rna-KK1_003197

Transcript Overview
Namerna-KK1_003197
Unique Namerna-KK1_003197_Cc_Asha_v1.0
TypemRNA
OrganismCajanus cajan (pigeon pea)
Sequence length1917
ProductBEL1-like homeodomain protein 1
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_11-CM003613.1supercontigChr_11-CM003613.1:34536115..34539364 +Cajanus cajan Asha genome v1.0n/a
Chr_11-CM003613.1supercontigChr_11-CM003613.1:34536115..34539364 +Cajanus cajan Asha genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Cajanus cajan Asha genome v1.02019-09-17
BLAST: C. cajan Asha genome v1.0 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
cccrR0370Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ccpsR328Pisum sativum Cameor genome v1aPisum sativum
caiccL0246Cicer arietinum ICC 4958 genome v2Cicer arietinum
ccpvR0473Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccpvR0582Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccpvR0594Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccvuR0474Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccvuR0570Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccvuR0578Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caccL0280Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caccL0435Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
anccL0737Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccL1143Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccL1408Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asccL0560Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cctifR0437Vicia faba cv. Tiffany genome v1.0Vicia faba
cctifR0491Vicia faba cv. Tiffany genome v1.0Vicia faba
ccvfhR0449Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccvfhR0503Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccvrvR0431Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccvrvR0510Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccvuaR0420Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
ccvuaR0514Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
ccvssR0511Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccvssR0582Vicia sativa cv. Studenica genome v1.0Vicia sativa
canccL0270Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canccL0426Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjccL0586Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjccL0729Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjccL1070Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carccL0286Cicer arietinum
carccL0453Cicer arietinum
ccccaR0522Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccccaR0576Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccccaR0592Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccvumR0518Vigna umbellata FF25 genome v1.0Vigna umbellata
ccvumR0597Vigna umbellata FF25 genome v1.0Vigna umbellata
ccvumR0624Vigna umbellata FF25 genome v1.0Vigna umbellata

Orthologs
Gene/TranscriptAssemblySpecies
Cr_05452.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Vigun01g180200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Phvul.007G267900.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
evm.model.Chr01.1722Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
rna-XM_014640421.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vfaba.Hedin2.R1.5g154240.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-XM_027334116.1Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Ca_00859Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vfaba.Hedin2.R1.3g037240.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vigun05g231800.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Va05G047060.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vfaba.Tiffany.R1.5g123360.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vum_08G02625.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Ca_07906.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
rna-TanjilR_23675Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-XM_004494194.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Va02G003610.3Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vum_07G00628.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Phvul.001G195800.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Psat3g028480.2Pisum sativum Cameor genome v1aPisum sativum
Vum_04G02590.1Vigna umbellata FF25 genome v1.0Vigna umbellata
rna-TanjilR_19642Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
evm.model.Chr07.1710.1.62113179Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vigun07g014500.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
jg31625.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
LR48_mrnaVigan02g013300Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Phvul.005G119300.5Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Va03G076270.2Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-TanjilR_00298Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-XM_014658345.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vfaba.Tiffany.R1.3g029280.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Ca_14437Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
jg815.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Cc_v2.0_03108.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Cc_v2.0_07975.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Cc_v2.0_23800.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-KK1_003197gene-KK1_003197_Cc_Asha_v1.0Cajanus cajangene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-KK1_003197rna-KK1_003197_Cc_Asha_v1.0-proteinCajanus cajanpolypeptide
rna-KK1_003197_Cc_Asha_v1.0rna-KK1_003197_Cc_Asha_v1.0Cajanus cajanpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-KK1_003197_Cc_Asha_v1.0-exon-Chr_11-CM003613.1_Cc_Asha_v1.0-1571082112:34536115..34536885rna-KK1_003197_Cc_Asha_v1.0-exon-Chr_11-CM003613.1_Cc_Asha_v1.0-1571082112:34536115..34536885Cajanus cajanexon
rna-KK1_003197_Cc_Asha_v1.0-exon-Chr_11-CM003613.1_Cc_Asha_v1.0-1571847872:34536115..34536885rna-KK1_003197_Cc_Asha_v1.0-exon-Chr_11-CM003613.1_Cc_Asha_v1.0-1571847872:34536115..34536885Cajanus cajanexon
rna-KK1_003197_Cc_Asha_v1.0-exon-Chr_11-CM003613.1_Cc_Asha_v1.0-1571082112:34537457..34537830rna-KK1_003197_Cc_Asha_v1.0-exon-Chr_11-CM003613.1_Cc_Asha_v1.0-1571082112:34537457..34537830Cajanus cajanexon
rna-KK1_003197_Cc_Asha_v1.0-exon-Chr_11-CM003613.1_Cc_Asha_v1.0-1571847872:34537457..34537830rna-KK1_003197_Cc_Asha_v1.0-exon-Chr_11-CM003613.1_Cc_Asha_v1.0-1571847872:34537457..34537830Cajanus cajanexon
rna-KK1_003197_Cc_Asha_v1.0-exon-Chr_11-CM003613.1_Cc_Asha_v1.0-1571082112:34538408..34538468rna-KK1_003197_Cc_Asha_v1.0-exon-Chr_11-CM003613.1_Cc_Asha_v1.0-1571082112:34538408..34538468Cajanus cajanexon
rna-KK1_003197_Cc_Asha_v1.0-exon-Chr_11-CM003613.1_Cc_Asha_v1.0-1571847872:34538408..34538468rna-KK1_003197_Cc_Asha_v1.0-exon-Chr_11-CM003613.1_Cc_Asha_v1.0-1571847872:34538408..34538468Cajanus cajanexon
rna-KK1_003197_Cc_Asha_v1.0-exon-Chr_11-CM003613.1_Cc_Asha_v1.0-1571082112:34538543..34538675rna-KK1_003197_Cc_Asha_v1.0-exon-Chr_11-CM003613.1_Cc_Asha_v1.0-1571082112:34538543..34538675Cajanus cajanexon
rna-KK1_003197_Cc_Asha_v1.0-exon-Chr_11-CM003613.1_Cc_Asha_v1.0-1571847872:34538543..34538675rna-KK1_003197_Cc_Asha_v1.0-exon-Chr_11-CM003613.1_Cc_Asha_v1.0-1571847872:34538543..34538675Cajanus cajanexon
rna-KK1_003197_Cc_Asha_v1.0-exon-Chr_11-CM003613.1_Cc_Asha_v1.0-1571082112:34538787..34539364rna-KK1_003197_Cc_Asha_v1.0-exon-Chr_11-CM003613.1_Cc_Asha_v1.0-1571082112:34538787..34539364Cajanus cajanexon
rna-KK1_003197_Cc_Asha_v1.0-exon-Chr_11-CM003613.1_Cc_Asha_v1.0-1571847872:34538787..34539364rna-KK1_003197_Cc_Asha_v1.0-exon-Chr_11-CM003613.1_Cc_Asha_v1.0-1571847872:34538787..34539364Cajanus cajanexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-KK1_003197_Cc_Asha_v1.0-CDS-Chr_11-CM003613.1_Cc_Asha_v1.0-1571082112:34536115..34536885rna-KK1_003197_Cc_Asha_v1.0-CDS-Chr_11-CM003613.1_Cc_Asha_v1.0-1571082112:34536115..34536885Cajanus cajanCDS
rna-KK1_003197_Cc_Asha_v1.0-CDS-Chr_11-CM003613.1_Cc_Asha_v1.0-1571847872:34536115..34536885rna-KK1_003197_Cc_Asha_v1.0-CDS-Chr_11-CM003613.1_Cc_Asha_v1.0-1571847872:34536115..34536885Cajanus cajanCDS
rna-KK1_003197_Cc_Asha_v1.0-CDS-Chr_11-CM003613.1_Cc_Asha_v1.0-1571082112:34537457..34537830rna-KK1_003197_Cc_Asha_v1.0-CDS-Chr_11-CM003613.1_Cc_Asha_v1.0-1571082112:34537457..34537830Cajanus cajanCDS
rna-KK1_003197_Cc_Asha_v1.0-CDS-Chr_11-CM003613.1_Cc_Asha_v1.0-1571847872:34537457..34537830rna-KK1_003197_Cc_Asha_v1.0-CDS-Chr_11-CM003613.1_Cc_Asha_v1.0-1571847872:34537457..34537830Cajanus cajanCDS
rna-KK1_003197_Cc_Asha_v1.0-CDS-Chr_11-CM003613.1_Cc_Asha_v1.0-1571082112:34538408..34538468rna-KK1_003197_Cc_Asha_v1.0-CDS-Chr_11-CM003613.1_Cc_Asha_v1.0-1571082112:34538408..34538468Cajanus cajanCDS
rna-KK1_003197_Cc_Asha_v1.0-CDS-Chr_11-CM003613.1_Cc_Asha_v1.0-1571847872:34538408..34538468rna-KK1_003197_Cc_Asha_v1.0-CDS-Chr_11-CM003613.1_Cc_Asha_v1.0-1571847872:34538408..34538468Cajanus cajanCDS
rna-KK1_003197_Cc_Asha_v1.0-CDS-Chr_11-CM003613.1_Cc_Asha_v1.0-1571082112:34538543..34538675rna-KK1_003197_Cc_Asha_v1.0-CDS-Chr_11-CM003613.1_Cc_Asha_v1.0-1571082112:34538543..34538675Cajanus cajanCDS
rna-KK1_003197_Cc_Asha_v1.0-CDS-Chr_11-CM003613.1_Cc_Asha_v1.0-1571847872:34538543..34538675rna-KK1_003197_Cc_Asha_v1.0-CDS-Chr_11-CM003613.1_Cc_Asha_v1.0-1571847872:34538543..34538675Cajanus cajanCDS
rna-KK1_003197_Cc_Asha_v1.0-CDS-Chr_11-CM003613.1_Cc_Asha_v1.0-1571082112:34538787..34539364rna-KK1_003197_Cc_Asha_v1.0-CDS-Chr_11-CM003613.1_Cc_Asha_v1.0-1571082112:34538787..34539364Cajanus cajanCDS
rna-KK1_003197_Cc_Asha_v1.0-CDS-Chr_11-CM003613.1_Cc_Asha_v1.0-1571847872:34538787..34539364rna-KK1_003197_Cc_Asha_v1.0-CDS-Chr_11-CM003613.1_Cc_Asha_v1.0-1571847872:34538787..34539364Cajanus cajanCDS


Homology
BLAST of rna-KK1_003197 vs. DB:Swiss
Match: BLH1_ARATH (BEL1-like homeodomain protein 1 OS=Arabidopsis thaliana OX=3702 GN=BLH1 PE=1 SV=1)

HSP 1 Score: 467.233 bits (1201), Expect = 9.924e-156
Identity = 358/713 (50.21%), Postives = 444/713 (62.27%), Query Frame = 1
Query:    1 MATYFHGNS-EIQSSAADGLQTLVLMNPG-YIHYSDTPSQPQPSHAAGNLVFLNPAAVAGNNNNSF---SPHAP-PSQTQQFVGIPLPASQDLNNHSMHAHHDVSPMHGFMPRMQYNHWNA--LDPA--SAARDTSRAQQGLSLGLG--------------PFREGQAPAMSGDDLRVXXXXXXXXXXVTNNGASGIQSVLLSSKYLKAAHELLEEVVNVN---IGIGSEL--------GKKTKVMXXXXXXXXXXXXXXXXXXXKRSSELSTAERQEIQMKKAKLIGMLDEVEQRYRQYHQQMEIVVSSFEQAAGIGSARTYTALALQTISKQFRCLKDAIAGQVRAANKSLGEDDCFG--GKIEGSRLKYVDHHXXXXXXXXXXGMIQH---NAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKPXXXXXXXXXXXXXXQN----------GXXXXXXXXXXXXXXRPPTSPIGGNVR-NQSGFSFMGSSELEGIA--QGSPKKAR-NHEMMHSPNSVPSINMDVKPNEGSNEQLSMKFGDERQG---RNGSSFMGNQTNFIGGFGQYPIGDIGRFD--AEQFTPTPRFTG--NGVSLTLGL---DSLPGT-HQTFLPNQN-IQLGRSLDIGEPHEFG--AIN--------TSSPHSTAAYESISMQNPKRFAAQLLPDFV 1911
            MA YFHGN  EI + +  GLQTL+LMNP  Y+ Y+   +    ++ + N    N      NNN+SF     HAP P+ +QQFVGIPL   +     S+ A  ++S +HG+ PR+QY+ + +  +DP    AA +T RAQQGLSL L               P   G      G+D+RV  GS       T +G +   + L+SSKYLKAA ELL+EVVN +   +   S+L        G    V   S+ AG        +  GKR  EL TAERQEIQMKKAKL  ML EVEQRYRQYHQQM++V+SSFEQAAGIGSA++YT+LAL+TIS+QFRCLK+AIAGQ++AANKSLGE+D     G+ EGSRLK+VDHHLRQQRALQQLGMIQH   NAWRPQRGLPER+VSVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMY+EEMKE  +N           S + S+  +  +  + P +    ++  N +G       +LEG+   QGSPK+ R + E M  P     IN D      SNE+L+MK  +ERQG     G  FMGN       FGQY + ++ RFD  ++Q     R++G  NGVSLTLGL   DSL  T HQ F+   + I +GR + IGE  E+G   IN         SS  + AAY  +++QN KR+ AQLLPDFV
Sbjct:    1 MAAYFHGNPPEISAGSDGGLQTLILMNPTTYVQYTQQDNDSNNNNNSNNSNNNNTNTNTNNNNSSFVFLDSHAPQPNASQQFVGIPLSGHEAA---SITAADNISVLHGYPPRVQYSLYGSHQVDPTHQQAACETPRAQQGLSLTLSSQQQQQQQHHQQHQPIHVGFGSG-HGEDIRVGSGS-------TGSGVTNGIANLVSSKYLKAAQELLDEVVNADSDDMNAKSQLFSSKKGSCGNDKPVGESSAGAGGEGSGGGAEAAGKRPVELGTAERQEIQMKKAKLSNMLHEVEQRYRQYHQQMQMVISSFEQAAGIGSAKSYTSLALKTISRQFRCLKEAIAGQIKAANKSLGEEDSVSGVGRFEGSRLKFVDHHLRQQRALQQLGMIQHPSNNAWRPQRGLPERAVSVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYMEEMKEQAKNMGSMEKTPLDQSNEDSASKSTSNQEKSPMADTNYHMNPNHNG-------DLEGVTGMQGSPKRLRTSDETMMQP-----INADFS----SNEKLTMKILEERQGIRSDGGYPFMGN-------FGQYQMDEMSRFDVVSDQELMAQRYSGNNNGVSLTLGLPHCDSLSSTHHQGFMQTHHGIPIGRRVKIGETEEYGPATINGGSSTTTAHSSAAAAAAYNGMNIQNQKRYVAQLLPDFV 679          
BLAST of rna-KK1_003197 vs. DB:Swiss
Match: BLH7_ARATH (BEL1-like homeodomain protein 7 OS=Arabidopsis thaliana OX=3702 GN=BLH7 PE=1 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 3.879e-78
Identity = 144/250 (57.60%), Postives = 178/250 (71.20%), Query Frame = 1
Query:  508 ASGIQSVLLSSKYLKAAHELLEEVVNVNIGIGSELGKKTKVMXXXXXXXXXXXXXXXXXXXKRSSELSTAERQEIQMKKAKLIGMLDEVEQRYRQYHQQMEIVVSSFEQAAGIGSARTYTALALQTISKQFRCLKDAIAGQVRAANKSLG-EDDCFGGKIEG-SRLKYVDHHXXXXXXXXXXGMIQHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKP 1251
             SG    + +SKYLKAA ELL+E VNV            K + +    G     V        ++E+  AERQE+Q K +KL+ +LDEV++ Y+QY+ QM+IVVSSF+  AG G+A+ YTALALQTIS+ FRCL+DAI+GQ+    KSLG E D   G+  G SRL+ VD  +RQQRALQ+LG++Q + WRPQRGLP+ SV VLRAWLFEHFLHPYPKDSDK MLA+QTGL+R QVSNWFINARVRLWKP
Sbjct:  108 VSGFTRTIHNSKYLKAAQELLDETVNVK-----------KALKQFQPEGDKINEVKEKNLQTNTAEIPQAERQELQSKLSKLLSILDEVDRNYKQYYHQMQIVVSSFDVIAGCGAAKPYTALALQTISRHFRCLRDAISGQILVIRKSLGGEQDGSDGRGVGISRLRNVDQQVRQQRALQRLGVMQPHTWRPQRGLPDSSVLVLRAWLFEHFLHPYPKDSDKIMLARQTGLSRGQVSNWFINARVRLWKP 346          
BLAST of rna-KK1_003197 vs. DB:Swiss
Match: BLH6_ARATH (BEL1-like homeodomain protein 6 OS=Arabidopsis thaliana OX=3702 GN=BLH6 PE=1 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 8.581e-77
Identity = 142/242 (58.68%), Postives = 172/242 (71.07%), Query Frame = 1
Query:  535 SSKYLKAAHELLEEVVNVNIGIGSELGKKTKVMXXXXXXXXXXXXXXXXXXXKRSSELSTAERQEIQMKKAKLIGMLDEVEQRYRQYHQQMEIVVSSFEQAAGIGSARTYTALALQTISKQFRCLKDAIAGQVRAANKSLGED-DCFGGKIEG--SRLKYVDHHXXXXXXXXXXGMIQHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKP 1251
            +SKYLKAA +LL+E VNV   +     +  K    ++           D +    +++S +ERQE+Q K  KL+ MLDEV++RY+QY+QQM+IVVSSF+  AG G+A+ YTALALQTIS+ FR L+DAI+GQ+    K LGE  D   GK  G  SRLKYVD HLRQQR     G +Q  AWRPQRGLPE SV +LRAWLFEHFLHPYPKDSDK MLA+QTGL+R QVSNWFINARVRLWKP
Sbjct:  143 NSKYLKAAQQLLDEAVNVKKALKQFQAEGDK----NNENPQEPNQSTQDSSTNPPADISQSERQEMQSKLTKLLSMLDEVDRRYKQYYQQMQIVVSSFDVIAGYGAAKPYTALALQTISRHFRSLRDAISGQILVLRKCLGEQQDGSDGKRVGIISRLKYVDQHLRQQR-----GFMQPQAWRPQRGLPENSVLILRAWLFEHFLHPYPKDSDKIMLARQTGLSRGQVSNWFINARVRLWKP 375          
BLAST of rna-KK1_003197 vs. DB:Swiss
Match: BLH3_ARATH (BEL1-like homeodomain protein 3 OS=Arabidopsis thaliana OX=3702 GN=BLH3 PE=1 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 5.011e-71
Identity = 138/252 (54.76%), Postives = 180/252 (71.43%), Query Frame = 1
Query:  508 ASGIQSVLLSSKYLKAAHELLEEVVNVNIGIGSELGKKTKVMXXXXXXXXXXXXXXXXXXXKRSSELSTAERQEIQMKKAKLIGMLDEVEQRYRQYHQQMEIVVSSFEQAAGIGSARTYTALALQTISKQFRCLKDAIAGQVRAANKSLGE---DDCFGGKIEGSRLKYVDHHXXXXXXX-XXXGMIQHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKP 1251
             SG  S +L S+YLK   +LL+EVV+V   +  +LG K     +     +G      + +  +S ELS +ERQE+Q KK+KL+ M+DEV++RY QYH QME + SSFE   G+G+A+ YT++AL  IS+ FRCL+DAI  Q++     LGE    D  G +I   RL+Y+D  LRQQRAL QQLGM++  AWRPQRGLPE SVS+LRAWLFEHFLHPYPK+S+K ML+KQTGL+++QV+NWFINARVRLWKP
Sbjct:  161 TSGFVSSVLRSRYLKPTQQLLDEVVSVRKDL--KLGNKKMKNDKGQDFHNGSSDNITEDDKSQSQELSPSERQELQSKKSKLLTMVDEVDKRYNQYHHQMEALASSFEMVTGLGAAKPYTSVALNRISRHFRCLRDAIKEQIQVIRGKLGERETSDEQGERI--PRLRYLDQRLRQQRALHQQLGMVR-PAWRPQRGLPENSVSILRAWLFEHFLHPYPKESEKIMLSKQTGLSKNQVANWFINARVRLWKP 407          
BLAST of rna-KK1_003197 vs. DB:Swiss
Match: BLH10_ARATH (BEL1-like homeodomain protein 10 OS=Arabidopsis thaliana OX=3702 GN=BLH10 PE=1 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 4.691e-70
Identity = 140/259 (54.05%), Postives = 176/259 (67.95%), Query Frame = 1
Query:  499 NNGASGIQSVLLSSKYLKAAHELLEEVVNVNIGIGSELGKKTKV--MXXXXXXXXXXXXXXXXXXXKRSSELSTAERQEIQMKKAKLIGMLDEVEQRYRQYHQQMEIVVSSFEQAAGIGSARTYTALALQTISKQFRCLKDAIAGQVRAANKSLGE------DDCFGGKIEGSRLKYVDHHXXXXXXXXXXGMIQHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKP 1251
            N  + G  S +L S+YLK A  LL+EVV+V   +     KK KV      S    G G      +  +S ELST ER+E+Q KK KL+ M+DEV++RY QY+ QME + SSFE  AG+GSA+ YT++AL  IS+ FR L+DAI  Q++   + LGE      D+  G +I   RL+Y+D  LRQQRAL Q   +   AWRPQRGLPE SVSVLRAWLFEHFLHPYPK+S+K MLAKQTGL+++QV+NWFINARVRLWKP
Sbjct:  156 NETSGGFMSSVLRSRYLKPAQNLLDEVVSVKKELNQMGKKKMKVNDFNSGSKEIEGGGGELSSDSNGKSIELSTIEREELQNKKNKLLTMVDEVDKRYNQYYHQMEALASSFEIVAGLGSAKPYTSVALNRISRHFRALRDAIKEQIQIVREKLGEKGGESLDEQQGERI--PRLRYLDQRLRQQRALHQQLGMVRPAWRPQRGLPENSVSVLRAWLFEHFLHPYPKESEKIMLAKQTGLSKNQVANWFINARVRLWKP 412          
BLAST of rna-KK1_003197 vs. DB:Swiss
Match: BLH5_ARATH (BEL1-like homeodomain protein 5 OS=Arabidopsis thaliana OX=3702 GN=BLH5 PE=1 SV=2)

HSP 1 Score: 233.802 bits (595), Expect = 6.348e-69
Identity = 129/240 (53.75%), Postives = 163/240 (67.92%), Query Frame = 1
Query:  532 LSSKYLKAAHELLEEVVNVNIGIGSELGKKTKVMXXXXXXXXXXXXXXXXXXXKRSSELSTAERQEIQMKKAKLIGMLDEVEQRYRQYHQQMEIVVSSFEQAAGIGSARTYTALALQTISKQFRCLKDAIAGQVRAANKSLGEDDCFGGKIEGSRLKYVDHHXXXXXXXXXXGMIQHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKP 1251
            L+  YLKAA ELL E+VNV  G GS   K+ + + + S     +    G   G  +          +QMKKAKLI M + VEQRY+QYH QM+ ++SSFEQAAG+GSA +YT +ALQTISKQFR +KD I+ Q++  NK LG+ + F  +++  +L  + HH               NAWRPQRGLPE++VSVLR+WLFEHFLHPYP+D DK MLAKQTGLT+SQVSNWFINARVR+WKP
Sbjct:   78 LAPIYLKAAQELLNEIVNV--GNGSHGAKQERPVSKESTIYGVEDINGGYKPGVAA----------LQMKKAKLISMGEMVEQRYKQYHDQMQTIISSFEQAAGLGSANSYTHMALQTISKQFRAVKDMISLQIKQINKLLGQKE-FDEQLK--KLGKMAHHHS-------------NAWRPQRGLPEKAVSVLRSWLFEHFLHPYPRDLDKVMLAKQTGLTKSQVSNWFINARVRMWKP 289          
BLAST of rna-KK1_003197 vs. DB:Swiss
Match: BLH2_ARATH (BEL1-like homeodomain protein 2 OS=Arabidopsis thaliana OX=3702 GN=BLH2 PE=1 SV=3)

HSP 1 Score: 232.261 bits (591), Expect = 1.847e-65
Identity = 127/251 (50.60%), Postives = 172/251 (68.53%), Query Frame = 1
Query:  523 SVLLSSKYLKAAHELLEEVVNVNIGI--GSELGKKTKVMXXXXXXXXXXXXXXXXXXXKRSSELSTAERQEIQMKKAKLIGMLDEVEQRYRQYHQQMEIVVSSFEQAAGIGSARTYTALALQTISKQFRCLKDAIAGQVRAANKSLGEDDCFG------GKIEGSRLKYVDHHXXXXXXXXXXGMIQHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKP 1251
            ++L +S+Y  AA ELLEE  +V  G    ++LG  +     +     G  S +  G  K    LS ++R E Q +K KL+ ML+EV++RY  Y +QM++VV+SF+   G G+A  YTALA + +S+ FRCLKDA+A Q++ + + LG+ D  G       K E  RL+ ++  LRQ RA  Q+GM++  AWRPQRGLPERSV++LRAWLFEHFLHPYP D+DKH+LA+QTGL+R+QVSNWFINARVRLWKP
Sbjct:  311 NILRNSRYTTAAQELLEEFCSVGRGFLKKNKLGNSSN--PNTCGGDGGGSSPSSAGANKEHPPLSASDRIEHQRRKVKLLTMLEEVDRRYNHYCEQMQMVVNSFDIVMGHGAALPYTALAQKAMSRHFRCLKDAVAAQLKQSCELLGDKDAAGISSSGLTKGETPRLRLLEQSLRQNRAFHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKP 559          
BLAST of rna-KK1_003197 vs. DB:Swiss
Match: BLH4_ARATH (BEL1-like homeodomain protein 4 OS=Arabidopsis thaliana OX=3702 GN=BLH4 PE=1 SV=2)

HSP 1 Score: 224.557 bits (571), Expect = 1.738e-63
Identity = 131/253 (51.78%), Postives = 172/253 (67.98%), Query Frame = 1
Query:  526 VLLSSKYLKAAHELLEEVVNVNIGIGSELGKKTKVMXXXX-----XXXXXXXXXXXXXXXKRSSELSTAERQEIQMKKAKLIGMLDEVEQRYRQYHQQMEIVVSSFEQAAGIGSARTYTALALQTISKQFRCLKDAIAGQVRAANKSLGEDDCFGG------KIEGSRLKYVDHHXXXXXXXXXXGMIQHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKP 1251
             L +SKY K A ELLEE  +V  G      KK K+   +S       G G GS +  G    S  LS A+R E Q +K KL+ ML+EV++RY  Y +QM++VV+SF+Q  G G+A  YT LA + +S+ FRCLKDA+A Q++ + + LG+ +  G       K E  RL+ ++  LRQQRA   +GM++  AWRPQRGLPERSV++LRAWLFEHFL+PYP D+DKH+LA+QTGL+R+QVSNWFINARVRLWKP
Sbjct:  237 TLRNSKYTKPAQELLEEFCSVGRG----HFKKNKLSRNNSNPNTTGGGGGGGSSSSAGTANDSPPLSPADRIEHQRRKVKLLSMLEEVDRRYNHYCEQMQMVVNSFDQVMGYGAAVPYTTLAQKAMSRHFRCLKDAVAVQLKRSCELLGDKEAAGAASSGLTKGETPRLRLLEQSLRQQRAFHHMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLNPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKP 485          
BLAST of rna-KK1_003197 vs. DB:Swiss
Match: BEL1_ARATH (Homeobox protein BEL1 homolog OS=Arabidopsis thaliana OX=3702 GN=BEL1 PE=1 SV=2)

HSP 1 Score: 207.608 bits (527), Expect = 2.290e-57
Identity = 115/257 (44.75%), Postives = 161/257 (62.65%), Query Frame = 1
Query:  535 SSKYLKAAHELLEEVVNVNIGIGSE------------LGKKTKVMXXXXXXXXXXXXXXXXXXXKRSSELSTAERQEIQMKKAKLIGMLDEVEQRYRQYHQQMEIVVSSFEQAAGIGSARTYTALALQTISKQFRCLKDAIAGQVRAANKSLGEDD------CFGGKIEGSRLKYVDHHXXXXXXXXXXGMIQHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKP 1251
            SSKYL  A ELL E  ++ +    E              ++ +      +        A   + K    L + E  E+Q +KAKL+ ML+E+++RY  Y +QM +  ++FE A G+G A  YTALA + +S+ FRCLKD + GQ++A +++LGE +          + E  RL+ +D  LRQQ++ +Q+ ++  + WRPQRGLPER+V+ LRAWLFEHFLHPYP D DKH+LA+QTGL+RSQVSNWFINARVRLWKP
Sbjct:  196 SSKYLSPAQELLSEFCSLGVKESDEEVMMMKHKKKQKGKQQEEWDTSHHSNNDQHDQSATTSSKKHVPPLHSLEFMELQKRKAKLLSMLEELKRRYGHYREQMRVAAAAFEAAVGLGGAEIYTALASRAMSRHFRCLKDGLVGQIQATSQALGEREEDNRAVSIAARGETPRLRLLDQALRQQKSYRQMTLVDAHPWRPQRGLPERAVTTLRAWLFEHFLHPYPSDVDKHILARQTGLSRSQVSNWFINARVRLWKP 452          
BLAST of rna-KK1_003197 vs. DB:Swiss
Match: BLH9_ARATH (BEL1-like homeodomain protein 9 OS=Arabidopsis thaliana OX=3702 GN=BLH9 PE=1 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 1.243e-52
Identity = 117/256 (45.70%), Postives = 159/256 (62.11%), Query Frame = 1
Query:  511 SGIQSVLLSSKYLKAAHELLEEVVNVNIGIGSELGKKTKVMXXXXXXXXXXXXXXXXXXXKRSSELSTAERQEIQMKKAKLIGMLDEVEQRYRQYHQQMEIVVSSFEQAAGIGSARTYTALALQTISKQFRCLKDAIAGQVRAA--NKSLGEDDC-----FGGKIEGSRLKYVDHHXXXXXXXXXXGMIQHNA--WRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKP 1251
            +G  S+L  S++LK A  LL+E  NV  GI ++     KV+ +  ++   D +V      +    +S     +   KK+KLI MLDEV +RY+QY++Q++ V+ SFE  AG+G A  Y  LAL+ +SK F+CLK+AI  Q++ +  NK   +  C        K +  R    D       A Q+ G   H+A  WRP RGLPER+V+VLRAWLF+HFLHPYP D+DK MLAKQTGL+R+QVSNWFINARVR+WKP
Sbjct:  165 TGYASILKGSRFLKPAQMLLDEFCNVGRGIYTD-----KVIDDDDSSLLFDPTV------ENLCGVSDGGGGDNGKKKSKLISMLDEVYKRYKQYYEQLQAVMGSFECVAGLGHAAPYANLALKALSKHFKCLKNAITDQLQFSHNNKIQQQQQCGHPMNSENKTDSLRFGGSDSSRGLCSAGQRHGFPDHHAPVWRPHRGLPERAVTVLRAWLFDHFLHPYPTDTDKLMLAKQTGLSRNQVSNWFINARVRVWKP 409          
The following BLAST results are available for this feature:
BLAST of rna-KK1_003197 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: C. cajan Asha genome v1.0 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
BLH1_ARATH9.924e-15650.21BEL1-like homeodomain protein 1 OS=Arabidopsis tha... [more]
BLH7_ARATH3.879e-7857.60BEL1-like homeodomain protein 7 OS=Arabidopsis tha... [more]
BLH6_ARATH8.581e-7758.68BEL1-like homeodomain protein 6 OS=Arabidopsis tha... [more]
BLH3_ARATH5.011e-7154.76BEL1-like homeodomain protein 3 OS=Arabidopsis tha... [more]
BLH10_ARATH4.691e-7054.05BEL1-like homeodomain protein 10 OS=Arabidopsis th... [more]
BLH5_ARATH6.348e-6953.75BEL1-like homeodomain protein 5 OS=Arabidopsis tha... [more]
BLH2_ARATH1.847e-6550.60BEL1-like homeodomain protein 2 OS=Arabidopsis tha... [more]
BLH4_ARATH1.738e-6351.78BEL1-like homeodomain protein 4 OS=Arabidopsis tha... [more]
BEL1_ARATH2.290e-5744.75Homeobox protein BEL1 homolog OS=Arabidopsis thali... [more]
BLH9_ARATH1.243e-5245.70BEL1-like homeodomain protein 9 OS=Arabidopsis tha... [more]
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InterPro
Analysis Name: Cajanus cajan Asha genome v1.0
Date Performed: 2019-09-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 241..268
NoneNo IPR availableGENE3D1.10.10.60coord: 353..431
e-value: 1.1E-28
score: 100.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 121..168
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 211..239
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 428..501
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 445..469
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 428..444
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 154..168
IPR006563POX domainSMARTSM00574prehox3coord: 171..309
e-value: 1.3E-60
score: 217.4
IPR006563POX domainPFAMPF07526POXcoord: 176..308
e-value: 1.7E-47
score: 161.4
IPR001356Homeobox domainSMARTSM00389HOX_1coord: 357..421
e-value: 5.3E-9
score: 45.9
IPR001356Homeobox domainPROSITEPS50071HOMEOBOX_2coord: 354..417
score: 12.195
IPR001356Homeobox domainCDDcd00086homeodomaincoord: 357..418
e-value: 3.03068E-13
score: 62.646
IPR008422Homeobox KN domainPFAMPF05920Homeobox_KNcoord: 374..413
e-value: 5.8E-18
score: 64.5
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 358..424

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-KK1_003197_Cc_Asha_v1.0 ID=rna-KK1_003197_Cc_Asha_v1.0; Name=rna-KK1_003197; organism=Cajanus cajan; type=mRNA; length=1917bp
ATGGCGACATACTTTCATGGTAACTCCGAAATCCAATCAAGTGCCGCCGA
CGGACTCCAAACACTCGTCCTCATGAACCCCGGCTACATCCACTACTCCG
ACACGCCGTCGCAGCCGCAACCCTCACACGCCGCGGGAAACCTCGTGTTT
CTCAACCCCGCCGCCGTCGCCGGCAACAACAACAACTCCTTCAGCCCTCA
CGCGCCGCCCTCTCAGACCCAACAATTCGTTGGAATCCCTCTCCCCGCTT
CCCAAGACCTCAACAACCACTCCATGCACGCGCACCACGACGTCTCGCCC
ATGCATGGCTTCATGCCTCGCATGCAGTACAATCACTGGAACGCGCTTGA
CCCCGCCTCGGCGGCGCGTGATACGTCACGCGCGCAACAGGGGCTTTCCT
TGGGGCTGGGGCCGTTCCGGGAGGGTCAGGCGCCGGCCATGTCCGGCGAC
GACCTGCGCGTGTCCGGCGGGTCGCCGTCTTCGGCTTCTGGGGTTACCAA
CAACGGTGCTTCCGGCATTCAGAGTGTGCTTTTGAGCTCGAAGTACTTGA
AGGCAGCGCATGAGCTTCTAGAAGAGGTTGTGAATGTTAACATTGGGATT
GGCTCTGAGTTGGGAAAAAAGACCAAGGTGATGGGAGAATCATCCGCAGC
TGGTAGTGGAGATGGTTCAGTTGCTGGGGATGGAAATGGCAAGCGTAGTT
CTGAGTTATCAACTGCAGAAAGACAAGAAATTCAGATGAAGAAAGCTAAG
TTAATCGGCATGCTTGATGAGGTGGAGCAAAGGTACAGGCAGTACCACCA
ACAGATGGAGATTGTGGTGTCTTCGTTTGAGCAAGCTGCGGGGATTGGTT
CTGCGAGGACATACACTGCTCTTGCATTGCAAACAATCTCGAAGCAGTTT
CGGTGTTTGAAAGATGCGATTGCAGGGCAGGTTCGTGCTGCTAATAAGAG
CTTAGGAGAAGATGACTGCTTTGGAGGCAAAATAGAAGGTTCTAGGCTCA
AATATGTGGACCATCATCTTCGGCAACAGAGAGCTCTCCAACAATTGGGA
ATGATCCAGCACAACGCTTGGAGACCCCAGAGAGGATTGCCTGAAAGATC
CGTTTCTGTTCTTCGTGCTTGGCTCTTCGAACACTTCCTCCACCCATATC
CCAAGGATTCGGACAAGCACATGCTCGCAAAACAAACGGGGCTAACTAGG
AGCCAGGTTTCGAATTGGTTTATTAATGCTCGAGTTCGGCTTTGGAAGCC
AATGGTGGAGGAAATGTACTTGGAGGAGATGAAGGAGCATGAACAGAATG
GTTCTGAGGACAAATCAAGCAAGAGCAATGAAGATTCTGTTTCTAGACCA
CCGACATCCCCGATTGGTGGGAATGTGAGAAACCAATCAGGATTCAGCTT
CATGGGGTCATCAGAGCTAGAAGGGATCGCACAAGGAAGTCCCAAGAAAG
CAAGGAACCATGAGATGATGCATTCCCCAAATAGTGTCCCTTCAATTAAC
ATGGATGTGAAGCCCAATGAGGGAAGCAATGAGCAACTCTCAATGAAATT
TGGAGATGAAAGGCAAGGCAGAAACGGGTCCTCCTTCATGGGAAACCAAA
CAAACTTCATTGGTGGCTTTGGACAGTATCCAATTGGTGATATTGGAAGG
TTTGATGCAGAGCAGTTTACACCAACACCAAGGTTTACAGGTAATGGTGT
TTCCCTCACTCTTGGTCTTGACTCATTACCAGGAACACATCAAACGTTTC
TCCCAAACCAAAACATTCAACTAGGAAGAAGCTTGGACATTGGTGAACCA
CATGAGTTTGGTGCCATAAACACTTCCTCTCCTCACTCTACAGCTGCTTA
TGAGAGTATCAGCATGCAAAACCCAAAGAGGTTTGCTGCACAATTGTTGC
CAGACTTTGTTACCTAA
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protein sequence of rna-KK1_003197_Cc_Asha_v1.0

>rna-KK1_003197_Cc_Asha_v1.0 ID=rna-KK1_003197_Cc_Asha_v1.0; Name=rna-KK1_003197_Cc_Asha_v1.0; organism=Cajanus cajan; type=polypeptide; length=638bp
MATYFHGNSEIQSSAADGLQTLVLMNPGYIHYSDTPSQPQPSHAAGNLVF
LNPAAVAGNNNNSFSPHAPPSQTQQFVGIPLPASQDLNNHSMHAHHDVSP
MHGFMPRMQYNHWNALDPASAARDTSRAQQGLSLGLGPFREGQAPAMSGD
DLRVSGGSPSSASGVTNNGASGIQSVLLSSKYLKAAHELLEEVVNVNIGI
GSELGKKTKVMGESSAAGSGDGSVAGDGNGKRSSELSTAERQEIQMKKAK
LIGMLDEVEQRYRQYHQQMEIVVSSFEQAAGIGSARTYTALALQTISKQF
RCLKDAIAGQVRAANKSLGEDDCFGGKIEGSRLKYVDHHLRQQRALQQLG
MIQHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTR
SQVSNWFINARVRLWKPMVEEMYLEEMKEHEQNGSEDKSSKSNEDSVSRP
PTSPIGGNVRNQSGFSFMGSSELEGIAQGSPKKARNHEMMHSPNSVPSIN
MDVKPNEGSNEQLSMKFGDERQGRNGSSFMGNQTNFIGGFGQYPIGDIGR
FDAEQFTPTPRFTGNGVSLTLGLDSLPGTHQTFLPNQNIQLGRSLDIGEP
HEFGAINTSSPHSTAAYESISMQNPKRFAAQLLPDFVT
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mRNA from alignment at Chr_11-CM003613.1:34536115..34539364+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-KK1_003197_Cc_Asha_v1.0 ID=rna-KK1_003197_Cc_Asha_v1.0; Name=rna-KK1_003197; organism=Cajanus cajan; type=mRNA; length=3250bp; location=Sequence derived from: Chr_11-CM003613.1:34536115..34539364+ (Cajanus cajan
ATGGCGACATACTTTCATGGTAACTCCGAAATCCAATCAAGTGCCGCCGA CGGACTCCAAACACTCGTCCTCATGAACCCCGGCTACATCCACTACTCCG ACACGCCGTCGCAGCCGCAACCCTCACACGCCGCGGGAAACCTCGTGTTT CTCAACCCCGCCGCCGTCGccggcaacaacaacaactcctTCAGCCCTCA CGCGCCGCCCTCTCAGACCCAACAATTCGTTGGAATCCCTCTCCCCGCTT CCCAAGACCTCAACAACCACTCCATGCACGCGCACCACGACGTCTCGCCC ATGCATGGCTTCATGCCTCGCATGCAGTACAATCACTGGAACGCGCTTGA CCCCGCCTCGGCGGCGCGTGATACGTCACGCGCGCAACAGGGGCTTTCCT TGGGGCTGGGGCCGTTCCGGGAGGGTCAGGCGCCGGCCATGTCCGGCGAC GACCTGCGCGTGTCCGGCGGGTCGCCGTCTTCGGCTTCTGGGGTTACCAA CAACGGTGCTTCCGGCATTCAGAGTGTGCTTTTGAGCTCGAAGTACTTGA AGGCAGCGCATGAGCTTCTAGAAGAGGTTGTGAATGTTAACATTGGGATT GGCTCTGAGTTGGGAAAAAAGACCAAGGTGATGGGAGAATCATCCGCAGC TGGTAGTGGAGATGGTTCAGTTGCTGGGGATGGAAATGGCAAGCGTAGTT CTGAGTTATCAACTGCAGAAAGACAAGAAATTCAGATGAAGAAAGCTAAG TTAATCGGCATGCTTGATGAGGTGTGTGCtttccacttttttttatttac aacgATAACAAGTTTGGAATCTAAGACGTTGTTCATGCTATCCGATTTTT ACCACTAGACTACCCTAGTGATTCATGTGATGTTCACTTGCGTGTATGGT TCCAAATCTCATCAGGTTTTCTACATGTAATGACTTATAAATTCCAAATG TGATTTCTTTCTTCTCAACGGGTTTAGTGTTTTTGGCTTTAGTATTGGTA TGGCAACAACATGGGGTGGAAATCATATCATAGATTCAGCCAATATAATG GCAAAGCAAAGGAAGAAGTGTCTACATCTAGTATTGATAGTGTTTTTCTA TATGGAGaagtgtttatatttaatacttaatCGTGTCATGAATAGGATTG TTTTCAAAGGAAAATACTTGTGCCAGACTAAAAAGAATGTAATCTAATGA TTATTAAATGGAAAATTTTCAAGATTATGAAGGACTAATGGTCTTAAATT GCATGGATGTGGTTGCTTGGAATTAATTAGTGAAATATTTGTGATAGTTG AATTAATGGATAGTTTACTGATGTGGTTTTCTTTGGATGAAGGTGGAGCA AAGGTACAGGCAGTACCACCAACAGATGGAGATTGTGGTGTCTTCGTTTG AGCAAGCTGCGGGGATTGGTTCTGCGAGGACATACACTGCTCTTGCATTG CAAACAATCTCGAAGCAGTTTCGGTGTTTGAAAGATGCGATTGCAGGGCA GGTTCGTGCTGCTAATAAGAGCTTAGGAGAAGATGACTGCTTTGGAGGCA AAATAGAAGGTTCTAGGCTCAAATATGTGGACCATCATCTTCGGCAACAG AGAGCTCTCCAACAATTGGGAATGATCCAGCACAACGCTTGGAGACCCCA GAGAGGATTGCCTGAAAGATCCGTTTCTGTTCTTCGTGCTTGGCTCTTCG AACACTTCCTCCACCCGTAAGCACACTTAAATTGTTGGTGTTCAATGAGT ATGTCGagttgcatatatatatatatatataggttggAATTGAGATTGCA TGCTGGTTTTGTTGAGAAATTTGTAGGTTTTGAGCAAATTTGTGATTCTT CCAAGCACAAATATTACTATCACGTCGGAAACAACTCCATGACATCGAGC ATGATGCAAGTCAGGGACTCTCTGCCTTACTAACATCAGACACGAGATTG GTAGTGCCATATGAAGTTAGTTATGAGCTTTCTGACCTAGTCATGCTCGA TGTGGAATGAAAGACGTCTAGTGTGATTGCTCGAGGAGCTCTCTAACTTG attaccatatatatatatatatataagtgagaaagacccaTGAACATGAT GTGGTGTCAAATTTGTGTGATTTGCTTGTGATCCATTATTATAGttgtat tttttcattttatcctCTTATTCTATACTCATGTTAAGAGATTACAAGGC TTACAACATTCctttaaacacatttttaatgTTGACTATTAATTGCTTCA AAGATTATGCACATTGTGCTGAAATAACTGAGTTTGGTTCCAGATATCCC AAGGATTCGGACAAGCACATGCTCGCAAAACAAACGGGGCTAACTAGGAG CCAGGTAATTAGACTGATCGtaatttactttttcatttGATGTATTGTTC TTCTTCTAAATAAACTTTGGCTTAACAGGTTTCGAATTGGTTTATTAATG CTCGAGTTCGGCTTTGGAAGCCAATGGTGGAGGAAATGTACTTGGAGGAG ATGAAGGAGCATGAACAGAATGGTTCTGAGGACAAATCAAGCAAGAGCAA TGAAGATTCTGGTATGAAAATGGGAGCTCCACAAGAGAAAGGTCCTTCCA ATGAAACCGAGGCTATAAGTTTCAATCCCAAACAAGAGGTTTCTAAGAGC CAGAACACTGCTATGGTTTCAGTTTCTAGACCACCGACATCCCCGATTGG TGGGAATGTGAGAAACCAATCAGGATTCAGCTTCATGGGGTCATCAGAGC TAGAAGGGATCGCACAAGGAAGTCCCAAGAAAGCAAGGAACCATGAGATG ATGCATTCCCCAAATAGTGTCCCTTCAATTAACATGGATGTGAAGCCCAA TGAGGGAAGCAATGAGCAACTCTCAATGAAATTTGGAGATGAAAGGCAAG GCAGAAACGGGTCCTCCTTCATGGGAAACCAAACAAACTTCATTGGTGGC TTTGGACAGTATCCAATTGGTGATATTGGAAGGTTTGATGCAGAGCAGTT TACACCAACACCAAGGTTTACAGGTAATGGTGTTTCCCTCACTCTTGGTC TTGACTCATTACCAGGAACACATCAAACGTTTCTCCCAAACCAAAACATT CAACTAGGAAGAAGCTTGGACATTGGTGAACCACATGAGTTTGGTGCCAT AAACACTTCCTCTCCTCACTCTACAGCTGCTTATGAGAGTATCAGCATGC AAAACCCAAAGAGGTTTGCTGCACAATTGTTGCCAGACTTTGTTACCTAA
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Coding sequence (CDS) from alignment at Chr_11-CM003613.1:34536115..34539364+

>rna-KK1_003197_Cc_Asha_v1.0 ID=rna-KK1_003197_Cc_Asha_v1.0; Name=rna-KK1_003197; organism=Cajanus cajan; type=CDS; length=3834bp; location=Sequence derived from: Chr_11-CM003613.1:34536115..34539364+ (Cajanus cajan
ATGGCGACATACTTTCATGGTAACTCCGAAATCCAATCAAGTGCCGCCGA
CGGACTCCAAACACTCGTCCTCATGAACCCCGGCTACATCCACTACTCCG
ACACGCCGTCGCAGCCGCAACCCTCACACGCCGCGGGAAACCTCGTGTTT
CTCAACCCCGCCGCCGTCGccggcaacaacaacaactcctTCAGCCCTCA
CGCGCCGCCCTCTCAGACCCAACAATTCGTTGGAATCCCTCTCCCCGCTT
CCCAAGACCTCAACAACCACTCCATGCACGCGCACCACGACGTCTCGCCC
ATGCATGGCTTCATGCCTCGCATGCAGTACAATCACTGGAACGCGCTTGA
CCCCGCCTCGGCGGCGCGTGATACGTCACGCGCGCAACAGGGGCTTTCCT
TGGGGCTGGGGCCGTTCCGGGAGGGTCAGGCGCCGGCCATGTCCGGCGAC
GACCTGCGCGTGTCCGGCGGGTCGCCGTCTTCGGCTTCTGGGGTTACCAA
CAACGGTGCTTCCGGCATTCAGAGTGTGCTTTTGAGCTCGAAGTACTTGA
AGGCAGCGCATGAGCTTCTAGAAGAGGTTGTGAATGTTAACATTGGGATT
GGCTCTGAGTTGGGAAAAAAGACCAAGGTGATGGGAGAATCATCCGCAGC
TGGTAGTGGAGATGGTTCAGTTGCTGGGGATGGAAATGGCAAGCGTAGTT
CTGAGTTATCAACTGCAGAAAGACAAGAAATTCAGATGAAGAAAGCTAAG
TTAATCGGCATGCTTGATGAGATGGCGACATACTTTCATGGTAACTCCGA
AATCCAATCAAGTGCCGCCGACGGACTCCAAACACTCGTCCTCATGAACC
CCGGCTACATCCACTACTCCGACACGCCGTCGCAGCCGCAACCCTCACAC
GCCGCGGGAAACCTCGTGTTTCTCAACCCCGCCGCCGTCGccggcaacaa
caacaactcctTCAGCCCTCACGCGCCGCCCTCTCAGACCCAACAATTCG
TTGGAATCCCTCTCCCCGCTTCCCAAGACCTCAACAACCACTCCATGCAC
GCGCACCACGACGTCTCGCCCATGCATGGCTTCATGCCTCGCATGCAGTA
CAATCACTGGAACGCGCTTGACCCCGCCTCGGCGGCGCGTGATACGTCAC
GCGCGCAACAGGGGCTTTCCTTGGGGCTGGGGCCGTTCCGGGAGGGTCAG
GCGCCGGCCATGTCCGGCGACGACCTGCGCGTGTCCGGCGGGTCGCCGTC
TTCGGCTTCTGGGGTTACCAACAACGGTGCTTCCGGCATTCAGAGTGTGC
TTTTGAGCTCGAAGTACTTGAAGGCAGCGCATGAGCTTCTAGAAGAGGTT
GTGAATGTTAACATTGGGATTGGCTCTGAGTTGGGAAAAAAGACCAAGGT
GATGGGAGAATCATCCGCAGCTGGTAGTGGAGATGGTTCAGTTGCTGGGG
ATGGAAATGGCAAGCGTAGTTCTGAGTTATCAACTGCAGAAAGACAAGAA
ATTCAGATGAAGAAAGCTAAGTTAATCGGCATGCTTGATGAGGTGGAGCA
AAGGTACAGGCAGTACCACCAACAGATGGAGATTGTGGTGTCTTCGTTTG
AGCAAGCTGCGGGGATTGGTTCTGCGAGGACATACACTGCTCTTGCATTG
CAAACAATCTCGAAGCAGTTTCGGTGTTTGAAAGATGCGATTGCAGGGCA
GGTTCGTGCTGCTAATAAGAGCTTAGGAGAAGATGACTGCTTTGGAGGCA
AAATAGAAGGTTCTAGGCTCAAATATGTGGACCATCATCTTCGGCAACAG
AGAGCTCTCCAACAATTGGGAATGATCCAGCACAACGCTTGGAGACCCCA
GAGAGGATTGCCTGAAAGATCCGTTTCTGTTCTTCGTGCTTGGCTCTTCG
AACACTTCCTCCACCCGTGGAGCAAAGGTACAGGCAGTACCACCAACAGA
TGGAGATTGTGGTGTCTTCGTTTGAGCAAGCTGCGGGGATTGGTTCTGCG
AGGACATACACTGCTCTTGCATTGCAAACAATCTCGAAGCAGTTTCGGTG
TTTGAAAGATGCGATTGCAGGGCAGGTTCGTGCTGCTAATAAGAGCTTAG
GAGAAGATGACTGCTTTGGAGGCAAAATAGAAGGTTCTAGGCTCAAATAT
GTGGACCATCATCTTCGGCAACAGAGAGCTCTCCAACAATTGGGAATGAT
CCAGCACAACGCTTGGAGACCCCAGAGAGGATTGCCTGAAAGATCCGTTT
CTGTTCTTCGTGCTTGGCTCTTCGAACACTTCCTCCACCCATATCCCAAG
GATTCGGACAAGCACATGCTCGCAAAACAAACGGGGCTAACTAGGAGCCA
GATATCCCAAGGATTCGGACAAGCACATGCTCGCAAAACAAACGGGGCTA
ACTAGGAGCCAGGTTTCGAATTGGTTTATTAATGCTCGAGTTCGGCTTTG
GAAGCCAATGGTGGAGGAAATGTACTTGGAGGAGATGAAGGAGCATGAAC
AGAATGGTTCTGAGGACAAATCAAGCAAGAGCAATGAAGATTCTGGTTTC
GAATTGGTTTATTAATGCTCGAGTTCGGCTTTGGAAGCCAATGGTGGAGG
AAATGTACTTGGAGGAGATGAAGGAGCATGAACAGAATGGTTCTGAGGAC
AAATCAAGCAAGAGCAATGAAGATTCTGTTTCTAGACCACCGACATCCCC
GATTGGTGGGAATGTGAGAAACCAATCAGGATTCAGCTTCATGGGGTCAT
CAGAGCTAGAAGGGATCGCACAAGGAAGTCCCAAGAAAGCAAGGAACCAT
GAGATGATGCATTCCCCAAATAGTGTCCCTTCAATTAACATGGATGTGAA
GCCCAATGAGGGAAGCAATGAGCAACTCTCAATGAAATTTGGAGATGAAA
GGCAAGGCAGAAACGGGTCCTCCTTCATGGGAAACCAAACAAACTTCATT
GGTGGCTTTGGACAGTATCCAATTGGTGATATTGGAAGGTTTGATGCAGA
GCAGTTTACACCAACACCAAGGTTTACAGGTAATGGTGTTTCCCTCACTC
TTGGTCTTGACTCATTACCAGGAACACATCAAACGTTTCTCCCAAACCAA
AACATTCAACTAGGAAGAAGCTTGGACATTGGTGAACCACATGAGTTTGG
TGCCATAAACACTTCCTCTCCTCACTCTACAGCTGCTTATGAGAGTATCA
GCATGCAAAACCCAAAGAGGTTTGCTGCACAATTGTTGCCAGACTTTGTT
ACCTAATTTCTAGACCACCGACATCCCCGATTGGTGGGAATGTGAGAAAC
CAATCAGGATTCAGCTTCATGGGGTCATCAGAGCTAGAAGGGATCGCACA
AGGAAGTCCCAAGAAAGCAAGGAACCATGAGATGATGCATTCCCCAAATA
GTGTCCCTTCAATTAACATGGATGTGAAGCCCAATGAGGGAAGCAATGAG
CAACTCTCAATGAAATTTGGAGATGAAAGGCAAGGCAGAAACGGGTCCTC
CTTCATGGGAAACCAAACAAACTTCATTGGTGGCTTTGGACAGTATCCAA
TTGGTGATATTGGAAGGTTTGATGCAGAGCAGTTTACACCAACACCAAGG
TTTACAGGTAATGGTGTTTCCCTCACTCTTGGTCTTGACTCATTACCAGG
AACACATCAAACGTTTCTCCCAAACCAAAACATTCAACTAGGAAGAAGCT
TGGACATTGGTGAACCACATGAGTTTGGTGCCATAAACACTTCCTCTCCT
CACTCTACAGCTGCTTATGAGAGTATCAGCATGCAAAACCCAAAGAGGTT
TGCTGCACAATTGTTGCCAGACTTTGTTACCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR006563POX_dom
IPR001356HD
IPR008422KN_HD
IPR009057Homeodomain-like_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of DNA-templated transcription