rna-KK1_008721

Transcript Overview
Namerna-KK1_008721
Unique Namerna-KK1_008721_Cc_Asha_v1.0
TypemRNA
OrganismCajanus cajan (pigeon pea)
Sequence length1788
ProductInner membrane protein yhjX
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_3-CM003605.1supercontigChr_3-CM003605.1:4406253..4410066 +Cajanus cajan Asha genome v1.0n/a
Chr_3-CM003605.1supercontigChr_3-CM003605.1:4406253..4410066 +Cajanus cajan Asha genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Cajanus cajan Asha genome v1.02019-09-17
BLAST: C. cajan Asha genome v1.0 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
cccrR0667Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ccpsR648Pisum sativum Cameor genome v1aPisum sativum
caiccL0621Cicer arietinum ICC 4958 genome v2Cicer arietinum
ccpvR0943Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccvuR0932Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caccL0664Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
anccL0088Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccL0090Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccL0313Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccL0486Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asccL0868Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asccL0877Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cctifR0720Vicia faba cv. Tiffany genome v1.0Vicia faba
ccvfhR0735Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccvrvR0775Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccvuaR0866Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
ccvssR0829Vicia sativa cv. Studenica genome v1.0Vicia sativa
canccL0673Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjccL0947Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjccL0957Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjccL0967Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carccL0709Cicer arietinum
ccccaR0968Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccvumR0930Vigna umbellata FF25 genome v1.0Vigna umbellata
ccvumR0932Vigna umbellata FF25 genome v1.0Vigna umbellata
ccvumR0948Vigna umbellata FF25 genome v1.0Vigna umbellata

Orthologs
Gene/TranscriptAssemblySpecies
rna-XM_014645130.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Va04G020750.2Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vigun09g105300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
LR48_mrnaVigan04g080600Vigna angularis Jingnong 6 genome v1.1Vigna angularis
evm.model.Chr09.2643Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vum_02G01758.1Vigna umbellata FF25 genome v1.0Vigna umbellata

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Cc_v2.0_05709.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-KK1_008721gene-KK1_008721_Cc_Asha_v1.0Cajanus cajangene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-KK1_008721rna-KK1_008721_Cc_Asha_v1.0-proteinCajanus cajanpolypeptide
rna-KK1_008721_Cc_Asha_v1.0rna-KK1_008721_Cc_Asha_v1.0Cajanus cajanpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-KK1_008721_Cc_Asha_v1.0-exon-Chr_3-CM003605.1_Cc_Asha_v1.0-1571082112:4406253..4406588rna-KK1_008721_Cc_Asha_v1.0-exon-Chr_3-CM003605.1_Cc_Asha_v1.0-1571082112:4406253..4406588Cajanus cajanexon
rna-KK1_008721_Cc_Asha_v1.0-exon-Chr_3-CM003605.1_Cc_Asha_v1.0-1571847872:4406253..4406588rna-KK1_008721_Cc_Asha_v1.0-exon-Chr_3-CM003605.1_Cc_Asha_v1.0-1571847872:4406253..4406588Cajanus cajanexon
rna-KK1_008721_Cc_Asha_v1.0-exon-Chr_3-CM003605.1_Cc_Asha_v1.0-1571082112:4408267..4409240rna-KK1_008721_Cc_Asha_v1.0-exon-Chr_3-CM003605.1_Cc_Asha_v1.0-1571082112:4408267..4409240Cajanus cajanexon
rna-KK1_008721_Cc_Asha_v1.0-exon-Chr_3-CM003605.1_Cc_Asha_v1.0-1571847872:4408267..4409240rna-KK1_008721_Cc_Asha_v1.0-exon-Chr_3-CM003605.1_Cc_Asha_v1.0-1571847872:4408267..4409240Cajanus cajanexon
rna-KK1_008721_Cc_Asha_v1.0-exon-Chr_3-CM003605.1_Cc_Asha_v1.0-1571082112:4409589..4410066rna-KK1_008721_Cc_Asha_v1.0-exon-Chr_3-CM003605.1_Cc_Asha_v1.0-1571082112:4409589..4410066Cajanus cajanexon
rna-KK1_008721_Cc_Asha_v1.0-exon-Chr_3-CM003605.1_Cc_Asha_v1.0-1571847872:4409589..4410066rna-KK1_008721_Cc_Asha_v1.0-exon-Chr_3-CM003605.1_Cc_Asha_v1.0-1571847872:4409589..4410066Cajanus cajanexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-KK1_008721_Cc_Asha_v1.0-CDS-Chr_3-CM003605.1_Cc_Asha_v1.0-1571082112:4406253..4406588rna-KK1_008721_Cc_Asha_v1.0-CDS-Chr_3-CM003605.1_Cc_Asha_v1.0-1571082112:4406253..4406588Cajanus cajanCDS
rna-KK1_008721_Cc_Asha_v1.0-CDS-Chr_3-CM003605.1_Cc_Asha_v1.0-1571847872:4406253..4406588rna-KK1_008721_Cc_Asha_v1.0-CDS-Chr_3-CM003605.1_Cc_Asha_v1.0-1571847872:4406253..4406588Cajanus cajanCDS
rna-KK1_008721_Cc_Asha_v1.0-CDS-Chr_3-CM003605.1_Cc_Asha_v1.0-1571082112:4408267..4409240rna-KK1_008721_Cc_Asha_v1.0-CDS-Chr_3-CM003605.1_Cc_Asha_v1.0-1571082112:4408267..4409240Cajanus cajanCDS
rna-KK1_008721_Cc_Asha_v1.0-CDS-Chr_3-CM003605.1_Cc_Asha_v1.0-1571847872:4408267..4409240rna-KK1_008721_Cc_Asha_v1.0-CDS-Chr_3-CM003605.1_Cc_Asha_v1.0-1571847872:4408267..4409240Cajanus cajanCDS
rna-KK1_008721_Cc_Asha_v1.0-CDS-Chr_3-CM003605.1_Cc_Asha_v1.0-1571082112:4409589..4410066rna-KK1_008721_Cc_Asha_v1.0-CDS-Chr_3-CM003605.1_Cc_Asha_v1.0-1571082112:4409589..4410066Cajanus cajanCDS
rna-KK1_008721_Cc_Asha_v1.0-CDS-Chr_3-CM003605.1_Cc_Asha_v1.0-1571847872:4409589..4410066rna-KK1_008721_Cc_Asha_v1.0-CDS-Chr_3-CM003605.1_Cc_Asha_v1.0-1571847872:4409589..4410066Cajanus cajanCDS


Homology
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BLAST of rna-KK1_008721 vs. DB:Swiss
Match: NFD4_ARATH (Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana OX=3702 GN=NFD4 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 2.012e-13
Identity = 41/149 (27.52%), Postives = 79/149 (53.02%), Query Frame = 1 
Query:   40 HRWVVFVCAMWDMSFAGTSYMFGSISPVIKSSMGYNQKQVAFLSVAKDLGDNVGLLAGKISQASPIWGLILVGILQNVIGYGLVWLIVTHRFPSLPLWQLCILIFVGQNGSTYYNTAALVSCVQSFPESRGPVVGILKGFVGLSGAIWT 486
             +W V V A+W  +  GT++ F + S  +KS +G +Q ++ +L+VA DLG   G  +G      P+  ++        +GYG+ WL++T+   +LP   + +   +      ++NTA  + C++ FP +R   + +   F G+S A+++
Sbjct:   42 RKWTVLVAAIWIQASTGTNFDFSAYSSHLKSVLGISQVRLNYLAVASDLGKAFGWSSGIALGYFPLSVVLFAAAAMGFVGYGVQWLVITN-IITLPYSLVFLCCLLAGLSICWFNTACFILCIRHFPNNRALALSLTVSFNGISAALYS 189
The following BLAST results are available for this feature:
BLAST of rna-KK1_008721 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: C. cajan Asha genome v1.0 vs. Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
NFD4_ARATH2.012e-1327.52Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis ... [more]
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InterPro
Analysis Name: Cajanus cajan Asha genome v1.0
Date Performed: 2019-09-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010658Nodulin-likePFAMPF06813Nodulin-likecoord: 15..262
e-value: 4.3E-87
score: 291.7
NoneNo IPR availableGENE3D1.20.1250.20coord: 367..585
e-value: 7.7E-10
score: 40.3
NoneNo IPR availableCDDcd17354MFS_Mch1p_likecoord: 14..572
e-value: 5.45565E-119
score: 356.176
IPR036259MFS transporter superfamilySUPERFAMILY103473MFS general substrate transportercoord: 209..584
IPR036259MFS transporter superfamilySUPERFAMILY103473MFS general substrate transportercoord: 14..257

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-KK1_008721_Cc_Asha_v1.0 ID=rna-KK1_008721_Cc_Asha_v1.0; Name=rna-KK1_008721; organism=Cajanus cajan; type=mRNA; length=1788bp
ATGGTTTCGGTGTATGAGAAAGTGAAGGGGTTCGCGGGACACAGATGGGT
GGTGTTTGTGTGCGCGATGTGGGACATGTCCTTTGCGGGCACTTCCTACA
TGTTTGGAAGCATATCTCCGGTCATAAAGAGCAGCATGGGCTACAACCAG
AAGCAGGTCGCGTTCTTGAGCGTGGCTAAGGATTTGGGTGACAACGTTGG
TCTTCTTGCTGGAAAGATCAGCCAGGCTTCACCCATTTGGGGTCTCATAC
TTGTTGGGATCTTACAGAATGTCATCGGTTATGGCTTGGTCTGGCTCATA
GTCACACACAGGTTTCCCTCTTTGCCTTTGTGGCAGCTATGCATTCTAAT
CTTCGTGGGGCAAAATGGATCAACATATTACAACACAGCAGCACTAGTTT
CATGCGTGCAAAGTTTCCCTGAGAGCAGAGGCCCCGTGGTGGGGATATTG
AAGGGTTTCGTTGGCCTAAGTGGTGCAATTTGGACTCAAATAATAGCCAT
GATCAAACTCCCCGACCAAGCCTCTCTGATATTCATCATAGCAGTTGGAC
CCGCAATGGTTTCATGCACCTTCATGTTCATCATAAGACCCGTTGAGAGT
TATAGACAATCAAGAGCCTCTGATGGATCAGGCTTCATGTTTATCTACAG
CATTTGTCTCCTCTTGGCTGCTTATTTGATGGGGGTTTTGTTGCTAGAAA
ACATGCTTGATTTGGACCAAAGCACCATCACATTGTTTGCAGTTGTTTTG
ATCATTCTCATATTGCTTCCTATTATAGTTCCCATTCTATTGGTTTTCTT
CTCTGGACCCCAAAACCCTGACCAAGAAGCCCTTTTGGAACCACCAATGA
TAGCAGAAGAAACCAAGTCCAAGCATGTGCTTGGACTGGGTGAGAGTGAG
ACTAGTACTAGTAATTGTACTACAAAAGTAACTACCAAACATGTTGAAAA
TGAGAAGGCTTCTTCGAAGCTAGAAGTGCTTCCTTTGTCAGAAGGGCCTA
GGGACATATTTCAGTTTCAAGCTAGGCTTTGGCAAGGACTCACCAAGGCT
TTGAAGAAAATCAAGAGGAAAAATGGGCCACATAGAGGAGAGGATTTCAC
CTTGTCAGAAGCTATGGTCAAGGCTGATTTTTGGATCATGTTCTTCTCTC
TAGTCATGGGAGCTGGATCGGGCTTGACAATCATAAATAACATGGGTCAG
ATGTGTCAATCATTGGGAGACGACAATGTCAATGTTTATGTGTCGGTTAT
CAGCATATCCAACTTCCTTGGTCGTGTTGGTGGTGGCTACTTCTCAGAGG
TTATAGTAAGAAATTTGGGGTATCCGAGACTTGTTGCATTGGCAGTGATT
CAGGCAATTATGTCTTTGGGACTCTGCTACTACGTTTTGGGTTTGGTTGG
ACAAGTTTACGTGGTGGCCATATTCATGGGTTTTGGGTACGGTGCCCACT
GGTCAATTGCACTAGCAGCAGCTTCAGAGCTATTTGGCTTAAAGAACTTT
GGAACTTTGTACAATTTTCTCACTATGGCTAGTCCAGCAGGGTCTCTCTT
TTTGTCTGGATTTGTAGCAAGCACAATATACGACTATTATGCTGAGGAGC
AAGCAAAGCACCGAATGCCTCATGTGACTGGAACCAATGACTTGCTTCTT
TGCGAGGGTAACATTTGCTTCTCCATAACGTGTGGAATTTTGGCACTAGT
TTGCATTCTTGCGGCTTCTTTGAGCTTGGTCTCGGTTCACCGAACTAAGA
GATTCTATGCCCAACTTTATGGGGAGTCTCGAACATGA
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protein sequence of rna-KK1_008721_Cc_Asha_v1.0

>rna-KK1_008721_Cc_Asha_v1.0 ID=rna-KK1_008721_Cc_Asha_v1.0; Name=rna-KK1_008721_Cc_Asha_v1.0; organism=Cajanus cajan; type=polypeptide; length=595bp
MVSVYEKVKGFAGHRWVVFVCAMWDMSFAGTSYMFGSISPVIKSSMGYNQ
KQVAFLSVAKDLGDNVGLLAGKISQASPIWGLILVGILQNVIGYGLVWLI
VTHRFPSLPLWQLCILIFVGQNGSTYYNTAALVSCVQSFPESRGPVVGIL
KGFVGLSGAIWTQIIAMIKLPDQASLIFIIAVGPAMVSCTFMFIIRPVES
YRQSRASDGSGFMFIYSICLLLAAYLMGVLLLENMLDLDQSTITLFAVVL
IILILLPIIVPILLVFFSGPQNPDQEALLEPPMIAEETKSKHVLGLGESE
TSTSNCTTKVTTKHVENEKASSKLEVLPLSEGPRDIFQFQARLWQGLTKA
LKKIKRKNGPHRGEDFTLSEAMVKADFWIMFFSLVMGAGSGLTIINNMGQ
MCQSLGDDNVNVYVSVISISNFLGRVGGGYFSEVIVRNLGYPRLVALAVI
QAIMSLGLCYYVLGLVGQVYVVAIFMGFGYGAHWSIALAAASELFGLKNF
GTLYNFLTMASPAGSLFLSGFVASTIYDYYAEEQAKHRMPHVTGTNDLLL
CEGNICFSITCGILALVCILAASLSLVSVHRTKRFYAQLYGESRT
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mRNA from alignment at Chr_3-CM003605.1:4406253..4410066+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-KK1_008721_Cc_Asha_v1.0 ID=rna-KK1_008721_Cc_Asha_v1.0; Name=rna-KK1_008721; organism=Cajanus cajan; type=mRNA; length=3814bp; location=Sequence derived from: Chr_3-CM003605.1:4406253..4410066+ (Cajanus cajan
ATGGTTTCGGTGTATGAGAAAGTGAAGGGGTTCGCGGGACACAGATGGGT
GGTGTTTGTGTGCGCGATGTGGGACATGTCCTTTGCGGGCACTTCCTACA
TGTTTGGAAGCATATCTCCGGTCATAAAGAGCAGCATGGGCTACAACCAG
AAGCAGGTCGCGTTCTTGAGCGTGGCTAAGGATTTGGGTGACAACGTTGG
TCTTCTTGCTGGAAAGATCAGCCAGGCTTCACCCATTTGGGGTCTCATAC
TTGTTGGGATCTTACAGAATGTCATCGGTTATGGCTTGGTCTGGCTCATA
GTCACACACAGGTTTCCCTCTTTGCCTTTGTGGCAGGTCAGTTTCATTCA
ATTAATCACTAACTCACTCTTTTCAGATTTCTATGCTTCTGTACCCAAtt
ctttcctctcttcactttGTGCTCAGATAGGTTCAATTCCGGAGTATATA
GATTGTTCTTTTATTCACCAATAACTCCACTACCTCAACCAACTAAGCTT
ATGCTAAACTAGCTAGCCCCCTTTGACccttttctagttttttttttttt
ttttttttacaacttttgtAGTTATTTAGGCATCTTTTACTTCGTTTTTT
AGTCACATGGCAGAAGGAAAACACAGGACAAGAGATAAGGTAAAATatat
aggtaaaataaaaaaataaatatgagaaattctaaattcttttatttttt
ggagaatttgaaattctactattcgTAAAAttatgcttgaatttcaaatt
ctttgtaaattcttcatcaaaataagacatttcacttcaaaaaatttgaa
attcttcaaataaatgaattattctaTATAAATTTTCCATCTAAACACAt
cataaggattttttttcaaaaaataaaataaaattttagaagttaacttt
tttcttcttttgttttttactttCTCTTCAACtgagtagaaaaaaaaata
aatctttatatatattttttctttcttccttgtTTTCTTCCTCcgtcata
tattatttaaatttaacctCATAAATGATAAATCAACACTAGTCTTAAAT
ATCGATATTAACCGCgctaaaactctaattttaattatttaaatcttGTT
CTTTGGGAtgtgaaaagaataaaataaaagggttaTACTTGTGAGCACTG
AGCACTTCCTTGATTATTGTGCCTTGTCGGTAGTCTTTCCATCTTGATTG
GCTGGGAAAATTAACTGGGTCAACGGGTCCTTACCTCTTGTGTCGTGATC
ATATTGATTCACCATAGTGACACGATAATATGTAGAAGGAATAAAAAAAC
AGTTGGGTgatattgttttcattttaccTCCTATGTTTTGATAGGATCGA
GATAGTTGTTAAGAAAAGATTGGGAGGGAAAATATTCAATTGTTAAAAGT
TAACATTGATCACTTGACTTTACAGTTTACACTCTTTCTTTTGCTCTGTT
CTATATTGCAACTATTTTCTTTCAGAAAAGAAGGGGCCTCTCGACATGAT
CGTGATTTTATATCTGTTCCCTTTTCCTAATGAAACACTGGTAATGGTAG
ATCTTTTGTAGCGCCACAGAATGAACTATCCTCTCAATTCTCAAAAGGAA
ATACCTTTTACAAGTACAGTTTTTGTTTGTTACAATGCTAGTGCAATATA
AATATGCTTTGCCCTCATGCTACCACATACACGTATTATATGAAAAAGGT
TTTAGCAAGAATTTACTTTCAAGTGTTTGCATGAAatttaaaacaagaat
aaaacaTGTTTTTGTGTCTGtacaataaaacttttaattcagtCCTCATG
TATACACAAGTATTTTAGTTTCATCTTCACTCAGTGTTACAGTCGTAAAA
TTCAGtctgtttgaatacaaatttaaatttaaaaagctTTTAAGAGTTTT
TCGACCGAAAAGATTAtctctcacttatatattctattttgacaTTATCT
TTAGTCTACATGTGACTTTGGTCATGCCGGTAAAATGATTTGTTAACCAG
GTGCTGATTTGCAGCTATGCATTCTAATCTTCGTGGGGCAAAATGGATCA
ACATATTACAACACAGCAGCACTAGTTTCATGCGTGCAAAGTTTCCCTGA
GAGCAGAGGCCCCGTGGTGGGGATATTGAAGGGTTTCGTTGGCCTAAGTG
GTGCAATTTGGACTCAAATAATAGCCATGATCAAACTCCCCGACCAAGCC
TCTCTGATATTCATCATAGCAGTTGGACCCGCAATGGTTTCATGCACCTT
CATGTTCATCATAAGACCCGTTGAGAGTTATAGACAATCAAGAGCCTCTG
ATGGATCAGGCTTCATGTTTATCTACAGCATTTGTCTCCTCTTGGCTGCT
TATTTGATGGGGGTTTTGTTGCTAGAAAACATGCTTGATTTGGACCAAAG
CACCATCACATTGTTTGCAGTTGTTTTGATCATTCTCATATTGCTTCCTA
TTATAGTTCCCATTCTATTGGTTTTCTTCTCTGGACCCCAAAACCCTGAC
CAAGAAGCCCTTTTGGAACCACCAATGATAGCAGAAGAAACCAAGTCCAA
GCATGTGCTTGGACTGGGTGAGAGTGAGACTAGTACTAGTAATTGTACTA
CAAAAGTAACTACcaaacatgttgaaaatgagaagGCTTCTTCGAAGCTA
GAAGTGCTTCCTTTGTCAGAAGGGCCTAGGGACATATTTCAGTTTCAAGC
TAGGCTTTGGCAAGGACTCACCAAGGCtttgaagaaaatcaagagGAAAA
ATGGGCCACATAGAGGAGAGGATTTCACCTTGTCAGAAGCTATGGTCAAG
GCTGATTTTTGGATCATGTTCTTCTCTCTAGTCATGGGAGCTGGATCGGG
CTTGACAATCATAAATAACATGGGTCAGATGTGTCAATCATTGGGAGACG
ACAATGTCAATGTTTATGTGTCGGTTATCAGCATATCCAACTTCCTTGGT
CGTGTTGGTGGTGGCTACTTCTCAGAGGTTATAGTAAGGTACTATTCCTA
GTTCCTACTCTTCTTTTCAATTCTAGTTTATCTTCCAAGAGTAAACCCCA
TTTTTGTTAATACTAGTTATTTTATTCAGTTCTTTACAAAACTCTCCATT
TTTACccctcaaatttataattttctgattttataaaaggttttttattt
ttaacaataatgaTATATGATATCCCAACACCCTTTTAATGGTAAAGTTT
TATTCTGTCAATAAATCACTATTAGTATAATTAGAGACTAAAACTTAAAC
TTCATGGACTAAAGTTGGAATTACTTGTGTTATCCTAGACTGATCTATAC
CACGTGTGTTTTTCTGAATGGTTTGTTTTGAAACAGAAATTTGGGGTATC
CGAGACTTGTTGCATTGGCAGTGATTCAGGCAATTATGTCTTTGGGACTC
TGCTACTACGTTTTGGGTTTGGTTGGACAAGTTTACGTGGTGGCCATATT
CATGGGTTTTGGGTACGGTGCCCACTGGTCAATTGCACTAGCAGCAGCTT
CAGAGCTATTTGGCTTAAAGAACTTTGGAACTTTGTACAATTTTCTCACT
ATGGCTAGTCCAGCAGGGTCTCTCTTTTTGTCTGGATTTGTAGCAAGCAC
AATATACGACTATTATGCTGAGGAGCAAGCAAAGCACCGAATGCCTCATG
TGACTGGAACCAATGACTTGCTTCTTTGCGAGGGTAACATTTGCTTCTCC
ATAACGTGTGGAATTTTGGCACTAGTTTGCATTCTTGCGGCTTCTTTGAG
CTTGGTCTCGGTTCACCGAACTAAGAGATTCTATGCCCAACTTTATGGGG
AGTCTCGAACATGA
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Coding sequence (CDS) from alignment at Chr_3-CM003605.1:4406253..4410066+

>rna-KK1_008721_Cc_Asha_v1.0 ID=rna-KK1_008721_Cc_Asha_v1.0; Name=rna-KK1_008721; organism=Cajanus cajan; type=CDS; length=3576bp; location=Sequence derived from: Chr_3-CM003605.1:4406253..4410066+ (Cajanus cajan
ATGGTTTCGGTGTATGAGAAAGTGAAGGGGTTCGCGGGACACAGATGGGT
GGTGTTTGTGTGCGCGATGTGGGACATGTCCTTTGCGGGCACTTCCTACA
TGTTTGGAAGCATATCTCCGGTCATAAAGAGCAGCATGGGCTACAACCAG
AAGCAGGTCGCGTTCTTGAGCGTGGCTAAGGATTTGGGTGACAACGTTGG
TCTTCTTGCTGGAAAGATCAGCCAGGCTTCACCCATTTGGGGTCTCATAC
TTGTTGGGATCTTACAGAATGTCATCGGTTATGGCTTGGTCTGGCTCATA
GTCACACACAGGTTTCCCTCTTTGCCTTTGTGGCAGATGGTTTCGGTGTA
TGAGAAAGTGAAGGGGTTCGCGGGACACAGATGGGTGGTGTTTGTGTGCG
CGATGTGGGACATGTCCTTTGCGGGCACTTCCTACATGTTTGGAAGCATA
TCTCCGGTCATAAAGAGCAGCATGGGCTACAACCAGAAGCAGGTCGCGTT
CTTGAGCGTGGCTAAGGATTTGGGTGACAACGTTGGTCTTCTTGCTGGAA
AGATCAGCCAGGCTTCACCCATTTGGGGTCTCATACTTGTTGGGATCTTA
CAGAATGTCATCGGTTATGGCTTGGTCTGGCTCATAGTCACACACAGGTT
TCCCTCTTTGCCTTTGTGGCAGCTATGCATTCTAATCTTCGTGGGGCAAA
ATGGATCAACATATTACAACACAGCAGCACTAGTTTCATGCGTGCAAAGT
TTCCCTGAGAGCAGAGGCCCCGTGGTGGGGATATTGAAGGGTTTCGTTGG
CCTAAGTGGTGCAATTTGGACTCAAATAATAGCCATGATCAAACTCCCCG
ACCAAGCCTCTCTGATATTCATCATAGCAGTTGGACCCGCAATGGTTTCA
TGCACCTTCATGTTCATCATAAGACCCGTTGAGAGTTATAGACAATCAAG
AGCCTCTGATGGATCAGGCTTCATGTTTATCTACAGCATTTGTCTCCTCT
TGGCTGCTTATTTGATGGGGGTTTTGTTGCTAGAAAACATGCTTGATTTG
GACCAAAGCACCATCACATTGTTTGCAGTTGTTTTGATCATTCTCATATT
GCTTCCTATTATAGTTCCCATTCTATTGGTTTTCTTCTCTGGACCCCAAA
ACCCTGACCAAGAAGCCCTTTTGGAACCACCAATGATAGCAGAAGAAACC
AAGTCCAAGCATGTGCTTGGACTGGGTGAGAGTGAGACTAGTACTAGTAA
TTGTACTACAAAAGTAACTACcaaacatgttgaaaatgagaagGCTTCTT
CGAAGCTAGAAGTGCTTCCTTTGTCAGAAGGGCCTAGGGACATATTTCAG
TTTCAAGCTAGGCTTTGGCAAGGACTCACCAAGGCtttgaagaaaatcaa
gagGAAAAATGGGCCACATAGAGGAGAGGATTTCACCTTGTCAGAAGCTA
TGGTCAAGGCTGATTTTTGGATCATGTTCTTCTCTCTAGTCATGGGAGCT
GGATCGGGCTTGACAATCATAAATAACATGGGTCAGATGTGTCAATCATT
GGGAGACGACAATGTCAATGTTTATGTGTCGGTTATCAGCATATCCAACT
TCCTTGGTCGTGTTGGTGGTGGCTACTTCTCAGAGGTTATAGTAAGCTAT
GCATTCTAATCTTCGTGGGGCAAAATGGATCAACATATTACAACACAGCA
GCACTAGTTTCATGCGTGCAAAGTTTCCCTGAGAGCAGAGGCCCCGTGGT
GGGGATATTGAAGGGTTTCGTTGGCCTAAGTGGTGCAATTTGGACTCAAA
TAATAGCCATGATCAAACTCCCCGACCAAGCCTCTCTGATATTCATCATA
GCAGTTGGACCCGCAATGGTTTCATGCACCTTCATGTTCATCATAAGACC
CGTTGAGAGTTATAGACAATCAAGAGCCTCTGATGGATCAGGCTTCATGT
TTATCTACAGCATTTGTCTCCTCTTGGCTGCTTATTTGATGGGGGTTTTG
TTGCTAGAAAACATGCTTGATTTGGACCAAAGCACCATCACATTGTTTGC
AGTTGTTTTGATCATTCTCATATTGCTTCCTATTATAGTTCCCATTCTAT
TGGTTTTCTTCTCTGGACCCCAAAACCCTGACCAAGAAGCCCTTTTGGAA
CCACCAATGATAGCAGAAGAAACCAAGTCCAAGCATGTGCTTGGACTGGG
TGAGAGTGAGACTAGTACTAGTAATTGTACTACAAAAGTAACTACcaaac
atgttgaaaatgagaagGCTTCTTCGAAGCTAGAAGTGCTTCCTTTGTCA
GAAGGGCCTAGGGACATATTTCAGTTTCAAGCTAGGCTTTGGCAAGGACT
CACCAAGGCtttgaagaaaatcaagagGAAAAATGGGCCACATAGAGGAG
AGGATTTCACCTTGTCAGAAGCTATGGTCAAGGCTGATTTTTGGATCATG
TTCTTCTCTCTAGTCATGGGAGCTGGATCGGGCTTGACAATCATAAATAA
CATGGGTCAGATGTGTCAATCATTGGGAGACGACAATGTCAATGTTTATG
TGTCGGTTATCAGCATATCCAACTTCCTTGGTCGTGTTGGTGGTGGCTAC
TTCTCAGAGGTTATAGTAAGAAATTTGGGGTATCCGAGACTTGTTGCATT
GGCAGTGATTCAGGCAATTATGTCTTTGGGACTCTGCTACTACGTTTTGG
GTTTGGTTGGACAAGTTTACGTGGTGGCCATATTCATGGGTTTTGGGTAC
GGTGCCCACTGGTCAATTGCACTAGCAGCAGCTTCAGAGCTATTTGGCTT
AAAGAACTTTGGAACTTTGTACAATTTTCTCACTATGGCTAGTCCAGCAG
GGTCTCTCTTTTTGTCTGGATTTGTAGCAAGCACAATATACGACTATTAT
GCTGAGGAGCAAGCAAAGCACCGAATGCCTCATGTGACTGGAACCAATGA
CTTGCTTCTTTGCGAGGGTAACATTTGCTTCTCCATAACGTGTGGAATTT
TGGCACTAGTTTGCATTCTTGCGGCTTCTTTGAGCTTGGTCTCGGTTCAC
CGAACTAAGAGATTCTATGCCCAACTTTATGGGGAGTCTCGAACATGAAA
ATTTGGGGTATCCGAGACTTGTTGCATTGGCAGTGATTCAGGCAATTATG
TCTTTGGGACTCTGCTACTACGTTTTGGGTTTGGTTGGACAAGTTTACGT
GGTGGCCATATTCATGGGTTTTGGGTACGGTGCCCACTGGTCAATTGCAC
TAGCAGCAGCTTCAGAGCTATTTGGCTTAAAGAACTTTGGAACTTTGTAC
AATTTTCTCACTATGGCTAGTCCAGCAGGGTCTCTCTTTTTGTCTGGATT
TGTAGCAAGCACAATATACGACTATTATGCTGAGGAGCAAGCAAAGCACC
GAATGCCTCATGTGACTGGAACCAATGACTTGCTTCTTTGCGAGGGTAAC
ATTTGCTTCTCCATAACGTGTGGAATTTTGGCACTAGTTTGCATTCTTGC
GGCTTCTTTGAGCTTGGTCTCGGTTCACCGAACTAAGAGATTCTATGCCC
AACTTTATGGGGAGTCTCGAACATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR010658Nodulin-like
IPR036259MFS_trans_sf