCTTCAGGGTCAAACAGTTTTCAGCAGAGGGCACCTAC
ACATACTGGCTATAACAGTGGCGTTCACACAGAGCCATCTACAAGTTCTT
TATATGATAATAAGGTATGCCCCATTTGTCTTACCAATGGAAAGGATATG
GCCTTTGGTTGTGGGCATCAGGTTATTTGTAATTGCAAAGTACCTACCAA
GCTCATAGGCAAGTTTTATCATACTACTATATGTATGCTAATACAATATA
TTAGTGAATGTTGGCTTGTGAGGAAAGTATATTGCATGAAATTTAGTCAT
GTGAAAAAGGAGAAAGAGAGACCAAGAAGGACAATGAGGGAAGTTGTTAA
GAGGGATCTCATGGCCAATAATATCTCTCGAAGTTTGGTCTTTAATCGAG
TCAAATAA

protein sequence of rna-KK1_019949_Cc_Asha_v1.0

>rna-KK1_019949_Cc_Asha_v1.0 ID=rna-KK1_019949_Cc_Asha_v1.0; Name=rna-KK1_019949_Cc_Asha_v1.0; organism=Cajanus cajan; type=polypeptide; length=485bp
MGGKSSKGSGRRYEYDYGASSSSWNNHGGYPSSYQTPQHQHAPAPPSAPF
HDYAQPKRKLDRKYSRIADNYRSLDEVTAALANAGLESSNLIVGIDFTKS
NEWTGKRSFNRKSLHDIGSGQNPYEQAISIIGKTLSAFDEDNMIPCFGFG
DASTHDQDVFSFYSEERFCNGFEEVLSRYRQIIPYLKLAGPTSFAPVIEM
AMTIVEQTGGQYHVLLIIADGQVTRSIDTQRGYFSPQEQKTVDAIVKASE
YPLSIVLVGVGDGPWDMMREFDDNIPSRAFDNFQFVNFTEIMARNVDSMR
KETEFALGALMEIPSQYKATIELGILGARRGHSPNRVALPPPLYNRTSSS
ISTKSSGSNSFQQRAPTHTGYNSGVHTEPSTSSLYDNKVCPICLTNGKDM
AFGCGHQVICNCKVPTKLIGKFYHTTICMLIQYISECWLVRKVYCMKFSH
VKKEKERPRRTMREVVKRDLMANNISRSLVFNRVK

mRNA from alignment at Chr_1-CM003603.1:2008366..2014512-

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>rna-KK1_019949_Cc_Asha_v1.0 ID=rna-KK1_019949_Cc_Asha_v1.0; Name=rna-KK1_019949; organism=Cajanus cajan; type=mRNA; length=6147bp; location=Sequence derived from: Chr_1-CM003603.1:2008366..2014512- (Cajanus cajan
ATGGGAGGGAAGAGTTCAAAAGGGAGTGGTAGGAGGTATGAGTATGATTA
TGGTGCTTCTTCATCTTCATGGAATAACCATGGTGGATACCCTTCATCGT
ACCAAACACCTCAGCACCAGCATGCACCAGCACCACCATCAGCTCCATTT
CATGACTATGCACAGCCAAAAAGGAAGTTGGATAGGAAATATTCCAGGAT
AGCTGATAATTACCGTTCTCTGGATGAGGTAATTGGATCATTGCATGTAA
CTGTTTTTTGGTTTTCTTGCATATTGTTAGCAATTATTCTTTGGTTTTGC
TCGTTGTCGTTATCATTGACTCTTGTCTAATTGGGGGTAACAATTTAATT
GCATACCACATTGACTTAAATAAGTATACTCCCTGCCCTGCTATGCTAGT
GTGAATGCAGTTTGGATAAAGTTCAAAGGAAAATAGAAAGTGAGATAAAA
GAAAGGGAATCGATTTAATCCATCTAATTGGCTAAAAGGATATGTTTTGA
ATTGTTCTGCCCAAAATCAGTCTACTTTTCTGCCTCCTTTTACCATGAGA
GTTGAAATATTTAAGCTCTTAATTGGTTTTAATAAATAATAATTATAACA
ATTTAGTGTAATGGTAAGCACGAGATATGGACTTAGGGTTCAAGCCACAG
AAATTACGTAAACAAGTTTTTTCTTTTTATTTATGAACATTATCTGCACA
ATATTTTAAAACTGACAACCAGGAGTTGATTTACACTCACAGAGTGTAAC
TTTTGCTAGGCAAACATTATTTTAACATTGACAGTAGTTACACAAACAAG
TTTAATCGAAAGAAGTGGCTTAAGAGAGGATGCTGCACAGAATACTGTTT
CATCTCTTTCTTGCTTCCTTATTATGTATCTATGCTTTTGCTGTCAAGGA
AAACTGTCAGTGTACATTAAAAAGGGAGGAAAAAAGAGGGAAAAAAAACA
CTATGTCAGTATGTTACTGTGAGCAAACTAATCCAAATGTACAGTGAGGT
TGTCTTGAGATTTAGGGATGAAGCCAACTGCTTAAATTCTTTATACTTTT
TTCTTTTCTCAAGTTTCAATATATCAGTTTTTAATATTCACTACTGATTG
TACAAGTAACCCATAAAGAATTATAGATGTCTCATACTAGCTACTGTTAA
AATTGATGTAAGCTTTACAACTCCAGAGAGACAATACTCAATACTTGTCC
AATAATGAAATAATGAAGTAATGAATACAGGTTACTGCTGCACTTGCTAA
TGCTGGGCTGGAATCTTCTAATCTCATTGTTGGCATTGATTTCACAAAGA
GCAATGAGTGGACAGGTGTTATCTCTTACAATTTGATGCTTGAATCATTT
GTAATAGGTTATAATGCTAAATATATATGTTAATTTGGAAATCAGGGAAG
AGGTCATTCAATCGAAAAAGTTTACATGACATTGGAAGTGGGCAAAACCC
TTATGAACAAGCAATTTCTATTATTGGGAAAACGTTATCTGCTTTCGATG
AAGATAACATGATTCCTTGTTTTGGATTTGGAGATGGTAATGCCAAATAT
GAAACTAACTGTTTTTCCAATGAAGTTGTTCTAGTTTTTTTCCAGATTGC
AATCATGATTTGTGTTTCTCTTTTGTCCATTTTCTTTCAGCATCTACACA
TGATCAAGATGTATTTAGTTTCTATTCAGAAGAGAGGTTCTGCAATGGGT
TTGAGGAAGTTTTGTCGCGATACAGACAAATTATTCCTTACCTCAAACTA
GCAGGTGTTGCCTTTAACTATTATCTTATAATTTTTTTAATTAGGCTCAT
TATAACTCATTACATTCATGTGACAGGACCCACTTCGTTTGCTCCTGTTA
TTGAAATGGCTATGACTATTGTTGAACAAACTGGTGGCCAATATCATGTC
TTGCTAATAATTGCAGATGGACAGGTAAGTCTTTAATTCATATTTCACAC
TGTAGAGATGAATACTTTTAAGTACTTTGTATCAGTCATCTTAAGTATCA
TATCATAAATGAGGAAATGCAATGCTCTAGTTGTAACATTCAAGCATAGT
TTCATTTGGTTTTTCTTGTAAATGCTAATATGTACTGTATCCCACTATCT
CATAAGTTTCACTATCTCACACATTACATCTGATCAATTGTAAAAGTAAA
CTACATGTGAAAAACACTTTCAATTAAATGATTCATATTTGTTGTAGATA
TTCATTGTTCTGCTCTGTGCCAGGGCTTCAAAAACTCATATTCGGCATGT
TGTCACAGGTGACTAGAAGCATTGACACACAGCGTGGCTACTTTAGTCCA
CAGGAGCAGAAGACAGTAGATGCAATTGTAAAAGCCAGGTAACTTTTTAG
TTATATGATTTTCTCTCATGTGGAGTACCATTCTGCATTCTTAAATTCTT
TTAAAATTGCAGTGAGTATCCACTGTCAATAGTTTTGGTGGGAGTTGGAG
ATGGACCATGGGATATGATGAGGGAATTTGATGATAACATCCCTTCTCGG
GCATTTGACAATTTTCAGGTTTGGTGTATTTCACTTGGCCCTTTTTACTT
GGCATGTTTAAATCACTAAAATGTGATATTTTTATTTGGATGGATGTAGT
TTGTGAATTTTACTGAAATAATGGCAAGGAATGTCGATTCAATGAGAAAA
GAGACTGAATTTGCCCTTGGAGCTTTGATGGAGATACCTTCTCAATATAA
GGCAACCATTGAGCTTGGAATATTGGGGTATTAACTCAATAGTCAATATC
ATTTCATTACATTAAAATATGGTATTTATAGCCTGTTATAAGAGGGTTTT
TCTGGTGCAATAACCATAAACTGAATTTGAAAATCTCGTCTTCATTGATA
TGAGCAGTGCACGGAGGGGACATTCACCAAATAGGGTTGCTCTACCCCCA
CCTCTTTATAATAGGACTTCTTCCAGCATTAGCACAAAATCTTCAGGGTC
AAACAGTTTTCAGCAGAGGGCACCTACACATACTGGCTATAACAGTGGCG
TTCACACAGAGCCATCTACAAGTTCTTTATATGATAATAAGGTATTAAGT
CCATGCTTTAATGTAAGAAACGTCTTTCTTATTAAATTAACACTGTTTAG
CTTTCCTCCCTTAATGTCATCATAATGATTCATGATCATTTTTGTATCAC
ATATGACTTGGTCGGCTGCAGGTATGCCCCATTTGTCTTACCAATGGAAA
GGATATGGCCTTTGGTTGTGGGCATCAGGTAACCAATTAAGTTACATGCT
ACTAATTACTAGTCTTGATTCTAGTATTTAAGGTTGCAAAGGGTCAAACA
TATATTAAGGTTTTCCCTCTCATGCATTTCCTCTCGTGGCAGACTTGTTG
TGAGTGTGGAGAAGACCTCCAATTCTGTCCTATTTGCCGGAGCACAATCC
ATACTAAAATAAAGCTTTACTAGTTAGCTTGGCTGCAGAAGTGCTTTCAA
TGGAAATTTCGTTCCTTTCCAGAATAAGGTTAGTCATAAAAGTTTGATAA
TATTTGAACGTTAGAAACTCAATGTTCTATTGATGCATTAAGTCATGAAT
TAACTTGATTCATACGCAGGGCTGCAAAAAGGTCTGGCACGTTCCACGGA
TTTTTTTTGTCCATAAAAACAGCTTTGGCAATTTTGAGGCGAAGCTTGTA
TGCCCAGTAAGGAAGGGTTGTTTGCAGAAAGAATTGGCCTTACACCTTTG
TATATATGTACTTCGTGTGTCGTGAAGGCATCATCATGTTAAAAAATAAA
CTCTGTAAAAATTGCTTACATTGTTCTGAAGAGCATTTATTGTTTTGGTC
TTATAGATTGTCTTTCTACAAAGCATGAATCTGTATACTCCTTGGGAAAA
AGGGATTTTTTTTTTTATTCACTTATCAGAGTAAAATACATGGAAAGTTG
CCTCAACTAGTGAGTTTAACAAATGCCTGACCTTAAAATGAAAAGTAAAC
AATCGCTAATCTCCCTGAACTTTTTTCTTTTTATTTTTTACCCAAAAAAT
AAGCAATAAAATTCTTCAACTTTCAATAATTAACATATACATTTGATAAC
AAATTAGACTGCAGGCTCCTTCCTTCTGGCTCTTGAAGGAACTTCTTATC
TTCTATGTAAGTCTGTATCTCCGTAATCGTCCTCGTTAATTCTGGTATAT
TCCGTGATTTCAGATCAACTAAAAAGTTCTTCGAGACAACGTTCAGCATC
TTCAAGAATTGAAATTTATATCTTTTATAGAGAGCAAATCCAGCCATCTG
AGAAAAAGTAAATTTGTTAACCTTAACAAATCTATATAGAAAGCATCTCA
ACGGTCTGCATTACTTACTTGCAAGAATGCATTGAGCGAAACAGCTGTGT
ATTGATTTGCTGGGAGTGTGTTCAAGAACCTTGCAAGCCATGCCCAACCT
TCTTTCAAGCCGTGCAAATTTTGAACGTTTGTAGTTTCAGTCTGTTGAAA
CAAGCATGGTCAACTCTCAACTGTCAATCAGTTAAGTAATGTACACATTG
TAAATCTCTAAAAATTTGATGTTCATAACAGACCTGAACCAGTGCACCAT
ACACCTTCATGTATGACTCTAACCGCTTTAAATAATCTTCTGTACTCTCT
ATCTTTCCTTCATCTTCTCGATAACCAATACTTTTGAAGTATGCCTCTTT
TGATTGGAAAGCGGACTGACCAGGGAAAAATTATCAATGCAGATTCAACG
CCAATATTTAAAATTATATTTGAAGAACACGTGTTTGATCATTTATAAGA
ATAAATGATTAATGTTATAAAATTTGAGTTTGAAATATTTGAGACAGTGA
AGAATAAGGACAGGTAAGAATTAAAAGATATAATTTTTATATCTATCTCA
AACATTGCAAAATTATACTTTCTGGCTGCAGTAACTAATCATTATCTGTG
AAAATGTAATTGTTACGTCAGAAAAATTGGATAGCTAATGTTTTACATCG
TAGCAGTTAAAGTATAACCATTTTGCTTCTTTCATATAGAAAAATCGGGC
TCAGGCCTATTATTTAGGCAAATTGTGATATCTAAATGACCAACAAACGA
ATTTTACGTAGAAAATAATTTTCCCCCCCTTCAAATTGACTTTAAAGACA
GTTCAAATTTACAAAATTCACTGTTTCCTCAGCAACCCAGCCATACCATA
ATCTCTATAACGAGAATAGGAAACTACACAAGAATAAACGGCTCAGTAAT
GTTTTCAAGTTCTATCAAGTTACCTTCTTGTAAACCAGGTGCTTTGGGAC
GGTATATAGGCAAGCCATGTGAAGCTCAGCTAGAAAAATATCCATAGCAT
GTGGGACCTGCCTCACAAATGATAATTAATTGAACCCAAAACTTAAATAA
ATTACTGAAAAAAAATCTATATTCATTATATGCTTCCCTGGAGGCTACGA
ATTAAACATGTACCTGAGATGTAACGAGAACAATGACGTAGGCACTAGCA
AAGGGAGCATTACCGGGGTTTTCACAGTATGAAACAACCTGTAAAGTATC
TTGTGAGTTGCCAATTAACTTGGGTTAAGTAGGAGTAAGACTGAGTTTAT
GCATTGAAAATTTAGCAAGGGACAAGAGGGATATAACTTGGAAGTAAAGA
TGGGATAAGATGTCAAACCAAAGGTCAAAGTTTAAATATTTGGATCAATA
ATATAAAATGATGAGAAAATTAATGAGGATGTTACATAAAGGATACAAGT
GGGATGGCTAAAATGGAGAAAGGCAACAGAGTTATTTGTAATTGCAAAGT
ACCTACCAAGCTCATAGGCAAGTTTTATCATACTACTATATGTATGCTAA
TACAATATATTAGTGAATGTTGGCTTTAAAGGGACAAGAGAAAAAGAAAG
GTGTAGCAAAAATGAGTATGTTAAGATGGATGTATGTTAAGATAAGACAA
GATAACCATAGCATACAAGGAGATAGCAGTGTAGCACCAATTGAGAAAAA
GATGACAGAAAACAGGTTAAGGTGGTTTGGCCACGTACAAAGGTCATTAG
AGGCTTGTGAGGAAAGTATATTGCATGAAATTTAGTCATGTGAAAAAGGA
GAAAGAGAGACCAAGAAGGACAATGAGGGAAGTTGTTAAGAGGGATCTCA
TGGCCAATAATATCTCTCGAAGTTTGGTCTTTAATCGAGTCAAATAA

Coding sequence (CDS) from alignment at Chr_1-CM003603.1:2008366..2014512-

>rna-KK1_019949_Cc_Asha_v1.0 ID=rna-KK1_019949_Cc_Asha_v1.0; Name=rna-KK1_019949; organism=Cajanus cajan; type=CDS; length=2916bp; location=Sequence derived from: Chr_1-CM003603.1:2008366..2014512- (Cajanus cajan
ATGGGAGGGAAGAGTTCAAAAGGGAGTGGTAGGAGGTATGAGTATGATTA
TGGTGCTTCTTCATCTTCATGGAATAACCATGGTGGATACCCTTCATCGT
ACCAAACACCTCAGCACCAGCATGCACCAGCACCACCATCAGCTCCATTT
CATGACTATGCACAGCCAAAAAGGAAGTTGGATAGGAAATATTCCAGGAT
AGCTGATAATTACCGTTCTCTGGATGAGATGGGAGGGAAGAGTTCAAAAG
GGAGTGGTAGGAGGTATGAGTATGATTATGGTGCTTCTTCATCTTCATGG
AATAACCATGGTGGATACCCTTCATCGTACCAAACACCTCAGCACCAGCA
TGCACCAGCACCACCATCAGCTCCATTTCATGACTATGCACAGCCAAAAA
GGAAGTTGGATAGGAAATATTCCAGGATAGCTGATAATTACCGTTCTCTG
GATGAGGTTACTGCTGCACTTGCTAATGCTGGGCTGGAATCTTCTAATCT
CATTGTTGGCATTGATTTCACAAAGAGCAATGAGTGGACAGGTTACTGCT
GCACTTGCTAATGCTGGGCTGGAATCTTCTAATCTCATTGTTGGCATTGA
TTTCACAAAGAGCAATGAGTGGACAGGGAAGAGGTCATTCAATCGAAAAA
GTTTACATGACATTGGAAGTGGGCAAAACCCTTATGAACAAGCAATTTCT
ATTATTGGGAAAACGTTATCTGCTTTCGATGAAGATAACATGATTCCTTG
TTTTGGATTTGGAGATGGGAAGAGGTCATTCAATCGAAAAAGTTTACATG
ACATTGGAAGTGGGCAAAACCCTTATGAACAAGCAATTTCTATTATTGGG
AAAACGTTATCTGCTTTCGATGAAGATAACATGATTCCTTGTTTTGGATT
TGGAGATGCATCTACACATGATCAAGATGTATTTAGTTTCTATTCAGAAG
AGAGGTTCTGCAATGGGTTTGAGGAAGTTTTGTCGCGATACAGACAAATT
ATTCCTTACCTCAAACTAGCAGCATCTACACATGATCAAGATGTATTTAG
TTTCTATTCAGAAGAGAGGTTCTGCAATGGGTTTGAGGAAGTTTTGTCGC
GATACAGACAAATTATTCCTTACCTCAAACTAGCAGGACCCACTTCGTTT
GCTCCTGTTATTGAAATGGCTATGACTATTGTTGAACAAACTGGTGGCCA
ATATCATGTCTTGCTAATAATTGCAGATGGACAGGACCCACTTCGTTTGC
TCCTGTTATTGAAATGGCTATGACTATTGTTGAACAAACTGGTGGCCAAT
ATCATGTCTTGCTAATAATTGCAGATGGACAGGTGACTAGAAGCATTGAC
ACACAGCGTGGCTACTTTAGTCCACAGGAGCAGAAGACAGTAGATGCAAT
TGTAAAAGCCAGGTGACTAGAAGCATTGACACACAGCGTGGCTACTTTAG
TCCACAGGAGCAGAAGACAGTAGATGCAATTGTAAAAGCCAGTGAGTATC
CACTGTCAATAGTTTTGGTGGGAGTTGGAGATGGACCATGGGATATGATG
AGGGAATTTGATGATAACATCCCTTCTCGGGCATTTGACAATTTTCAGTG
AGTATCCACTGTCAATAGTTTTGGTGGGAGTTGGAGATGGACCATGGGAT
ATGATGAGGGAATTTGATGATAACATCCCTTCTCGGGCATTTGACAATTT
TCAGTTTGTGAATTTTACTGAAATAATGGCAAGGAATGTCGATTCAATGA
GAAAAGAGACTGAATTTGCCCTTGGAGCTTTGATGGAGATACCTTCTCAA
TATAAGGCAACCATTGAGCTTGGAATATTGGGTTTGTGAATTTTACTGAA
ATAATGGCAAGGAATGTCGATTCAATGAGAAAAGAGACTGAATTTGCCCT
TGGAGCTTTGATGGAGATACCTTCTCAATATAAGGCAACCATTGAGCTTG
GAATATTGGGTGCACGGAGGGGACATTCACCAAATAGGGTTGCTCTACCC
CCACCTCTTTATAATAGGACTTCTTCCAGCATTAGCACAAAATCTTCAGG
GTCAAACAGTTTTCAGCAGAGGGCACCTACACATACTGGCTATAACAGTG
GCGTTCACACAGAGCCATCTACAAGTTCTTTATATGATAATAAGTGCACG
GAGGGGACATTCACCAAATAGGGTTGCTCTACCCCCACCTCTTTATAATA
GGACTTCTTCCAGCATTAGCACAAAATCTTCAGGGTCAAACAGTTTTCAG
CAGAGGGCACCTACACATACTGGCTATAACAGTGGCGTTCACACAGAGCC
ATCTACAAGTTCTTTATATGATAATAAGGTATGCCCCATTTGTCTTACCA
ATGGAAAGGATATGGCCTTTGGTTGTGGGCATCAGGTATGCCCCATTTGT
CTTACCAATGGAAAGGATATGGCCTTTGGTTGTGGGCATCAGGTTATTTG
TAATTGCAAAGTACCTACCAAGCTCATAGGCAAGTTTTATCATACTACTA
TATGTATGCTAATACAATATATTAGTGAATGTTGGGTTATTTGTAATTGC
AAAGTACCTACCAAGCTCATAGGCAAGTTTTATCATACTACTATATGTAT
GCTAATACAATATATTAGTGAATGTTGGCTTGTGAGGAAAGTATATTGCA
TGAAATTTAGTCATGTGAAAAAGGAGAAAGAGAGACCAAGAAGGACAATG
AGGGAAGTTGTTAAGAGGGATCTCATGGCCAATAATATCTCTCGAAGTTT
GGTCTTTAATCGAGTCAAATAACTTGTGAGGAAAGTATATTGCATGAAAT
TTAGTCATGTGAAAAAGGAGAAAGAGAGACCAAGAAGGACAATGAGGGAA
GTTGTTAAGAGGGATCTCATGGCCAATAATATCTCTCGAAGTTTGGTCTT
TAATCGAGTCAAATAA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR002035	VWF_A
IPR010734	Copine_C
IPR036465	vWFA_dom_sf

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