rna-KK1_004599

Transcript Overview
Namerna-KK1_004599
Unique Namerna-KK1_004599_Cc_Asha_v1.0
TypemRNA
OrganismCajanus cajan (pigeon pea)
Sequence length1263
ProductF-box protein At4g12560 family
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_11-CM003613.1supercontigChr_11-CM003613.1:48504522..48505784 -Cajanus cajan Asha genome v1.0n/a
Chr_11-CM003613.1supercontigChr_11-CM003613.1:48504522..48505784 -Cajanus cajan Asha genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Cajanus cajan Asha genome v1.02019-09-17
BLAST: C. cajan Asha genome v1.0 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
cccrR0358Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
cccrR0470Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ccpsR308Pisum sativum Cameor genome v1aPisum sativum
ccpsR363Pisum sativum Cameor genome v1aPisum sativum
ccpsR371Pisum sativum Cameor genome v1aPisum sativum
ccccL028Cajanus cajan Asha genome v1.0Cajanus cajan
caiccL0077Cicer arietinum ICC 4958 genome v2Cicer arietinum
ccpvR0524Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccpvR0587Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccvuR0543Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccvuR0576Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caiccL0936Cicer arietinum ICC 4958 genome v2Cicer arietinum
caccL0068Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caccL0986Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
anccL0283Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccL0544Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccL0734Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccL1049Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asccL0082Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asccL0319Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cctifR0382Vicia faba cv. Tiffany genome v1.0Vicia faba
cctifR0469Vicia faba cv. Tiffany genome v1.0Vicia faba
ccvfhR0391Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccvfhR0425Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccvfhR0482Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccvrvR0409Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccvrvR0495Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccvssR0428Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccvuaR0457Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
ccvuaR0509Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
ccvssR0493Vicia sativa cv. Studenica genome v1.0Vicia sativa
canccL0069Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canccL0988Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjccL0214Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjccL0441Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carccL0074Cicer arietinum
carccL1054Cicer arietinum
ccccaR0531Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccccaR0659Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccvumR0497Vigna umbellata FF25 genome v1.0Vigna umbellata
ccvumR0613Vigna umbellata FF25 genome v1.0Vigna umbellata

Orthologs
Gene/TranscriptAssemblySpecies
rna-XM_027336796.1Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Vfaba.Tiffany.R1.4g185160.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Ca_00696Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Cr_22172.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Va01G100340.2Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Psat4g004720.1Pisum sativum Cameor genome v1aPisum sativum
rna-TanjilR_27174Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vfaba.Hedin2.R1.1g446560.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-XM_004486166.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
LR48_mrnaVigan01g324500Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vum_01G04119.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vfaba.Tiffany.R1.1g366160.1Vicia faba cv. Tiffany genome v1.0Vicia faba
rna-TanjilR_17835Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Phvul.003G084100.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vigun03g441300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Cr_00738.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
rna-XM_014654744.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
jg48520.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Hedin2.R1.4g241400.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Psat1g175680.1Pisum sativum Cameor genome v1aPisum sativum
Ca_03418Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
jg39130.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Ca_02155.1Cicer arietinum ICC 4958 genome v2Cicer arietinum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Cc_v2.0_28134.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-KK1_004599gene-KK1_004599_Cc_Asha_v1.0Cajanus cajangene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-KK1_004599rna-KK1_004599_Cc_Asha_v1.0-proteinCajanus cajanpolypeptide
rna-KK1_004599_Cc_Asha_v1.0rna-KK1_004599_Cc_Asha_v1.0Cajanus cajanpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-KK1_004599_Cc_Asha_v1.0-CDS-Chr_11-CM003613.1_Cc_Asha_v1.0-1571847872:48504522..48505784rna-KK1_004599_Cc_Asha_v1.0-CDS-Chr_11-CM003613.1_Cc_Asha_v1.0-1571847872:48504522..48505784Cajanus cajanCDS
rna-KK1_004599_Cc_Asha_v1.0-CDS-Chr_11-CM003613.1_Cc_Asha_v1.0-1571082112:48504522..48505784rna-KK1_004599_Cc_Asha_v1.0-CDS-Chr_11-CM003613.1_Cc_Asha_v1.0-1571082112:48504522..48505784Cajanus cajanCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-KK1_004599_Cc_Asha_v1.0-exon-Chr_11-CM003613.1_Cc_Asha_v1.0-1571847872:48504522..48505784rna-KK1_004599_Cc_Asha_v1.0-exon-Chr_11-CM003613.1_Cc_Asha_v1.0-1571847872:48504522..48505784Cajanus cajanexon
rna-KK1_004599_Cc_Asha_v1.0-exon-Chr_11-CM003613.1_Cc_Asha_v1.0-1571082112:48504522..48505784rna-KK1_004599_Cc_Asha_v1.0-exon-Chr_11-CM003613.1_Cc_Asha_v1.0-1571082112:48504522..48505784Cajanus cajanexon


Homology
BLAST of rna-KK1_004599 vs. DB:Swiss
Match: CPR1_ARATH (F-box protein CPR1 OS=Arabidopsis thaliana OX=3702 GN=CPR1 PE=1 SV=2)

HSP 1 Score: 203.371 bits (516), Expect = 1.041e-59
Identity = 129/375 (34.40%), Postives = 207/375 (55.20%), Query Frame = 1
Query:    1 MANLPVEVITEILSRLPVKSLLRCRSTCKCWRSLIDTTHFILFHL-----TKSHTALIIRHRSHLYSLDPQTLNCHHKPLELTHPLMCYSNSIKVLGSCNGLLCISNVADDIALWNPSLRRHRILPADRFHRPESSLFAARV-YGFGFDALSNDYKLVSITYF-VDLHNR---TFDSQVQLYTLKSDAWRNLPNMP----------YALCCARTMGVFVSSSLHWVVTRKLEPDQPDLVVAFDLTRERFREVPLPVTVT-GNFD--MEVALLGGCLSVVENRGNAF-DVWVMRQYGLRDTWVKLFTLSDNVHTGSVK-FKSVRPLAFDHERDRVLFEQNRSKLCWYDLGSGEVGYVQITGMGNSIEGTVCVGSLV 1050
            MA +P++++ +I  RLP K+L+RCR+  K    LI+   FI  HL     T  H  +++R    LYS+D  +L+      ++ HP M      +V GS NGL+ +SN   D+A++NPS R+   LP      P+ S     V YG G+D++S+DYK+V +  F +D  +    +F  +V++++LK ++W+ + ++           Y L   R  GV   +SLHWV+ R+      +L+V FDL  E F  V  P  V  GN D  M++ +L GCL ++ N   ++ DVW+M++Y +RD+W K+FT+       SVK F  +RPL +  ++ +VL E N +KL W+DL S ++  ++I    +S    + V SLV
Sbjct:    1 MATIPMDIVNDIFLRLPAKTLVRCRALSKPCYHLINDPDFIESHLHRVLQTGDHLMILLRGALRLYSVDLDSLDSVS---DVEHP-MKRGGPTEVFGSSNGLIGLSNSPTDLAVFNPSTRQIHRLPPSSIDLPDGSSTRGYVFYGLGYDSVSDDYKVVRMVQFKIDSEDELGCSFPYEVKVFSLKKNSWKRIESVASSIQLLFYFYYHLLYRRGYGVLAGNSLHWVLPRRPGLIAFNLIVRFDLALEEFEIVRFPEAVANGNVDIQMDIGVLDGCLCLMCNYDQSYVDVWMMKEYNVRDSWTKVFTVQ---KPKSVKSFSYMRPLVYSKDKKKVLLELNNTKLVWFDLESKKMSTLRIKDCPSSYSAELVVSSLV 368          
BLAST of rna-KK1_004599 vs. DB:Swiss
Match: FB244_ARATH (F-box protein At4g22390 OS=Arabidopsis thaliana OX=3702 GN=At4g22390 PE=2 SV=3)

HSP 1 Score: 139.428 bits (350), Expect = 8.227e-36
Identity = 103/371 (27.76%), Postives = 184/371 (49.60%), Query Frame = 1
Query:    1 MANLPVEVITEILSRLPVKSLLRCRSTCKCWRSLIDTTHFILFHL-----TKSHTALIIRHRSHLYSLDPQTLNCHHKPLELTHPLMCYSNSIKVLGSCNGLLCISNVADDIALWNPSLRRHRILPADRFHRPESSLFAARV-YGFGFDALSNDYKLVSITY-FVDLHNRTFDS--QVQLYTLKSDAWRNLPNM----------PYALCCARTMGVFVSSSLHWVVTRKLEPDQPDLVVAFDLTRERFREVPLPVTVTGNFDMEVALLGGCLSVV-ENRGNAFDVWVMRQYGLRDTWVKLFTLSDNVHTGSVKFKSVRPLAFDHERDRVLFE-QNRSKLCWYDLGSGEVGYVQITGMGNSIEGTVCVGSLV 1050
            MA  P ++I E+  RL   +L++CR   K   SLID+  F+  HL     T  H  +++R    L +++   L+      ++ HPL       +V GS NG++ + N   D+A++NPS R+   LP +    PE  +    V YG G+D++ +D+K+V I    +    + F    +V++++LK ++W+ +  M           Y L   R  GV V++ LHW++ R+      + ++ +DL  +    +  P  +    +M++ +L GC+ ++  +  +  DVWV+++Y    +W KL+ +       SV+F  +RPL    +R ++L E  N + L W+DL S  +    I    +S    + V SLV
Sbjct:    1 MAECPTDLINEMFLRLRATTLVKCRVLSKPCFSLIDSPEFVSSHLRRRLETGEHLMILLRGPRLLRTVE---LDSPENVSDIPHPLQA-GGFTEVFGSFNGVIGLCNSPVDLAIFNPSTRKIHRLPIEPIDFPERDITREYVFYGLGYDSVGDDFKVVRIVQCKLKEGKKKFPCPVEVKVFSLKKNSWKRVCLMFEFQILWISYYYHLLPRRGYGVVVNNHLHWILPRRQGVIAFNAIIKYDLASDDIGVLSFPQELYIEDNMDIGVLDGCVCLMCYDEYSHVDVWVLKEYEDYKSWTKLYRVPKPESVESVEF--IRPLICSKDRSKILLEINNAANLMWFDLESQSLTTAGIE-CDSSFTADILVSSLV 364          
BLAST of rna-KK1_004599 vs. DB:Swiss
Match: FBK67_ARATH (F-box/kelch-repeat protein At3g23880 OS=Arabidopsis thaliana OX=3702 GN=At3g23880 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 6.626e-33
Identity = 108/371 (29.11%), Postives = 176/371 (47.44%), Query Frame = 1
Query:    7 NLPVEVITEILSRLPVKSLLRCRSTCKCWRSLIDTTHFILFHL-----------TKSHTALIIRHRSHLYSLDPQTL-NCHHKPLELTHPLMCYSNSIKVLGSCNGLLCISNVAD-DIALWNPSLRRHRILPADRFHRPESSLFAARVYGFGFDALSNDYKLVSITYFVDLHNR-TFDSQVQLYTLKSDAWRNLPNMPYALCCART--MGVFVSSSLHWVVTRKLEPDQPDLVVAFDLTRERFREVPLPVTVT-GNFDMEVALLGGCLSVV-ENRGNAFDVWVMRQYGLRDTWVKLFTLSDNVHTGSVKFKSVRPLAFDHERDRVLFEQNRSKLCWYDLGSGEVGYVQITGMGNSIEGTVCVGSLVPPSLL 1065
            NLP+E++ EIL RLPVKSL R +  C  WRSLI  T F L H            TKS   +I   R HL S    +L N     +      +   +  +V+G+C+GL+C     D  + LWNP+++  + L +      +        YGFG+D   +DYK+V++     L  R     + ++Y+ +   WR+  + P  +  A     G++++ +L+              ++++D++R+ F+E+P PV    G F M +  L GCLS+V   +G   DVWVM+++G   +W KL ++      G   F  VRPL        V+  + RS L  Y+  +G   Y     +    +  V + ++V P+ L
Sbjct:   13 NLPLEMMEEILLRLPVKSLTRFKCVCSSWRSLISETLFALKHALILETSKATTSTKSPYGVITTSRYHLKSCCIHSLYNASTVYVSEHDGELLGRDYYQVVGTCHGLVCFHVDYDKSLYLWNPTIKLQQRLSSSDLETSDDECVVT--YGFGYDESEDDYKVVAL-----LQQRHQVKIETKIYSTRQKLWRSNTSFPSGVVVADKSRSGIYINGTLN---WAATSSSSSWTIISYDMSRDEFKELPGPVCCGRGCFTMTLGDLRGCLSMVCYCKGANADVWVMKEFGEVYSWSKLLSIP-----GLTDF--VRPLWISD--GLVVLLEFRSGLALYNCSNGRFHYPVSNSISGCRDAKVYLKTMVSPNDL 364          
BLAST of rna-KK1_004599 vs. DB:Swiss
Match: FBK50_ARATH (F-box/kelch-repeat protein At3g06240 OS=Arabidopsis thaliana OX=3702 GN=At3g06240 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 9.715e-33
Identity = 117/415 (28.19%), Postives = 187/415 (45.06%), Query Frame = 1
Query:   10 LPVEVITEILSRLPVKSLLRCRSTCKCWRSLIDTTHFILFHLTKSHTALIIRHRS-------------HLYSLDPQTLNC---------HHKPLE-----LTHPLMCY---------------------SNSIKVLGSCNGLLCISNVADDIALWNPSLRRHRILPADRFHRPESSLFAA---RVYGFGFDALSNDYKLVSITYFVDLHNRTFDSQVQLYTLKSDAWRNLPNMPYALC-CARTMGVFVSSSLHWVVTRKLEPDQPDLVVAFDLTRERFREVPLPVT-----------VTGNFDMEVALLGGCLSVVENRGNAFDVWVMRQYGLRDTWVKLFTLSDNVHTGSVKFKSVRPLAFDHERDRVLFEQNRSKLCWYDLGSGEVGYVQITG--MGNSIEGTVCVGSLVPPS 1059
            LP E+ITEIL RLP KS+ R R   K + +L     F   HL      LI+R+ S             +LYSLD  ++           H+ PL+      +  +  Y                      N ++++GS NGL+CIS     + L+NP+    + LP +   RP+S  +     + YGFGFD L++DYKLV +   V       D+ V  Y+LK+D+WR + N+ Y     + T GV  + ++HWV T      +  +VVAFD+  E FRE+P+P             V G+ +  + ++  C  V +      D+WVM +YG   +W ++          ++ ++S++PL      + VL E +   L  Y+  +     + I G  + +  E    V SL+ P+
Sbjct:   36 LPPEIITEILLRLPAKSIGRFRCVSKLFCTLSSDPGFAKIHLD-----LILRNESVRSLHRKLIVSSHNLYSLDFNSIGDGIRDLAAVEHNYPLKDDPSIFSEMIRNYVGDHLYDDRRVMLKLNAKSYRRNWVEIVGSSNGLVCISPGEGAVFLYNPTTGDSKRLPEN--FRPKSVEYERDNFQTYGFGFDGLTDDYKLVKL---VATSEDILDASV--YSLKADSWRRICNLNYEHNDGSYTSGVHFNGAIHWVFTESRHNQR--VVVAFDIQTEEFREMPVPDEAEDCSHRFSNFVVGSLNGRLCVVNSCYDVHD------DIWVMSEYGEAKSWSRIRI--------NLLYRSMKPLCSTKNDEEVLLELD-GDLVLYNFETNASSNLGICGVKLSDGFEANTYVESLISPN 421          
BLAST of rna-KK1_004599 vs. DB:Swiss
Match: FB135_ARATH (F-box protein At3g07870 OS=Arabidopsis thaliana OX=3702 GN=At3g07870 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 4.827e-30
Identity = 109/393 (27.74%), Postives = 174/393 (44.27%), Query Frame = 1
Query:    1 MANLPVEVITEILSRLPVKSLLRCRSTCKCWRSLIDTTHFILFHLTKSHTALIIRH-----RSHLYSLDPQTLNCHHKPLELTHPLMCYSNSIKVLGSCNGLLCISN--VADDIALWNPSLRRHRILP--ADRFHRPESSLFAARVYGFGFDALSNDYKLVSITYFVDLHN------------RTFDSQVQLYTLKSD------AWRNLPNMPYALCCARTMGVFVSSSLHWVV-TRKLEPDQPDLVVAFDLTRERFREVPLPVTVTGN-FDMEVALLGGCL-SVVENRGNAFDVWVMRQYGLRDTWVKLFTLSDNVHTG--------------SVKFKSVRPLAFDHERDRVLFEQNRSKLCWYDLGSGEVGYVQITGMGNSIEGTVCVGSL 1047
            + +LP ++I +I SRLP+ S+ R    C+ WRS++     +    +      ++ H     R+ L+ LD        K  + T           V+GSCNGLLC+S+    D + L+NP       LP  ++++H  E       V+GFGF  ++ +YK++ I YF    +            +   S+VQ+ TL S       +WR+L   PY     R+    V+  LH+V   R+  PD+    V+FDL  E F+E+P P     N  +  +  L GCL +VV       D+WVM+ YG++++W K +++   +  G              +   K VR L    E   +L E     L  YD   G+   +   G+ N     V  G+L
Sbjct:   25 LESLPEDIIADIFSRLPISSIARLMFVCRSWRSVLTQHGRLSSSSSSPTKPCLLLHCDSPIRNGLHFLDLSEEEKRIKTKKFTLRFASSMPEFDVVGSCNGLLCLSDSLYNDSLYLYNPFTTNSLELPECSNKYHDQE------LVFGFGFHEMTKEYKVLKIVYFRGSSSNNNGIYRGRGRIQYKQSEVQILTLSSKTTDQSLSWRSLGKAPYKF-VKRSSEALVNGRLHFVTRPRRHVPDRK--FVSFDLEDEEFKEIPKPDCGGLNRTNHRLVNLKGCLCAVVYGNYGKLDIWVMKTYGVKESWGKEYSIGTYLPKGLKQNLDRPMWIWKNAENGKVVRVLCL-LENGEILLEYKSRVLVAYDPKLGKFKDLLFHGLPNWFHTVVHAGTL 407          
BLAST of rna-KK1_004599 vs. DB:Swiss
Match: FB138_ARATH (Putative F-box protein At3g10430 OS=Arabidopsis thaliana OX=3702 GN=At3g10430 PE=4 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.200e-21
Identity = 72/242 (29.75%), Postives = 119/242 (49.17%), Query Frame = 1
Query:    4 ANLPVEVITEILSRLPVKSLLRCRSTCKCWRSLI-DTTHFILFHLTKSHTALI-IRHRSHLYSLDPQT--LNCHHKPLELTHPLMCYSNSIKVLGSCNGL---LCISNVADD--IALWNPSLRRHR-ILPADRFHRPESSLFAARVYGFGFD-ALSNDYKLVSITYFVDLHNRTFDSQVQLYTLKSDAWRNLPNMPYALCCARTMGVFVSSSLHWVVTRKLEPDQPDLVVAFDLTRERFREV 696
            ++LP ++I EIL R P +SLLR +STCK W  LI +   F+  HL KS    + I +R  +  LDP T  L     P EL H           L  C+GL   +C   +  D  +A+WNP +R+ + I P+     P    + +   GFG+D    ++YK++  TY  D  +     + Q+Y   S +WR++             GV V+ S++W+  +    ++ + +++FD ++E F  +
Sbjct:    3 SSLPFDLILEILQRTPAESLLRFKSTCKKWYELISNDKRFMYKHLDKSTKRFLRIENRERVQILDPVTEILAVSTIPNELRHKYF-------TLIHCDGLMLGMCYEELGSDPNLAVWNPVMRKIKWIKPSP----PLVCYWGSDYLGFGYDKTFRDNYKILRFTYLGDDDDDESYPKCQIYEFNSGSWRSIEAKFDGEIDVEVDGVSVNGSMYWIELQ----EKKNFILSFDFSKETFNRI 229          
BLAST of rna-KK1_004599 vs. DB:Swiss
Match: FBW1_ARATH (F-box/WD-40 repeat-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=FBW1 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.397e-19
Identity = 100/376 (26.60%), Postives = 162/376 (43.09%), Query Frame = 1
Query:   10 LPVEVITEILSRLPVKSLLRCRSTCKCWRSLIDTTHFILFHLT--KSHTALIIRHRSHLYSLDPQTLNCHHKPLELTHPLMCYSNSIKVLGSCNGLLCISNVADDIALWNPSLRRHRILPADRFHRPESSLFAARVYGFGFDALSND-YKLVSITYFVDLHNR-----TFDSQVQLYTLKSDAWRNLPNMPYALCCARTMGVFVSSSLHWVVTRKLEPDQPDLVVAFDLTRERFREV-PLPVTV-TGNFDMEVALLGGCLSVV--ENRGNAFDVWVMRQY--GLRDTWVKLFTLSDNVHTGSVKFKSVR-PLAFDHERDR-------VLFEQNRSKLCWYDLGSGEV---GYVQITGMGNS---IEGTVCVGSLVP 1053
            LP E+  EIL R+P KSLLR + TCK W +L +   FI  HL   + H   IIR    +  ++P    C    L     +      I  +  C+GLL        +A+WNP L + R +          S      YG G+D LS D YK++     V   N      ++  +V +Y LKS++W+            R  G+ +  +++W+     +PD    + +F+ + E F  +  LPV     N     A  G  LS++      +  DVWV  +   G+   W KLF+++       + F+++  P+ F  + +R       VL ++    +  Y +G  E+     ++   +G S   I G   + SLVP
Sbjct:   38 LPFELFEEILCRVPTKSLLRLKLTCKRWLALFNDKRFIYKHLALVREH---IIRTNQMVKIINPVVGACSSFSLPNKFQV---KGEIYTMVPCDGLLLCIFETGSMAVWNPCLNQVRWI-----FLLNPSFRGCSCYGIGYDGLSRDSYKILRFVNGVFTKNEYANTGSYKPEVDIYELKSNSWKTFKVSLDWHVVLRCKGLSLKGNMYWIAKWNRKPDI--FIQSFNFSTETFEPLCSLPVRYDVHNVVALSAFKGDNLSLLHQSKETSKIDVWVTNKVKNGVSILWTKLFSVTRPDLPVLLAFENLSYPVHFIDKNNRIVVCCEEVLADKRNVAVNIYVIGEDEIKSQDEIEQHQLGFSWPFISGYTYLPSLVP 400          
BLAST of rna-KK1_004599 vs. DB:Swiss
Match: FB145_ARATH (Putative F-box protein At3g16210 OS=Arabidopsis thaliana OX=3702 GN=At3g16210 PE=4 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.063e-19
Identity = 82/316 (25.95%), Postives = 141/316 (44.62%), Query Frame = 1
Query:   10 LPVEVITEILSRLPVKSLLRCRSTCKCWRSLIDTTHFILFHLTKSHTALIIRHRSHLYSLD-----PQTLNCHHKPLELTHPLMCYSNSIKVLGSCNGLLCISNVADDIALWNPSLRRHRILPADRFHRPESSLFAARVYGFGFDALSNDYKLVSITYFVDLHNRTFDSQVQLYTLKSDAWRNLPNMPYALCCART-MGVFVSSSLHWVVTRKLEPDQPDLVVAFDLTRERFREVPLPVTVTGNFDMEVALLGG--CLSVVENRGNAFDVWVMRQYGLRDTWVKLFTLSDNVHTGSVKFKSVRPLAFDHERDRVLF 933
            LP E+  EIL RL +K L R R  CK WR LI+   F   +   S    +  +  + Y LD     P   N    PL+ +        S  VL  C+G LC++     + +WNP  ++ +I+P    ++       + + GFG+D + +DYK+V+   F+D   R   S   ++  ++ +W     + Y     R   G F+   L+W+  R         ++ F+L+   +R++PLPV   G     + +     C++  E       + VM + G   +W K+ +LS +       F SV+   +D++ + V F
Sbjct:    5 LPEELAIEILVRLSMKDLARFRCVCKTWRDLINDPGFTETYRDMSPAKFVSFYDKNFYMLDVEGKHPVITNKLDFPLDQS----MIDESTCVL-HCDGTLCVTLKNHTLMVWNPFSKQFKIVPNPGIYQ------DSNILGFGYDPVHDDYKVVT---FID---RLDVSTAHVFEFRTGSWGESLRISYPDWHYRDRRGTFLDQYLYWIAYRS---SADRFILCFNLSTHEYRKLPLPVYNQGVTSSWLGVTSQKLCITEYEMCKKEIRISVMEKTG---SWSKIISLSMS------SFISVQDRIYDYQVEFVSF 291          
BLAST of rna-KK1_004599 vs. DB:Swiss
Match: FB179_ARATH (Putative F-box protein At3g23260 OS=Arabidopsis thaliana OX=3702 GN=At3g23260 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.687e-18
Identity = 91/334 (27.25%), Postives = 149/334 (44.61%), Query Frame = 1
Query:    7 NLPVEVITEILSRLPVKSLLRCRSTCKCWRSLIDTTHFILFH---LTKSHTALIIR-HRSHLYSLDPQTL-NCHHKPLELTHPLMCYSNSIKVLGSCNGLLCISNVADD-IALWNPSLRRHRILPADRFHRPESSLFAARVYGFGFDALSN--DYKLVSITYFVDLHNRTFDSQVQLYTLKSDAWRNLPNMPYALCCARTMGVFVSSSLHWVVTRKLEPDQPDLVVAFDLTRERFREV----PLPVTVTGNFDMEVALLGG-CLSVVENRGNA---FDVWVMRQYGLRDTWVKLFTLSDNVHTGSVKFKSVRPLAFDHERDRVLFEQNRSKLCW 960
            +LPVE+  EILSR+P K L R RST K W +L  T  F   H    TK    ++++  R +L S++   + N   +  EL   L      I  +  C+GLL + ++ ++ + +WNP     +++     +  ES  +A      G+D  S+   YK++ +   V +    F  + ++Y   +D+WR +      L   +   V V  S +WVV  +  P +    ++FD + ERF+ +    P P  VT   D+ V      CL    N        +VWV    G   +W K  T         ++    R   FD+    ++ EQN+S +CW
Sbjct:    5 SLPVELQEEILSRVPAKYLARLRSTSKQWNALSKTGSFAKKHSANATKEPLIIMLKDSRVYLASVNLHGVHNNVAQSFELGSRLYLKDPHISNVFHCDGLLLLCSIKENTLEVWNPCSGEAKLIKPRHSYYKESDFYA-----LGYDNKSSCKKYKVLRVISQVHVQG-DFKIEYEIYDFTNDSWR-VHGATTELSIRQKHPVSVKGSTYWVVRNRYFPYK--YFLSFDFSTERFQSLSLPQPFPYLVT---DLSVVREEQLCLFGYYNWSTTSEDLNVWVTTSLGSVVSWSKFLT---------IQIIKPRVDMFDYGMSFLVDEQNKSLVCW 317          
BLAST of rna-KK1_004599 vs. DB:Swiss
Match: FBK59_ARATH (F-box/kelch-repeat protein At3g17530 OS=Arabidopsis thaliana OX=3702 GN=At3g17530 PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 1.046e-17
Identity = 67/246 (27.24%), Postives = 126/246 (51.22%), Query Frame = 1
Query:    1 MANLPVEVITEILSRLPVKSLLRCRSTCKCWRSLIDTTHFILFHLTKSHT-ALIIRHRSHLY--SLDPQTLNCHHKP-LELTHPLMCYSNS----IKVLGSCNGL-LCISNVADDIALWNPSLRRHRILPADRFHRPESSLFAARVYGFGFDALS-NDYKLV-SITYFVDLHNRTFDSQVQLYTLKSDAWRNLPNMPYALCCARTMGVFVSSSLHWVVTRKLEPDQPDLVVAFDLTRERFREVPLP 705
            +++LP ++ +EILSR+P KSL + ++TCK W +L     F+  +  K+    +I+   S +Y  S++ Q +N    P +E+T  L+  ++S    I  +  C+GL LC +  +  + +WNP     R +    F+R           G+G    S + YK++ S  Y+VD +     ++ ++Y   +D+WR+L ++   +    + GV +  + +WV   K   ++   +  FD ++E F  +PLP
Sbjct:    3 ISDLPHDLESEILSRVPAKSLAKWKTTCKRWYALFRDPSFVKKNFDKAGGREMIVLMNSRVYSNSVNLQGINNRFDPSMEVTGKLIKLNDSKGVDISAIFHCDGLILCTTTESTGLVVWNPCTGEIRCIKPRIFYRCNDRY----ALGYGNSKSSCHSYKILRSCCYYVDQNLSLMAAEFEIYDFSTDSWRDLGDITRDM-IVYSSGVSLKGNTYWVSGSK---EKGFFMRYFDFSKEVFGRLPLP 240          
The following BLAST results are available for this feature:
BLAST of rna-KK1_004599 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: C. cajan Asha genome v1.0 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
CPR1_ARATH1.041e-5934.40F-box protein CPR1 OS=Arabidopsis thaliana OX=3702... [more]
FB244_ARATH8.227e-3627.76F-box protein At4g22390 OS=Arabidopsis thaliana OX... [more]
FBK67_ARATH6.626e-3329.11F-box/kelch-repeat protein At3g23880 OS=Arabidopsi... [more]
FBK50_ARATH9.715e-3328.19F-box/kelch-repeat protein At3g06240 OS=Arabidopsi... [more]
FB135_ARATH4.827e-3027.74F-box protein At3g07870 OS=Arabidopsis thaliana OX... [more]
FB138_ARATH1.200e-2129.75Putative F-box protein At3g10430 OS=Arabidopsis th... [more]
FBW1_ARATH2.397e-1926.60F-box/WD-40 repeat-containing protein 1 OS=Arabido... [more]
FB145_ARATH4.063e-1925.95Putative F-box protein At3g16210 OS=Arabidopsis th... [more]
FB179_ARATH1.687e-1827.25Putative F-box protein At3g23260 OS=Arabidopsis th... [more]
FBK59_ARATH1.046e-1727.24F-box/kelch-repeat protein At3g17530 OS=Arabidopsi... [more]
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InterPro
Analysis Name: Cajanus cajan Asha genome v1.0
Date Performed: 2019-09-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainSMARTSM00256fbox_2coord: 4..44
e-value: 7.7E-11
score: 52.0
IPR001810F-box domainPFAMPF00646F-boxcoord: 2..37
e-value: 2.9E-11
score: 43.0
IPR001810F-box domainPROSITEPS50181FBOXcoord: 1..45
score: 12.359
IPR017451F-box associated interaction domainTIGRFAMTIGR01640TIGR01640coord: 93..309
e-value: 3.6E-31
score: 106.2
NoneNo IPR availableGENE3D1.20.1280.50coord: 1..40
e-value: 5.2E-10
score: 40.9
IPR006527F-box associated domain, type 1PFAMPF07734FBA_1coord: 196..336
e-value: 2.4E-7
score: 30.8
IPR011043Galactose oxidase/kelch, beta-propellerSUPERFAMILY50965Galactose oxidase, central domaincoord: 29..286
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 1..79

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-KK1_004599_Cc_Asha_v1.0 ID=rna-KK1_004599_Cc_Asha_v1.0; Name=rna-KK1_004599; organism=Cajanus cajan; type=mRNA; length=1263bp
ATGGCAAATCTTCCGGTGGAAGTAATCACCGAAATCCTCTCCCGTCTGCC
GGTGAAGTCGCTCCTCCGGTGCCGCTCCACCTGCAAGTGCTGGCGCTCGC
TAATCGACACCACGCACTTCATCCTCTTCCATCTCACCAAGTCCCACACC
GCGCTCATTATCCGCCACCGCTCGCACCTCTATTCTCTCGACCCCCAAAC
CCTAAACTGCCACCACAAGCCTCTGGAATTGACGCACCCTCTCATGTGCT
ACAGCAACAGCATCAAGGTCCTCGGCTCCTGCAATGGTCTCCTCTGCATC
TCCAACGTCGCCGACGACATCGCCCTCTGGAACCCCTCCCTCCGCCGCCA
CCGCATCCTCCCCGCCGACCGCTTCCACCGCCCGGAGTCCTCCCTCTTCG
CCGCCCGCGTCTACGGCTTCGGCTTCGACGCCCTCTCCAACGACTACAAG
CTCGTCAGCATCACCTACTTCGTCGACCTCCACAACCGCACCTTCGATTC
CCAGGTCCAGCTCTATACCCTAAAATCCGACGCCTGGAGAAACCTCCCCA
ACATGCCCTACGCGCTCTGCTGCGCGCGTACCATGGGCGTCTTCGTTTCC
TCCTCCCTCCACTGGGTCGTCACGCGCAAACTCGAGCCCGACCAGCCCGA
TTTAGTCGTCGCGTTTGACCTCACGCGCGAGCGCTTCCGTGAAGTCCCGC
TTCCGGTTACTGTCACCGGGAATTTCGACATGGAGGTTGCTCTTCTCGGA
GGGTGTCTCTCCGTGGTGGAGAACAGGGGAAACGCGTTTGACGTGTGGGT
TATGAGGCAGTACGGATTGCGTGACACGTGGGTCAAGCTCTTTACTCTCT
CTGACAACGTTCACACGGGATCGGTCAAATTCAAATCTGTGAGGCCCTTG
GCTTTTGATCACGAGAGGGATAGGGTTTTGTTTGAGCAGAACCGTAGCAA
GCTGTGTTGGTATGATCTTGGAAGTGGTGAAGTGGGGTACGTGCAAATAA
CAGGGATGGGAAACTCGATTGAAGGCACGGTTTGCGTGGGAAGCCTCGTC
CCCCCGAGTTTGCTGTGTCATGATGAGAGATTGGGGCACGAGAACATTAG
GAAGAAAAGGTATACAATACCAATGCTCATTCATTGTTGTTTCAATCAAA
ATCAATCTGTTATCTCTGTTTTCACCTTCAGGAACGGCAAGCTTTTAATT
TTACTTTTATTATTGTACTGTGTACTGTGTGGTGTGTGGTTCTGTAAATT
CTGTTCTGTCTAG
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protein sequence of rna-KK1_004599_Cc_Asha_v1.0

>rna-KK1_004599_Cc_Asha_v1.0 ID=rna-KK1_004599_Cc_Asha_v1.0; Name=rna-KK1_004599_Cc_Asha_v1.0; organism=Cajanus cajan; type=polypeptide; length=420bp
MANLPVEVITEILSRLPVKSLLRCRSTCKCWRSLIDTTHFILFHLTKSHT
ALIIRHRSHLYSLDPQTLNCHHKPLELTHPLMCYSNSIKVLGSCNGLLCI
SNVADDIALWNPSLRRHRILPADRFHRPESSLFAARVYGFGFDALSNDYK
LVSITYFVDLHNRTFDSQVQLYTLKSDAWRNLPNMPYALCCARTMGVFVS
SSLHWVVTRKLEPDQPDLVVAFDLTRERFREVPLPVTVTGNFDMEVALLG
GCLSVVENRGNAFDVWVMRQYGLRDTWVKLFTLSDNVHTGSVKFKSVRPL
AFDHERDRVLFEQNRSKLCWYDLGSGEVGYVQITGMGNSIEGTVCVGSLV
PPSLLCHDERLGHENIRKKRYTIPMLIHCCFNQNQSVISVFTFRNGKLLI
LLLLLYCVLCGVWFCKFCSV
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mRNA from alignment at Chr_11-CM003613.1:48504522..48505784-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-KK1_004599_Cc_Asha_v1.0 ID=rna-KK1_004599_Cc_Asha_v1.0; Name=rna-KK1_004599; organism=Cajanus cajan; type=mRNA; length=1263bp; location=Sequence derived from: Chr_11-CM003613.1:48504522..48505784- (Cajanus cajan
ATGGCAAATCTTCCGGTGGAAGTAATCACCGAAATCCTCTCCCGTCTGCC GGTGAAGTCGCTCCTCCGGTGCCGCTCCACCTGCAAGTGCTGGCGCTCGC TAATCGACACCACGCACTTCATCCTCTTCCATCTCACCAAGTCCCACACC GCGCTCATTATCCGCCACCGCTCGCACCTCTATTCTCTCGACCCCCAAAC CCTAAACTGCCACCACAAGCCTCTGGAATTGACGCACCCTCTCATGTGCT ACAGCAACAGCATCAAGGTCCTCGGCTCCTGCAATGGTCTCCTCTGCATC TCCAACGTCGCCGACGACATCGCCCTCTGGAACCCCTCCCTCCGCCGCCA CCGCATCCTCCCCGCCGACCGCTTCCACCGCCCGGAGTCCTCCCTCTTCG CCGCCCGCGTCTACGGCTTCGGCTTCGACGCCCTCTCCAACGACTACAAG CTCGTCAGCATCACCTACTTCGTCGACCTCCACAACCGCACCTTCGATTC CCAGGTCCAGCTCTATACCCTAAAATCCGACGCCTGGAGAAACCTCCCCA ACATGCCCTACGCGCTCTGCTGCGCGCGTACCATGGGCGTCTTCGTTTCC TCCTCCCTCCACTGGGTCGTCACGCGCAAACTCGAGCCCGACCAGCCCGA TTTAGTCGTCGCGTTTGACCTCACGCGCGAGCGCTTCCGTGAAGTCCCGC TTCCGGTTACTGTCACCGGGAATTTCGACATGGAGGTTGCTCTTCTCGGA GGGTGTCTCTCCGTGGTGGAGAACAGGGGAAACGCGTTTGACGTGTGGGT TATGAGGCAGTACGGATTGCGTGACACGTGGGTCAAGCTCTTTACTCTCT CTGACAACGTTCACACGGGATCGGTCAAATTCAAATCTGTGAGGCCCTTG GCTTTTGATCACGAGAGGGATAGGGTTTTGTTTGAGCAGAACCGTAGCAA GCTGTGTTGGTATGATCTTGGAAGTGGTGAAGTGGGGTACGTGCAAATAA CAGGGATGGGAAACTCGATTGAAGGCACGGTTTGCGTGGGAAGCCTCGTC CCCCCGAGTTTGCTGTGTCATGATGAGAGATTGGGGCACGAGAACATTAG GAAGAAAAGGTATACAATACCAATGCTCATTCATTGTTGTTTCAATCAAA ATCAATCTGTTATCTCTGTTTTCACCTTCAGGAACGGCAAGCTTTTAATT TTACTTTTATTATTGTACTGTGTACTGTGTGGTGTGTGGTTCTGTAAATT CTGTTCTGTCTAG
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Coding sequence (CDS) from alignment at Chr_11-CM003613.1:48504522..48505784-

>rna-KK1_004599_Cc_Asha_v1.0 ID=rna-KK1_004599_Cc_Asha_v1.0; Name=rna-KK1_004599; organism=Cajanus cajan; type=CDS; length=2526bp; location=Sequence derived from: Chr_11-CM003613.1:48504522..48505784- (Cajanus cajan
ATGGCAAATCTTCCGGTGGAAGTAATCACCGAAATCCTCTCCCGTCTGCC
GGTGAAGTCGCTCCTCCGGTGCCGCTCCACCTGCAAGTGCTGGCGCTCGC
TAATCGACACCACGCACTTCATCCTCTTCCATCTCACCAAGTCCCACACC
GCGCTCATTATCCGCCACCGCTCGCACCTCTATTCTCTCGACCCCCAAAC
CCTAAACTGCCACCACAAGCCTCTGGAATTGACGCACCCTCTCATGTGCT
ACAGCAACAGCATCAAGGTCCTCGGCTCCTGCAATGGTCTCCTCTGCATC
TCCAACGTCGCCGACGACATCGCCCTCTGGAACCCCTCCCTCCGCCGCCA
CCGCATCCTCCCCGCCGACCGCTTCCACCGCCCGGAGTCCTCCCTCTTCG
CCGCCCGCGTCTACGGCTTCGGCTTCGACGCCCTCTCCAACGACTACAAG
CTCGTCAGCATCACCTACTTCGTCGACCTCCACAACCGCACCTTCGATTC
CCAGGTCCAGCTCTATACCCTAAAATCCGACGCCTGGAGAAACCTCCCCA
ACATGCCCTACGCGCTCTGCTGCGCGCGTACCATGGGCGTCTTCGTTTCC
TCCTCCCTCCACTGGGTCGTCACGCGCAAACTCGAGCCCGACCAGCCCGA
TTTAGTCGTCGCGTTTGACCTCACGCGCGAGCGCTTCCGTGAAGTCCCGC
TTCCGGTTACTGTCACCGGGAATTTCGACATGGAGGTTGCTCTTCTCGGA
GGGTGTCTCTCCGTGGTGGAGAACAGGGGAAACGCGTTTGACGTGTGGGT
TATGAGGCAGTACGGATTGCGTGACACGTGGGTCAAGCTCTTTACTCTCT
CTGACAACGTTCACACGGGATCGGTCAAATTCAAATCTGTGAGGCCCTTG
GCTTTTGATCACGAGAGGGATAGGGTTTTGTTTGAGCAGAACCGTAGCAA
GCTGTGTTGGTATGATCTTGGAAGTGGTGAAGTGGGGTACGTGCAAATAA
CAGGGATGGGAAACTCGATTGAAGGCACGGTTTGCGTGGGAAGCCTCGTC
CCCCCGAGTTTGCTGTGTCATGATGAGAGATTGGGGCACGAGAACATTAG
GAAGAAAAGGTATACAATACCAATGCTCATTCATTGTTGTTTCAATCAAA
ATCAATCTGTTATCTCTGTTTTCACCTTCAGGAACGGCAAGCTTTTAATT
TTACTTTTATTATTGTACTGTGTACTGTGTGGTGTGTGGTTCTGTAAATT
CTGTTCTGTCTAGATGGCAAATCTTCCGGTGGAAGTAATCACCGAAATCC
TCTCCCGTCTGCCGGTGAAGTCGCTCCTCCGGTGCCGCTCCACCTGCAAG
TGCTGGCGCTCGCTAATCGACACCACGCACTTCATCCTCTTCCATCTCAC
CAAGTCCCACACCGCGCTCATTATCCGCCACCGCTCGCACCTCTATTCTC
TCGACCCCCAAACCCTAAACTGCCACCACAAGCCTCTGGAATTGACGCAC
CCTCTCATGTGCTACAGCAACAGCATCAAGGTCCTCGGCTCCTGCAATGG
TCTCCTCTGCATCTCCAACGTCGCCGACGACATCGCCCTCTGGAACCCCT
CCCTCCGCCGCCACCGCATCCTCCCCGCCGACCGCTTCCACCGCCCGGAG
TCCTCCCTCTTCGCCGCCCGCGTCTACGGCTTCGGCTTCGACGCCCTCTC
CAACGACTACAAGCTCGTCAGCATCACCTACTTCGTCGACCTCCACAACC
GCACCTTCGATTCCCAGGTCCAGCTCTATACCCTAAAATCCGACGCCTGG
AGAAACCTCCCCAACATGCCCTACGCGCTCTGCTGCGCGCGTACCATGGG
CGTCTTCGTTTCCTCCTCCCTCCACTGGGTCGTCACGCGCAAACTCGAGC
CCGACCAGCCCGATTTAGTCGTCGCGTTTGACCTCACGCGCGAGCGCTTC
CGTGAAGTCCCGCTTCCGGTTACTGTCACCGGGAATTTCGACATGGAGGT
TGCTCTTCTCGGAGGGTGTCTCTCCGTGGTGGAGAACAGGGGAAACGCGT
TTGACGTGTGGGTTATGAGGCAGTACGGATTGCGTGACACGTGGGTCAAG
CTCTTTACTCTCTCTGACAACGTTCACACGGGATCGGTCAAATTCAAATC
TGTGAGGCCCTTGGCTTTTGATCACGAGAGGGATAGGGTTTTGTTTGAGC
AGAACCGTAGCAAGCTGTGTTGGTATGATCTTGGAAGTGGTGAAGTGGGG
TACGTGCAAATAACAGGGATGGGAAACTCGATTGAAGGCACGGTTTGCGT
GGGAAGCCTCGTCCCCCCGAGTTTGCTGTGTCATGATGAGAGATTGGGGC
ACGAGAACATTAGGAAGAAAAGGTATACAATACCAATGCTCATTCATTGT
TGTTTCAATCAAAATCAATCTGTTATCTCTGTTTTCACCTTCAGGAACGG
CAAGCTTTTAATTTTACTTTTATTATTGTACTGTGTACTGTGTGGTGTGT
GGTTCTGTAAATTCTGTTCTGTCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR001810F-box_dom
IPR017451F-box-assoc_interact_dom
IPR006527F-box-assoc_dom_typ1
IPR011043Gal_Oxase/kelch_b-propeller
IPR036047F-box-like_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding