rna-KK1_011056

Transcript Overview
Namerna-KK1_011056
Unique Namerna-KK1_011056_Cc_Asha_v1.0
TypemRNA
OrganismCajanus cajan (pigeon pea)
Sequence length2373
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_3-CM003605.1supercontigChr_3-CM003605.1:27220916..27223288 +Cajanus cajan Asha genome v1.0n/a
Chr_3-CM003605.1supercontigChr_3-CM003605.1:27220916..27223288 +Cajanus cajan Asha genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Cajanus cajan Asha genome v1.02019-09-17
BLAST: C. cajan Asha genome v1.0 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
cccrR0694Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
cccrR0699Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
cccrR0728Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ccccL174Cajanus cajan Asha genome v1.0Cajanus cajan
ccccL179Cajanus cajan Asha genome v1.0Cajanus cajan
caiccL0292Cicer arietinum ICC 4958 genome v2Cicer arietinum
caiccL0310Cicer arietinum ICC 4958 genome v2Cicer arietinum
caiccL0469Cicer arietinum ICC 4958 genome v2Cicer arietinum
ccpvR0913Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccpvR0930Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caccL0325Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caccL0336Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caccL0507Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
anccL0891Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccL1095Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccL1108Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccL1435Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asccL0450Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asccL0454Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cctifR0779Vicia faba cv. Tiffany genome v1.0Vicia faba
cctifR0784Vicia faba cv. Tiffany genome v1.0Vicia faba
ccvfhR0794Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccvfhR0803Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccvrvR0813Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccvuaR0818Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
ccvuaR0822Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
ccvssR0854Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccvssR0904Vicia sativa cv. Studenica genome v1.0Vicia sativa
canccL0322Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canccL0502Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjccL0238Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjccL0241Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carccL0342Cicer arietinum
carccL0352Cicer arietinum
carccL0542Cicer arietinum
ccccaR0953Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccccaR0981Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccccaR0986Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccvumR0894Vigna umbellata FF25 genome v1.0Vigna umbellata
ccvumR0974Vigna umbellata FF25 genome v1.0Vigna umbellata
ccvumR0981Vigna umbellata FF25 genome v1.0Vigna umbellata

Orthologs
Gene/TranscriptAssemblySpecies
Vum_05G01110.1Vigna umbellata FF25 genome v1.0Vigna umbellata
evm.model.Chr07.1263.1.62122c05Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
rna-XM_014659160.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-TanjilR_31701Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
evm.model.Chr06.1251Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Ca_08517.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
LR48_mrnaVigan10g154500Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Cr_10142.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Vum_08G01285.1Vigna umbellata FF25 genome v1.0Vigna umbellata
jg3093.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Ca_03766Cicer arietinum CDC Frontier genome v1.0Cicer arietinum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-KK1_007169Cajanus cajan Asha genome v1.0Cajanus cajan
Cc_v2.0_08442.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Cc_v2.0_04047.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-KK1_011056gene-KK1_011056_Cc_Asha_v1.0Cajanus cajangene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-KK1_011056rna-KK1_011056_Cc_Asha_v1.0-proteinCajanus cajanpolypeptide
rna-KK1_011056_Cc_Asha_v1.0rna-KK1_011056_Cc_Asha_v1.0Cajanus cajanpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-KK1_011056_Cc_Asha_v1.0-exon-Chr_3-CM003605.1_Cc_Asha_v1.0-1571082112:27220916..27223288rna-KK1_011056_Cc_Asha_v1.0-exon-Chr_3-CM003605.1_Cc_Asha_v1.0-1571082112:27220916..27223288Cajanus cajanexon
rna-KK1_011056_Cc_Asha_v1.0-exon-Chr_3-CM003605.1_Cc_Asha_v1.0-1571847872:27220916..27223288rna-KK1_011056_Cc_Asha_v1.0-exon-Chr_3-CM003605.1_Cc_Asha_v1.0-1571847872:27220916..27223288Cajanus cajanexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-KK1_011056_Cc_Asha_v1.0-CDS-Chr_3-CM003605.1_Cc_Asha_v1.0-1571082112:27220916..27223288rna-KK1_011056_Cc_Asha_v1.0-CDS-Chr_3-CM003605.1_Cc_Asha_v1.0-1571082112:27220916..27223288Cajanus cajanCDS
rna-KK1_011056_Cc_Asha_v1.0-CDS-Chr_3-CM003605.1_Cc_Asha_v1.0-1571847872:27220916..27223288rna-KK1_011056_Cc_Asha_v1.0-CDS-Chr_3-CM003605.1_Cc_Asha_v1.0-1571847872:27220916..27223288Cajanus cajanCDS


Homology
The following BLAST results are available for this feature:
BLAST of rna-KK1_011056 vs.
Analysis Date: 2019-10-17 (BLAST: C. cajan Asha genome v1.0 vs. Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: Cajanus cajan Asha genome v1.0
Date Performed: 2019-09-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006564Zinc finger, PMZ-typeSMARTSM0057526again6coord: 657..684
e-value: 3.8E-8
score: 43.1
IPR004332Transposase, MuDR, plantPFAMPF03108DBD_Tnp_Mutcoord: 206..270
e-value: 6.2E-26
score: 90.2
IPR007527Zinc finger, SWIM-typePFAMPF04434SWIMcoord: 652..680
e-value: 6.0E-7
score: 29.0
IPR007527Zinc finger, SWIM-typePROSITEPS50966ZF_SWIMcoord: 650..682
score: 9.73
IPR018289MULE transposase domainPFAMPF10551MULEcoord: 402..497
e-value: 6.5E-17
score: 61.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 744..763

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-KK1_011056_Cc_Asha_v1.0 ID=rna-KK1_011056_Cc_Asha_v1.0; Name=rna-KK1_011056; organism=Cajanus cajan; type=mRNA; length=2373bp
ATGGCTAACCATGATTTGATACTTGGCCAAAGTCATAAATTAGCACTTGG
CCATGACCAGCAACTGATGCTGAGCCATAATCATAGTTTGGGCCTCAGTG
AGAATCATGATTTGGAATTGGGACAAACTGGTGATCAACATTTAGGTCTT
GGTCAAACTGATCAACATTTGGGTTTGGGACAAACTGATCAACATTTGGG
CCTGGAACAAACTGATCAACATTTGGGTATGGGACAAACTCATGATCATG
AACTGTGCTTAGGAGATGCCCATGACCATGAATTGGGTTTAGGACTGAAC
CATGATGATGAAGGAGATGCTGTTCACACTTATGGGCATGAGAATGAGTT
AGCCGTGGTGGATCAAAAACCTGATCTTGATGACCATGAGATGCCCATTC
CCACACAAAATCATGAGTTGGCCATACCGGAGAACAATGATTTGTCTGTT
TCAGAAAGCCAGGAATTTGATGAGAACATGGCTTTGACTGTGATCCATAA
TCCAGATATGAGTATTGATTCTGCTGATGATGATATGGGTGTTCATGAAT
CCCAGCTTATGGTTACCACACCCCTTGTAATTCAGGCTCGTACATCAGCT
ATAAGTCCTAGTTATGAATTGTCAGTGGGACAAGAATTCCCTGATGTTAA
AAGTTGCCGGAGGGCATTGAGGGATACAGCAATCGCTCTGCACTTTGAGA
TACAGACTATAAAATCTGACAAGACCCGCTTTACTGCTAAATGCCGAAGT
GATGGATGTCCTTGGCGAATTCATGCGGCAAAGCTCCCTGGGGTCCCAAC
TTTTACTATTAGGACAATCCATGAGAGTCATACATGTGGAGGAATTTCGC
ATCTTGGCCATCAGCAAGCCTCAGTTCAATGGGTTGCTAGCTCTGTGGAG
CAAAGGCTAAGGGAGAACCCTAATTGCAAGCCAAAGGAGATACTGGAAGA
GATTCATAGGGTTCATGGCATCACTTTGTCATACAAGCAAGCATGGAGAG
GCAAGGAGCGCATCATGGCTGCAATGCGTGGATCTTTTGAAGAGGGATAT
CGCTTACTTCCACAGTACTGTGAACAGCTGAAACGCACAAACCCAGGCAG
TATCGCATCTGTTTATGGAAACCCAACTGATAATTGCTTCCAACGCCTCT
TCATATCCTTTCAAGCATCAATATATGGTTTTTTAAATGCCTGTCGACCA
CTTTTGGAGCTTGATAGGGTGTATTTAAAGAGCAAGTATCTTGGTACATT
ACTTCTTGCTACTGCATTTGATGGTGATGGGGCTCTCTTTCCTTTGGCAT
TTGGTGTTGTTGATGAGGAGAATGATGATAATTGGATGTGGTTTCTGTCT
GAACTTCGTAACCTGCTGGAGATTAACACTGAAAACATGCCAAGGCTTAC
AATTTTGTCTGACAGGCAGAAGGGAATTGTAGATGGTGTGGACACAAATT
TTCCTACTGCTTTCCATGGATTTTGTATGCGTCACTTGAGTGACAGCTTC
CGCAAGGAGTTTAACAACACGATGCTTGTTAGTCTTCTGTGGGAAGCAGC
TCAAGTTCTTACTATACTTGAATTCGAAGCAAAAATTTTAGAGATTGAAG
AAATATCACATGCTGCTGCATATTGGCTTCGAAGTATTCCACCTCATTTG
TGGGCTACTGCATATTTTGAGGGGCAAAGTTTCGCCAATTTGACGGCTAA
CATAGTTGAATCTTTAAACACATGGATATTAGATGCATCTGGGCTTCCAA
TAATTCAAATGATGGAATGCATTAGAAGGCAGCTGATGACATGGTTTAAC
GAGCGGCGAGAGACGAGTATGCAGTGGACATCAATACTTGTACCTTCTGC
TGAGAGACATGTTGCAGAGGCTCTTGACCGTGCACGAACACACCAGGTAC
TTCGTGCCACTGACGCAGAATTTGAAGTTATATCTCACGAAGGAACAAAT
ACTGTTGACATTAGGACGCGTTGCTGTCATTGTCGCGGGTGGCAGCTCTA
TGGTTTGCCTTGTGCACATGCTGTGGCTGCACTTCTGTCTATTAGGCAGA
ATGTGCATAGATTCACAGAGAGCTGTTTTACTGTTGCAACGTATAGGAAG
ACGTACTCACAGACCATTCATCCAATTCCTGATAAGTCTCTGTGGAAGGA
GTTATCTGAGCCTGAAGGGGATGTCAATGCTATTGCTTCCCAATCTGATC
AACAACTTCAACTTCAACTTATTATTAACCCTCCTAAATCACTCAGGCCA
CCGGGACGGCCCAGAAAGAAACGGGTTCGGGCAGAAGACCGTGGCCGTAT
AAAACGGGTCGTTCATTGTAGTCGTTGCAATCAAACAGGACACTTTAGAA
CCACCTGTGCAGCCCCCATCTAA
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protein sequence of rna-KK1_011056_Cc_Asha_v1.0

>rna-KK1_011056_Cc_Asha_v1.0 ID=rna-KK1_011056_Cc_Asha_v1.0; Name=rna-KK1_011056_Cc_Asha_v1.0; organism=Cajanus cajan; type=polypeptide; length=790bp
MANHDLILGQSHKLALGHDQQLMLSHNHSLGLSENHDLELGQTGDQHLGL
GQTDQHLGLGQTDQHLGLEQTDQHLGMGQTHDHELCLGDAHDHELGLGLN
HDDEGDAVHTYGHENELAVVDQKPDLDDHEMPIPTQNHELAIPENNDLSV
SESQEFDENMALTVIHNPDMSIDSADDDMGVHESQLMVTTPLVIQARTSA
ISPSYELSVGQEFPDVKSCRRALRDTAIALHFEIQTIKSDKTRFTAKCRS
DGCPWRIHAAKLPGVPTFTIRTIHESHTCGGISHLGHQQASVQWVASSVE
QRLRENPNCKPKEILEEIHRVHGITLSYKQAWRGKERIMAAMRGSFEEGY
RLLPQYCEQLKRTNPGSIASVYGNPTDNCFQRLFISFQASIYGFLNACRP
LLELDRVYLKSKYLGTLLLATAFDGDGALFPLAFGVVDEENDDNWMWFLS
ELRNLLEINTENMPRLTILSDRQKGIVDGVDTNFPTAFHGFCMRHLSDSF
RKEFNNTMLVSLLWEAAQVLTILEFEAKILEIEEISHAAAYWLRSIPPHL
WATAYFEGQSFANLTANIVESLNTWILDASGLPIIQMMECIRRQLMTWFN
ERRETSMQWTSILVPSAERHVAEALDRARTHQVLRATDAEFEVISHEGTN
TVDIRTRCCHCRGWQLYGLPCAHAVAALLSIRQNVHRFTESCFTVATYRK
TYSQTIHPIPDKSLWKELSEPEGDVNAIASQSDQQLQLQLIINPPKSLRP
PGRPRKKRVRAEDRGRIKRVVHCSRCNQTGHFRTTCAAPI
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mRNA from alignment at Chr_3-CM003605.1:27220916..27223288+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-KK1_011056_Cc_Asha_v1.0 ID=rna-KK1_011056_Cc_Asha_v1.0; Name=rna-KK1_011056; organism=Cajanus cajan; type=mRNA; length=2373bp; location=Sequence derived from: Chr_3-CM003605.1:27220916..27223288+ (Cajanus cajan
ATGGCTAACCATGATTTGATACTTGGCCAAAGTCATAAATTAGCACTTGG
CCATGACCAGCAACTGATGCTGAGCCATAATCATAGTTTGGGCCTCAGTG
AGAATCATGATTTGGAATTGGGACAAACTGGTGATCAACATTTAGGTCTT
GGTCAAACTGATCAACATTTGGGTTTGGGACAAACTGATCAACATTTGGG
CCTGGAACAAACTGATCAACATTTGGGTATGGGACAAACTCATGATCATG
AACTGTGCTTAGGAGATGCCCATGACCATGAATTGGGTTTAGGACTGAAC
CATGATGATGAAGGAGATGCTGTTCACACTTATGGGCATGAGAATGAGTT
AGCCGTGGTGGATCAAAAACCTGATCTTGATGACCATGAGATGCCCATTC
CCACACAAAATCATGAGTTGGCCATACCGGAGAACAATGATTTGTCTGTT
TCAGAAAGCCAGGAATTTGATGAGAACATGGCTTTGACTGTGATCCATAA
TCCAGATATGAGTATTGATTCTGCTGATGATGATATGGGTGTTCATGAAT
CCCAGCTTATGGTTACCACACCCCTTGTAATTCAGGCTCGTACATCAGCT
ATAAGTCCTAGTTATGAATTGTCAGTGGGACAAGAATTCCCTGATGTTAA
AAGTTGCCGGAGGGCATTGAGGGATACAGCAATCGCTCTGCACTTTGAGA
TACAGACTATAAAATCTGACAAGACCCGCTTTACTGCTAAATGCCGAAGT
GATGGATGTCCTTGGCGAATTCATGCGGCAAAGCTCCCTGGGGTCCCAAC
TTTTACTATTAGGACAATCCATGAGAGTCATACATGTGGAGGAATTTCGC
ATCTTGGCCATCAGCAAGCCTCAGTTCAATGGGTTGCTAGCTCTGTGGAG
CAAAGGCTAAGGGAGAACCCTAATTGCAAGCCAAAGGAGATACTGGAAGA
GATTCATAGGGTTCATGGCATCACTTTGTCATACAAGCAAGCATGGAGAG
GCAAGGAGCGCATCATGGCTGCAATGCGTGGATCTTTTGAAGAGGGATAT
CGCTTACTTCCACAGTACTGTGAACAGCTGAAACGCACAAACCCAGGCAG
TATCGCATCTGTTTATGGAAACCCAACTGATAATTGCTTCCAACGCCTCT
TCATATCCTTTCAAGCATCAATATATGGTTTTTTAAATGCCTGTCGACCA
CTTTTGGAGCTTGATAGGGTGTATTTAAAGAGCAAGTATCTTGGTACATT
ACTTCTTGCTACTGCATTTGATGGTGATGGGGCTCTCTTTCCTTTGGCAT
TTGGTGTTGTTGATGAGGAGAATGATGATAATTGGATGTGGTTTCTGTCT
GAACTTCGTAACCTGCTGGAGATTAACACTGAAAACATGCCAAGGCTTAC
AATTTTGTCTGACAGGCAGAAGGGAATTGTAGATGGTGTGGACACAAATT
TTCCTACTGCTTTCCATGGATTTTGTATGCGTCACTTGAGTGACAGCTTC
CGCAAGGAGTTTAACAACACGATGCTTGTTAGTCTTCTGTGGGAAGCAGC
TCAAGTTCTTACTATACTTGAATTCGAAGCAAAAATTTTAGAGATTGAAG
AAATATCACATGCTGCTGCATATTGGCTTCGAAGTATTCCACCTCATTTG
TGGGCTACTGCATATTTTGAGGGGCAAAGTTTCGCCAATTTGACGGCTAA
CATAGTTGAATCTTTAAACACATGGATATTAGATGCATCTGGGCTTCCAA
TAATTCAAATGATGGAATGCATTAGAAGGCAGCTGATGACATGGTTTAAC
GAGCGGCGAGAGACGAGTATGCAGTGGACATCAATACTTGTACCTTCTGC
TGAGAGACATGTTGCAGAGGCTCTTGACCGTGCACGAACACACCAGGTAC
TTCGTGCCACTGACGCAGAATTTGAAGTTATATCTCACGAAGGAACAAAT
ACTGTTGACATTAGGACGCGTTGCTGTCATTGTCGCGGGTGGCAGCTCTA
TGGTTTGCCTTGTGCACATGCTGTGGCTGCACTTCTGTCTATTAGGCAGA
ATGTGCATAGATTCACAGAGAGCTGTTTTACTGTTGCAACGTATAGGAAG
ACGTACTCACAGACCATTCATCCAATTCCTGATAAGTCTCTGTGGAAGGA
GTTATCTGAGCCTGAAGGGGATGTCAATGCTATTGCTTCCCAATCTGATC
AACAACTTCAACTTCAACTTATTATTAACCCTCCTAAATCACTCAGGCCA
CCGGGACGGCCCAGAAAGAAACGGGTTCGGGCAGAAGACCGTGGCCGTAT
AAAACGGGTCGTTCATTGTAGTCGTTGCAATCAAACAGGACACTTTAGAA
CCACCTGTGCAGCCCCCATCTAA
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Coding sequence (CDS) from alignment at Chr_3-CM003605.1:27220916..27223288+

>rna-KK1_011056_Cc_Asha_v1.0 ID=rna-KK1_011056_Cc_Asha_v1.0; Name=rna-KK1_011056; organism=Cajanus cajan; type=CDS; length=4746bp; location=Sequence derived from: Chr_3-CM003605.1:27220916..27223288+ (Cajanus cajan
ATGGCTAACCATGATTTGATACTTGGCCAAAGTCATAAATTAGCACTTGG
CCATGACCAGCAACTGATGCTGAGCCATAATCATAGTTTGGGCCTCAGTG
AGAATCATGATTTGGAATTGGGACAAACTGGTGATCAACATTTAGGTCTT
GGTCAAACTGATCAACATTTGGGTTTGGGACAAACTGATCAACATTTGGG
CCTGGAACAAACTGATCAACATTTGGGTATGGGACAAACTCATGATCATG
AACTGTGCTTAGGAGATGCCCATGACCATGAATTGGGTTTAGGACTGAAC
CATGATGATGAAGGAGATGCTGTTCACACTTATGGGCATGAGAATGAGTT
AGCCGTGGTGGATCAAAAACCTGATCTTGATGACCATGAGATGCCCATTC
CCACACAAAATCATGAGTTGGCCATACCGGAGAACAATGATTTGTCTGTT
TCAGAAAGCCAGGAATTTGATGAGAACATGGCTTTGACTGTGATCCATAA
TCCAGATATGAGTATTGATTCTGCTGATGATGATATGGGTGTTCATGAAT
CCCAGCTTATGGTTACCACACCCCTTGTAATTCAGGCTCGTACATCAGCT
ATAAGTCCTAGTTATGAATTGTCAGTGGGACAAGAATTCCCTGATGTTAA
AAGTTGCCGGAGGGCATTGAGGGATACAGCAATCGCTCTGCACTTTGAGA
TACAGACTATAAAATCTGACAAGACCCGCTTTACTGCTAAATGCCGAAGT
GATGGATGTCCTTGGCGAATTCATGCGGCAAAGCTCCCTGGGGTCCCAAC
TTTTACTATTAGGACAATCCATGAGAGTCATACATGTGGAGGAATTTCGC
ATCTTGGCCATCAGCAAGCCTCAGTTCAATGGGTTGCTAGCTCTGTGGAG
CAAAGGCTAAGGGAGAACCCTAATTGCAAGCCAAAGGAGATACTGGAAGA
GATTCATAGGGTTCATGGCATCACTTTGTCATACAAGCAAGCATGGAGAG
GCAAGGAGCGCATCATGGCTGCAATGCGTGGATCTTTTGAAGAGGGATAT
CGCTTACTTCCACAGTACTGTGAACAGCTGAAACGCACAAACCCAGGCAG
TATCGCATCTGTTTATGGAAACCCAACTGATAATTGCTTCCAACGCCTCT
TCATATCCTTTCAAGCATCAATATATGGTTTTTTAAATGCCTGTCGACCA
CTTTTGGAGCTTGATAGGGTGTATTTAAAGAGCAAGTATCTTGGTACATT
ACTTCTTGCTACTGCATTTGATGGTGATGGGGCTCTCTTTCCTTTGGCAT
TTGGTGTTGTTGATGAGGAGAATGATGATAATTGGATGTGGTTTCTGTCT
GAACTTCGTAACCTGCTGGAGATTAACACTGAAAACATGCCAAGGCTTAC
AATTTTGTCTGACAGGCAGAAGGGAATTGTAGATGGTGTGGACACAAATT
TTCCTACTGCTTTCCATGGATTTTGTATGCGTCACTTGAGTGACAGCTTC
CGCAAGGAGTTTAACAACACGATGCTTGTTAGTCTTCTGTGGGAAGCAGC
TCAAGTTCTTACTATACTTGAATTCGAAGCAAAAATTTTAGAGATTGAAG
AAATATCACATGCTGCTGCATATTGGCTTCGAAGTATTCCACCTCATTTG
TGGGCTACTGCATATTTTGAGGGGCAAAGTTTCGCCAATTTGACGGCTAA
CATAGTTGAATCTTTAAACACATGGATATTAGATGCATCTGGGCTTCCAA
TAATTCAAATGATGGAATGCATTAGAAGGCAGCTGATGACATGGTTTAAC
GAGCGGCGAGAGACGAGTATGCAGTGGACATCAATACTTGTACCTTCTGC
TGAGAGACATGTTGCAGAGGCTCTTGACCGTGCACGAACACACCAGGTAC
TTCGTGCCACTGACGCAGAATTTGAAGTTATATCTCACGAAGGAACAAAT
ACTGTTGACATTAGGACGCGTTGCTGTCATTGTCGCGGGTGGCAGCTCTA
TGGTTTGCCTTGTGCACATGCTGTGGCTGCACTTCTGTCTATTAGGCAGA
ATGTGCATAGATTCACAGAGAGCTGTTTTACTGTTGCAACGTATAGGAAG
ACGTACTCACAGACCATTCATCCAATTCCTGATAAGTCTCTGTGGAAGGA
GTTATCTGAGCCTGAAGGGGATGTCAATGCTATTGCTTCCCAATCTGATC
AACAACTTCAACTTCAACTTATTATTAACCCTCCTAAATCACTCAGGCCA
CCGGGACGGCCCAGAAAGAAACGGGTTCGGGCAGAAGACCGTGGCCGTAT
AAAACGGGTCGTTCATTGTAGTCGTTGCAATCAAACAGGACACTTTAGAA
CCACCTGTGCAGCCCCCATCTAAATGGCTAACCATGATTTGATACTTGGC
CAAAGTCATAAATTAGCACTTGGCCATGACCAGCAACTGATGCTGAGCCA
TAATCATAGTTTGGGCCTCAGTGAGAATCATGATTTGGAATTGGGACAAA
CTGGTGATCAACATTTAGGTCTTGGTCAAACTGATCAACATTTGGGTTTG
GGACAAACTGATCAACATTTGGGCCTGGAACAAACTGATCAACATTTGGG
TATGGGACAAACTCATGATCATGAACTGTGCTTAGGAGATGCCCATGACC
ATGAATTGGGTTTAGGACTGAACCATGATGATGAAGGAGATGCTGTTCAC
ACTTATGGGCATGAGAATGAGTTAGCCGTGGTGGATCAAAAACCTGATCT
TGATGACCATGAGATGCCCATTCCCACACAAAATCATGAGTTGGCCATAC
CGGAGAACAATGATTTGTCTGTTTCAGAAAGCCAGGAATTTGATGAGAAC
ATGGCTTTGACTGTGATCCATAATCCAGATATGAGTATTGATTCTGCTGA
TGATGATATGGGTGTTCATGAATCCCAGCTTATGGTTACCACACCCCTTG
TAATTCAGGCTCGTACATCAGCTATAAGTCCTAGTTATGAATTGTCAGTG
GGACAAGAATTCCCTGATGTTAAAAGTTGCCGGAGGGCATTGAGGGATAC
AGCAATCGCTCTGCACTTTGAGATACAGACTATAAAATCTGACAAGACCC
GCTTTACTGCTAAATGCCGAAGTGATGGATGTCCTTGGCGAATTCATGCG
GCAAAGCTCCCTGGGGTCCCAACTTTTACTATTAGGACAATCCATGAGAG
TCATACATGTGGAGGAATTTCGCATCTTGGCCATCAGCAAGCCTCAGTTC
AATGGGTTGCTAGCTCTGTGGAGCAAAGGCTAAGGGAGAACCCTAATTGC
AAGCCAAAGGAGATACTGGAAGAGATTCATAGGGTTCATGGCATCACTTT
GTCATACAAGCAAGCATGGAGAGGCAAGGAGCGCATCATGGCTGCAATGC
GTGGATCTTTTGAAGAGGGATATCGCTTACTTCCACAGTACTGTGAACAG
CTGAAACGCACAAACCCAGGCAGTATCGCATCTGTTTATGGAAACCCAAC
TGATAATTGCTTCCAACGCCTCTTCATATCCTTTCAAGCATCAATATATG
GTTTTTTAAATGCCTGTCGACCACTTTTGGAGCTTGATAGGGTGTATTTA
AAGAGCAAGTATCTTGGTACATTACTTCTTGCTACTGCATTTGATGGTGA
TGGGGCTCTCTTTCCTTTGGCATTTGGTGTTGTTGATGAGGAGAATGATG
ATAATTGGATGTGGTTTCTGTCTGAACTTCGTAACCTGCTGGAGATTAAC
ACTGAAAACATGCCAAGGCTTACAATTTTGTCTGACAGGCAGAAGGGAAT
TGTAGATGGTGTGGACACAAATTTTCCTACTGCTTTCCATGGATTTTGTA
TGCGTCACTTGAGTGACAGCTTCCGCAAGGAGTTTAACAACACGATGCTT
GTTAGTCTTCTGTGGGAAGCAGCTCAAGTTCTTACTATACTTGAATTCGA
AGCAAAAATTTTAGAGATTGAAGAAATATCACATGCTGCTGCATATTGGC
TTCGAAGTATTCCACCTCATTTGTGGGCTACTGCATATTTTGAGGGGCAA
AGTTTCGCCAATTTGACGGCTAACATAGTTGAATCTTTAAACACATGGAT
ATTAGATGCATCTGGGCTTCCAATAATTCAAATGATGGAATGCATTAGAA
GGCAGCTGATGACATGGTTTAACGAGCGGCGAGAGACGAGTATGCAGTGG
ACATCAATACTTGTACCTTCTGCTGAGAGACATGTTGCAGAGGCTCTTGA
CCGTGCACGAACACACCAGGTACTTCGTGCCACTGACGCAGAATTTGAAG
TTATATCTCACGAAGGAACAAATACTGTTGACATTAGGACGCGTTGCTGT
CATTGTCGCGGGTGGCAGCTCTATGGTTTGCCTTGTGCACATGCTGTGGC
TGCACTTCTGTCTATTAGGCAGAATGTGCATAGATTCACAGAGAGCTGTT
TTACTGTTGCAACGTATAGGAAGACGTACTCACAGACCATTCATCCAATT
CCTGATAAGTCTCTGTGGAAGGAGTTATCTGAGCCTGAAGGGGATGTCAA
TGCTATTGCTTCCCAATCTGATCAACAACTTCAACTTCAACTTATTATTA
ACCCTCCTAAATCACTCAGGCCACCGGGACGGCCCAGAAAGAAACGGGTT
CGGGCAGAAGACCGTGGCCGTATAAAACGGGTCGTTCATTGTAGTCGTTG
CAATCAAACAGGACACTTTAGAACCACCTGTGCAGCCCCCATCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR006564Znf_PMZ
IPR004332Transposase_MuDR
IPR007527Znf_SWIM
IPR018289MULE_transposase_dom
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding