rna-KK1_021919
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of rna-KK1_021919 vs. DB:Swiss
Match: AX6B_SOYBN (Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.555e-48 Identity = 69/90 (76.67%), Postives = 80/90 (88.89%), Query Frame = 1 Query: 1 MGFRFAAIRRASFTARKAASKSVEVPKGYLAVYVGEKQKRFMIPISYLNQPSFQDLLGQAEEEFGYDHPMGGLTIPCSEDIFQHITSHLN 270 MGFR IR+ASF+A +A+SK+V+V KGYLAVYVGEK +RF+IP+SYLN+PSFQDLL QAEEEFGY HP GGLTIPCSED+FQHITS LN Sbjct: 1 MGFRLPGIRKASFSANQASSKAVDVEKGYLAVYVGEKMRRFVIPVSYLNKPSFQDLLSQAEEEFGYHHPNGGLTIPCSEDVFQHITSFLN 90
BLAST of rna-KK1_021919 vs. DB:Swiss
Match: AX10A_SOYBN (Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 1.725e-48 Identity = 68/90 (75.56%), Postives = 76/90 (84.44%), Query Frame = 1 Query: 1 MGFRFAAIRRASFTARKAASKSVEVPKGYLAVYVGEKQKRFMIPISYLNQPSFQDLLGQAEEEFGYDHPMGGLTIPCSEDIFQHITSHLN 270 MGFR IR+ S A +A+SKSVEVPKGYL VYVG+K +RF+IP+SYLNQPSFQDLL QAEEEFGYDHPMGGLTIPC ED F +TSHLN Sbjct: 1 MGFRLPGIRKTSIAANQASSKSVEVPKGYLVVYVGDKMRRFLIPVSYLNQPSFQDLLNQAEEEFGYDHPMGGLTIPCKEDEFLTVTSHLN 90
BLAST of rna-KK1_021919 vs. DB:Swiss
Match: ARG7_VIGRR (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 5.803e-45 Identity = 65/92 (70.65%), Postives = 75/92 (81.52%), Query Frame = 1 Query: 1 MGFRFAAIRRASFTARKAASKSVEVPKGYLAVYVGEKQKRFMIPISYLNQPSFQDLLGQAEEEFGYDHPMGGLTIPCSEDIFQHITSHLNGQ 276 MGFR IR+ +A+SK ++ PKGYLAVYVGE KRF+IP+S+LNQP FQDLL QAEEEFGYDHPMGGLTIPCSED+FQHITS L+ Q Sbjct: 1 MGFRLPGIRKTLSARNEASSKVLDAPKGYLAVYVGENMKRFVIPVSHLNQPLFQDLLSQAEEEFGYDHPMGGLTIPCSEDLFQHITSCLSAQ 92
BLAST of rna-KK1_021919 vs. DB:Swiss
Match: A10A5_SOYBN (Auxin-induced protein 10A5 OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 5.250e-44 Identity = 65/91 (71.43%), Postives = 76/91 (83.52%), Query Frame = 1 Query: 1 MGFRFAAI-RRASFTARKAASKSVEVPKGYLAVYVGEKQKRFMIPISYLNQPSFQDLLGQAEEEFGYDHPMGGLTIPCSEDIFQHITSHLN 270 MGFR A I RR SF +AASK V+VPKGY AVYVG+K +RF IP+SYLN+PSFQ+LL QAEEEFGYDHPMGGLTIPC E+ F ++T+HLN Sbjct: 1 MGFRIAGIVRRTSFYTTQAASKRVDVPKGYAAVYVGDKMRRFTIPVSYLNEPSFQELLSQAEEEFGYDHPMGGLTIPCKEEEFLNVTAHLN 91
BLAST of rna-KK1_021919 vs. DB:Swiss
Match: AX15A_SOYBN (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 6.074e-44 Identity = 67/90 (74.44%), Postives = 73/90 (81.11%), Query Frame = 1 Query: 1 MGFRFAAIRRASFTARKAASKSVEVPKGYLAVYVGEKQKRFMIPISYLNQPSFQDLLGQAEEEFGYDHPMGGLTIPCSEDIFQHITSHLN 270 MGFR IR+AS K+ + PKGYLAVYVGEK KRF+IP+SYLNQPSFQDLL QAEEEFGYDHPMGGLTIPCSED+FQ ITS LN Sbjct: 1 MGFRLPGIRKAS--------KAADAPKGYLAVYVGEKLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQCITSCLN 82
BLAST of rna-KK1_021919 vs. DB:Swiss
Match: AXX15_SOYBN (Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.765e-42 Identity = 64/90 (71.11%), Postives = 72/90 (80.00%), Query Frame = 1 Query: 1 MGFRFAAIRRASFTARKAASKSVEVPKGYLAVYVGEKQKRFMIPISYLNQPSFQDLLGQAEEEFGYDHPMGGLTIPCSEDIFQHITSHLN 270 MGFR IR+AS +V+ PKGYLAVYVGEK KRF+IP+SY+NQPSFQDLL QAEEEFGYDHPMGGLTIPCSE++FQ IT LN Sbjct: 1 MGFRLPGIRKAS--------NAVDAPKGYLAVYVGEKMKRFVIPVSYMNQPSFQDLLTQAEEEFGYDHPMGGLTIPCSEEVFQRITCCLN 82
BLAST of rna-KK1_021919 vs. DB:Swiss
Match: SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 9.023e-33 Identity = 53/89 (59.55%), Postives = 68/89 (76.40%), Query Frame = 1 Query: 19 AIRRASFTARKAASKSVEV----PKGYLAVYVGEKQK-RFMIPISYLNQPSFQDLLGQAEEEFGYDHPMGGLTIPCSEDIFQHITSHLN 270 A+ R+ A+K S+S PKG+LAVYVGE QK R+++P+SYLNQPSFQ LL ++EEEFG+DHPMGGLTIPC ED F ++TS L+ Sbjct: 2 ALVRSLLVAKKILSRSAAAVSAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFINVTSRLH 90
BLAST of rna-KK1_021919 vs. DB:Swiss
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 4.470e-32 Identity = 53/88 (60.23%), Postives = 66/88 (75.00%), Query Frame = 1 Query: 19 AIRRASFTARKAASKSV----EVPKGYLAVYVGEKQK-RFMIPISYLNQPSFQDLLGQAEEEFGYDHPMGGLTIPCSEDIFQHITSHL 267 A R+ A+K S+S PKG+LAVYVGE QK R+++P+SYLNQPSFQ LL ++EEEFG+DHPMGGLTIPC ED F ++TS L Sbjct: 2 AFVRSLLGAKKILSRSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFINVTSRL 89
BLAST of rna-KK1_021919 vs. DB:Swiss
Match: SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 5.751e-32 Identity = 52/88 (59.09%), Postives = 67/88 (76.14%), Query Frame = 1 Query: 19 AIRRASFTARKAASKSVEV----PKGYLAVYVGEKQK-RFMIPISYLNQPSFQDLLGQAEEEFGYDHPMGGLTIPCSEDIFQHITSHL 267 A+ R+ A+K S+S PKG+LAVYVGE QK R+++P+SYLNQPSFQ LL ++E+EFG+DHPMGGLTIPC ED F ++TS L Sbjct: 2 ALVRSLLGAKKILSRSTAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHPMGGLTIPCHEDTFINVTSRL 89
BLAST of rna-KK1_021919 vs. DB:Swiss
Match: SAU21_ARATH (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 6.688e-32 Identity = 52/87 (59.77%), Postives = 67/87 (77.01%), Query Frame = 1 Query: 19 AIRRASFTARKAASKSVE--VPKGYLAVYVGEKQK-RFMIPISYLNQPSFQDLLGQAEEEFGYDHPMGGLTIPCSEDIFQHITSHLN 270 A+ R+ A+K S+S PKG+LAVYVGE QK R+++P+SYL+QPSFQ LL ++EEEFG+DHPMGGLTIPC ED F ++TS L Sbjct: 2 ALVRSLLGAKKILSRSTASAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFINVTSRLQ 88 The following BLAST results are available for this feature:
BLAST of rna-KK1_021919 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: C. cajan Asha genome v1.0 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: Cajanus cajan Asha genome v1.0
Date Performed: 2019-09-17
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-KK1_021919_Cc_Asha_v1.0 ID=rna-KK1_021919_Cc_Asha_v1.0; Name=rna-KK1_021919; organism=Cajanus cajan; type=mRNA; length=279bpback to top protein sequence of rna-KK1_021919_Cc_Asha_v1.0 >rna-KK1_021919_Cc_Asha_v1.0 ID=rna-KK1_021919_Cc_Asha_v1.0; Name=rna-KK1_021919_Cc_Asha_v1.0; organism=Cajanus cajan; type=polypeptide; length=92bpback to top mRNA from alignment at Chr_4-CM003606.1:4002779..4003057- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.>rna-KK1_021919_Cc_Asha_v1.0 ID=rna-KK1_021919_Cc_Asha_v1.0; Name=rna-KK1_021919; organism=Cajanus cajan; type=mRNA; length=279bp; location=Sequence derived from: Chr_4-CM003606.1:4002779..4003057- (Cajanus cajanback to top Coding sequence (CDS) from alignment at Chr_4-CM003606.1:4002779..4003057- >rna-KK1_021919_Cc_Asha_v1.0 ID=rna-KK1_021919_Cc_Asha_v1.0; Name=rna-KK1_021919; organism=Cajanus cajan; type=CDS; length=558bp; location=Sequence derived from: Chr_4-CM003606.1:4002779..4003057- (Cajanus cajanback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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