rna-KK1_016107

Transcript Overview
Namerna-KK1_016107
Unique Namerna-KK1_016107_Cc_Asha_v1.0
TypemRNA
OrganismCajanus cajan (pigeon pea)
Sequence length600
ProductRas-related protein RHN1
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_8-CM003610.1supercontigChr_8-CM003610.1:3087704..3090389 +Cajanus cajan Asha genome v1.0n/a
Chr_8-CM003610.1supercontigChr_8-CM003610.1:3087704..3090389 +Cajanus cajan Asha genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Cajanus cajan Asha genome v1.02019-09-17
BLAST: C. cajan Asha genome v1.0 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
cccrR0052Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
cccrR0070Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
cccrR0107Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ccpsR042Pisum sativum Cameor genome v1aPisum sativum
ccpsR055Pisum sativum Cameor genome v1aPisum sativum
ccpsR074Pisum sativum Cameor genome v1aPisum sativum
ccpsR080Pisum sativum Cameor genome v1aPisum sativum
ccpsR084Pisum sativum Cameor genome v1aPisum sativum
ccpsR090Pisum sativum Cameor genome v1aPisum sativum
ccccR027Cajanus cajan Asha genome v1.0Cajanus cajan
ccccR031Cajanus cajan Asha genome v1.0Cajanus cajan
ccccR041Cajanus cajan Asha genome v1.0Cajanus cajan
ccpvR0068Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccpvR0086Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caiccL0010Cicer arietinum ICC 4958 genome v2Cicer arietinum
ccvuR0061Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccvuR0087Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccvuR0095Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caiccL0683Cicer arietinum ICC 4958 genome v2Cicer arietinum
caccL0007Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caccL0734Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caccL1062Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
anccL0119Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccL0649Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccL0917Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccL1183Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccL1187Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asccL0395Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asccL0485Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asccL0926Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cctifR0069Vicia faba cv. Tiffany genome v1.0Vicia faba
cctifR0093Vicia faba cv. Tiffany genome v1.0Vicia faba
cctifR0103Vicia faba cv. Tiffany genome v1.0Vicia faba
ccvfhR0072Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccvfhR0096Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccvfhR0105Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccvrvR0074Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccvrvR0088Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccvrvR0090Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccvssR0073Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccvuaR0064Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
ccvssR0093Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccvuaR0081Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
ccvssR0099Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccvuaR0090Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canccL0740Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canccL1062Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjccL0005Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjccL0338Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjccL1020Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carccL0789Cicer arietinum
