rna-KK1_010194

Transcript Overview
Namerna-KK1_010194
Unique Namerna-KK1_010194_Cc_Asha_v1.0
TypemRNA
OrganismCajanus cajan (pigeon pea)
Sequence length891
ProductF-box protein PP2-A15
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_3-CM003605.1supercontigChr_3-CM003605.1:19326477..19330437 +Cajanus cajan Asha genome v1.0n/a
Chr_3-CM003605.1supercontigChr_3-CM003605.1:19326477..19330437 +Cajanus cajan Asha genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Cajanus cajan Asha genome v1.02019-09-17
BLAST: C. cajan Asha genome v1.0 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
cccrR0698Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
cccrR0716Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ccpsR595Pisum sativum Cameor genome v1aPisum sativum
ccpsR599Pisum sativum Cameor genome v1aPisum sativum
ccpsR666Pisum sativum Cameor genome v1aPisum sativum
caiccL0307Cicer arietinum ICC 4958 genome v2Cicer arietinum
caiccL0483Cicer arietinum ICC 4958 genome v2Cicer arietinum
ccpvR0877Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccpvR0921Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccvuR0865Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccvuR0914Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caccL0101Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caccL0335Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caccL0519Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
anccL0354Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccL0749Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccL1159Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccL1346Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccL1443Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccL1534Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asccL0216Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asccL0634Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cctifR0754Vicia faba cv. Tiffany genome v1.0Vicia faba
cctifR0782Vicia faba cv. Tiffany genome v1.0Vicia faba
ccvfhR0770Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccvfhR0802Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccvrvR0763Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccvrvR0804Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccvuaR0787Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
ccvuaR0833Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
ccvssR0852Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccvssR0902Vicia sativa cv. Studenica genome v1.0Vicia sativa
canccL0102Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canccL0332Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canccL0516Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjccL0115Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjccL0667Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjccL0788Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carccL0111Cicer arietinum
carccL0351Cicer arietinum
carccL0553Cicer arietinum
ccccaR0930Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccccaR0950Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccccaR0982Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccvumR0892Vigna umbellata FF25 genome v1.0Vigna umbellata
ccvumR0966Vigna umbellata FF25 genome v1.0Vigna umbellata
ccvumR0982Vigna umbellata FF25 genome v1.0Vigna umbellata

Orthologs
Gene/TranscriptAssemblySpecies
jg31860.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Hedin2.R1.5g144960.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-TanjilR_02598Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Ca_07813.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
evm.model.Chr01.1608.1.62113176Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Phvul.001G185000.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vum_08G02150.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vum_04G02455.1Vigna umbellata FF25 genome v1.0Vigna umbellata
evm.model.Chr07.2169_Chr07.2170.1.62122c09Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Phvul.007G224700.2Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-XM_014658838.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vigun07g065300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-XM_004494070.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Vigun01g168000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
LR48_mrnaVigan02g076400Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Ca_00751Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Va03G074050.2Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-XM_014640841.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Va02G019030.2Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vfaba.Tiffany.R1.5g116800.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Cr_05354.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Psat3g037040.1Pisum sativum Cameor genome v1aPisum sativum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Cc_v2.0_07849.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-KK1_010194gene-KK1_010194_Cc_Asha_v1.0Cajanus cajangene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-KK1_010194rna-KK1_010194_Cc_Asha_v1.0-proteinCajanus cajanpolypeptide
rna-KK1_010194_Cc_Asha_v1.0rna-KK1_010194_Cc_Asha_v1.0Cajanus cajanpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-KK1_010194_Cc_Asha_v1.0-exon-Chr_3-CM003605.1_Cc_Asha_v1.0-1571082112:19326477..19326782rna-KK1_010194_Cc_Asha_v1.0-exon-Chr_3-CM003605.1_Cc_Asha_v1.0-1571082112:19326477..19326782Cajanus cajanexon
rna-KK1_010194_Cc_Asha_v1.0-exon-Chr_3-CM003605.1_Cc_Asha_v1.0-1571847872:19326477..19326782rna-KK1_010194_Cc_Asha_v1.0-exon-Chr_3-CM003605.1_Cc_Asha_v1.0-1571847872:19326477..19326782Cajanus cajanexon
rna-KK1_010194_Cc_Asha_v1.0-exon-Chr_3-CM003605.1_Cc_Asha_v1.0-1571082112:19326861..19326979rna-KK1_010194_Cc_Asha_v1.0-exon-Chr_3-CM003605.1_Cc_Asha_v1.0-1571082112:19326861..19326979Cajanus cajanexon
rna-KK1_010194_Cc_Asha_v1.0-exon-Chr_3-CM003605.1_Cc_Asha_v1.0-1571847872:19326861..19326979rna-KK1_010194_Cc_Asha_v1.0-exon-Chr_3-CM003605.1_Cc_Asha_v1.0-1571847872:19326861..19326979Cajanus cajanexon
rna-KK1_010194_Cc_Asha_v1.0-exon-Chr_3-CM003605.1_Cc_Asha_v1.0-1571082112:19329972..19330437rna-KK1_010194_Cc_Asha_v1.0-exon-Chr_3-CM003605.1_Cc_Asha_v1.0-1571082112:19329972..19330437Cajanus cajanexon
rna-KK1_010194_Cc_Asha_v1.0-exon-Chr_3-CM003605.1_Cc_Asha_v1.0-1571847872:19329972..19330437rna-KK1_010194_Cc_Asha_v1.0-exon-Chr_3-CM003605.1_Cc_Asha_v1.0-1571847872:19329972..19330437Cajanus cajanexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-KK1_010194_Cc_Asha_v1.0-CDS-Chr_3-CM003605.1_Cc_Asha_v1.0-1571082112:19326477..19326782rna-KK1_010194_Cc_Asha_v1.0-CDS-Chr_3-CM003605.1_Cc_Asha_v1.0-1571082112:19326477..19326782Cajanus cajanCDS
rna-KK1_010194_Cc_Asha_v1.0-CDS-Chr_3-CM003605.1_Cc_Asha_v1.0-1571847872:19326477..19326782rna-KK1_010194_Cc_Asha_v1.0-CDS-Chr_3-CM003605.1_Cc_Asha_v1.0-1571847872:19326477..19326782Cajanus cajanCDS
rna-KK1_010194_Cc_Asha_v1.0-CDS-Chr_3-CM003605.1_Cc_Asha_v1.0-1571082112:19326861..19326979rna-KK1_010194_Cc_Asha_v1.0-CDS-Chr_3-CM003605.1_Cc_Asha_v1.0-1571082112:19326861..19326979Cajanus cajanCDS
rna-KK1_010194_Cc_Asha_v1.0-CDS-Chr_3-CM003605.1_Cc_Asha_v1.0-1571847872:19326861..19326979rna-KK1_010194_Cc_Asha_v1.0-CDS-Chr_3-CM003605.1_Cc_Asha_v1.0-1571847872:19326861..19326979Cajanus cajanCDS
rna-KK1_010194_Cc_Asha_v1.0-CDS-Chr_3-CM003605.1_Cc_Asha_v1.0-1571082112:19329972..19330437rna-KK1_010194_Cc_Asha_v1.0-CDS-Chr_3-CM003605.1_Cc_Asha_v1.0-1571082112:19329972..19330437Cajanus cajanCDS
rna-KK1_010194_Cc_Asha_v1.0-CDS-Chr_3-CM003605.1_Cc_Asha_v1.0-1571847872:19329972..19330437rna-KK1_010194_Cc_Asha_v1.0-CDS-Chr_3-CM003605.1_Cc_Asha_v1.0-1571847872:19329972..19330437Cajanus cajanCDS


Homology
BLAST of rna-KK1_010194 vs. DB:Swiss
Match: P2A15_ARATH (F-box protein PP2-A15 OS=Arabidopsis thaliana OX=3702 GN=PP2A15 PE=2 SV=1)

HSP 1 Score: 429.483 bits (1103), Expect = 1.397e-151
Identity = 199/268 (74.25%), Postives = 236/268 (88.06%), Query Frame = 1
Query:   43 VAPGLGDIPEGCVARVFLHLTPPEICNLARLNRSFRGAASADSVWEAKLPPNYHDLLLLMPPERHQHLSKKNIFALLSRPVPFDHGYKEVWLDRVTGRVCISISAKAMSITGIDDRRYWTWLPTEESRFNTVAYLQQIWWFEVDGEVNFPLPADIYTLSFRLHLGRFSKRLGRRVCNYEHTHGWDIKPVRFQLSTMDGQQASFECCLDENEPDDAHGNHKRGHWVDYKVGEFIVSGSEPTTKVRFSMKQIDCTHSKGGLCVDSVFIIP 846
            + PGLGDIPE CVA VF++LTPPEICNLA LNRSFRGAAS+DSVWE KLP NY DLL L+PPER+  LSKK+IFA+LSRP+PFD   KEVW+DRVTGRVC++ISA+ MSITGI+DRRYW W+PTEESRF+ VAYLQQIWWFEVDG V F LP  +Y+LSFR+HLGRF+KRLGRRVC++E THGWD+KPVRF LST DGQ+AS E  LD+ E ++A G HKRG+W++Y+VGEFIV+GSEP+T++++SMKQIDCTHSKGGLCVDSVFI P
Sbjct:   17 MGPGLGDIPESCVACVFMYLTPPEICNLAGLNRSFRGAASSDSVWEKKLPENYQDLLDLLPPERYHSLSKKDIFAVLSRPIPFDDDNKEVWIDRVTGRVCMAISARGMSITGIEDRRYWNWIPTEESRFHVVAYLQQIWWFEVDGTVRFHLPPGVYSLSFRIHLGRFTKRLGRRVCHFELTHGWDLKPVRFSLSTSDGQEASCEYYLDDVERNEALGKHKRGYWIEYRVGEFIVNGSEPSTEIQWSMKQIDCTHSKGGLCVDSVFINP 284          
BLAST of rna-KK1_010194 vs. DB:Swiss
Match: P2A12_ARATH (F-box protein PP2-A12 OS=Arabidopsis thaliana OX=3702 GN=P2A12 PE=2 SV=1)

HSP 1 Score: 315.849 bits (808), Expect = 6.633e-107
Identity = 151/275 (54.91%), Postives = 198/275 (72.00%), Query Frame = 1
Query:   43 VAPGLGDIPEGCVARVFLHLTPPEICNLARLNRSFRGAASADSVWEAKLPPNYHDLLLLMPPERHQHLSKKNIFALLSRPVPFDHGYKEVWLDRVTGRVCISISAKAMSITGIDDRRYWTWLPTEESRFNTVAYLQQIWWFEVDGEVNFPLPADIYTLSFRLHLGRFSKRLGRRVCNYEHTHGWDIKPVRFQLSTMDGQQASFECCLDENEPDDAHGNHKRGHWVDYKVGEFIVSGSE-PTTKVRFSMKQIDCTHSKGGLCVDSVFIIPSNLRER 864
            + PGLGD+PE CVA +  +L P EIC  ++LNR+FRGA+ AD VWE+KLP NY D+L  +     ++L K++++A LSR   FD   K+VW+D+ T  VC+SISAK +SITGIDDRRYW+ +PT+ESRF++VAYLQQIWWFEVDGE++FP P   Y++ FRL LGR  K  GRRVCN E  HGWDIKPVRFQL T DGQ +S +C L E           RG+W+ Y  G+ +V  S   +TK++FSM QIDCTH+KGGL +DSV + PS+ +++
Sbjct:   24 LKPGLGDLPEACVAIIVENLDPVEICRFSKLNRAFRGASWADCVWESKLPQNYRDVLEKILGGFPENLQKRHLYAFLSRINSFDDATKKVWIDKRTSGVCLSISAKGLSITGIDDRRYWSHIPTDESRFSSVAYLQQIWWFEVDGEIDFPFPVGTYSIFFRLQLGRSGKWFGRRVCNTEQVHGWDIKPVRFQLWTEDGQYSSSQCMLTE-----------RGNWIHYHAGDVVVRESNRSSTKIKFSMTQIDCTHTKGGLSLDSVVVYPSSCKDQ 287          
BLAST of rna-KK1_010194 vs. DB:Swiss
Match: P2A13_ARATH (F-box protein PP2-A13 OS=Arabidopsis thaliana OX=3702 GN=PP2A13 PE=1 SV=1)

HSP 1 Score: 309.301 bits (791), Expect = 2.430e-104
Identity = 152/275 (55.27%), Postives = 192/275 (69.82%), Query Frame = 1
Query:   55 LGDIPEGCVARVFLHLTPPEICNLARLNRSFRGAASADSVWEAKLPPNYHDLLLLMPPE-RHQHLSKKNIFALLSRPVPFDHGYKEVWLDRVTGRVCISISAKAMSITGIDDRRYWTWLPTEESRFNTVAYLQQIWWFEVDGEVNFPLPADIYTLSFRLHLGRFSKRLGRRVCNYEHTHGWDIKPVRFQLSTMDGQQASFECCLDENEPDDAHGNHKRGHWVDYKVGEFIVSGSEPTTKVRFSMKQIDCTHSKGGLCVDSVFIIPSN-LRERTGS 873
            L D+PE CVA +   L PPEIC LARLNR FR A+SAD +WE+KLP NY  +   +  E     L KK+++A LS+P  FD G KE+W+D+ TGR+C+SIS+KA+ ITGIDDRRYW+ +PT+ESRF + AY+QQIWWFEV GE     P+  Y+L FR+ LG+ SKRLGRR+CN EH HGWDIKPVRFQL+T D QQA   C L+ N           G W  Y VG+F V+  + +T ++FSM QIDCTH+KGGLC+DSV I+P    +E  GS
Sbjct:   25 LVDLPENCVALIMTRLDPPEICRLARLNRMFRRASSADFIWESKLPANYRVIAHKVFDEITLTKLIKKDLYAKLSQPNLFDDGTKELWIDKNTGRLCLSISSKALRITGIDDRRYWSHIPTDESRFQSAAYVQQIWWFEVGGEFEIQFPSGTYSLFFRIQLGKTSKRLGRRICNSEHIHGWDIKPVRFQLATSDNQQAVSLCYLNNNP----------GSWSHYHVGDFKVTNPDVSTGIKFSMTQIDCTHTKGGLCIDSVLILPKECAKEVIGS 289          
BLAST of rna-KK1_010194 vs. DB:Swiss
Match: P2A11_ARATH (F-box protein PP2-A11 OS=Arabidopsis thaliana OX=3702 GN=PP2A11 PE=1 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 7.001e-96
Identity = 142/275 (51.64%), Postives = 192/275 (69.82%), Query Frame = 1
Query:   43 VAPGLGDIPEGCVARVFLHLTPPEICNLARLNRSFRGAASADSVWEAKLPPNYHDLLLLMPPERHQHLSKKNIFALLSRPVPFDHGYKEVWLDRVTGRVCISISAKAMSITGIDDRRYWTWLPTEESRFNTVAYLQQIWWFEVDGEVNFPLPADIYTLSFRLHLGRFSKRLGRRVCNYEHTHGWDIKPVRFQLSTMDGQQASFECCLDENEPDDAHGNHKRGHWVDYKVGEFIVS-GSEPTTKVRFSMKQIDCTHSKGGLCVDSVFIIPSNLRER 864
            + PGLGD+PE CVA +  +L P EIC  ++LN +F GA+ AD VWE+KLPP+Y  +L  +      +L K++IF  LSR   FD G K+ W+D+ TG +C+  SAK +SITGIDDRRYW+ +P+++SRF +VAY+QQIWWF+VDGE++FP PA  Y++ FRL LG+  KR G +V + E  HGW+IKPVRFQLST DGQ +S +C L E            G+W  Y  G+F+V      +TK++FSM QIDCTH+KGGLCVDSV + PS+ ++R
Sbjct:   22 LQPGLGDLPESCVALILQNLDPVEICRFSKLNTAFHGASWADFVWESKLPPDYKLILEKILGSFPDNLRKRDIFTFLSRVNSFDEGNKKAWVDKRTGGLCLCTSAKGLSITGIDDRRYWSHIPSDDSRFASVAYVQQIWWFQVDGEIDFPFPAGTYSVYFRLQLGKPGKRFGWKVVDTEQVHGWNIKPVRFQLSTEDGQHSSSQCMLTE-----------AGNWSHYHAGDFVVGKSKSSSTKIKFSMTQIDCTHTKGGLCVDSVVVYPSSCKDR 285          
BLAST of rna-KK1_010194 vs. DB:Swiss
Match: P2A14_ARATH (F-box protein PP2-A14 OS=Arabidopsis thaliana OX=3702 GN=PP2A14 PE=1 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 3.698e-87
Identity = 131/276 (47.46%), Postives = 176/276 (63.77%), Query Frame = 1
Query:   52 GLGDIPEGCVARVFLHLTPPEICNLARLNRSFRGAASADSVWEAKLPPNYHDLLLLMPPERHQH-------LSKKNIFALLSRPVPFDHGYKEVWLDRVTGRVCISISAKAMSITGIDDRRYWTWLPTEESRFNTVAYLQQIWWFEVDGEVNFPLPADIYTLSFRLHLGRFSKRLGRRVCNYEHTHGWDIKPVRFQLSTMDGQQASFECCLDENEPDDAHGNHKRGHWVDYKVGEFIVSGSEPTTKVRFSMKQIDCTHSKGGLCVDSVFIIPSNLR 858
            GL D+PE C+  +F+++ PPEIC LAR+N+SF  A+ +D+VWE KLP NY  L+  +  ++ Q          KK I+A L RP  FD G KE WLD+ +G+V ++IS KAM ITGIDDRRYW  + ++ESRF ++ YL+QIWW E  G++ F      Y+L F++ LG+  ++ GR+ C+ +  HGWDIKPVRFQLST DGQ A  E  LDE+           G WV +  G+F+V        V+FSM QIDCTH+KGGLC+D V I P   R
Sbjct:   20 GLEDVPENCITAMFMYMEPPEICLLARVNKSFHRASRSDAVWEDKLPSNYKFLVRRILEDQQQVGVKDKLIYRKKEIYARLCRPNLFDTGTKEAWLDKRSGKVFLAISPKAMKITGIDDRRYWEHISSDESRFGSITYLRQIWWLEAVGKIRFEFAPGKYSLLFKIQLGKPIRKCGRKTCSLDQVHGWDIKPVRFQLSTSDGQCAMSERHLDES-----------GRWVYHHAGDFVVENQNSPVWVKFSMLQIDCTHTKGGLCLDCVIICPFEYR 284          
BLAST of rna-KK1_010194 vs. DB:Swiss
Match: P2B10_ARATH (F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3702 GN=PP2B10 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.432e-27
Identity = 72/269 (26.77%), Postives = 122/269 (45.35%), Query Frame = 1
Query:   67 PEGCVARVFLHLTPPEICNLARLNRSFRGAASADSVWEAKLPPNYHDLLLLMPPERHQHLSKKNIFALLSRPVPFDHGYKEVWLDRVTGRVCISISAKAMSITGIDDRRYWTWLPTEESRFNTVAYLQQIWWFEVDGEVNFPLPADIYTLSFRLHLGRFSKRLGRRVCNYEHTHGWDIKPVRFQLSTMDGQQAS-----FECCLDENEPDDAHGNHKRGHWVDYKVGEFIVSGS-EPTTKVRFSMKQIDCTHSKGGLCVDSVFIIPSNL 855
            PE C++ +     P + C  A ++++F     +D +WE  LP +Y  L+   PP R     K+  F+L + PV FD   K VWL++ +G+ C+ +SA  +SI   D+ +YW W+P  ESRF  VA L+ + WFE+ G  N         LS R     +    G   C     +G+    +   +  + GQ+ S     F   +     +      +   W++ ++GEF   G      ++  S  +    + K GL +  + I P+ +
Sbjct:   18 PEDCISYIISFTNPRDACVAATVSKTFESTVKSDIIWEKFLPADYESLI---PPSRVFSSKKELYFSLCNDPVLFDDDKKSVWLEKASGKRCLMLSAMNLSIIWGDNPQYWQWIPIPESRFEKVAKLRDVCWFEIRGRTN------TRVLSPRTRYSAYIVFKGVDKC-----YGFQNVAIEAAVGVV-GQEPSRRLICFSEAIRRGRRNVVKPKQREDGWMEIELGEFFNDGGIMDNDEIEMSALETKQLNRKCGLIIQGIEIRPAKI 271          
BLAST of rna-KK1_010194 vs. DB:Swiss
Match: PP2B8_ARATH (Putative F-box protein PP2-B8 OS=Arabidopsis thaliana OX=3702 GN=PP2B8 PE=4 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.971e-26
Identity = 80/281 (28.47%), Postives = 133/281 (47.33%), Query Frame = 1
Query:   55 LGDIPEGCVARVFLHLTPPEICNLARLNRSFRGAASADSVWEAKLPPNYHDLLLLMPPERHQHLSKKNI-FALLSRPVPFDHGYKEVWLDRVTGRVCISISAKAMSITGIDDRRYWTWLPTEESRFNTVAYLQQIWWFEVDGEVNFPLPADIYTLSFRLHLGRFSKRLGRRVC-NYEHTHGWDIKPVRFQ-LSTMDGQQASFECCLDENEPDDAHGNH------KRGHWVDYKVGEFIVSG----SEPTTKVRFSMKQIDCTHSKGGLCVDSVFIIPSNLR 858
            L D+PE CV+ +    +P + C LA ++++F  A  +D VWE  +PP Y  L+        + LSKK + FAL  + V  D G K +W+++   + CI ISA  ++I   +  + W W+P  ++RF TVA L ++  FE+ G +N    + + +   R       K+L   +C  +E+     +  V  Q L     +   F+  +DE       G +      ++  W++ K+GEF   G     +    V    KQ    H K GL +  + I P+N+R
Sbjct:   36 LDDLPEECVSIIVSFTSPQDACVLASVSKTFASAVKSDIVWEKFIPPEYESLI--SQSRAFKFLSKKELYFALCDKSVLIDDGKKSLWIEKANAKRCIMISAMNLAIAWGNSPQSWRWIPDPQARFETVAELLEVCLFEIRGRIN----SRVISPKTRYSAYIVYKKLN--ICYGFENVAVEVVVGVVGQDLEESCRRYICFDETMDEQFRRRDRGKNLVKPERRKDGWMEIKIGEFFNEGGLLNDDEIEMVALEAKQ---RHWKRGLIIQGIEIRPTNIR 305          
BLAST of rna-KK1_010194 vs. DB:Swiss
Match: PP2B1_ARATH (F-box protein PP2-B1 OS=Arabidopsis thaliana OX=3702 GN=PP2B1 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.202e-26
Identity = 52/142 (36.62%), Postives = 84/142 (59.15%), Query Frame = 1
Query:   64 IPEGCVARVFLHLTPPEICNLARLNRSFRGAASADSVWEAKLPPNYHDLLLLMPPERHQHLSKKNIF-ALLSRPVPFDHGYKEVWLDRVTGRVCISISAKAMSITGIDDRRYWTWLPTEESRFNTVAYLQQIWWFEVDGEVN 486
            +PE C+++V  H +P + C +A +++S + AA +D VWE  LP  Y  L+L    +   HLSKK IF +L    V  ++G K  W+++ +G+ C  +SA  ++I   D   YW W+   ES+F  VA L+ + WFEV G+++
Sbjct:   35 LPEDCISKVISHTSPRDACVVASVSKSVKSAAQSDLVWEMFLPSEYSSLVL----QSANHLSKKEIFLSLADNSVLVENGKKSFWVEKASGKKCYMLSAMELTIIWGDSPAYWKWITVPESKFEKVAELRNVCWFEVRGKIS 172          
BLAST of rna-KK1_010194 vs. DB:Swiss
Match: FB95_ARATH (F-box protein At2g02240 OS=Arabidopsis thaliana OX=3702 GN=At2g02240 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.857e-25
Identity = 77/283 (27.21%), Postives = 127/283 (44.88%), Query Frame = 1
Query:   43 VAPGLGD---IPEGCVARVFLHLTPPEICNLARLNRSFRGAASADSVWEAKLPPNYHDLLLLMPPERHQHLSKKNI-FALLSRPVPFDHGYKEVWLDRVTGRVCISISAKAMSITGIDDRRYWTWLPTEESRFNTVAYLQQIWWFEVDGEVNFPL--PADIYT--LSFRLH-----LGRFSKRLGRRVCNYEHTHGWDIKPVRFQLSTMDGQQASFECCLDENEPDDAHGNHKRGHWVDYKVGEFIVSGSEPTTKVRFSMKQIDCTHSKGGLCVDSVFIIPSN 852
            V+PG      +PE C++ +    +P + C  A ++++F  A S+D VW+  LPP Y  L+           SKK + FAL   PV  + G K  WL++ +G+ CI +S+K + IT      YW W+   ESRFN +A L  + WFE+ G+ +  +  P   Y+  + F+       LG     +G  +   E +        RF        +       D  +PD      +   W++ ++GEF     E   ++ FS+ +I     K GL +  +   P+ 
Sbjct:   54 VSPGTSPFDVLPEDCISNIISFTSPRDACVAASVSKTFESAVSSDCVWDKFLPPEYESLV----SRSRVFASKKELYFALCHNPVLIEDGKKSFWLEKASGKRCIMLSSKELWITWGSSPEYWQWISIPESRFNKIAELLDVCWFEIRGKTSARVLSPGTRYSAYIVFKTKDRCPGLGHLPVEVGLGLVGQESSK-------RFIYFIGPRDRRGRRETRDVTKPD-----QREDGWMEAELGEFF--NEERCDEIEFSVIEIKSPSWKSGLIIQGIEFRPTK 318          
BLAST of rna-KK1_010194 vs. DB:Swiss
Match: P2B15_ARATH (F-box protein PP2-B15 OS=Arabidopsis thaliana OX=3702 GN=PP2B15 PE=2 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 9.446e-24
Identity = 73/297 (24.58%), Postives = 134/297 (45.12%), Query Frame = 1
Query:   64 IPEGCVARVFLHLTPPEICNLARLNRSFRGAASADSVWEAKLPPNYHDLLLLMPPERHQHLSKKNIFALLSRPVPFDHGYKEVWLDRVTGRVCISISAKAMSITGIDDRRYWTWLPTEESRFNTVAYLQQIWWFEVDGEVNFPLPADIYTLSFRLHLGRFSKRLGRRVCNYEHTHGWDIKPVRFQLSTMDGQ---QASFECCLDENEP----------DDAHGNHK--RGH----------WVDYKVGEFIVSGSE--PTTKVRFSMKQIDCTHSKGGLCVDSVFIIPSNLRERTGS 873
            +PE CVA +    TP +  + A ++  FR A  +D VWE  LP +Y  ++           SKK ++  L   +  D+G K   +++++G++   +S++ +SIT  D R YW+W P  +SRF+    L    W E+ G++          LS   + G +   L  +V +    +G D+ P    +   +G+   ++++  CLD  +           +     H+  R H          W++ ++GEF     E     +V  S+ ++     KGG+ +D + + P  L+ R G+
Sbjct:    3 LPEACVATILSFTTPADTISSAAVSSVFRVAGDSDFVWEKFLPTDYCHVISRSTDPHRIFSSKKELYRCLCESILIDNGRKIFKIEKLSGKISYILSSRDLSITWSDQRHYWSWSPRSDSRFSEGVQLIMTDWLEIIGKIQTG------ALSPNTNYGAY---LIMKVTS--RAYGLDLVPAETSIKVGNGEKKIKSTYLSCLDNKKQQMERVFYGQREQRMATHEVVRSHRREPEVRDDGWMEIELGEFETGSGEGDDDKEVVMSLTEVKGYQLKGGIAIDGIEVRPKPLKVRAGT 288          
The following BLAST results are available for this feature:
BLAST of rna-KK1_010194 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: C. cajan Asha genome v1.0 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
P2A15_ARATH1.397e-15174.25F-box protein PP2-A15 OS=Arabidopsis thaliana OX=3... [more]
P2A12_ARATH6.633e-10754.91F-box protein PP2-A12 OS=Arabidopsis thaliana OX=3... [more]
P2A13_ARATH2.430e-10455.27F-box protein PP2-A13 OS=Arabidopsis thaliana OX=3... [more]
P2A11_ARATH7.001e-9651.64F-box protein PP2-A11 OS=Arabidopsis thaliana OX=3... [more]
P2A14_ARATH3.698e-8747.46F-box protein PP2-A14 OS=Arabidopsis thaliana OX=3... [more]
P2B10_ARATH1.432e-2726.77F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3... [more]
PP2B8_ARATH1.971e-2628.47Putative F-box protein PP2-B8 OS=Arabidopsis thali... [more]
PP2B1_ARATH5.202e-2636.62F-box protein PP2-B1 OS=Arabidopsis thaliana OX=37... [more]
FB95_ARATH1.857e-2527.21F-box protein At2g02240 OS=Arabidopsis thaliana OX... [more]
P2B15_ARATH9.446e-2424.58F-box protein PP2-B15 OS=Arabidopsis thaliana OX=3... [more]
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InterPro
Analysis Name: Cajanus cajan Asha genome v1.0
Date Performed: 2019-09-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025886Phloem protein 2-likePFAMPF14299PP2coord: 113..282
e-value: 3.9E-41
score: 140.5
IPR001810F-box domainPROSITEPS50181FBOXcoord: 16..62
score: 9.259
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 17..88

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-KK1_010194_Cc_Asha_v1.0 ID=rna-KK1_010194_Cc_Asha_v1.0; Name=rna-KK1_010194; organism=Cajanus cajan; type=mRNA; length=891bp
ATGGGGGCCTCGCTGTCCAACCTTGGAAGCAACGGTTCCGCCGTCGCTCC
GGGCCTCGGCGATATCCCGGAGGGTTGCGTCGCTCGCGTCTTCCTCCACC
TCACTCCGCCGGAGATATGTAACCTCGCGCGCCTCAACCGCTCCTTCCGC
GGCGCCGCCTCCGCCGACTCCGTCTGGGAAGCCAAGCTGCCTCCCAACTA
CCACGATCTCCTCCTTCTCATGCCTCCCGAGAGGCACCAACATCTCTCCA
AGAAGAACATCTTCGCTCTCCTCTCTCGCCCTGTGCCGTTTGATCACGGC
TACAAGGAAGTGTGGCTCGATAGGGTTACCGGTAGGGTTTGCATCTCCAT
TTCGGCCAAGGCCATGTCTATTACGGGAATTGATGACCGCCGATACTGGA
CTTGGCTTCCTACTGAAGAATCTAGGTTCAACACTGTAGCATATTTGCAG
CAAATATGGTGGTTTGAAGTGGATGGGGAGGTCAACTTCCCATTACCTGC
TGATATTTATACTCTCTCCTTTAGGCTTCACCTTGGGCGATTTTCCAAGA
GGCTTGGTCGACGTGTGTGCAATTATGAGCACACCCATGGTTGGGATATA
AAACCAGTGAGATTTCAGCTGTCAACCATGGATGGTCAGCAAGCATCATT
TGAGTGCTGCCTGGATGAAAATGAACCTGATGATGCACATGGCAATCATA
AGCGCGGACATTGGGTAGATTACAAGGTGGGTGAGTTTATTGTCAGTGGA
TCAGAACCTACGACTAAAGTAAGATTCTCCATGAAACAGATTGATTGTAC
ACACTCTAAAGGTGGGCTCTGTGTAGATTCTGTATTTATTATACCTAGTA
ATTTGAGGGAGCGCACGGGAAGTGTTGGCATTATGAAATAA
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protein sequence of rna-KK1_010194_Cc_Asha_v1.0

>rna-KK1_010194_Cc_Asha_v1.0 ID=rna-KK1_010194_Cc_Asha_v1.0; Name=rna-KK1_010194_Cc_Asha_v1.0; organism=Cajanus cajan; type=polypeptide; length=296bp
MGASLSNLGSNGSAVAPGLGDIPEGCVARVFLHLTPPEICNLARLNRSFR
GAASADSVWEAKLPPNYHDLLLLMPPERHQHLSKKNIFALLSRPVPFDHG
YKEVWLDRVTGRVCISISAKAMSITGIDDRRYWTWLPTEESRFNTVAYLQ
QIWWFEVDGEVNFPLPADIYTLSFRLHLGRFSKRLGRRVCNYEHTHGWDI
KPVRFQLSTMDGQQASFECCLDENEPDDAHGNHKRGHWVDYKVGEFIVSG
SEPTTKVRFSMKQIDCTHSKGGLCVDSVFIIPSNLRERTGSVGIMK
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mRNA from alignment at Chr_3-CM003605.1:19326477..19330437+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-KK1_010194_Cc_Asha_v1.0 ID=rna-KK1_010194_Cc_Asha_v1.0; Name=rna-KK1_010194; organism=Cajanus cajan; type=mRNA; length=3961bp; location=Sequence derived from: Chr_3-CM003605.1:19326477..19330437+ (Cajanus cajan
ATGGGGGCCTCGCTGTCCAACCTTGGAAGCAACGGTTCCGCCGTCGCTCC GGGCCTCGGCGATATCCCGGAGGGTTGCGTCGCTCGCGTCTTCCTCCACC TCACTCCGCCGGAGATATGTAACCTCGCGCGCCTCAACCGCTCCTTCCGC GGCGCCGCCTCCGCCGACTCCGTCTGGGAAGCCAAGCTGCCTCCCAACTA CCACGATCTCCTCCTTCTCATGCCTCCCGAGAGGCACCAACATCTCTCCA AGAAGAACATCTTCGCTCTCCTCTCTCGCCCTGTGCCGTTTGATCACGGC TACAAGGTACGCTACGCTAcgccctctctctctctctctctctctctctc agttCATGAATCCATATCGATGTACCTTTTGCAGGAAGTGTGGCTCGATA GGGTTACCGGTAGGGTTTGCATCTCCATTTCGGCCAAGGCCATGTCTATT ACGGGAATTGATGACCGCCGATACTGGACTTGGCTTCCTACTGAAGAATC TAGGTTAGCCTTTCACAACCTCTATTTTACTTTCTATCTTGTGTTGTCAC TGCATCTTTCTTTTCGTTCAGAACTTAGGGTTTGCTAATTTTAGAGGTTC CTGTTTTAGAAACCCAATCTATGCTACATGCTTCCGTATTCTTAAGGATG GCGAATGTTTTAGTTTGTGCTTCGTTGCTGGTCTAGGTTATCACAGAAAG GAAAGGATTGACCATAATGTAATGCGGGGAGTTTTGGCGAGTGGGAAGAA AGGTGCTAAGTGCTGCACATGTTCACAGAATGCTCttagattcatttttt tttttgcttccaATTGTGTGTTTGTTTGGTTGCTGTAATGTTTTTACATG CCACTTTATCAAGTGTATAATGCAGGTGGCCTTGTAGAGAGTGCCGAACG TTACTTGAAAGTTAAGATGTGTTTTGGTATCACGAAAAACAATGATAAGA TCATTATTTTGGTTTTCCAAGATTACTTAATGGATGTGCCGATGTGGTAA TTGGGTGCTAGAAGGTGTTCAACAGGTTTACCATTTTAAGTGATCCTTAG ATCAACTATGTATGCTTTTGCAACATGTGGAGAAAGGGAAATAATAAGGA ACAGAAACTTTCCTTCCTTTGAGGAAAAGAAGGAAAGTCGGTGTTTTGTA TTCAGTTTTTATGGAAGTCTTCAGCAGCTTACATATTCATAGATCCTGAT GTTTTCCTTTTCAAGTCATATTAATTGGCTTTAAAAGTAAAGTTTCTTGC AATTGCTGGGACTTTACTTCCTAAACCATGCTCTGGGAAACACCCCCTTT GATTAATTTAAAGGATATGCGCTTTTCAGTGTCCTTTTAAAATGATTGTG GAAGGATAAATCTATCAAACTTTCTAAGTATTCCCAGATATGGCTTTTCT TCCAATCAAGTGAAAATCTTCTTTTCTTATCTTATTAGTATATTGACTAG GAACTGTAGATGATCATCAAGGAGGCTAACATACCAAGGTTATTGCaatt catgtaaaataaaacaatcaatTTATAGTATATTGACTAAGTTGCTGTCT GAAAATGTCCATGTTGCTTGTGTTGGCTtactaaattttcattttagttc aCATATGAAAGTTACTTCTTTTATATGGTCTAGACACTAGAGCTTGAATA TCAATTGCTTGtactctctctctcacacacatatatattgacAAAACCTT GTCTTAAATGAATTTCACAAGCCTCTTATATGTTGGAGTGATGTTGTTAT ACATCTTGTTCTGCTGGAGCTTGCATGGATGAAATCTTGAAAAGCTTTTG TCTAGATTCAGTACTCAATGCGATTTAAATTTTGACTTCCAAACTGCCTA TTTGTTAAATATGCCAGAATTATCAATCTAAGATTCAACTATATCCAAAT TCTGTTAATCTAACATCAAGTGTTTAATTTGTGCACATGATTTACGAAAC AGTTATCTGATTGGCTTGTCTAGTATGCTTTGATTGCTTTATGCTTGTCT TTTTGAGAAAGTGGAACTGTAAACATTTTGCTTTCATTGTCTGTGTCCTG CCTGACCATTCTTCTAGTTTTTGAATGatgattttgttttcatttatgag cttgtttattttgtattgattGGCTTAACTTTCTTGATGCCCTGTGGCCT TTGCTGTCCAATACCACTTTTAAAAGTTGCAAGCTTTATTTGTAATGGGG ATGTTTAATTGTTGGGTGCtgcttttttcaaatttaaatttaatttaaat atgtacacAATTCCAAGAATTTCATGAAACTTCTAATTGGATCAAATACT CAATCCCAGGGGAAAAGCTGGCCCCATCCAAGCCAAATGACCCAATGAAT TCAAATGAGTTACTTGGTTTGTTCTTTTATTTGGCCCAAATGTTATGTAT AGCTCACTATGGTATTAAGTATGGACTATTTGGCTGCCCTTTTATTATAT TGTCCTGTACAGGCAGACTGCAAATGCATCCTAAGCTAAATTCTAACATT CTTCCACCCAGAAAAGCAAATTATCTTggtccaatatatatatatatata tatatatatataaggcaGGGCTTTATTCGAAACCATTTTGATATTTGGAC ATTAAACTTCTCTACTTACATGTACATGCATTAATGTGAATGAAGGATAT GAATTtgctattttaattattgggtAAATTATGCTTCTCAGGAGATGCTT AAATTACACTATTTTCAcctctaatttaaaaattacatccAATCCCTTAA AAGAGGAAATTTATTACACTTCAGTCTATTTTAATGTGAACAAACCTTTT AGTGATGGTGAACAACTATGAACAAACCTCCTTTATCTCTTCTCTTCAAA TTTTAGTGTCACCAGAGTCAATTTTCAACACCATTATCAATTTTACATGC TAGAGAATGAAATGAAGTTGTAAATACTCTTACTATTGTTTTGAAACTTA ACCCAAAAATACCATTTTCTTAGGTGTCAAATTTGATGGTAAAGAATTCA AAACTACTTGTTAATTATGTTGAGTTATATAGAGGCGGAAAAAACTTCTC TTTAAAGgcttgtttatattaaaatagactAAATATAACACATTAGTTTC TTAGAGGAGAGGAGTGTGATTCACCCTTAATTATTTGTGCCTTGGAATGA TGTTTTGACTTTCAATTATATATGCAATTTGGTTCAGTTTAGATTATCTC ATCTGTATCTTTTAGCCCTGCTGATCTATGAACTACTCAGCCTGATTCAG CCAAACTGTCCTATTCTatgaataaaacataaacaGGTTGTTTTTGTTGG TTTGCATAATCtagtattaatttttgaatagtTTGACAGCTCTAATTCTC AATGTCTTTCCATGCGTATATAGTTAAATTATGCCAACTTTCTGTTTATA TGCTATTTCTGCTAATTGTGCCAAAACTGTTTTGTTTAATATTGAGCTCT TTTTTCTGAGGATTGCGTTGCAATGGtgttttttgttcatttcaggTTCA ACACTGTAGCATATTTGCAGCAAATATGGTGGTTTGAAGTGGATGGGGAG GTCAACTTCCCATTACCTGCTGATATTTATACTCTCTCCTTTAGGCTTCA CCTTGGGCGATTTTCCAAGAGGCTTGGTCGACGTGTGTGCAATTATGAGC ACACCCATGGTTGGGATATAAAACCAGTGAGATTTCAGCTGTCAACCATG GATGGTCAGCAAGCATCATTTGAGTGCTGCCTGGATGAAAATGAACCTGA TGATGCACATGGCAATCATAAGCGCGGACATTGGGTAGATTACAAGGTGG GTGAGTTTATTGTCAGTGGATCAGAACCTACGACTAAAGTAAGATTCTCC ATGAAACAGATTGATTGTACACACTCTAAAGGTGGGCTCTGTGTAGATTC TGTATTTATTATACCTAGTAATTTGAGGGAGCGCACGGGAAGTGTTGGCA TTATGAAATAA
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Coding sequence (CDS) from alignment at Chr_3-CM003605.1:19326477..19330437+

>rna-KK1_010194_Cc_Asha_v1.0 ID=rna-KK1_010194_Cc_Asha_v1.0; Name=rna-KK1_010194; organism=Cajanus cajan; type=CDS; length=1782bp; location=Sequence derived from: Chr_3-CM003605.1:19326477..19330437+ (Cajanus cajan
ATGGGGGCCTCGCTGTCCAACCTTGGAAGCAACGGTTCCGCCGTCGCTCC
GGGCCTCGGCGATATCCCGGAGGGTTGCGTCGCTCGCGTCTTCCTCCACC
TCACTCCGCCGGAGATATGTAACCTCGCGCGCCTCAACCGCTCCTTCCGC
GGCGCCGCCTCCGCCGACTCCGTCTGGGAAGCCAAGCTGCCTCCCAACTA
CCACGATCTCCTCCTTCTCATGCCTCCCGAGAGGCACCAACATCTCTCCA
AGAAGAACATCTTCGCTCTCCTCTCTCGCCCTGTGCCGTTTGATCACGGC
TACAAGATGGGGGCCTCGCTGTCCAACCTTGGAAGCAACGGTTCCGCCGT
CGCTCCGGGCCTCGGCGATATCCCGGAGGGTTGCGTCGCTCGCGTCTTCC
TCCACCTCACTCCGCCGGAGATATGTAACCTCGCGCGCCTCAACCGCTCC
TTCCGCGGCGCCGCCTCCGCCGACTCCGTCTGGGAAGCCAAGCTGCCTCC
CAACTACCACGATCTCCTCCTTCTCATGCCTCCCGAGAGGCACCAACATC
TCTCCAAGAAGAACATCTTCGCTCTCCTCTCTCGCCCTGTGCCGTTTGAT
CACGGCTACAAGGAAGTGTGGCTCGATAGGGTTACCGGTAGGGTTTGCAT
CTCCATTTCGGCCAAGGCCATGTCTATTACGGGAATTGATGACCGCCGAT
ACTGGACTTGGCTTCCTACTGAAGAATCTAGGAAGTGTGGCTCGATAGGG
TTACCGGTAGGGTTTGCATCTCCATTTCGGCCAAGGCCATGTCTATTACG
GGAATTGATGACCGCCGATACTGGACTTGGCTTCCTACTGAAGAATCTAG
gTTCAACACTGTAGCATATTTGCAGCAAATATGGTGGTTTGAAGTGGATG
GGGAGGTCAACTTCCCATTACCTGCTGATATTTATACTCTCTCCTTTAGG
CTTCACCTTGGGCGATTTTCCAAGAGGCTTGGTCGACGTGTGTGCAATTA
TGAGCACACCCATGGTTGGGATATAAAACCAGTGAGATTTCAGCTGTCAA
CCATGGATGGTCAGCAAGCATCATTTGAGTGCTGCCTGGATGAAAATGAA
CCTGATGATGCACATGGCAATCATAAGCGCGGACATTGGGTAGATTACAA
GGTGGGTGAGTTTATTGTCAGTGGATCAGAACCTACGACTAAAGTAAGAT
TCTCCATGAAACAGATTGATTGTACACACTCTAAAGGTGGGCTCTGTGTA
GATTCTGTATTTATTATACCTAGTAATTTGAGGGAGCGCACGGGAAGTGT
TGGCATTATGAAATAAgTTCAACACTGTAGCATATTTGCAGCAAATATGG
TGGTTTGAAGTGGATGGGGAGGTCAACTTCCCATTACCTGCTGATATTTA
TACTCTCTCCTTTAGGCTTCACCTTGGGCGATTTTCCAAGAGGCTTGGTC
GACGTGTGTGCAATTATGAGCACACCCATGGTTGGGATATAAAACCAGTG
AGATTTCAGCTGTCAACCATGGATGGTCAGCAAGCATCATTTGAGTGCTG
CCTGGATGAAAATGAACCTGATGATGCACATGGCAATCATAAGCGCGGAC
ATTGGGTAGATTACAAGGTGGGTGAGTTTATTGTCAGTGGATCAGAACCT
ACGACTAAAGTAAGATTCTCCATGAAACAGATTGATTGTACACACTCTAA
AGGTGGGCTCTGTGTAGATTCTGTATTTATTATACCTAGTAATTTGAGGG
AGCGCACGGGAAGTGTTGGCATTATGAAATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR025886PP2-like
IPR001810F-box_dom
IPR036047F-box-like_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding