rna-KK1_016164

BLAST of rna-KK1_016164 vs. DB:Swiss
Match: PP128_ARATH (Pentatricopeptide repeat-containing protein At1g77170, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E21 PE=2 SV=1)

HSP 1 Score: 555.444 bits (1430), Expect = 0.000e+0
Identity = 250/421 (59.38%), Postives = 331/421 (78.62%), Query Frame = 1

Query:   91 NDLVATHLCNCATVRELNRVYGHVLRTHFLISNPAPFNWNNIIRSYTRLEAPRDALRIHVFMLRNGVLPDCYTLPIVLKAVCQVFDVKLGKQLHSVGIKIGLQCNEYCETGFISLYFKAGEFGSARMVFDENPDPKLGSWNAVIGGFSQAGLARDAIRVFIDMRRRGFMPDGVTIVSITSACGNIGDLNLALQLHSKCVFHARGSERTDILMLNSLIDMYGKCGRMDLAYKVFATMEERNVSSWTSMIVGYGMHGHVKEALECFWRMREAGVRPNYVTFIGVLSACVHGGAVQEGRFYFDMMKNVYGITPQLQHYGCMVDLLGRAGLLEEARRMVEEMPMKPNSVVWGCLMGACEKYASVDMAEWVAKHLQELEPWNDGVYVVLSNIYANRGLWKEVERIRSVMKEGRLAKVPAYSLTTNS 1353
            N L+AT L NC ++  + R++G + R+  L   P  F WNNI+RSY R E+P DA+++++ M+R+ VLPD Y+LPIV+KA  Q+ D  LGK+LHSV +++G   +E+CE+GFI+LY KAGEF +AR VFDENP+ KLGSWNA+IGG + AG A +A+ +F+DM+R G  PD  T+VS+T++CG +GDL+LA QLH KCV  A+  E++DI+MLNSLIDMYGKCGRMDLA  +F  M +RNV SW+SMIVGY  +G+  EALECF +MRE GVRPN +TF+GVLSACVHGG V+EG+ YF MMK+ + + P L HYGC+VDLL R G L+EA+++VEEMPMKPN +VWGCLMG CEK+  V+MAEWVA ++ ELEPWNDGVYVVL+N+YA RG+WK+VER+R +MK  ++AK+PAYS  + +
Sbjct:   47 NKLLATLLSNCTSLARVRRIHGDIFRSRILDQYPIAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLH-KCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAYSYASTT 466          

BLAST of rna-KK1_016164 vs. DB:Swiss
Match: PP330_ARATH (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H28 PE=2 SV=2)

HSP 1 Score: 303.908 bits (777), Expect = 5.657e-96
Identity = 154/388 (39.69%), Postives = 235/388 (60.57%), Query Frame = 1

Query:  199 FNWNNIIRSYTRLEAPRDALRIHVFMLRNGVL-PDCYTLPIVLKAVCQVFDVKLGKQLHSVGIKIGLQCNEYCETGFISLYFKAGEFGSARMVFDENPDPKLGSWNAVIGGFSQAGLARDAIRVFIDMRRRGFMPDGVTIVSITSACGNIGDLNLALQLHSKCVFHARGSERTDILMLNSLIDMYGKCGRMDLAYKVFATMEERNVSSWTSMIVGYGMHGHVKEALECFWRMREA-GVRPNYVTFIGVLSACVHGGAVQEGRFYFDMMKNVYGITPQLQHYGCMVDLLGRAGLLEEARRMVEEMPMKPNSVVWGCLMGACEKYASVDMAEWVAKHLQELEPWNDGVYVVLSNIYANRGLWKEVERIRSVMKEGRLAKVPAYSLTTNSN 1356
            F WN +IR Y  +     A  ++  M  +G++ PD +T P ++KAV  + DV+LG+ +HSV I+ G     Y +   + LY   G+  SA  VFD+ P+  L +WN+VI GF++ G   +A+ ++ +M  +G  PDG TIVS+ SAC  IG L L  ++H   V+  +     ++   N L+D+Y +CGR++ A  +F  M ++N  SWTS+IVG  ++G  KEA+E F  M    G+ P  +TF+G+L AC H G V+EG  YF  M+  Y I P+++H+GCMVDLL RAG +++A   ++ MPM+PN V+W  L+GAC  +   D+AE+    + +LEP + G YV+LSN+YA+   W +V++IR  M    + KVP +SL    N
Sbjct:   86 FIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVH---VYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGN 470          

BLAST of rna-KK1_016164 vs. DB:Swiss
Match: PP147_ARATH (Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H44 PE=2 SV=1)

HSP 1 Score: 297.745 bits (761), Expect = 3.386e-93
Identity = 148/380 (38.95%), Postives = 235/380 (61.84%), Query Frame = 1

Query:  199 FNWNNIIRSYTRLEAPRDALRIHVFMLRNGVLPDCYTLPIVLKAVCQVFDVKLGKQLHSVGIKIGLQCNEYCETGFISLYFKAGEFGSARMVFDENPDPKLGSWNAVIGGFSQAGLARDAIRVFIDMRRRGFMPDGVTIVSITSACGNIGDLNLALQLHSKCVFHARGSERTDILMLNSLIDMYGKCGRMDLAYKVFATMEERNVSSWTSMIVGYGMHGHVKEALECFWRMREAGVRPNYVTFIGVLSACVHGGAVQEGRFYFDMMKNVYGITPQLQHYGCMVDLLGRAGLLEEARRMVEEMPMKPNSVVWGCLMGACEKYASVDMAEWVAKHLQELEPWNDGVYVVLSNIYANRGLWKEVERIRSVMKEGRLAKVPAYS 1338
             +W  +I +Y++ +  + AL + V MLR+ V P+ YT   VL++   + DV++   LH   IK GL+ + +  +  I ++ K GE   A  VFDE        WN++IGGF+Q   +  A+ +F  M+R GF+ +  T+ S+  AC  +  L L +Q H   V + +     D+++ N+L+DMY KCG ++ A +VF  M+ER+V +W++MI G   +G+ +EAL+ F RM+ +G +PNY+T +GVL AC H G +++G +YF  MK +YGI P  +HYGCM+DLLG+AG L++A +++ EM  +P++V W  L+GAC    ++ +AE+ AK +  L+P + G Y +LSNIYAN   W  VE IR+ M++  + K P  S
Sbjct:  128 ISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQ-----DLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCS 499          

HSP 2 Score: 92.4337 bits (228), Expect = 1.223e-18
Identity = 64/243 (26.34%), Postives = 112/243 (46.09%), Query Frame = 1

Query:  424 FISLYFKAGEFGSARMVFDENPDPKLGSWNAVIGGFSQAGLARDAIRVFIDMRRRGFMPDGVTIVSITSACGNIGDLNLALQLHSKCVFHARGSERTDILMLNSLIDMYGKCGRMDLAYKVFATMEERNVSSWTSMIVGYGMHGHVKEALECFWRMREAGVRPNYVTFIGVLSACVHGGAVQEGRFYFDMMKNVYGIT--PQLQHYGCMVDLLGRAGLLEEARRMVEEMPMKPNSVVWGCLMG 1146
             I++Y K      A  +FD+ P   + SW  +I  +S+  + + A+ + + M R    P+  T  S+  +C  + D+ +   LH  C     G E +D+ + ++LID++ K G  + A  VF  M   +   W S+I G+  +     ALE F RM+ AG      T   VL AC     ++ G     M  +V+ +     L     +VD+  + G LE+A R+  +M  + + + W  ++ 
Sbjct:  102 LINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRM---LH--CGIIKEGLE-SDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELG-----MQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKER-DVITWSTMIS 332          

HSP 3 Score: 70.0922 bits (170), Expect = 1.463e-11
Identity = 60/248 (24.19%), Postives = 112/248 (45.16%), Query Frame = 1

Query:  517 VIGGFSQAGLARD---AIRVFIDMRRRGFMPDGVTIVSITSAC--------GNIGDLNLALQLHSKCVFHARGSERTDILMLNSLIDMYGKCGRMDLAYKVFATMEERNVSSWTSMIVGYGMHGHVKEALECFWRMREAGVRPNYVTFIGVLSAC--------VHGGAVQEGRFYFDMMKNVYGITPQLQHYGCMVDLLGRAGLLEEARRMVEEMPMKPNSVVWGCLMGACEKYASVDMAEWVAKHLQ 1203
            ++  F++    RD   A++    ++  G   D  T   +   C        GN+   +L    H   +F           ++N LI+MY K   ++ A+++F  M +RNV SWT+MI  Y      ++ALE    M    VRPN  T+  VL +C        +H G ++EG     +  +V+  +        ++D+  + G  E+A  + +EM +  +++VW  ++G   + +  D+A  + K ++
Sbjct:   29 LLSEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMF-----------LVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEG-----LESDVFVRSA-------LIDVFAKLGEPEDALSVFDEM-VTGDAIVWNSIIGGFAQNSRSDVALELFKRMK 252          

BLAST of rna-KK1_016164 vs. DB:Swiss
Match: PP151_ARATH (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1)

HSP 1 Score: 296.204 bits (757), Expect = 6.865e-92
Identity = 163/454 (35.90%), Postives = 250/454 (55.07%), Query Frame = 1

Query:   82 YSGNDLVATHLCNCATVRELNRVYGHVLRTHFLISNPAPFNWNNIIRSYTRLEAPRDALRIHVFMLRNGVLPDCYTLPIVLKAVCQVFDVKLGKQLHSVGIK----------------IGLQC----------------NEYCETGFISLYFKAGEFGSARMVFDENPDPKLGSWNAVIGGFSQAGLARDAIRVFIDMRRRGFMPDGVTIVSITSACGNIGDLNLALQLHSKCVFHA---RGSERTDILMLNSLIDMYGKCGRMDLAYKVFATMEERNVSSWTSMIVGYGMHGHVKEALECFWRMREAGVRPNYVTFIGVLSACVHGGAVQEGRFYFDMMKNVYGITPQLQHYGCMVDLLGRAGLLEEARRMVEEMPMKPNSVVWGCLMGACEKYASVDMAEWVAKHLQELEPWNDGVYVVLSNIYANRGLWKEVERIRSVMKEGRLAKVPAYS 1338
            Y G+ LV  +   C  V +  RV+         + +    +WN++I  + +     +AL +   ML + V PD  TL  V+ A   +  +K+G+++H   +K                +  +C                N   ET  IS Y  A    +AR++F +  +  + SWNA+I G++Q G   +A+ +F  ++R    P   +  +I  AC ++ +L+L +Q H   + H    +  E  DI + NSLIDMY KCG ++  Y VF  M ER+  SW +MI+G+  +G+  EALE F  M E+G +P+++T IGVLSAC H G V+EGR YF  M   +G+ P   HY CMVDLLGRAG LEEA+ M+EEMPM+P+SV+WG L+ AC+ + ++ + ++VA+ L E+EP N G YV+LSN+YA  G W++V  +R  M++  + K P  S
Sbjct:  188 YIGSALVDMY-SKCGNVNDAQRVFDE-------MGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCS 633          

HSP 2 Score: 138.272 bits (347), Expect = 7.126e-34
Identity = 92/350 (26.29%), Postives = 163/350 (46.57%), Query Frame = 1

Query:  202 NWNNIIRSYTRLEAPRDALRIHVFMLRNGVLPDCYTLPIVLKAVCQVFDVKLGKQLHSVGIKIGLQCNEYCETGFISLYFKAGEFGSARMVFDENPDPKLGSWNAVIGGFSQAGLARDAIRVFIDMRRRGFMPDGVTIVSITSACGNIGDLNLALQLHSKCVFHARGSERTDILMLNSLIDMYGKCGRMDLAYKVFAT-------------------------------MEERNVSSWTSMIVGYGMHGHVKEALECFWRMREAGVRPNYVTFIGVLSACVHGGAVQEG-RFYFDMMKNVY----GITPQLQHYGCMVDLLGRAGLLEEARRMVEEMPMKPNSVVWGCLM 1143
             WN+++  + + +   +AL     M + G + + Y+   VL A   + D+  G Q+HS+  K     + Y  +  + +Y K G    A+ VFDE  D  + SWN++I  F Q G A +A+ VF  M      PD VT+ S+ SAC ++  + +  ++H + V + +   R DI++ N+ +DMY KC R+  A  +F +                               M ERNV SW ++I GY  +G  +EAL  F  ++   V P + +F  +L AC     +  G + +  ++K+ +    G    +     ++D+  + G +EE   +  +M M+ + V W  ++
Sbjct:  119 TWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDK--LRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM-MERDCVSWNAMI 465          

HSP 3 Score: 129.798 bits (325), Expect = 5.874e-31
Identity = 85/303 (28.05%), Postives = 141/303 (46.53%), Query Frame = 1

Query:  361 KQLHSVGIKIGLQCNEYCETGFISLYFKAGEFGSARMVFDENPD-------------PKLG------------------SWNAVIGGFSQAGLARDAIRVFIDMRRRGFMPDGVTIVSITSACGNIGDLNLALQLHSKCVFHARGSERTDILMLNSLIDMYGKCGRMDLAYKVFATMEERNVSSWTSMIVGYGMHGHVKEALECFWRMREAGVRPNYVTFIGVLSACVHGGAVQEGRFYFDMMKNVYGITPQLQHYGCMVDLLGRAGLLEEARRMVEEMPMK----PNSVVWGCLMGACEKYA 1164
            + +H+  IK G     + +   I  Y K G     R VFD+ P               KLG                  +WN+++ GF+Q     +A+  F  M + GF+ +  +  S+ SAC  + D+N  +Q+HS     A+    +D+ + ++L+DMY KCG ++ A +VF  M +RNV SW S+I  +  +G   EAL+ F  M E+ V P+ VT   V+SAC    A++ G+     +     +   +      VD+  +   ++EAR + + MP++      S++ G  M A  K A
Sbjct:   40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHS---LIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAA 339          

BLAST of rna-KK1_016164 vs. DB:Swiss
Match: PP425_ARATH (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H38 PE=2 SV=1)

HSP 1 Score: 294.278 bits (752), Expect = 9.140e-92
Identity = 155/429 (36.13%), Postives = 239/429 (55.71%), Query Frame = 1

Query:  199 FNWNNIIRSYTRLEAPRDALRIHVF---MLRNGVLPDCYTLPIVLKAVCQVFDVKLGKQLHSVGIKIGLQCNEYCETGFISL---------------------------------------------YFKAGEFGSARMVFDENPDPKLGSWNAVIGGFSQAGLARDAIRVFIDMRRRGFMPDGVTIVSITSACGNIGDLNLALQLHSKCVFHARGSERTDILMLNSLIDMYGKCGRMDLAYKVFATMEERNVSSWTSMIVGYGMHGHVKEALECFWRMREAGVRPNYVTFIGVLSACVHGGAVQEGRFYFDMMKNVYGITPQLQHYGCMVDLLGRAGLLEEARRMVEEMPMKPNSVVWGCLMGACEKYASVDMAEWVAKHLQELEPWNDGVYVVLSNIYANRGLWKEVERIRSVMKEGRLAKVPAYSL 1341
            F+WN IIR ++  +  +  + I +F   M    V P+ +T P VLKA  +   ++ GKQ+H + +K G   +E+  +  + +                                             Y + G+  +ARM+FD+     + SWN +I G+S  G  +DA+ VF +M++    P+ VT+VS+  A   +G L L   LH   ++      R D ++ ++LIDMY KCG ++ A  VF  +   NV +W++MI G+ +HG   +A++CF +MR+AGVRP+ V +I +L+AC HGG V+EGR YF  M +V G+ P+++HYGCMVDLLGR+GLL+EA   +  MP+KP+ V+W  L+GAC    +V+M + VA  L ++ P + G YV LSN+YA++G W EV  +R  MKE  + K P  SL
Sbjct:   91 FSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLH---LYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSL 516          

BLAST of rna-KK1_016164 vs. DB:Swiss
Match: PP145_ARATH (Pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H26 PE=2 SV=2)

HSP 1 Score: 290.812 bits (743), Expect = 6.490e-91
Identity = 141/387 (36.43%), Postives = 237/387 (61.24%), Query Frame = 1

Query:  181 ISNPAPFNWNNIIRSYTRLEAPRDALRIHVFMLRNGVLPDCYTLPIVLKAVCQVFDVKLGKQLHSVGIKIGLQCNEYCETGFISLYFKAGEFGSARMVFDENPDPKLGSWNAVIGGFSQAGLARDAIRVFIDMRRRGFMPDGVTIVSITSACGNIGDLNLALQLHSKCVFHARGSERTDILMLNS-LIDMYGKCGRMDLAYKVFATMEERNVSSWTSMIVGYGMHGHVKEALECFWRMREAGVRPNYVTFIGVLSACVHGGAVQEGRFYFDMMKNVYGITPQLQHYGCMVDLLGRAGLLEEARRMVEEMPMKPNSVVWGCLMGACEKYASVDMAEWVAKHLQELEPWNDGVYVVLSNIYANRGLWKEVERIRSVMKEGRLAKVPAYS 1338
            +S P    +N++ R Y+R   P +   + V +L +G+LPD YT P +LKA      ++ G+QLH + +K+GL  N Y     I++Y +  +  SAR VFD   +P +  +NA+I G+++     +A+ +F +M+ +   P+ +T++S+ S+C  +G L+L   +H     +A+       + +N+ LIDM+ KCG +D A  +F  M  ++  +W++MIV Y  HG  ++++  F RMR   V+P+ +TF+G+L+AC H G V+EGR YF  M + +GI P ++HYG MVDLL RAG LE+A   ++++P+ P  ++W  L+ AC  + ++D+AE V++ + EL+  + G YV+LSN+YA    W+ V+ +R VMK+ +  KVP  S
Sbjct:   89 MSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHK----YAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCS 471          

HSP 2 Score: 93.9745 bits (232), Expect = 3.360e-19
Identity = 64/240 (26.67%), Postives = 118/240 (49.17%), Query Frame = 1

Query:  463 ARMVFDENPDPKLGSWNAVIGGFSQAGLARDAIRVFIDMRRRGFMPDGVTIVSITSACGNIGDLNLALQLHSKCVFHARGSERTDILMLNSLIDMYGKCGRMDLAYKVFATMEERNVSSWTSMIVGYGMHGHVKEALECFWRMREAGVRPNYVTFIGVLSACVHGGAVQEGRFYFDMMKNVYGITPQLQHYGCMVDLLGRAGLLEEARRMVEEMPMKPNSVVWGCLMGACEKYASVDMAE 1182
            AR +F+   +P +  +N++  G+S+     +   +F+++   G +PD  T  S+  AC     L    QLH  C+    G +  ++ +  +LI+MY +C  +D A  VF  + E  V  + +MI GY       EAL  F  M+   ++PN +T + VLS+C   G++  G++     K  +     ++    ++D+  + G L++A  + E+M  K ++  W  ++ A   YA+   AE
Sbjct:   82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLH--CLSMKLGLD-DNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKK-HSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYK-DTQAWSAMIVA---YANHGKAE 313          

BLAST of rna-KK1_016164 vs. DB:Swiss
Match: PP140_ARATH (Pentatricopeptide repeat-containing protein At2g01510, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H37 PE=3 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 1.608e-90
Identity = 155/389 (39.85%), Postives = 228/389 (58.61%), Query Frame = 1

Query:  181 ISNPAPFNWNNIIRSYTRLEAPRDALRIHVFMLRNGVLPDCYTLPIVLKAVCQVFDVKLGKQLHSVGIKIGLQCNEYCETGFISLYFKAGEFGSARMVFDENPDPKLGSWNAVIGGFSQAGLARDAIRVFIDMRRRGFMPDGVTIVSITSACGNIGDLNLALQLHSKCVFHARGSE-RTDILMLNSLIDMYGKCGRMDLAYKVFATMEERNVSSWTSMIVGYGMHGHVKEALECFWRMREAGVRPNYVTFIGVLSACVHGGAVQEGRFYFDMM--KNVYGITPQLQHYGCMVDLLGRAGLLEEARRMVEEMPMKPNSVVWGCLMGACEKYASVDMAEWVAKHLQELEPWNDGVYVVLSNIYANRGLWKEVERIRSVMKEGRLAKVPAYS 1338
            +  P  F WN + + Y R + P ++L ++  M   GV PD +T P V+KA+ Q+ D   G  LH+  +K G  C     T  + +Y K GE  SA  +F+      L +WNA +    Q G +  A+  F  M       D  T+VS+ SACG +G L +  +++ +    AR  E   +I++ N+ +DM+ KCG  + A  +F  M++RNV SW++MIVGY M+G  +EAL  F  M+  G+RPNYVTF+GVLSAC H G V EG+ YF +M   N   + P+ +HY CMVDLLGR+GLLEEA   +++MP++P++ +WG L+GAC  +  + + + VA  L E  P     +V+LSNIYA  G W  V+++RS M++    KV AYS
Sbjct:   69 MHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDR----ARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYS 453          

HSP 2 Score: 90.8929 bits (224), Expect = 3.597e-18
Identity = 65/261 (24.90%), Postives = 120/261 (45.98%), Query Frame = 1

Query:  361 KQLHSVGIKIGLQCNEYCETGFISLYFKAGEFGSARMVFDENPDPKLGSWNAVIGGFSQAGLARDAIRVFIDMRRRGFMPDGVTIVSITSACGNIGDLNLALQLHSKCVFHARGSERTDILMLNSLIDMYGKCGRMDLAYKVFATMEERNVSSWTSMIVGYGMHGHVKEALECFWRMREAGVRPNYVTFIGVLSACVHGGAVQEGRFYFDMMKNVYGITPQLQHYGCMVDLLGRAGLLEEARRMVEEMPMKPNSVVWGCLM 1143
            K++H++ ++ G        T  +      G+   AR VFDE   P++  WN +  G+ +  L  +++ ++  MR  G  PD  T   +  A   +GD +    LH+  V +  G      ++   L+ MY K G +  A  +F +M+ +++ +W + +      G+   ALE F +M    V+ +  T + +LSAC   G+++ G   +D  +    I   +      +D+  + G  E AR + EEM  + N V W  ++
Sbjct:   28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLG---IVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARK-EEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQR-NVVSWSTMI 283          

BLAST of rna-KK1_016164 vs. DB:Swiss
Match: PP165_ARATH (Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E78 PE=2 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 8.256e-90
Identity = 152/424 (35.85%), Postives = 236/424 (55.66%), Query Frame = 1

Query:  181 ISNPAPFNWNNIIRSYTRLEAPRDALRIHVFMLRNGV-LPDCYTLPIVLKAVCQVFDVKLGKQLHSVGIKIGLQCNEYCETGFISLYFKAGEFGSARMVFDENPDPKLGSWNAVIGGFSQAGLAR-------------------------------DAIRVFIDMRRRGFMPDGVTIVSITSACGNIGDLNLALQLHSKCVFHARGSERTDILMLNSLIDMYGKCGRMDLAYKVFATMEERNVSSWTSMIVGYGMHGHVKEALECFWRMREAGVRPNYVTFIGVLSACVHGGAVQEGRFYFDMMKNVYGITPQLQHYGCMVDLLGRAGLLEEARRMVEEMPMKPNSVVWGCLMGACEKYASVDMAEWVAKHLQELEPWNDGVYVVLSNIYANRGLWKEVERIRSVMKEGRLAKVPAYSLTTNSN 1356
            +SNP  F +N+IIR+YT      D +RI+  +LR    LPD +T P + K+   +    LGKQ+H    K G + +   E   I +Y K  +   A  VFDE  +  + SWN+++ G+++ G  +                               +A+  F +M+  G  PD ++++S+  +C  +G L L   +H   ++  R        + N+LI+MY KCG +  A ++F  ME ++V SW++MI GY  HG+   A+E F  M+ A V+PN +TF+G+LSAC H G  QEG  YFDMM+  Y I P+++HYGC++D+L RAG LE A  + + MPMKP+S +WG L+ +C    ++D+A     HL ELEP + G YV+L+NIYA+ G W++V R+R +++   + K P  SL   +N
Sbjct:   68 VSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIH---LYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNN 488          

BLAST of rna-KK1_016164 vs. DB:Swiss
Match: PP224_ARATH (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H43 PE=2 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 2.417e-89
Identity = 146/374 (39.04%), Postives = 225/374 (60.16%), Query Frame = 1

Query:  202 NWNNIIRSYTRLEAPRDALRIHVFMLRNGVLPDCYTLPIVLKAVCQVFDVKLGKQLHSVGIKIGLQCNEYCETGFISLYFKAGEFGSARMVFDENPDPKLGSWNAVIGGFSQAGLARDAIRVFIDMRRRGFMPDGVTIVSITSACGNIGDLNLALQLHSKCVFHARGSERTDILMLNSLIDMYGKCGRMDLAYKVFATMEERNVSSWTSMIVGYGMHGHVKEALECFWRMREAGVRPNYVTFIGVLSACVHGGAVQEGRFYFDMMKNVYGITPQLQHYGCMVDLLGRAGLLEEARRMVEEMPMKPNSVVWGCLMGACEKYASVDMAEWVAKHLQELEPWNDGVYVVLSNIYANRGLWKEVERIRSVMKEGRLAK 1323
            +W  I+ +Y +   P +AL I   M +  V PD   L  VL A   + D+K G+ +H+  +K+GL+          ++Y K G+  +A+++FD+   P L  WNA+I G+++ G AR+AI +F +M  +   PD ++I S  SAC  +G L  A  ++    +  R   R D+ + ++LIDM+ KCG ++ A  VF    +R+V  W++MIVGYG+HG  +EA+  +  M   GV PN VTF+G+L AC H G V+EG ++F+ M + + I PQ QHY C++DLLGRAG L++A  +++ MP++P   VWG L+ AC+K+  V++ E+ A+ L  ++P N G YV LSN+YA   LW  V  +R  MKE  L K
Sbjct:  189 SWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYE---YVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNK 558          

HSP 2 Score: 167.548 bits (423), Expect = 4.669e-44
Identity = 96/324 (29.63%), Postives = 172/324 (53.09%), Query Frame = 1

Query:  181 ISNPAPFNWNNIIRSYTRLEAPRDALRIHVFMLRNGVLPDCYTLPIVLKAVCQVFDVKLGKQLHSVGIKIGLQCNEYCETGFISLYFKAGEFGSARMVFDENPDPK--LGSWNAVIGGFSQAGLARDAIRVFIDMRRRGFMPDGVTIVSITSACGNIGDLNLALQLHSKCVFHARGSERTDILMLNSLIDMYGKCGRMDLAYKVFATMEERNVSSWTSMIVGYGMHGHVKEALECFWRMREAGVRPNYVTFIGVLSACVHGGAVQEGRFYFDMM-KNVYGITPQLQHYGCMVDLLGRAGLLEEARRMVEEMPMKPNSVVWGCLM 1143
            +  P  F WN IIR Y+R    +DAL ++  M    V PD +T P +LKA   +  +++G+ +H+   ++G   + + + G I+LY K    GSAR VF+  P P+  + SW A++  ++Q G   +A+ +F  MR+    PD V +VS+ +A   + DL     +H+  V      E   ++ LN+   MY KCG++  A  +F  M+  N+  W +MI GY  +G+ +EA++ F  M    VRP+ ++    +SAC   G++++ R  ++ + ++ Y     +     ++D+  + G +E A R+V +  +  + VVW  ++
Sbjct:   79 LPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNT---MYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFIS--SALIDMFAKCGSVEGA-RLVFDRTLDRDVVVWSAMI 396          

HSP 3 Score: 127.487 bits (319), Expect = 3.442e-30
Identity = 92/344 (26.74%), Postives = 161/344 (46.80%), Query Frame = 1

Query:  361 KQLHSVGIKIGLQCNEYCETGFISLYFKAGEFGSARMVFDENPDPKLGSWNAVIGGFSQAGLARDAIRVFIDMRRRGFMPDGVTIVSITSACGNIGDLNLALQLHSKCVFHARGSERTDILMLNSLIDMYGKCGRMDLAYKVFA--TMEERNVSSWTSMIVGYGMHGHVKEALECFWRMREAGVRPNYVTFIGVLSA-----------CVHGGAVQEG------------------------RFYFDMMKNVYGITPQLQHYGCMVDLLGRAGLLEEARRMVEEM---PMKPNSVVWGCLMGACEKYASVDMAEWVAKHLQELEPWNDGVYV--VLSNIYANRG 1266
            KQ+H+  + +GLQ + +  T  I      G+   AR VFD+ P P++  WNA+I G+S+    +DA+ ++ +M+     PD  T   +  AC  +  L +   +H++ VF  R     D+ + N LI +Y KC R+  A  VF    + ER + SWT+++  Y  +G   EALE F +MR+  V+P++V  + VL+A            +H   V+ G                        +  FD MK     +P L  +  M+    + G   EA  M  EM    ++P+++     + AC +  S++ A  + +++   + + D V++   L +++A  G
Sbjct:   38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQ-VF--RLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMK-----SPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSD-YRDDVFISSALIDMFAKCG 372          

HSP 4 Score: 89.7373 bits (221), Expect = 1.006e-17
Identity = 56/229 (24.45%), Postives = 107/229 (46.72%), Query Frame = 1

Query:  181 ISNPAPFNWNNIIRSYTRLEAPRDALRIHVFMLRNGVLPDCYTLPIVLKAVCQVFDVKLGKQLHSVGIKIGLQCNEYCETGFISLYFKAGEFGSARMVFDENPDPKLGSWNAVIGGFSQAGLARDAIRVFIDMRRRGFMPDGVTIVSITSACGNIGDLNLALQLHSKCVFHARGSERTDILMLNSLIDMYGKCGRMDLAYKVFATME-ERNVSSWTSMIVGYGMHGHVK 864
            + +P    WN +I  Y +    R+A+ +   M+   V PD  ++   + A  QV  ++  + ++    +   + + +  +  I ++ K G    AR+VFD   D  +  W+A+I G+   G AR+AI ++  M R G  P+ VT + +  AC + G +       ++   H    ++        +ID+ G+ G +D AY+V   M  +  V+ W +++     H HV+
Sbjct:  283 MKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQH---YACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVE 508          

BLAST of rna-KK1_016164 vs. DB:Swiss
Match: PPR85_ARATH (Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H51 PE=1 SV=2)

HSP 1 Score: 286.189 bits (731), Expect = 1.169e-88
Identity = 162/406 (39.90%), Postives = 235/406 (57.88%), Query Frame = 1

Query:  157 HVLRTHFLISNPAPFNWNNIIRSYTR-LEAPRDALRIHVFMLRNG-VLPDCYTLPIVLKAVCQVFDVKLGKQLHSVGIKIGLQCNEYCETGFISLYFKAGEFGSARMVFDENPDPKLGSWNAVIGGFSQAGLARDAIRVFIDMRRRGFMPDGVTIVSITSACGNIGDLNLALQLHSKCVFHARGSERTDILMLNSLIDMYGKCGRMDLAYKVFATMEERNVSSWTSMIVGYGMHGHVKEALECFWRM--REAGVRPNYVTFIGVLSACVHGGAVQEGRFYFDMMKNVYGITPQLQHYGCMVDLLGRAGLLEEARRMVEEMPMKPNSVVWGCLMGA-CEKYASVDMAEWVAKHLQELEPWND-------GVYVVLSNIYANRGLWKEVERIRSVMKEGRLAKVPAYS 1338
            +  R    I N + F WN +IR+    +    +A  ++  ML  G   PD +T P VLKA   +F    GKQ+H   +K G   + Y   G I LY   G    AR VFDE P+  L SWN++I    + G    A+++F +M+R  F PDG T+ S+ SAC  +G L+L    H+  +         D+L+ NSLI+MY KCG + +A +VF  M++R+++SW +MI+G+  HG  +EA+  F RM  +   VRPN VTF+G+L AC H G V +GR YFDMM   Y I P L+HYGC+VDL+ RAG + EA  MV  MPMKP++V+W  L+ A C+K ASV+++E +A+++   +  N+       G YV+LS +YA+   W +V  +R +M E  + K P  S
Sbjct:  101 YAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR-SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCS 505          

HSP 2 Score: 57.7658 bits (138), Expect = 1.265e-7
Identity = 54/223 (24.22%), Postives = 103/223 (46.19%), Query Frame = 1

Query:  613 IVSITSACGNIGDLNLALQLHSKCVFHARGSERTDILMLNSLIDMYGKCGRMDLAYKVFATMEERNVSSWTSMIVGYGMH-GHVKEALECFWRMREAG-VRPNYVTFIGVLSACVHGGAVQEGR-FYFDMMKNVYGITPQLQHYGCMVDLLGRAGLLEEARRMVEEMPMKPNSVVWGCLMGACEKYASVDMAEWVAKHLQ-ELEPWNDGVYVVLSNIYANRGL 1269
            I S+   C ++  L    QLH+  +      E   + +   ++ +      ++ A++VF ++E  +   W ++I          +EA   + +M E G   P+  TF  VL AC +     EG+  +  ++K+ +G    + +   ++ L G  G L+ AR++ +EMP + + V W  ++ A  ++   D A  + + +Q   EP  DG Y + S + A  GL
Sbjct:   51 IFSLAETCSDMSQLK---QLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNN--GLIHLYGSCGCLDLARKVFDEMPER-SLVSWNSMIDALVRFGEYDSALQLFREMQRSFEP--DG-YTMQSVLSACAGL 264