carccL1140Cicer arietinum
ccccaR0096Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccccaR0113Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccvumR0055Vigna umbellata FF25 genome v1.0Vigna umbellata
ccvumR0081Vigna umbellata FF25 genome v1.0Vigna umbellata
ccvumR0120Vigna umbellata FF25 genome v1.0Vigna umbellata

Orthologs
Gene/TranscriptAssemblySpecies
Ca_05973Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vum_07G00154.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Ca_15725.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
jg9829.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Hedin2.R1.5g007680.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-XM_012716665.2Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Psat5g298800.1Pisum sativum Cameor genome v1aPisum sativum
Phvul.002G313600.2Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Cr_04388.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Va05G054690.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Ca_00180.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Vigun05g286000.2Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
LR48_mrnaVigan05g213700Vigna angularis Jingnong 6 genome v1.1Vigna angularis
evm.model.Chr05.2672.1.6211317aVigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
jg27419.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Cr_00942.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Ca_02828Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
rna-XM_022783038.1Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vfaba.Hedin2.R1.6g188920.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vfaba.Tiffany.R1.5g006440.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Psat7g014200.1Pisum sativum Cameor genome v1aPisum sativum
Vfaba.Tiffany.R1.6g145640.1Vicia faba cv. Tiffany genome v1.0Vicia faba
LR48_mrnaVigan11g082200Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vum_01G00215.1Vigna umbellata FF25 genome v1.0Vigna umbellata
evm.model.Chr03.830Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vigun03g020500.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Va01G002570.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-XM_014645001.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Cc_v2.0_22939.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
rna-KK1_000384Cajanus cajan Asha genome v1.0Cajanus cajan
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-KK1_016107gene-KK1_016107_Cc_Asha_v1.0Cajanus cajangene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-KK1_016107rna-KK1_016107_Cc_Asha_v1.0-proteinCajanus cajanpolypeptide
rna-KK1_016107_Cc_Asha_v1.0rna-KK1_016107_Cc_Asha_v1.0Cajanus cajanpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-KK1_016107_Cc_Asha_v1.0-exon-Chr_8-CM003610.1_Cc_Asha_v1.0-1571082112:3087704..3087742rna-KK1_016107_Cc_Asha_v1.0-exon-Chr_8-CM003610.1_Cc_Asha_v1.0-1571082112:3087704..3087742Cajanus cajanexon
rna-KK1_016107_Cc_Asha_v1.0-exon-Chr_8-CM003610.1_Cc_Asha_v1.0-1571847872:3087704..3087742rna-KK1_016107_Cc_Asha_v1.0-exon-Chr_8-CM003610.1_Cc_Asha_v1.0-1571847872:3087704..3087742Cajanus cajanexon
rna-KK1_016107_Cc_Asha_v1.0-exon-Chr_8-CM003610.1_Cc_Asha_v1.0-1571082112:3088400..3088477rna-KK1_016107_Cc_Asha_v1.0-exon-Chr_8-CM003610.1_Cc_Asha_v1.0-1571082112:3088400..3088477Cajanus cajanexon
rna-KK1_016107_Cc_Asha_v1.0-exon-Chr_8-CM003610.1_Cc_Asha_v1.0-1571847872:3088400..3088477rna-KK1_016107_Cc_Asha_v1.0-exon-Chr_8-CM003610.1_Cc_Asha_v1.0-1571847872:3088400..3088477Cajanus cajanexon
rna-KK1_016107_Cc_Asha_v1.0-exon-Chr_8-CM003610.1_Cc_Asha_v1.0-1571082112:3088586..3088753rna-KK1_016107_Cc_Asha_v1.0-exon-Chr_8-CM003610.1_Cc_Asha_v1.0-1571082112:3088586..3088753Cajanus cajanexon
rna-KK1_016107_Cc_Asha_v1.0-exon-Chr_8-CM003610.1_Cc_Asha_v1.0-1571847872:3088586..3088753rna-KK1_016107_Cc_Asha_v1.0-exon-Chr_8-CM003610.1_Cc_Asha_v1.0-1571847872:3088586..3088753Cajanus cajanexon
rna-KK1_016107_Cc_Asha_v1.0-exon-Chr_8-CM003610.1_Cc_Asha_v1.0-1571082112:3088988..3089036rna-KK1_016107_Cc_Asha_v1.0-exon-Chr_8-CM003610.1_Cc_Asha_v1.0-1571082112:3088988..3089036Cajanus cajanexon
rna-KK1_016107_Cc_Asha_v1.0-exon-Chr_8-CM003610.1_Cc_Asha_v1.0-1571847872:3088988..3089036rna-KK1_016107_Cc_Asha_v1.0-exon-Chr_8-CM003610.1_Cc_Asha_v1.0-1571847872:3088988..3089036Cajanus cajanexon
rna-KK1_016107_Cc_Asha_v1.0-exon-Chr_8-CM003610.1_Cc_Asha_v1.0-1571082112:3089350..3089423rna-KK1_016107_Cc_Asha_v1.0-exon-Chr_8-CM003610.1_Cc_Asha_v1.0-1571082112:3089350..3089423Cajanus cajanexon
rna-KK1_016107_Cc_Asha_v1.0-exon-Chr_8-CM003610.1_Cc_Asha_v1.0-1571847872:3089350..3089423rna-KK1_016107_Cc_Asha_v1.0-exon-Chr_8-CM003610.1_Cc_Asha_v1.0-1571847872:3089350..3089423Cajanus cajanexon
rna-KK1_016107_Cc_Asha_v1.0-exon-Chr_8-CM003610.1_Cc_Asha_v1.0-1571082112:3090026..3090119rna-KK1_016107_Cc_Asha_v1.0-exon-Chr_8-CM003610.1_Cc_Asha_v1.0-1571082112:3090026..3090119Cajanus cajanexon
rna-KK1_016107_Cc_Asha_v1.0-exon-Chr_8-CM003610.1_Cc_Asha_v1.0-1571847872:3090026..3090119rna-KK1_016107_Cc_Asha_v1.0-exon-Chr_8-CM003610.1_Cc_Asha_v1.0-1571847872:3090026..3090119Cajanus cajanexon
rna-KK1_016107_Cc_Asha_v1.0-exon-Chr_8-CM003610.1_Cc_Asha_v1.0-1571082112:3090292..3090389rna-KK1_016107_Cc_Asha_v1.0-exon-Chr_8-CM003610.1_Cc_Asha_v1.0-1571082112:3090292..3090389Cajanus cajanexon
rna-KK1_016107_Cc_Asha_v1.0-exon-Chr_8-CM003610.1_Cc_Asha_v1.0-1571847872:3090292..3090389rna-KK1_016107_Cc_Asha_v1.0-exon-Chr_8-CM003610.1_Cc_Asha_v1.0-1571847872:3090292..3090389Cajanus cajanexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-KK1_016107_Cc_Asha_v1.0-CDS-Chr_8-CM003610.1_Cc_Asha_v1.0-1571082112:3087704..3087742rna-KK1_016107_Cc_Asha_v1.0-CDS-Chr_8-CM003610.1_Cc_Asha_v1.0-1571082112:3087704..3087742Cajanus cajanCDS
rna-KK1_016107_Cc_Asha_v1.0-CDS-Chr_8-CM003610.1_Cc_Asha_v1.0-1571847872:3087704..3087742rna-KK1_016107_Cc_Asha_v1.0-CDS-Chr_8-CM003610.1_Cc_Asha_v1.0-1571847872:3087704..3087742Cajanus cajanCDS
rna-KK1_016107_Cc_Asha_v1.0-CDS-Chr_8-CM003610.1_Cc_Asha_v1.0-1571082112:3088400..3088477rna-KK1_016107_Cc_Asha_v1.0-CDS-Chr_8-CM003610.1_Cc_Asha_v1.0-1571082112:3088400..3088477Cajanus cajanCDS
rna-KK1_016107_Cc_Asha_v1.0-CDS-Chr_8-CM003610.1_Cc_Asha_v1.0-1571847872:3088400..3088477rna-KK1_016107_Cc_Asha_v1.0-CDS-Chr_8-CM003610.1_Cc_Asha_v1.0-1571847872:3088400..3088477Cajanus cajanCDS
rna-KK1_016107_Cc_Asha_v1.0-CDS-Chr_8-CM003610.1_Cc_Asha_v1.0-1571082112:3088586..3088753rna-KK1_016107_Cc_Asha_v1.0-CDS-Chr_8-CM003610.1_Cc_Asha_v1.0-1571082112:3088586..3088753Cajanus cajanCDS
rna-KK1_016107_Cc_Asha_v1.0-CDS-Chr_8-CM003610.1_Cc_Asha_v1.0-1571847872:3088586..3088753rna-KK1_016107_Cc_Asha_v1.0-CDS-Chr_8-CM003610.1_Cc_Asha_v1.0-1571847872:3088586..3088753Cajanus cajanCDS
rna-KK1_016107_Cc_Asha_v1.0-CDS-Chr_8-CM003610.1_Cc_Asha_v1.0-1571082112:3088988..3089036rna-KK1_016107_Cc_Asha_v1.0-CDS-Chr_8-CM003610.1_Cc_Asha_v1.0-1571082112:3088988..3089036Cajanus cajanCDS
rna-KK1_016107_Cc_Asha_v1.0-CDS-Chr_8-CM003610.1_Cc_Asha_v1.0-1571847872:3088988..3089036rna-KK1_016107_Cc_Asha_v1.0-CDS-Chr_8-CM003610.1_Cc_Asha_v1.0-1571847872:3088988..3089036Cajanus cajanCDS
rna-KK1_016107_Cc_Asha_v1.0-CDS-Chr_8-CM003610.1_Cc_Asha_v1.0-1571082112:3089350..3089423rna-KK1_016107_Cc_Asha_v1.0-CDS-Chr_8-CM003610.1_Cc_Asha_v1.0-1571082112:3089350..3089423Cajanus cajanCDS
rna-KK1_016107_Cc_Asha_v1.0-CDS-Chr_8-CM003610.1_Cc_Asha_v1.0-1571847872:3089350..3089423rna-KK1_016107_Cc_Asha_v1.0-CDS-Chr_8-CM003610.1_Cc_Asha_v1.0-1571847872:3089350..3089423Cajanus cajanCDS
rna-KK1_016107_Cc_Asha_v1.0-CDS-Chr_8-CM003610.1_Cc_Asha_v1.0-1571082112:3090026..3090119rna-KK1_016107_Cc_Asha_v1.0-CDS-Chr_8-CM003610.1_Cc_Asha_v1.0-1571082112:3090026..3090119Cajanus cajanCDS
rna-KK1_016107_Cc_Asha_v1.0-CDS-Chr_8-CM003610.1_Cc_Asha_v1.0-1571847872:3090026..3090119rna-KK1_016107_Cc_Asha_v1.0-CDS-Chr_8-CM003610.1_Cc_Asha_v1.0-1571847872:3090026..3090119Cajanus cajanCDS
rna-KK1_016107_Cc_Asha_v1.0-CDS-Chr_8-CM003610.1_Cc_Asha_v1.0-1571082112:3090292..3090389rna-KK1_016107_Cc_Asha_v1.0-CDS-Chr_8-CM003610.1_Cc_Asha_v1.0-1571082112:3090292..3090389Cajanus cajanCDS
rna-KK1_016107_Cc_Asha_v1.0-CDS-Chr_8-CM003610.1_Cc_Asha_v1.0-1571847872:3090292..3090389rna-KK1_016107_Cc_Asha_v1.0-CDS-Chr_8-CM003610.1_Cc_Asha_v1.0-1571847872:3090292..3090389Cajanus cajanCDS


Homology
BLAST of rna-KK1_016107 vs. DB:Swiss
Match: RHN1_NICPL (Ras-related protein RHN1 OS=Nicotiana plumbaginifolia OX=4092 GN=RHN1 PE=2 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 3.594e-94
Identity = 134/200 (67.00%), Postives = 159/200 (79.50%), Query Frame = 1
Query:    1 MARTGNKSLQAKLVLLGDMGAGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHSLAPMYYRGAAAAIVVYDITSMDSFVRAKKWVREVQRQANASLTMFLVANKADLEADRKVSNEEGEEYAKEHGLSFLETSAKTAQNVNELFYEIAKRLAKANPLRQ-TGIKLHTRPRETRRGFFCCS 597
            MA + + +L AKLVLLGDMGAGK+SLV+RFVKGQF E+QESTIGAAFF+  L++N ATVKF+IWDTAGQERYHSLAPMYYRGAAAAI+VYDITS DSF RAKKWV+E+Q+Q N ++ M L  NKADLE  RKV+ EE   YA+E+GL F+ETSAKTA NVN +FYEIAKRL +A P +   G+ L  R  E  R   CC+
Sbjct:    1 MASSSHNNLNAKLVLLGDMGAGKSSLVIRFVKGQFLEFQESTIGAAFFSSTLAVNNATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFARAKKWVQELQKQGNPNMVMALAGNKADLEDRRKVTAEEARLYAEENGLFFMETSAKTAVNVNAIFYEIAKRLPRAQPAQNPAGMVLVDRAAEGTRATSCCT 200          
BLAST of rna-KK1_016107 vs. DB:Swiss
Match: RAB5_TOBAC (Ras-related protein Rab5 OS=Nicotiana tabacum OX=4097 GN=RAB5 PE=2 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 7.464e-93
Identity = 130/200 (65.00%), Postives = 159/200 (79.50%), Query Frame = 1
Query:    1 MARTGNKSLQAKLVLLGDMGAGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHSLAPMYYRGAAAAIVVYDITSMDSFVRAKKWVREVQRQANASLTMFLVANKADLEADRKVSNEEGEEYAKEHGLSFLETSAKTAQNVNELFYEIAKRLAKANPLRQT-GIKLHTRPRETRRGFFCCS 597
            MA   + +L AKLVLLGDMGAGK+SLV+RFVKGQF E+QESTIGAAFF+  +S+N ATVKF+IWDTAGQERYHSLAPMYYRGAAAAI+VYDITS +S  RAKKWV+E+Q+Q N ++ M L  NKADLE  RKV+ EE   YA+E+GL F+ETSAKTA NVN++FYEIAKRL +A P +   G+ L  +P +  +   CC+
Sbjct:    1 MASRRHNNLNAKLVLLGDMGAGKSSLVIRFVKGQFLEFQESTIGAAFFSSTVSVNNATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSTESLARAKKWVQELQKQGNPNMVMALAGNKADLEDKRKVTAEEARLYAEENGLFFMETSAKTATNVNDIFYEIAKRLPRAQPAQNPAGMVLEDKPAQGSQAASCCT 200          
BLAST of rna-KK1_016107 vs. DB:Swiss
Match: RAF2A_ARATH (Ras-related protein RABF2a OS=Arabidopsis thaliana OX=3702 GN=RABF2A PE=1 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 3.446e-91
Identity = 131/200 (65.50%), Postives = 157/200 (78.50%), Query Frame = 1
Query:    1 MARTGNKSLQAKLVLLGDMGAGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHSLAPMYYRGAAAAIVVYDITSMDSFVRAKKWVREVQRQANASLTMFLVANKADLEADRKVSNEEGEEYAKEHGLSFLETSAKTAQNVNELFYEIAKRLAKANPLRQ-TGIKLHTRPRETRRGFFCCS 597
            MA +GNK++ AKLVLLGD+GAGK+SLVLRFVK QF E+QESTIGAAFF+Q L++N+ATVKF+IWDTAGQERYHSLAPMYYRGAAAAI+V+DIT+  SF RAKKWV+E+Q Q N ++ M L  NKADL   RKVS EE E YA+E+ L F+ETSAKTA NV ++FYEIAKRL +  P    TG+ L   P  T     CC+
Sbjct:    1 MASSGNKNINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVSAEEAEIYAQENSLFFMETSAKTATNVKDIFYEIAKRLPRVQPAENPTGMVLPNGPGATAVSSSCCA 200          
BLAST of rna-KK1_016107 vs. DB:Swiss
Match: RAF2B_ARATH (Ras-related protein RABF2b OS=Arabidopsis thaliana OX=3702 GN=RABF2B PE=1 SV=1)

HSP 1 Score: 264.233 bits (674), Expect = 1.680e-89
Identity = 127/200 (63.50%), Postives = 157/200 (78.50%), Query Frame = 1
Query:    1 MARTGNKSLQAKLVLLGDMGAGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHSLAPMYYRGAAAAIVVYDITSMDSFVRAKKWVREVQRQANASLTMFLVANKADLEADRKVSNEEGEEYAKEHGLSFLETSAKTAQNVNELFYEIAKRLAKANPLRQ-TGIKLHTRPRETRRGFFCCS 597
            MA  GNKS+ AKLVLLGD+GAGK+SLVLRFVK QF E+QESTIGAAFF+Q L++N+ATVKF+IWDTAGQERYHSLAPMYYRGAAAAI+V+D+T+  SF RAKKWV+E+Q Q N ++ M L  NK+DL   RKV+ E+ + YA+E+GL F+ETSAKTA NV E+FYEIA+RL +  P    TG+ L  R  +      CC+
Sbjct:    1 MAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTENPTGMVLPDRAMDRAVSSSCCA 200          
BLAST of rna-KK1_016107 vs. DB:Swiss
Match: RAB5A_ORYSJ (Ras-related protein Rab5A OS=Oryza sativa subsp. japonica OX=39947 GN=RAB5A PE=1 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 1.524e-86
Identity = 129/201 (64.18%), Postives = 154/201 (76.62%), Query Frame = 1
Query:    4 ARTGNKSLQAKLVLLGDMGAGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHSLAPMYYRGAAAAIVVYDITSMDSFVRAKKWVREVQRQANASLTMFLVANKADLEADRKVSNEEGEEYAKEHGLSFLETSAKTAQNVNELFYEIAKRLAKANPLRQT--GIKLHTRPRETR-RGFFCCS 597
            A  GNK   AKLVLLGD+G GK+SLVLRFVKGQF E+QESTIGAAFF+Q L++N+ TVKF+IWDTAGQERYHSLAPMYYRGAAAAIVVYDIT+  SF RAKKWV+E+Q Q N +  M L  NKAD+   R+V  EE + YA+E+GL F+ETSAKTA NVN++F+EIAKRL +    + T  G+ L+ RP E       CCS
Sbjct:    3 ANPGNKIRNAKLVLLGDVGTGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQERYHSLAPMYYRGAAAAIVVYDITNAASFTRAKKWVQELQAQGNPNTIMALAGNKADMVEARQVPAEEAKTYAQENGLFFMETSAKTAINVNDVFHEIAKRLLQGQQAQDTPAGMVLNQRPAERMVSSSSCCS 203          
BLAST of rna-KK1_016107 vs. DB:Swiss
Match: RAB5C_CANLF (Ras-related protein Rab-5C OS=Canis lupus familiaris OX=9615 GN=RAB5C PE=2 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 1.511e-81
Identity = 121/202 (59.90%), Postives = 145/202 (71.78%), Query Frame = 1
Query:   13 GNKSLQAKLVLLGDMGAGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHSLAPMYYRGAAAAIVVYDITSMDSFVRAKKWVREVQRQANASLTMFLVANKADLEADRKVSNEEGEEYAKEHGLSFLETSAKTAQNVNELFYEIAKRLAK-------ANPLRQTGIKLHTRPRETRRGFFCCS 597
            GNK  Q KLVLLG+   GK+SLVLRFVKGQF EYQESTIGAAF TQ + L++ TVKF+IWDTAGQERYHSLAPMYYRGA AAIVVYDIT+ D+F RAK WV+E+QRQA+ ++ + L  NKADL + R V  +E + YA ++ L F+ETSAKTA NVNE+F  IAK+L K         P R  G+ L      +R    CCS
Sbjct:   16 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAAGAPSRNRGVDLQENSPASRSQ--CCS 215          
BLAST of rna-KK1_016107 vs. DB:Swiss
Match: RAB5C_MOUSE (Ras-related protein Rab-5C OS=Mus musculus OX=10090 GN=Rab5c PE=1 SV=2)

HSP 1 Score: 243.817 bits (621), Expect = 2.640e-81
Identity = 117/183 (63.93%), Postives = 139/183 (75.96%), Query Frame = 1
Query:   13 GNKSLQAKLVLLGDMGAGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHSLAPMYYRGAAAAIVVYDITSMDSFVRAKKWVREVQRQANASLTMFLVANKADLEADRKVSNEEGEEYAKEHGLSFLETSAKTAQNVNELFYEIAKRLAKANPLRQTGIKLHTR 561
            GNK  Q KLVLLG+   GK+SLVLRFVKGQF EYQESTIGAAF TQ + L++ TVKF+IWDTAGQERYHSLAPMYYRGA AAIVVYDIT+ D+F RAK WV+E+QRQA+ ++ + L  NKADL + R V  +E + YA ++ L F+ETSAKTA NVNE+F  IAK+L K  P    G    TR
Sbjct:   16 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAAGAPGRTR 198          
BLAST of rna-KK1_016107 vs. DB:Swiss
Match: RAB5C_BOVIN (Ras-related protein Rab-5C OS=Bos taurus OX=9913 GN=RAB5C PE=2 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 2.850e-81
Identity = 121/202 (59.90%), Postives = 146/202 (72.28%), Query Frame = 1
Query:   13 GNKSLQAKLVLLGDMGAGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHSLAPMYYRGAAAAIVVYDITSMDSFVRAKKWVREVQRQANASLTMFLVANKADLEADRKVSNEEGEEYAKEHGLSFLETSAKTAQNVNELFYEIAKRLAKANPL-------RQTGIKLHTRPRETRRGFFCCS 597
            GNK  Q KLVLLG+   GK+SLVLRFVKGQF EYQESTIGAAF TQ + L++ TVKF+IWDTAGQERYHSLAPMYYRGA AAIVVYDIT+ D+F RAK WV+E+QRQA+ ++ + L  NKADL + R V  +E + YA+++ L F+ETSAKTA NVNE+F  IAK+L K  P        R  G+ L      +R    CCS
Sbjct:   16 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYAEDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAAGAPGRNRGVDLQENNPASRSQ--CCS 215          
BLAST of rna-KK1_016107 vs. DB:Swiss
Match: RAB5C_PONAB (Ras-related protein Rab-5C OS=Pongo abelii OX=9601 GN=RAB5C PE=2 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 2.945e-81
Identity = 117/183 (63.93%), Postives = 139/183 (75.96%), Query Frame = 1
Query:   13 GNKSLQAKLVLLGDMGAGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHSLAPMYYRGAAAAIVVYDITSMDSFVRAKKWVREVQRQANASLTMFLVANKADLEADRKVSNEEGEEYAKEHGLSFLETSAKTAQNVNELFYEIAKRLAKANPLRQTGIKLHTR 561
            GNK  Q KLVLLG+   GK+SLVLRFVKGQF EYQESTIGAAF TQ + L++ TVKF+IWDTAGQERYHSLAPMYYRGA AAIVVYDIT+ D+F RAK WV+E+QRQA+ ++ + L  NKADL + R V  +E + YA ++ L F+ETSAKTA NVNE+F  IAK+L K  P   TG     R
Sbjct:   16 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNATGAPGRNR 198          
BLAST of rna-KK1_016107 vs. DB:Swiss
Match: RAB5C_HUMAN (Ras-related protein Rab-5C OS=Homo sapiens OX=9606 GN=RAB5C PE=1 SV=2)

HSP 1 Score: 243.817 bits (621), Expect = 2.945e-81
Identity = 117/183 (63.93%), Postives = 139/183 (75.96%), Query Frame = 1
Query:   13 GNKSLQAKLVLLGDMGAGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQERYHSLAPMYYRGAAAAIVVYDITSMDSFVRAKKWVREVQRQANASLTMFLVANKADLEADRKVSNEEGEEYAKEHGLSFLETSAKTAQNVNELFYEIAKRLAKANPLRQTGIKLHTR 561
            GNK  Q KLVLLG+   GK+SLVLRFVKGQF EYQESTIGAAF TQ + L++ TVKF+IWDTAGQERYHSLAPMYYRGA AAIVVYDIT+ D+F RAK WV+E+QRQA+ ++ + L  NKADL + R V  +E + YA ++ L F+ETSAKTA NVNE+F  IAK+L K  P   TG     R
Sbjct:   16 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNATGAPGRNR 198          
The following BLAST results are available for this feature:
BLAST of rna-KK1_016107 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: C. cajan Asha genome v1.0 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
RHN1_NICPL3.594e-9467.00Ras-related protein RHN1 OS=Nicotiana plumbaginifo... [more]
RAB5_TOBAC7.464e-9365.00Ras-related protein Rab5 OS=Nicotiana tabacum OX=4... [more]
RAF2A_ARATH3.446e-9165.50Ras-related protein RABF2a OS=Arabidopsis thaliana... [more]
RAF2B_ARATH1.680e-8963.50Ras-related protein RABF2b OS=Arabidopsis thaliana... [more]
RAB5A_ORYSJ1.524e-8664.18Ras-related protein Rab5A OS=Oryza sativa subsp. j... [more]
RAB5C_CANLF1.511e-8159.90Ras-related protein Rab-5C OS=Canis lupus familiar... [more]
RAB5C_MOUSE2.640e-8163.93Ras-related protein Rab-5C OS=Mus musculus OX=1009... [more]
RAB5C_BOVIN2.850e-8159.90Ras-related protein Rab-5C OS=Bos taurus OX=9913 G... [more]
RAB5C_PONAB2.945e-8163.93Ras-related protein Rab-5C OS=Pongo abelii OX=9601... [more]
RAB5C_HUMAN2.945e-8163.93Ras-related protein Rab-5C OS=Homo sapiens OX=9606... [more]
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InterPro
Analysis Name: Cajanus cajan Asha genome v1.0
Date Performed: 2019-09-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 11..32
score: 46.31
coord: 149..171
score: 43.01
coord: 34..50
score: 31.1
coord: 52..74
score: 45.38
coord: 114..127
score: 39.91
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 11..174
e-value: 8.3E-76
score: 267.8
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 16..195
e-value: 1.7E-5
score: 28.8
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 8..174
e-value: 6.4E-36
score: 135.3
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 13..174
e-value: 2.9E-12
score: 37.2
NoneNo IPR availableGENE3D3.40.50.300coord: 6..198
e-value: 3.5E-65
score: 221.1
NoneNo IPR availablePROSITEPS51419RABcoord: 6..198
score: 32.142
NoneNo IPR availableCDDcd01860Rab5_relatedcoord: 10..171
e-value: 1.00991E-109
score: 308.712
IPR001806Small GTPasePFAMPF00071Rascoord: 12..171
e-value: 8.7E-61
score: 204.2
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 11..167
e-value: 2.3E-30
score: 103.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 8..182

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-KK1_016107_Cc_Asha_v1.0 ID=rna-KK1_016107_Cc_Asha_v1.0; Name=rna-KK1_016107; organism=Cajanus cajan; type=mRNA; length=600bp
ATGGCTAGGACAGGAAACAAGAGTTTACAAGCAAAACTGGTACTTCTTGG
AGACATGGGAGCAGGGAAGACAAGTTTGGTTCTAAGATTTGTCAAAGGTC
AATTTTCCGAGTACCAGGAATCAACAATTGGAGCAGCATTCTTCACTCAG
GTATTGTCTTTAAATGAAGCCACTGTAAAATTTGATATATGGGACACAGC
AGGGCAAGAACGATACCACAGTTTGGCTCCTATGTACTATCGAGGTGCTG
CTGCTGCCATAGTTGTGTATGACATTACAAGCATGGATTCTTTTGTAAGA
GCAAAGAAGTGGGTTCGAGAAGTACAAAGGCAAGCAAATGCAAGTTTGAC
AATGTTTTTGGTGGCTAACAAGGCTGATTTGGAGGCGGACAGAAAAGTCA
GCAATGAGGAGGGTGAGGAATATGCCAAAGAACATGGCTTATCTTTTCTT
GAAACTTCAGCAAAAACCGCACAGAATGTGAACGAGCTCTTCTATGAAAT
AGCAAAGAGATTGGCGAAAGCTAACCCTTTACGTCAAACTGGAATCAAGC
TGCATACCAGGCCTCGAGAAACTAGAAGAGGATTCTTTTGCTGTTCTTAA
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protein sequence of rna-KK1_016107_Cc_Asha_v1.0

>rna-KK1_016107_Cc_Asha_v1.0 ID=rna-KK1_016107_Cc_Asha_v1.0; Name=rna-KK1_016107_Cc_Asha_v1.0; organism=Cajanus cajan; type=polypeptide; length=199bp
MARTGNKSLQAKLVLLGDMGAGKTSLVLRFVKGQFSEYQESTIGAAFFTQ
VLSLNEATVKFDIWDTAGQERYHSLAPMYYRGAAAAIVVYDITSMDSFVR
AKKWVREVQRQANASLTMFLVANKADLEADRKVSNEEGEEYAKEHGLSFL
ETSAKTAQNVNELFYEIAKRLAKANPLRQTGIKLHTRPRETRRGFFCCS
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mRNA from alignment at Chr_8-CM003610.1:3087704..3090389+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-KK1_016107_Cc_Asha_v1.0 ID=rna-KK1_016107_Cc_Asha_v1.0; Name=rna-KK1_016107; organism=Cajanus cajan; type=mRNA; length=2686bp; location=Sequence derived from: Chr_8-CM003610.1:3087704..3090389+ (Cajanus cajan
ATGGCTAGGACAGGAAACAAGAGTTTACAAGCAAAACTGGTAGGTatgtc tctctctctttttttgatttgatatattaaCGATCAGCTTCATTCAAAAA GTAGAAATAGATCCTGTTTCACATGTTAGGCTCTAAATCAGAACAACATG TTACATATATTAGGACAGGAGATGCAAATAACTTGTATTAGTTATTTGAA TTCAACTTATTTCTTATGTGAAATATGTGTTGGATTCTAAGTTACATATC TGATTTTGATGAATCTCTGCCTGATCAAGTAAATCGTTGGGTTATGTGTG CATTGTTCACCCTTCTCTTCTGAGGGGGCAAATTACACATAAAATCATTC GAGTAGATTAATCACATTTTGCAATGTTGTTGATTGATTAGTTCTAGTTG AATTTTTGCATAATATGTGTGCTTCTTCAATATGCAAACTTAAAGATTAT GTATATATGTCTATCTCCAATTCTCCATCCATTACTTTTTCCCTATGTTT TGAGAAGTTCTATTGTGTAGTAgaagtgaaaaagaagaaaaaatagggag gaaagaaaattataagCAACCAAAATTTCTATATTTCCTCTTTtggttca aatttcaaaattttgttccCTCCCTCATTTTCCTATGATCAAAAGGACAA GCATTATTagcagaaaaaaataattacatctATTATTTGTCCCCAGGTAC TTCTTGGAGACATGGGAGCAGGGAAGACAAGTTTGGTTCTAAGATTTGTC AAAGGTCAATTTTCCGAGTACCAGGTTACTATTATTGTTTTTGTCCCTTA AGTCAGTATTTTAGTCCTCTGTATGATGCCTCCTCAAATCATCATAGATA AGTAGTAGGTAACCATTAATATACGTGTGCAGGAATCAACAATTGGAGCA GCATTCTTCACTCAGGTATTGTCTTTAAATGAAGCCactgtaaaatttga tatatggGACACAGCAGGGCAAGAACGATACCACAGTTTGGCTCCTATGT ACTATCGAGGTGCTGCTGCTGCCATAGTTGTGTATGACATTACAAGCATG GTAACTAAATATCAAGTCTCATTCTCTTCACAAGCTTCATGCGCAGTGGA TGATGATTAATCAATTTGGCAGTTGAAATGtgctataaatataatacaag tGTATCCCTAATTCATGATTATTCTAGTATATTTATCCTTTAAAAGATTC ACTTGTGTTTTACATAGGTATCTATTGtagaatatttaaatacatttacA GTGAACATATCTGACTGATCATACTCTGGCGCAGGATTCTTTTGTAAGAG CAAAGAAGTGGGTTCGAGAAGTACAAAGGCAAGGTAAATACCTATCTTTT CAACAAACATTAGAAGCTATTGAgcttaatataatttgtttgatACTAAA ATCTTGTAAACATGTGGCATGAAGTCTTCCaatgattttagatttttgtG GTTACTAGTTCCAATCAAAACCATCATGTAAATTCAAATGAATTGCACTT GAGGACCAGAGCAATCCACTGATATCTGAACCACATTCCTGCATACTTCG AAGTAGTAAACTTAGGCTAAATTGAGTTCAATATATCATTCTGAGAAAGT TCACCACAACTTCATGATGCGGTACTAATTTGACAATTCACTTCAGCAAA TGCAAGTTTGACAATGTTTTTGGTGGCTAACAAGGCTGATTTGGAGGCGG ACAGAAAAGTCAGCAATGAGGTATATCAAGTGAATTGTTCTATTTGCTTA TTATATTACTTTCAAGGATTCACCTTATTCAATGAGGTACTTGTTGATTA TGActcaaaatttaatgtattatcTCTATATTTTGTAAAGTCTTCGTTtg tatagttttataaatttagtttgtCTCCATTTATCTCATAAGTTCAGATT GTACAtagtttgtttttattaatttgatgagTTCAGTCTATTCTGTTTTA TATGACTTGGTTTCAATGTCTTGGATCCTTATATATTTTTGGGAAACCTT TCTAAGACCGACCCAGAGAGAGAAAACATAAGAGCAAAATTTTAAGTGCG AGTATGGAGATTTGAGAAGAAAATACGtataaaagaaaggaaaggaaaat caACTAGAGATATCAAGGAATTTTTGACAAGAGCAAGAGTCTCTTCTCTA TTGTTTTgatattgcattttttttttctgcatttACGATACATTTTGTTA GGTATTCTAGTTTCTACAGTAGTTTATTCTTCCATAGGGTCTGctcttat ttgttttttttcttgtttcaaaACCAACAATACCCGTCTTTCATACCACG CACTTTGTGTTGATGGTTTCAGGAGGGTGAGGAATATGCCAAAGAACATG GCTTATCTTTTCTTGAAACTTCAGCAAAAACCGCACAGAATGTGAACGAG CTCTTCTATGAAATAGGTAAAATGACATCCCTTTCACCCTTTTTAGTATT TTTGCTAAGAGGCACTTGCATCGTCTCTTCTTGGggtcatattttgttaa attttgcaCTTAATGTGACTTTTGGTTTAGTTTAtacaaaagttaattta taaaaatgatttgttCCTCGAAACAAAAATTGTTGCAGCAAAGAGATTGG CGAAAGCTAACCCTTTACGTCAAACTGGAATCAAGCTGCATACCAGGCCT CGAGAAACTAGAAGAGGATTCTTTTGCTGTTCTTAA
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Coding sequence (CDS) from alignment at Chr_8-CM003610.1:3087704..3090389+

>rna-KK1_016107_Cc_Asha_v1.0 ID=rna-KK1_016107_Cc_Asha_v1.0; Name=rna-KK1_016107; organism=Cajanus cajan; type=CDS; length=1200bp; location=Sequence derived from: Chr_8-CM003610.1:3087704..3090389+ (Cajanus cajan
ATGGCTAGGACAGGAAACAAGAGTTTACAAGCAAAACTGATGGCTAGGAC
AGGAAACAAGAGTTTACAAGCAAAACTGGTACTTCTTGGAGACATGGGAG
CAGGGAAGACAAGTTTGGTTCTAAGATTTGTCAAAGGTCAATTTTCCGAG
TACCAGGTACTTCTTGGAGACATGGGAGCAGGGAAGACAAGTTTGGTTCT
AAGATTTGTCAAAGGTCAATTTTCCGAGTACCAGGAATCAACAATTGGAG
CAGCATTCTTCACTCAGGTATTGTCTTTAAATGAAGCCactgtaaaattt
gatatatggGACACAGCAGGGCAAGAACGATACCACAGTTTGGCTCCTAT
GTACTATCGAGGTGCTGCTGCTGCCATAGTTGTGTATGACATTACAAGCA
TGGAATCAACAATTGGAGCAGCATTCTTCACTCAGGTATTGTCTTTAAAT
GAAGCCactgtaaaatttgatatatggGACACAGCAGGGCAAGAACGATA
CCACAGTTTGGCTCCTATGTACTATCGAGGTGCTGCTGCTGCCATAGTTG
TGTATGACATTACAAGCATGGATTCTTTTGTAAGAGCAAAGAAGTGGGTT
CGAGAAGTACAAAGGCAAGGATTCTTTTGTAAGAGCAAAGAAGTGGGTTC
GAGAAGTACAAAGGCAAGCAAATGCAAGTTTGACAATGTTTTTGGTGGCT
AACAAGGCTGATTTGGAGGCGGACAGAAAAGTCAGCAATGAGCAAATGCA
AGTTTGACAATGTTTTTGGTGGCTAACAAGGCTGATTTGGAGGCGGACAG
AAAAGTCAGCAATGAGGAGGGTGAGGAATATGCCAAAGAACATGGCTTAT
CTTTTCTTGAAACTTCAGCAAAAACCGCACAGAATGTGAACGAGCTCTTC
TATGAAATAGGAGGGTGAGGAATATGCCAAAGAACATGGCTTATCTTTTC
TTGAAACTTCAGCAAAAACCGCACAGAATGTGAACGAGCTCTTCTATGAA
ATAGCAAAGAGATTGGCGAAAGCTAACCCTTTACGTCAAACTGGAATCAA
GCTGCATACCAGGCCTCGAGAAACTAGAAGAGGATTCTTTTGCTGTTCTT
AACAAAGAGATTGGCGAAAGCTAACCCTTTACGTCAAACTGGAATCAAGC
TGCATACCAGGCCTCGAGAAACTAGAAGAGGATTCTTTTGCTGTTCTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity